ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal15n07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470140.1| Oryza sativa (japonica cultivar-group), mRNA 176 6e-41
2dbj|AK072450.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 6e-41
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 109 1e-20
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
5gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic ... 109 1e-20
6gb|AY110817.1| Zea mays CL15151_1 mRNA sequence 74 6e-10
7gb|CP000249.1| Frankia sp. CcI3, complete genome 48 0.036
8dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 46 0.14
9gb|AC163102.5| Mus musculus chromosome 18, clone RP23-270E10, co... 44 0.56
10gb|BC040364.1| Mus musculus dystrobrevin alpha, transcript varia... 44 0.56
11gb|BC050765.1| Mus musculus dystrobrevin alpha, mRNA (cDNA clone... 44 0.56
12gb|AC145084.6| Mus musculus chromosome 18, clone RP24-175N20, co... 44 0.56
13ref|NM_207650.3| Mus musculus dystrobrevin alpha (Dtna), transcr... 44 0.56
14emb|X95226.1|MMDYSTM24 M.musculus mRNA for dystrobrevin (clone m24) 44 0.56
15dbj|AK131649.1| Mus musculus adult male cerebellum cDNA, RIKEN f... 44 0.56
16dbj|AK135910.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 44 0.56
17dbj|AK147359.1| Mus musculus cDNA, RIKEN full-length enriched li... 44 0.56
18dbj|AK147279.1| Mus musculus cDNA, RIKEN full-length enriched li... 44 0.56
19dbj|AK019477.1| Mus musculus 0 day neonate skin cDNA, RIKEN full... 44 0.56
20ref|XM_226109.3| PREDICTED: Rattus norvegicus similar to dystrob... 44 0.56
21emb|Z79806.1|MMDBNEX20 M.musculus dystrobrevin gene, exon 20 44 0.56
22emb|AL731548.13| Mouse DNA sequence from clone RP23-71M18 on chr... 44 0.56
23gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 2.2
24gb|AC105230.10| Homo sapiens chromosome 8, clone RP11-699F21, co... 42 2.2
25gb|AC012215.11| Homo sapiens chromosome , clone RP11-345N15, com... 42 2.2
26gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete s... 42 2.2
27gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 42 2.2
28dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 42 2.2
29ref|NM_128831.2| Arabidopsis thaliana B5 #4 AT2G32720 (B5 #4) mR... 40 8.8
30gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 8.8
31gb|BC059541.1| Danio rerio endothelial differentiation-related f... 40 8.8
32gb|AC127592.6| Mus musculus BAC clone RP23-330A5 from chromosome... 40 8.8
33gb|AC117184.3| Mus musculus BAC clone RP23-37L10 from chromosome... 40 8.8
34ref|XM_923836.2| PREDICTED: Mus musculus zinc finger protein 694... 40 8.8
35ref|XM_915604.2| PREDICTED: Mus musculus zinc finger protein 694... 40 8.8
36ref|XM_983013.1| PREDICTED: Mus musculus zinc finger protein 694... 40 8.8
37ref|XM_982976.1| PREDICTED: Mus musculus zinc finger protein 694... 40 8.8
38ref|XM_622104.3| PREDICTED: Mus musculus zinc finger protein 694... 40 8.8
39ref|XM_894621.2| PREDICTED: Mus musculus zinc finger protein 694... 40 8.8
40gb|AC124565.2| Mus musculus BAC clone RP23-143I23 from 16, compl... 40 8.8
41gb|BC054371.1| Mus musculus zinc finger protein 694, transcript ... 40 8.8
42gb|BC028272.1| Mus musculus zinc finger protein 694, transcript ... 40 8.8
43emb|AL355316.12| Human DNA sequence from clone RP11-82L9 on chro... 40 8.8
44emb|AL139343.9| Human DNA sequence from clone RP5-1078M7 on chro... 40 8.8
45gb|BT000085.1| Arabidopsis thaliana putative cytochrome b5 (At2g... 40 8.8
46emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete ... 40 8.8
47emb|AL669827.5| Mouse DNA sequence from clone RP23-350D17 on chr... 40 8.8
48gb|AY128405.1| Arabidopsis thaliana putative cytochrome b5 (At2g... 40 8.8
49gb|AC108937.4| Homo sapiens BAC clone RP11-679I19 from 4, comple... 40 8.8
50gb|AC003974.3| Arabidopsis thaliana chromosome 2 clone F24L7 map... 40 8.8
51gb|AC093841.3| Homo sapiens BAC clone RP11-438F11 from 4, comple... 40 8.8
52dbj|AK034954.1| Mus musculus 12 days embryo embryonic body betwe... 40 8.8
53dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
54emb|BX821782.1|CNS0A99H Arabidopsis thaliana Full-length cDNA Co... 40 8.8
55ref|NM_200745.1| Danio rerio endothelial differentiation-related... 40 8.8
56ref|XM_218444.3| PREDICTED: Rattus norvegicus similar to FKSG27 ... 40 8.8
57gb|AC131958.1| Homo sapiens BAC clone RP11-62O19 from 2, complet... 40 8.8
58dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
59gb|BC071480.1| Danio rerio endothelial differentiation-related f... 40 8.8
60emb|AL772310.27| Mouse DNA sequence from clone RP23-34B24 on chr... 40 8.8
61gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta... 40 8.8
62gb|M10296.1|MUSIR3E1 Mouse DNA with homology to EBV IR3 repeat, ... 40 8.8 
>ref|XM_470140.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2361

