ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal16b23 |
|---|---|
| Clone Library Name | barley_pub |
>AMO_LENCU (P49252) Amine oxidase [copper-containing] precursor (EC 1.4.3.6)| (Fragment) Length = 667 Score = 168 bits (426), Expect = 1e-41 Identities = 72/126 (57%), Positives = 97/126 (76%) Frame = -2 Query: 637 GYKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDTLATW 458 GY+++PA A LL +D PQ RGAFTN +WVTPYN++E+WAGGL+V S+G+DTLA W Sbjct: 540 GYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTPYNRTEKWAGGLYVDHSRGDDTLAVW 599 Query: 457 TERDRPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPILKQRPTME 278 T+++R I NKD+V+W+ +G HH+P QEDFPIMP +S+SF+L+P NFFE NP+LK P + Sbjct: 600 TKKNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTNFFERNPVLKTLPPRD 659 Query: 277 KDLPVC 260 P C Sbjct: 660 FTWPGC 665
>AMO_PEA (Q43077) Amine oxidase [copper-containing] precursor (EC 1.4.3.6)| Length = 674 Score = 162 bits (409), Expect = 1e-39 Identities = 70/126 (55%), Positives = 95/126 (75%) Frame = -2 Query: 637 GYKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDTLATW 458 GY+++PA A LL +D PQ RGAFTN +WVT YN++E+WAGGL+V S+G+DTLA W Sbjct: 547 GYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVW 606 Query: 457 TERDRPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPILKQRPTME 278 T+++R I NKD+V+W+ +G HH+P QEDFPIMP +S+SF+L+P NFFE NP+LK + Sbjct: 607 TKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTNFFERNPVLKTLSPRD 666 Query: 277 KDLPVC 260 P C Sbjct: 667 VAWPGC 672
>AMO2_ARTS1 (Q07123) Copper methylamine oxidase precursor (EC 1.4.3.6) (MAOXII)| Length = 648 Score = 94.0 bits (232), Expect = 3e-19 Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 1/113 (0%) Frame = -2 Query: 634 YKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKG-EDTLATW 458 Y+++P + KR F N +WVT Y+++E +A G + Q+ G +D L W Sbjct: 514 YRLIPTNGIQLAARDDAYVSKRAQFARNNLWVTAYDRTERFAAGEYPNQATGADDGLHIW 573 Query: 457 TERDRPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPIL 299 T++DR I + DLV+WYT G HH+ ED+P+MP + F L+P FF NP L Sbjct: 574 TQKDRNIVDTDLVVWYTFGMHHVVRLEDWPVMPRQNIGFMLEPHGFFNQNPTL 626
>AMO1_ARTS1 (Q07121) Copper amine oxidase precursor (EC 1.4.3.6) (MAOXI)| Length = 648 Score = 94.0 bits (232), Expect = 3e-19 Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 1/113 (0%) Frame = -2 Query: 634 YKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKG-EDTLATW 458 Y+++P + KR F N +WVT Y+++E +A G + Q+ G +D L W Sbjct: 514 YRLIPTNGIQLAARDDAYVSKRAQFARNNLWVTAYDRTERFAAGEYPNQATGADDGLHIW 573 Query: 457 TERDRPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPIL 299 T++DR I + DLV+WYT G HH+ ED+P+MP + F L+P FF NP L Sbjct: 574 TQKDRNIVDTDLVVWYTFGMHHVVRLEDWPVMPRQNIGFMLEPHGFFNQNPTL 626
>AMOH_ARTGO (Q59118) Histamine oxidase (EC 1.4.3.6) (Copper amine oxidase)| Length = 683 Score = 90.9 bits (224), Expect = 3e-18 Identities = 43/113 (38%), Positives = 62/113 (54%) Frame = -2 Query: 637 GYKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDTLATW 458 GY + P G + + R AF + +WVT + + E +A G FV Q G L + Sbjct: 530 GYTLYPEGNPTLAMADDSSIASRAAFARHHLWVTRHAEEELYAAGDFVNQHPGGAVLPAY 589 Query: 457 TERDRPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPIL 299 +DR I+ +DLV+W++ G H P ED+PIMP ++ F LKP FF+ NP L Sbjct: 590 VAQDRDIDGQDLVVWHSFGLTHFPRPEDWPIMPVDTTGFTLKPHGFFDENPTL 642
