>CCD41_HUMAN (Q9Y592) Coiled-coil domain-containing protein 41 (NY-REN-58|
           antigen)
          Length = 693

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 21/67 (31%), Positives = 34/67 (50%)
 Frame = +3

Query: 417 QMQFLETLLQRNLRFEHFQKLHLSAQSNLTNLQNKKGGYCFLTSSIFNEEHATQKGPLQE 596
           Q +F + L+   LR EH +  + + ++  T LQN+          +FNE+  TQ+  LQ 
Sbjct: 20  QSEFQKMLIDERLRCEHHKANYQTLKAEHTRLQNEHVKLQNELKHLFNEKQ-TQQEKLQL 78

Query: 597 LIRSLHG 617
           L+  L G
Sbjct: 79  LLEELRG 85

>LAMB1_DROME (P11046) Laminin beta-1 chain precursor (Laminin B1 chain)|
          Length = 1790

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
 Frame = -2

Query: 487  DKCSFWKCSK---RKFLCRRVSRNCICFSGTAKVFS*TACTRGHLGQLYQGKHC 335
            +KC   +C +     F C R + NC+C  G    +    C RG++GQ     HC
Sbjct: 1139 EKCQPCECDQFGAADFQCDRETGNCVCHEGIGG-YKCNECARGYIGQF---PHC 1188

>RADA_HAEIN (P45266) DNA repair protein radA homolog (DNA repair protein sms|
           homolog)
          Length = 458

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -3

Query: 345 ASIAKEV*ACLDCGAEFGSW--HCSSCSLFST 256
           A   K    C DCGAEF  W   CS+C  ++T
Sbjct: 2   AKAPKTAYVCNDCGAEFSRWQGQCSACKAWNT 33

>SYD_CARHZ (Q3AA17) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 592

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -3

Query: 498 LIVLINAASGSVRSANFFVGESPETASASLG-LPRYLVERL 379
           L  LINA  G      FFV + PE A+ +LG L  +L ERL
Sbjct: 377 LRALINALQGEPGDILFFVADKPEVAAQALGNLRLHLAERL 417

>RBP2_MOUSE (Q9ERU9) Ran-binding protein 2 (RanBP2)|
          Length = 3053

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 336  AKEV*ACLDCGAEFGSWHCSSCSL 265
            AK+  AC + G +F  WHCS CS+
Sbjct: 1486 AKKCVACENPGKQFKEWHCSLCSV 1509

>YS31_CAEEL (Q09368) Hypothetical protein ZK1321.1|
          Length = 158

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 19/77 (24%)
 Frame = +1

Query: 397 PWQSQRSRCSFWR-LSYKEICA-----SNTSRSC-------------IYQHNQTLPICKI 519
           PW+S R RCS    L+ K  C      SN   +C             I++H   LP  K 
Sbjct: 57  PWESVRLRCSCGDPLATKSACGRKHGNSNQKLACFRLPDPCLREYAVIFEHGVPLPPSKP 116

Query: 520 RKVVTAF*RAASSTKNT 570
            ++VTA  +  ++++N+
Sbjct: 117 HRIVTAVRKTVTTSRNS 133

>MEGF6_HUMAN (O75095) Multiple epidermal growth factor-like domains 6 precursor|
           (EGF-like domain-containing protein 3) (Multiple
           EGF-like domain protein 3)
          Length = 1229

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 30/118 (25%), Positives = 43/118 (36%), Gaps = 1/118 (0%)
 Frame = -2

Query: 652 CSLSVPPTPSPAPCKLRISSCRGPFCVACSSLKMLLVKKQ*PPFLFCKLVRFDCADKCSF 473
           CSL+     +   C L +  C  P          L+  +  PP  F K         CSF
Sbjct: 415 CSLTCDDCRNGGTCLLGLDGCDCP-----EGWTGLICNETCPPDTFGK--------NCSF 461

Query: 472 WKCSKRKFLCRRVSRNCICFSGTAKVFS*TACTRGHLGQLYQGKHCKRGVS-LSRLRC 302
               +    C  V+  C C  G +       C +G     Y GKHC++  +  +R RC
Sbjct: 462 SCSCQNGGTCDSVTGACRCPPGVSGTNCEDGCPKG-----YYGKHCRKKCNCANRGRC 514

>GFPT1_MOUSE (P47856) Glucosamine--fructose-6-phosphate aminotransferase|
           [isomerizing] 1 (EC 2.6.1.16) (Hexosephosphate
           aminotransferase 1) (D-fructose-6-phosphate
           amidotransferase 1) (GFAT 1) (GFAT1)
          Length = 696

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 21/54 (38%), Positives = 28/54 (51%)
 Frame = -3

Query: 450 FFVGESPETASASLGLPRYLVERLAPEVIWGNYTRASIAKEV*ACLDCGAEFGS 289
           FF+ +S ETA   +GL RY  ER A  V   N   +SI++E     DCG    +
Sbjct: 433 FFISQSGETADTLMGL-RYCKERGALTVGITNTVGSSISRET----DCGVHINA 481

>ATM_ASHGO (Q751J3) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)|
            (DNA-damage checkpoint kinase TEL1) (Telomere length
            regulation protein 1) (ATM homolog)
          Length = 2768

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
 Frame = -2

Query: 454  KFLCRRVSRNCICFSGTAKVFS*TACTRGHLGQLYQGKHCKRGVSLSRLRCRVRQLALFF 275
            KF+C+ +  N +  S    + + TA T+   GQL       + V L         LALFF
Sbjct: 1529 KFICQCI--NAVSLSHKDSLSTFTADTQQFFGQL-----SSKSVPLD--------LALFF 1573

Query: 274  MLFVLNLSPTCFPDMLLLNRDAAPSPYSAF---LTVCPIELLSSIQVRYLPVSSYMPLLL 104
             +F ++           L+  A  S YS++   LT+  +++L     RY+PV     +L 
Sbjct: 1574 YMFPISNPSESMETFCRLHYPALTSDYSSWLVKLTMFALDMLG----RYIPVVKCFEVLA 1629

Query: 103  DATYS 89
             A  S
Sbjct: 1630 TAITS 1634

>GFPT1_HUMAN (Q06210) Glucosamine--fructose-6-phosphate aminotransferase|
           [isomerizing] 1 (EC 2.6.1.16) (Hexosephosphate
           aminotransferase 1) (D-fructose-6-phosphate
           amidotransferase 1) (GFAT 1) (GFAT1)
          Length = 698

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 21/54 (38%), Positives = 28/54 (51%)
 Frame = -3

Query: 450 FFVGESPETASASLGLPRYLVERLAPEVIWGNYTRASIAKEV*ACLDCGAEFGS 289
           FF+ +S ETA   +GL RY  ER A  V   N   +SI++E     DCG    +
Sbjct: 435 FFLSQSGETADTLMGL-RYCKERGALTVGITNTVGSSISRET----DCGVHINA 483


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,760,549
Number of Sequences: 219361
Number of extensions: 2020787
Number of successful extensions: 6187
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6186
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)