 Score =  176 bits (89), Expect = 6e-41
 Identities = 215/257 (83%)
 Strand = Plus / Minus

                                                                        
Query: 390  gctcctgctcccctcccctgcctggattagtgaactgtctcgaggcttcttgcatcgaga 449
            |||| |||| || ||||||||||| |||| |||| | |  || |||||||  ||| | | 
Sbjct: 1658 gctcttgctgccttcccctgcctgtattactgaaatattacgcggcttctcacattgcgg 1599

                                                                        
Query: 450  gcagttgcatttgccgccgaggaaagctgggacgatctgtaagaactcggctaacgtctt 509
            |||| |||||||||| || || |||| ||| || ||||| |||||||||||||| |||||
Sbjct: 1598 gcagctgcatttgccaccaagaaaagttggcacaatctgcaagaactcggctaatgtctt 1539

                                                                        
Query: 510  cttgtacgattccccctcgaaacgcagcttctgctttgtggatggtttcaggagttgaat 569
            ||| || ||||| ||||| ||||||| |||||||||||||||||||||||| |  |||||
Sbjct: 1538 cttatatgattctccctcaaaacgcaacttctgctttgtggatggtttcagaacctgaat 1479

                                                                        
Query: 570  aaaagtatgcgcaataactctgacaactggaggaagacggacaacaattaatactccaag 629
            || ||| |||||||| ||||||||||| ||||||||||| |||| || || ||| |||||
Sbjct: 1478 aagagtctgcgcaattactctgacaacaggaggaagacgcacaataaatagtaccccaag 1419

                             
Query: 630  acgatttgggtagtttt 646
            ||||||||| |||||||
Sbjct: 1418 acgatttggatagtttt 1402



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 283  gcccttatcgcgttctcgcagttgtaaggggatggaagctcc 324
            |||||||| || ||||||||| | ||||| ||||||||||||
Sbjct: 1762 gcccttatggcattctcgcagctataaggagatggaagctcc 1721
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>dbj|AK072450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118D10, full
            insert sequence
          Length = 2364

 Score =  176 bits (89), Expect = 6e-41
 Identities = 215/257 (83%)
 Strand = Plus / Minus

                                                                        
Query: 390  gctcctgctcccctcccctgcctggattagtgaactgtctcgaggcttcttgcatcgaga 449
            |||| |||| || ||||||||||| |||| |||| | |  || |||||||  ||| | | 
Sbjct: 1613 gctcttgctgccttcccctgcctgtattactgaaatattacgcggcttctcacattgcgg 1554