>PAOX_ARTGO (P46881) Phenylethylamine oxidase precursor (EC 1.4.3.6) (Amine| oxidase) Length = 638 Score = 89.0 bits (219), Expect = 1e-17 Identities = 43/113 (38%), Positives = 61/113 (53%) Frame = -2 Query: 637 GYKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDTLATW 458 GYK+ L DP +R AF +WVT Y E + G FV Q G L ++ Sbjct: 511 GYKLHAHNQPTLLADPGSSIARRAAFATKDLWVTRYADDERYPTGDFVNQHSGGAGLPSY 570 Query: 457 TERDRPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPIL 299 +DR I+ +D+V+W+T G H P ED+PIMP + F L+P FF+ +P+L Sbjct: 571 IAQDRDIDGQDIVVWHTFGLTHFPRVEDWPIMPVDTVGFKLRPEGFFDRSPVL 623
>AMO1_ASPNG (Q12556) Copper amine oxidase 1 (EC 1.4.3.6)| Length = 671 Score = 82.4 bits (202), Expect = 1e-15 Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 1/114 (0%) Frame = -2 Query: 637 GYKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGE-DTLAT 461 GYK +P T L DP +R F + +WVT Y E +AGG + QS+ E + ++ Sbjct: 535 GYKFIPLATQRLLADPNSIQARRAQFAQHHVWVTKYRDGELYAGGRYTLQSQEEIEGVSD 594 Query: 460 WTERDRPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPIL 299 +R + + D+V+W T G H P ED+P+MP ++P +FF +NP L Sbjct: 595 AVKRGDSVVDTDVVVWSTFGITHNPRVEDWPVMPVEIFQLMIRPADFFTANPSL 648
>AMO_SCHPO (O42890) Putative copper amine oxidase (EC 1.4.3.6)| Length = 794 Score = 75.9 bits (185), Expect = 1e-13 Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 5/117 (4%) Frame = -2 Query: 634 YKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDT---LA 464 YK++ T+ L P F N I+VTPY + + G + Q+ +DT L+ Sbjct: 520 YKLISRDTSPVLSQPGTTNSDCSGFAENNIYVTPYMDDQIFPTGDYAPQAS-DDTPKGLS 578 Query: 463 TWTERD--RPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPIL 299 W D I+N D+V+W+T G H P EDFPIMP S L+P NFF+ NP L Sbjct: 579 KWISDDPNAQIKNTDIVVWHTFGMIHFPAPEDFPIMPAESIHLFLQPRNFFKHNPAL 635
>AMO_KLEAE (P49250) Copper amine oxidase precursor (EC 1.4.3.6) (Monamine| oxidase) (Tyramine oxidase) Length = 755 Score = 70.5 bits (171), Expect = 4e-12 Identities = 38/111 (34%), Positives = 60/111 (54%) Frame = -2 Query: 622 PAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDTLATWTERDR 443 PA T A P++ R +F + Q+WVT Y+ +E + G + +S + L + + D Sbjct: 644 PAATGAKFA-PDEWIYHRLSFMDKQLWVTRYHPTERYPEGKYPNRSAHDTGLGQYAKDDE 702 Query: 442 PIENKDLVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPILKQR 290 + N D V+W T G H+ E++PIMPT + LKP NFF+ P L ++ Sbjct: 703 SLTNHDDVVWITTGTTHVARAEEWPIMPTEWALALLKPWNFFDETPTLGEK 753
>AMO_ECOLI (P46883) Copper amine oxidase precursor (EC 1.4.3.6) (Tyramine| oxidase) (2-phenylethylamine oxidase) Length = 757 Score = 66.2 bits (160), Expect = 8e-11 Identities = 33/98 (33%), Positives = 54/98 (55%) Frame = -2 Query: 592 PEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDTLATWTERDRPIENKDLVLW 413 P++ R +F + Q+WVT Y+ E + G + +S + L +++ + ++N D V+W Sbjct: 653 PDEWIYHRLSFMDKQLWVTRYHPGERFPEGKYPNRSTHDTGLGQYSKDNESLDNTDAVVW 712 Query: 412 YTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPIL 299 T G H+ E++PIMPT LKP NFF+ P L Sbjct: 713 MTTGTTHVARAEEWPIMPTEWVHTLLKPWNFFDETPTL 750
