>CTR1_RAT (P30823) High-affinity cationic amino acid transporter 1 (CAT-1)|
           (CAT1) (System Y+ basic amino acid transporter)
           (Ecotropic retroviral leukemia receptor) (ERR)
           (Ecotropic retrovirus receptor)
          Length = 624

 Score = 33.5 bits (75), Expect = 0.62
 Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
 Frame = -2

Query: 662 KTINERDMY-QNNYFHASEAFFSIL--LDKDNSSTILSLKKAGP-EITELLTQCSIGIAG 495
           +T +E D   QN    ASE+    L   +K +  TILS K   P + + L+   S G+  
Sbjct: 440 RTTDELDQVDQNEMVSASESQTGFLPAAEKFSLKTILSPKNMEPSKFSGLIVNISAGL-- 497

Query: 494 TGLAVLLSVVCKIAIGGRTPFAATRLLHTGVGFGLFWLSHAVNGL 360
             LAVL+  VC +A+ GR   A   L    V  G   L   V G+
Sbjct: 498 --LAVLIITVCIVAVLGREALAEGTLWAVFVMTGSVLLCMLVTGI 540

>FLO5_YEAST (P38894) Flocculation protein FLO5 precursor (Flocculin-5)|
          Length = 1075

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 20/80 (25%), Positives = 38/80 (47%)
 Frame = +1

Query: 331 PLNTVVIVFRSPFTAWESQKSPNPTPVCSSRVAAKGVLPPMAILHTTDRRTARPVPAIPI 510
           P +  VIV R+P TA  S  S +   + SS  +++ ++ P    + T       + +  I
Sbjct: 619 PTDETVIVIRTPTTAISSSLSSSSGQITSSITSSRPIITPFYPSNGTS-----VISSSVI 673

Query: 511 EHCVNSSVISGPAFFSERIV 570
              V SS+++  +F S  ++
Sbjct: 674 SSSVTSSLVTSSSFISSSVI 693

>PURA_PASMU (P57889) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 432

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 21/54 (38%), Positives = 28/54 (51%)
 Frame = -2

Query: 410 TGVGFGLFWLSHAVNGLRNTITTVFRGPVDAKLEDEVAVKIQRSMNDILFRAVT 249
           TG GFG   L + +  ++   T V  GP   +L DEV  +I R  N+  F AVT
Sbjct: 251 TGAGFGPRNLDYVLGIIKAYCTRVGGGPFTTELFDEVGSEIARKGNE--FGAVT 302

>ARP4_DEBHA (Q6BXN0) Actin-like protein ARP4|
          Length = 492

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 33/158 (20%), Positives = 63/158 (39%), Gaps = 6/158 (3%)
 Frame = +3

Query: 9   INVQNRQNLSSYTPSCQQNSVQFTTSHIFYEAIMN-----HEGIWH-FSPTETALLNQKG 170
           +N +NR  + S TP+      ++T   +      +      + IWH F  T   +  +K 
Sbjct: 217 VNFENRYRIKSKTPTVYPEESKYTVRDLSENITQSFDDYQRQNIWHEFKETMLEVPEKKF 276

Query: 171 NHTSRCVKLQQCRNSLCKPQSSDCQESYGPEENIVHASLYLHSNLILQLCVDRASEYGGD 350
           N ++               Q++  +E Y  + N       L +   L+LC++R       
Sbjct: 277 NTSN-------------TSQANSLKEIYSQDSN--KRLFELPTGQSLELCLERFQ----- 316

Query: 351 CVPQSIYRVGEPEEPKPNACVQQPSSGKRSPPANGDLA 464
            +  S++   +P+  K N     P    + PP+NG+L+
Sbjct: 317 -LADSLF---DPQSYKFN----NPDLATKYPPSNGELS 346

>PURA_HAEIN (P45283) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 431

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -2

Query: 410 TGVGFGLFWLSHAVNGLRNTITTVFRGPVDAKLEDEVAVKIQRSMNDILFRAVT 249
           TG GFG   L + +  ++   T V  GP   +L D+V  +I R  N+  F AVT
Sbjct: 250 TGSGFGPRNLDYVLGIIKAYCTRVGGGPFTTELFDDVGAEIARKGNE--FGAVT 301

>PURA_HAEI8 (Q4QL68) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 431

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -2

Query: 410 TGVGFGLFWLSHAVNGLRNTITTVFRGPVDAKLEDEVAVKIQRSMNDILFRAVT 249
           TG GFG   L + +  ++   T V  GP   +L D+V  +I R  N+  F AVT
Sbjct: 250 TGSGFGPRNLDYVLGIIKAYCTRVGGGPFTTELFDDVGAEIARKGNE--FGAVT 301

>VL1_HPV18 (P06794) Major capsid protein L1|
          Length = 568

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +3

Query: 345 GDCVPQSIYRVGEPEEPKPNACVQQPS 425
           GD VPQS+Y  G      P +CV  PS
Sbjct: 329 GDTVPQSLYIKGTGMPASPGSCVYSPS 355

>ESXA_MYCLE (Q50206) 6 kDa early secretory antigenic target homolog|
           (ESAT-6-like protein) (L-ESAT)
          Length = 95

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 126 WHFSPTETALLNQKGNHTSRCVKLQQCRNSLCKPQSS 236
           WHF   + A+   +G+ +     L+QC+ SL K QSS
Sbjct: 5   WHFPALQGAVNELQGSQSRIDALLEQCQESLTKLQSS 41


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,507,580
Number of Sequences: 219361
Number of extensions: 2289871
Number of successful extensions: 6556
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6549
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6769072002
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)