                                                                        
Query: 450  gcagttgcatttgccgccgaggaaagctgggacgatctgtaagaactcggctaacgtctt 509
            |||| |||||||||| || || |||| ||| || ||||| |||||||||||||| |||||
Sbjct: 1553 gcagctgcatttgccaccaagaaaagttggcacaatctgcaagaactcggctaatgtctt 1494

                                                                        
Query: 510  cttgtacgattccccctcgaaacgcagcttctgctttgtggatggtttcaggagttgaat 569
            ||| || ||||| ||||| ||||||| |||||||||||||||||||||||| |  |||||
Sbjct: 1493 cttatatgattctccctcaaaacgcaacttctgctttgtggatggtttcagaacctgaat 1434

                                                                        
Query: 570  aaaagtatgcgcaataactctgacaactggaggaagacggacaacaattaatactccaag 629
            || ||| |||||||| ||||||||||| ||||||||||| |||| || || ||| |||||
Sbjct: 1433 aagagtctgcgcaattactctgacaacaggaggaagacgcacaataaatagtaccccaag 1374

                             
Query: 630  acgatttgggtagtttt 646
            ||||||||| |||||||
Sbjct: 1373 acgatttggatagtttt 1357



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 283  gcccttatcgcgttctcgcagttgtaaggggatggaagctcc 324
            |||||||| || ||||||||| | ||||| ||||||||||||
Sbjct: 1717 gcccttatggcattctcgcagctataaggagatggaagctcc 1676
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  109 bits (55), Expect = 1e-20
 Identities = 142/171 (83%)
 Strand = Plus / Plus

                                                                            
Query: 390      gctcctgctcccctcccctgcctggattagtgaactgtctcgaggcttcttgcatcgaga 449
                |||| |||| || ||||||||||| |||| |||| | |  || |||||||  ||| | | 
Sbjct: 34136219 gctcttgctgccttcccctgcctgtattactgaaatattacgcggcttctcacattgcgg 34136278

                                                                            
Query: 450      gcagttgcatttgccgccgaggaaagctgggacgatctgtaagaactcggctaacgtctt 509
                |||| |||||||||| || || |||| ||| || ||||| |||||||||||||| |||||
Sbjct: 34136279 gcagctgcatttgccaccaagaaaagttggcacaatctgcaagaactcggctaatgtctt 34136338

                                                                   
Query: 510      cttgtacgattccccctcgaaacgcagcttctgctttgtggatggtttcag 560
                ||| || ||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct: 34136339 cttatatgattctccctcaaaacgcaacttctgctttgtggatggtttcag 34136389



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                            
Query: 565      tgaataaaagtatgcgcaataactctgacaactggaggaagacggacaacaattaatact 624
                ||||||| ||| |||||||| ||||||||||| ||||||||||| |||| || || ||| 
Sbjct: 34136669 tgaataagagtctgcgcaattactctgacaacaggaggaagacgcacaataaatagtacc 34136728

                                      
Query: 625      ccaagacgatttgggtagtttt 646
                |||||||||||||| |||||||
Sbjct: 34136729 ccaagacgatttggatagtttt 34136750



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 283      gcccttatcgcgttctcgcagttgtaaggggatggaagctcc 324
                |||||||| || ||||||||| | ||||| ||||||||||||
Sbjct: 34136115 gcccttatggcattctcgcagctataaggagatggaagctcc 34136156
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  109 bits (55), Expect = 1e-20
 Identities = 142/171 (83%)
 Strand = Plus / Plus

                                                                            
Query: 390      gctcctgctcccctcccctgcctggattagtgaactgtctcgaggcttcttgcatcgaga 449
                |||| |||| || ||||||||||| |||| |||| | |  || |||||||  ||| | | 
Sbjct: 34226691 gctcttgctgccttcccctgcctgtattactgaaatattacgcggcttctcacattgcgg 34226750

                                                                            
Query: 450      gcagttgcatttgccgccgaggaaagctgggacgatctgtaagaactcggctaacgtctt 509
                |||| |||||||||| || || |||| ||| || ||||| |||||||||||||| |||||
Sbjct: 34226751 gcagctgcatttgccaccaagaaaagttggcacaatctgcaagaactcggctaatgtctt 34226810