>ABP1_MOUSE (Q8JZQ5) Amiloride-sensitive amine oxidase [copper-containing]| precursor (EC 1.4.3.6) (Diamine oxidase) (DAO) (Amiloride-binding protein) (ABP) (Histaminase) Length = 751 Score = 60.8 bits (146), Expect = 3e-09 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 4/122 (3%) Frame = -2 Query: 634 YKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDTLA--T 461 Y++ A +L P ++ + + VT Y +SE ++ L+ + + Sbjct: 593 YRLQIHSMAEQVLPPGWQEERAVTWARYPLAVTKYRESERYSSSLYNQNDPWDPPVVFEE 652 Query: 460 WTERDRPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSS--SFDLKPVNFFESNPILKQRP 287 + + IEN+DLV W T+GF HIP ED P T + F ++P NFFE +P L R Sbjct: 653 FLRNNENIENEDLVAWVTVGFLHIPHSEDVPNTATPGNCVGFLIRPFNFFEEDPSLASRD 712 Query: 286 TM 281 T+ Sbjct: 713 TV 714
>ABP1_RAT (P36633) Amiloride-sensitive amine oxidase [copper-containing]| precursor (EC 1.4.3.6) (Diamine oxidase) (DAO) (Amiloride-binding protein) (ABP) (Histaminase) Length = 746 Score = 58.9 bits (141), Expect = 1e-08 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 4/122 (3%) Frame = -2 Query: 634 YKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDTLA--T 461 Y++ A +L P ++ + + VT Y +SE ++ L+ + + Sbjct: 588 YRLQIHSMAEQVLPPGWQEERAVTWARYPLAVTKYRESERYSSSLYNQNDPWDPPVVFEE 647 Query: 460 WTERDRPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSSS--FDLKPVNFFESNPILKQRP 287 + + IE++DLV W T+GF HIP ED P T +S F L+P NFF +P L R Sbjct: 648 FLRNNENIEDEDLVAWVTVGFLHIPHSEDVPNTATPGNSVGFLLRPFNFFPEDPSLASRD 707 Query: 286 TM 281 T+ Sbjct: 708 TV 709
>AMO_PICAN (P12807) Peroxisomal copper amine oxidase (EC 1.4.3.6) (Methylamine| oxidase) Length = 692 Score = 58.5 bits (140), Expect = 2e-08 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 3/120 (2%) Frame = -2 Query: 634 YKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDT--LAT 461 YK+V L KR + ++ + V PY + + G V Q G+ + Sbjct: 541 YKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMRE 600 Query: 460 WT-ERDRPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPILKQRPT 284 W + I+N D++ ++T G H P EDFP+MP + L+P +FF NP L +P+ Sbjct: 601 WIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGLDIQPS 660
>ABP1_HUMAN (P19801) Amiloride-sensitive amine oxidase [copper-containing]| precursor (EC 1.4.3.6) (Diamine oxidase) (DAO) (Amiloride-binding protein) (ABP) (Histaminase) (Kidney amine oxidase) (KAO) Length = 751 Score = 56.6 bits (135), Expect = 6e-08 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 4/122 (3%) Frame = -2 Query: 634 YKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDTLA--T 461 Y++ A +L P ++ + + VT Y +SE + ++ + + Sbjct: 593 YRLQIHSMADQVLPPGWQEEQAITWARYPLAVTKYRESELCSSSIYHQNDPWDPPVVFEQ 652 Query: 460 WTERDRPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSSS--FDLKPVNFFESNPILKQRP 287 + + IEN+DLV W T+GF HIP ED P T +S F L+P NFF +P L R Sbjct: 653 FLHNNENIENEDLVAWVTVGFLHIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLASRD 712 Query: 286 TM 281 T+ Sbjct: 713 TV 714