                                                                   
Query: 510      cttgtacgattccccctcgaaacgcagcttctgctttgtggatggtttcag 560
                ||| || ||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct: 34226811 cttatatgattctccctcaaaacgcaacttctgctttgtggatggtttcag 34226861



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                            
Query: 565      tgaataaaagtatgcgcaataactctgacaactggaggaagacggacaacaattaatact 624
                ||||||| ||| |||||||| ||||||||||| ||||||||||| |||| || || ||| 
Sbjct: 34227141 tgaataagagtctgcgcaattactctgacaacaggaggaagacgcacaataaatagtacc 34227200

                                      
Query: 625      ccaagacgatttgggtagtttt 646
                |||||||||||||| |||||||
Sbjct: 34227201 ccaagacgatttggatagtttt 34227222



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 283      gcccttatcgcgttctcgcagttgtaaggggatggaagctcc 324
                |||||||| || ||||||||| | ||||| ||||||||||||
Sbjct: 34226587 gcccttatggcattctcgcagctataaggagatggaagctcc 34226628
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>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete
              sequence
          Length = 163828

 Score =  109 bits (55), Expect = 1e-20
 Identities = 142/171 (83%)
 Strand = Plus / Plus

                                                                          
Query: 390    gctcctgctcccctcccctgcctggattagtgaactgtctcgaggcttcttgcatcgaga 449
              |||| |||| || ||||||||||| |||| |||| | |  || |||||||  ||| | | 
Sbjct: 100031 gctcttgctgccttcccctgcctgtattactgaaatattacgcggcttctcacattgcgg 100090

                                                                          
Query: 450    gcagttgcatttgccgccgaggaaagctgggacgatctgtaagaactcggctaacgtctt 509
              |||| |||||||||| || || |||| ||| || ||||| |||||||||||||| |||||
Sbjct: 100091 gcagctgcatttgccaccaagaaaagttggcacaatctgcaagaactcggctaatgtctt 100150

                                                                 
Query: 510    cttgtacgattccccctcgaaacgcagcttctgctttgtggatggtttcag 560
              ||| || ||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct: 100151 cttatatgattctccctcaaaacgcaacttctgctttgtggatggtttcag 100201



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                          
Query: 565    tgaataaaagtatgcgcaataactctgacaactggaggaagacggacaacaattaatact 624
              ||||||| ||| |||||||| ||||||||||| ||||||||||| |||| || || ||| 
Sbjct: 100481 tgaataagagtctgcgcaattactctgacaacaggaggaagacgcacaataaatagtacc 100540

                                    
Query: 625    ccaagacgatttgggtagtttt 646
              |||||||||||||| |||||||
Sbjct: 100541 ccaagacgatttggatagtttt 100562



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 283   gcccttatcgcgttctcgcagttgtaaggggatggaagctcc 324
             |||||||| || ||||||||| | ||||| ||||||||||||
Sbjct: 99927 gcccttatggcattctcgcagctataaggagatggaagctcc 99968
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>gb|AY110817.1| Zea mays CL15151_1 mRNA sequence
          Length = 584

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 227 tcatcccagcgagaaaggcgacaaaaatccacaccatcagcaggccgatcaccgcggccc 286
           |||||||||| ||||| ||||| || || |||||||||||||||||||| | ||| ||||
Sbjct: 207 tcatcccagccagaaacgcgacgaagatgcacaccatcagcaggccgattatcgcagccc 266

                            
Query: 287 ttatcgcgttctcgcag 303
           | || ||||||||||||
Sbjct: 267 tgatggcgttctcgcag 283



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 450 gcagttgcatttgccgccgaggaaagctgggacgatctgtaagaactcggctaacgtctt 509
           |||| ||||||| ||||| || || ||||| |||  ||| | |||||| || || | |||
Sbjct: 427 gcagctgcatttaccgcccagaaacgctggcacggcctgcaggaactccgccaatgcctt 486

                                                 
Query: 510 cttgtacgattccccctcgaaacgcagcttctgctttg 547
           ||||||||| || ||||| ||||||| |||||||||||
Sbjct: 487 cttgtacgaatctccctcaaaacgcaacttctgctttg 524
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 258     caccatcagcaggccgatcaccgcggcc 285
               ||||||| ||||||||||||||||||||
Sbjct: 1662843 caccatctgcaggccgatcaccgcggcc 1662870
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 260     ccatcagcaggccgatcaccgcg 282
               |||||||||||||||||||||||
Sbjct: 2680820 ccatcagcaggccgatcaccgcg 2680798
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>gb|AC163102.5| Mus musculus chromosome 18, clone RP23-270E10, complete sequence
          Length = 179127

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 255    ccacaccatcagcaggccgatc 276
              ||||||||||||||||||||||
Sbjct: 142899 ccacaccatcagcaggccgatc 142920
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>gb|BC040364.1| Mus musculus dystrobrevin alpha, transcript variant 1, mRNA (cDNA
            clone MGC:25316 IMAGE:4505583), complete cds
          Length = 3195

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 255  ccacaccatcagcaggccgatc 276
            ||||||||||||||||||||||
Sbjct: 1830 ccacaccatcagcaggccgatc 1851
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>gb|BC050765.1| Mus musculus dystrobrevin alpha, mRNA (cDNA clone IMAGE:6533769)
          Length = 2716

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 255  ccacaccatcagcaggccgatc 276
            ||||||||||||||||||||||
Sbjct: 1658 ccacaccatcagcaggccgatc 1679
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>gb|AC145084.6| Mus musculus chromosome 18, clone RP24-175N20, complete sequence
          Length = 193640

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 255   ccacaccatcagcaggccgatc 276
             ||||||||||||||||||||||
Sbjct: 81524 ccacaccatcagcaggccgatc 81545
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>ref|NM_207650.3| Mus musculus dystrobrevin alpha (Dtna), transcript variant 1, mRNA
          Length = 6321

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 255  ccacaccatcagcaggccgatc 276
            ||||||||||||||||||||||
Sbjct: 1857 ccacaccatcagcaggccgatc 1878
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>emb|X95226.1|MMDYSTM24 M.musculus mRNA for dystrobrevin (clone m24)
          Length = 2607

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 255  ccacaccatcagcaggccgatc 276
            ||||||||||||||||||||||
Sbjct: 1581 ccacaccatcagcaggccgatc 1602
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>dbj|AK131649.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched
            library, clone:1520403D02 product:dystrobrevin alpha,
            full insert sequence
          Length = 2983

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 255  ccacaccatcagcaggccgatc 276
            ||||||||||||||||||||||
Sbjct: 1634 ccacaccatcagcaggccgatc 1655
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>dbj|AK135910.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
            enriched library, clone:7420436E11
            product:unclassifiable, full insert sequence
          Length = 2375

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 255  ccacaccatcagcaggccgatc 276
            ||||||||||||||||||||||
Sbjct: 1575 ccacaccatcagcaggccgatc 1554
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>dbj|AK147359.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1020E04 product:dystrobrevin alpha, full insert
            sequence
          Length = 6171

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 255  ccacaccatcagcaggccgatc 276
            ||||||||||||||||||||||
Sbjct: 1707 ccacaccatcagcaggccgatc 1728
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>dbj|AK147279.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1006A05 product:dystrobrevin alpha, full insert
            sequence
          Length = 6282

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 255  ccacaccatcagcaggccgatc 276
            ||||||||||||||||||||||
Sbjct: 1818 ccacaccatcagcaggccgatc 1839
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>dbj|AK019477.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched
            library, clone:4631433M03 product:dystrobrevin alpha,
            full insert sequence
          Length = 3861

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 255  ccacaccatcagcaggccgatc 276
            ||||||||||||||||||||||
Sbjct: 2197 ccacaccatcagcaggccgatc 2218
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>ref|XM_226109.3| PREDICTED: Rattus norvegicus similar to dystrobrevin alpha isoform 1
            (LOC307548), mRNA
          Length = 2280

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 255  ccacaccatcagcaggccgatc 276
            ||||||||||||||||||||||
Sbjct: 1718 ccacaccatcagcaggccgatc 1739
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>emb|Z79806.1|MMDBNEX20 M.musculus dystrobrevin gene, exon 20
          Length = 368

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 255 ccacaccatcagcaggccgatc 276
           ||||||||||||||||||||||
Sbjct: 121 ccacaccatcagcaggccgatc 142
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>emb|AL731548.13| Mouse DNA sequence from clone RP23-71M18 on chromosome X, complete
              sequence
          Length = 218612

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 384    gctcctgctcctgctcccctcc 405
              ||||||||||||||||||||||
Sbjct: 104213 gctcctgctcctgctcccctcc 104192
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 257    acaccatcagcaggccgatcaccgc 281
              |||||||||||| ||||||||||||
Sbjct: 614869 acaccatcagcaagccgatcaccgc 614845
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>gb|AC105230.10| Homo sapiens chromosome 8, clone RP11-699F21, complete sequence
          Length = 151517

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 104   tcaacctcaaagaggaacaaa 124
             |||||||||||||||||||||
Sbjct: 69738 tcaacctcaaagaggaacaaa 69758
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>gb|AC012215.11| Homo sapiens chromosome , clone RP11-345N15, complete sequence
          Length = 210723

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 104  tcaacctcaaagaggaacaaa 124
            |||||||||||||||||||||
Sbjct: 1689 tcaacctcaaagaggaacaaa 1669
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>gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete sequence
          Length = 162405

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 394   ctgctcccctcccctgcctggatta 418
             ||||| |||||||||||||||||||
Sbjct: 69815 ctgctaccctcccctgcctggatta 69791
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 250     aaaatccacaccatcagcaggccga 274
               ||||||||| |||||||||||||||
Sbjct: 3335524 aaaatccacgccatcagcaggccga 3335548
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 250     aaaatccacaccatcagcaggccga 274
               ||||||||| |||||||||||||||
Sbjct: 3265690 aaaatccacgccatcagcaggccga 3265714
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>ref|NM_128831.2| Arabidopsis thaliana B5 #4 AT2G32720 (B5 #4) mRNA, complete cds
          Length = 650

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 aagctcctccagttcctcgt 337
           ||||||||||||||||||||
Sbjct: 370 aagctcctccagttcctcgt 389
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 262     atcagcaggccgatcaccgc 281
               ||||||||||||||||||||
Sbjct: 2592162 atcagcaggccgatcaccgc 2592181
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>gb|BC059541.1| Danio rerio endothelial differentiation-related factor 1, mRNA
           (cDNA clone MGC:73192 IMAGE:4788452), complete cds
          Length = 868

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 201 ctaagaaatgggctgctggg 220
           ||||||||||||||||||||
Sbjct: 213 ctaagaaatgggctgctggg 232
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>gb|AC127592.6| Mus musculus BAC clone RP23-330A5 from chromosome 16, complete sequence
          Length = 185326

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 610   acaacaattaatactccaagacga 633
             |||||||||||| |||||||||||
Sbjct: 16449 acaacaattaattctccaagacga 16472
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>gb|AC117184.3| Mus musculus BAC clone RP23-37L10 from chromosome 7, complete sequence
          Length = 187341

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 376   ctgataaggctcctgctcct 395
             ||||||||||||||||||||
Sbjct: 50881 ctgataaggctcctgctcct 50900
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>ref|XM_923836.2| PREDICTED: Mus musculus zinc finger protein 694, transcript variant
           6 (Zfp694), mRNA
          Length = 3401

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 376 ctgataaggctcctgctcct 395
           ||||||||||||||||||||
Sbjct: 551 ctgataaggctcctgctcct 532
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>ref|XM_915604.2| PREDICTED: Mus musculus zinc finger protein 694, transcript variant 5
            (Zfp694), mRNA
          Length = 4584

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 376  ctgataaggctcctgctcct 395
            ||||||||||||||||||||
Sbjct: 2836 ctgataaggctcctgctcct 2817
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>ref|XM_983013.1| PREDICTED: Mus musculus zinc finger protein 694, transcript variant
           3 (Zfp694), mRNA
          Length = 3401

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 376 ctgataaggctcctgctcct 395
           ||||||||||||||||||||
Sbjct: 551 ctgataaggctcctgctcct 532
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>ref|XM_982976.1| PREDICTED: Mus musculus zinc finger protein 694, transcript variant 2
            (Zfp694), mRNA
          Length = 4584

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 376  ctgataaggctcctgctcct 395
            ||||||||||||||||||||
Sbjct: 2836 ctgataaggctcctgctcct 2817
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>ref|XM_622104.3| PREDICTED: Mus musculus zinc finger protein 694, transcript variant
           1 (Zfp694), mRNA
          Length = 3401

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 376 ctgataaggctcctgctcct 395
           ||||||||||||||||||||
Sbjct: 551 ctgataaggctcctgctcct 532
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>ref|XM_894621.2| PREDICTED: Mus musculus zinc finger protein 694, transcript variant 2
            (Zfp694), mRNA
          Length = 4584

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 376  ctgataaggctcctgctcct 395
            ||||||||||||||||||||
Sbjct: 2836 ctgataaggctcctgctcct 2817
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>gb|AC124565.2| Mus musculus BAC clone RP23-143I23 from 16, complete sequence
          Length = 177251

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 610   acaacaattaatactccaagacga 633
             |||||||||||| |||||||||||
Sbjct: 22378 acaacaattaattctccaagacga 22355
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>gb|BC054371.1| Mus musculus zinc finger protein 694, transcript variant 1, mRNA
           (cDNA clone IMAGE:5367422), complete cds
          Length = 3329

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 376 ctgataaggctcctgctcct 395
           ||||||||||||||||||||
Sbjct: 551 ctgataaggctcctgctcct 532
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>gb|BC028272.1| Mus musculus zinc finger protein 694, transcript variant 1, mRNA
           (cDNA clone IMAGE:5367422), complete cds
          Length = 3287

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 376 ctgataaggctcctgctcct 395
           ||||||||||||||||||||
Sbjct: 562 ctgataaggctcctgctcct 543
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>emb|AL355316.12| Human DNA sequence from clone RP11-82L9 on chromosome 10 Contains the
            3' end of the DOCK1 gene for dedicator of cyto-kinesis 1,
            complete sequence
          Length = 142638

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 393  cctgctcccctcccctgcct 412
            ||||||||||||||||||||
Sbjct: 3325 cctgctcccctcccctgcct 3306
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>emb|AL139343.9| Human DNA sequence from clone RP5-1078M7 on chromosome 1p32.1-32.3
             Contains the 5' end of a novel gene, complete sequence
          Length = 144818

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 385   ctcctgctcctgctcccctc 404
             ||||||||||||||||||||
Sbjct: 32557 ctcctgctcctgctcccctc 32576
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>gb|BT000085.1| Arabidopsis thaliana putative cytochrome b5 (At2g32720) mRNA,
           complete cds
          Length = 532

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 aagctcctccagttcctcgt 337
           ||||||||||||||||||||
Sbjct: 328 aagctcctccagttcctcgt 347
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>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 264    cagcaggccgatcaccgcgg 283
              ||||||||||||||||||||
Sbjct: 278242 cagcaggccgatcaccgcgg 278223
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>emb|AL669827.5| Mouse DNA sequence from clone RP23-350D17 on chromosome 11 Contains a
             PDZ domain containing guanine (Pdzgef1) pseudogene, a
             tubulin alpha 4 (Tuba4) pseudogene , an olfactory receptor
             pseudogene, a novel pseudogene and the 3' end of a novel
             gene, complete sequence
          Length = 108424

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   aggagacaggggggtcagga 198
             ||||||||||||||||||||
Sbjct: 63820 aggagacaggggggtcagga 63801
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>gb|AY128405.1| Arabidopsis thaliana putative cytochrome b5 (At2g32720) mRNA,
           complete cds
          Length = 588

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 aagctcctccagttcctcgt 337
           ||||||||||||||||||||
Sbjct: 362 aagctcctccagttcctcgt 381
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>gb|AC108937.4| Homo sapiens BAC clone RP11-679I19 from 4, complete sequence
          Length = 105033

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   aggggatggaagctcctcca 328
             ||||||||||||||||||||
Sbjct: 61387 aggggatggaagctcctcca 61406
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>gb|AC003974.3| Arabidopsis thaliana chromosome 2 clone F24L7 map TEn5, complete
             sequence
          Length = 92612

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   aagctcctccagttcctcgt 337
             ||||||||||||||||||||
Sbjct: 62071 aagctcctccagttcctcgt 62090
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>gb|AC093841.3| Homo sapiens BAC clone RP11-438F11 from 4, complete sequence
          Length = 168190

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 387   cctgctcctgctcccctcccctgc 410
             |||||||||||||||| |||||||
Sbjct: 82458 cctgctcctgctccccacccctgc 82481
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>dbj|AK034954.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430065N20 product:similar to ZINC FINGER PROTEIN
            (FRAGMENT) [Homo sapiens], full insert sequence
          Length = 3704

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 376  ctgataaggctcctgctcct 395
            ||||||||||||||||||||
Sbjct: 2838 ctgataaggctcctgctcct 2819
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 382      aggctcctgctcctgctcccctcc 405
                ||||||||||||||||||| ||||
Sbjct: 25401525 aggctcctgctcctgctcctctcc 25401548
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>emb|BX821782.1|CNS0A99H Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL73ZD01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 595

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 aagctcctccagttcctcgt 337
           ||||||||||||||||||||
Sbjct: 301 aagctcctccagttcctcgt 320
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>ref|NM_200745.1| Danio rerio endothelial differentiation-related factor 1 (edf1),
           mRNA
          Length = 868

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 201 ctaagaaatgggctgctggg 220
           ||||||||||||||||||||
Sbjct: 213 ctaagaaatgggctgctggg 232
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>ref|XM_218444.3| PREDICTED: Rattus norvegicus similar to FKSG27 (predicted)
           (LOC292708), mRNA
          Length = 2627

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 351 cgagactggtgacctggagccggcgctg 378
           ||||||||||| ||||||| ||||||||
Sbjct: 783 cgagactggtggcctggaggcggcgctg 810
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>gb|AC131958.1| Homo sapiens BAC clone RP11-62O19 from 2, complete sequence
          Length = 31484

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 199  ggctaagaaatgggctgctg 218
            ||||||||||||||||||||
Sbjct: 7111 ggctaagaaatgggctgctg 7092
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>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0019I19
          Length = 164483

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 382   aggctcctgctcctgctcccctcc 405
             ||||||||||||||||||| ||||
Sbjct: 75534 aggctcctgctcctgctcctctcc 75557
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>gb|BC071480.1| Danio rerio endothelial differentiation-related factor 1, mRNA
           (cDNA clone MGC:86829 IMAGE:6902035), complete cds
          Length = 826

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 201 ctaagaaatgggctgctggg 220
           ||||||||||||||||||||
Sbjct: 228 ctaagaaatgggctgctggg 247
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>emb|AL772310.27| Mouse DNA sequence from clone RP23-34B24 on chromosome 4, complete
             sequence
          Length = 211901

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 381   aaggctcctgctcctgctcc 400
             ||||||||||||||||||||
Sbjct: 61860 aaggctcctgctcctgctcc 61841
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>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome
          Length = 1751377

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 369   gccggcgctgataaggctcctgct 392
             ||||||||||| ||||||||||||
Sbjct: 44955 gccggcgctgacaaggctcctgct 44978
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>gb|M10296.1|MUSIR3E1 Mouse DNA with homology to EBV IR3 repeat, segment 1, clone Mu2
          Length = 460

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 384 gctcctgctcctgctcccct 403
           ||||||||||||||||||||
Sbjct: 189 gctcctgctcctgctcccct 170


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,159,381
Number of Sequences: 3902068
Number of extensions: 5159381
Number of successful extensions: 113750
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113237
Number of HSP's gapped (non-prelim): 512
length of query: 646
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 623
effective length of database: 17,143,297,704
effective search space: 10680274469592
effective search space used: 10680274469592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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