>AOC3_MOUSE (O70423) Membrane copper amine oxidase (EC 1.4.3.6)| (Semicarbazide-sensitive amine oxidase) (SSAO) (Vascular adhesion protein 1) (VAP-1) Length = 764 Score = 52.4 bits (124), Expect = 1e-06 Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 4/115 (3%) Frame = -2 Query: 637 GYKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDTLATW 458 GY++ A L E P +K + + VT + E + +F T+ + Sbjct: 601 GYRIQILSFAGKPLPQESPIEKAFTWGRYHLAVTQRKEEEPSSSSIFNQNDPWTPTV-NF 659 Query: 457 TE--RDRPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSSS--FDLKPVNFFESNP 305 T+ + I +DLV W T GF HIP ED P T +S F L+P NFF+ +P Sbjct: 660 TDFISNETIAGEDLVAWVTAGFLHIPHAEDIPNTVTAGNSVGFFLRPYNFFDEDP 714
>AOCX_BOVIN (Q29437) Copper amine oxidase, liver isozyme precursor (EC 1.4.3.6)| (Amine oxidase [copper-containing]) (Serum amine oxidase) (SAO) Length = 762 Score = 51.6 bits (122), Expect = 2e-06 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 3/114 (2%) Frame = -2 Query: 637 GYKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDTLA-T 461 GY++ A + P ++ ++ Q+ +T ++E + +F T+ + Sbjct: 601 GYRIQTVSFAGGPMPQNSPMERAFSWGRYQLAITQRKETEPSSSSVFNQNDPWTPTVDFS 660 Query: 460 WTERDRPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSS--SFDLKPVNFFESNP 305 + I KDLV W T GF HIP ED P TV + F L+P NFF+ P Sbjct: 661 DFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDQEP 714
>AOC3_RAT (O08590) Membrane copper amine oxidase (EC 1.4.3.6)| (Semicarbazide-sensitive amine oxidase) (SSAO) (Vascular adhesion protein 1) (VAP-1) (VP97) Length = 762 Score = 51.6 bits (122), Expect = 2e-06 Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Frame = -2 Query: 637 GYKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDT-LAT 461 GY++ A L E P +K AFT + + + EE +Y T Sbjct: 601 GYRIQILSFAGKPLPQESPIEK--AFTWGRYHLAVTQRKEEEPSSSSIYNQNDPWTPTVD 658 Query: 460 WTE--RDRPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSS--SFDLKPVNFFESNP 305 +T+ + I +DLV W T GF HIP ED P TV + F L+P NFF+ +P Sbjct: 659 FTDFISNETIAGEDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDP 714
>AOC3_BOVIN (Q9TTK6) Membrane copper amine oxidase (EC 1.4.3.6)| (Semicarbazide-sensitive amine oxidase) (SSAO) (Vascular adhesion protein 1) (VAP-1) Length = 762 Score = 50.1 bits (118), Expect = 6e-06 Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 4/115 (3%) Frame = -2 Query: 637 GYKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDTL--A 464 GY++ A L ++ ++ Q+ VT ++E + +F T+ A Sbjct: 601 GYRIQTVSFAGRPLPQNSSTERAISWGRYQLAVTQRKETEPSSSSVFNQNDPWTPTVDFA 660 Query: 463 TWTERDRPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSS--SFDLKPVNFFESNP 305 + + I KDLV W T GF HIP ED P TV + F L+P NFF+ +P Sbjct: 661 DFINNET-IAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDP 714
>AOCY_BOVIN (O46406) Copper amine oxidase, lung isozyme precursor (EC 1.4.3.6)| (Amine oxidase [copper-containing]) (BOLAO) Length = 762 Score = 49.7 bits (117), Expect = 7e-06 Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 4/115 (3%) Frame = -2 Query: 637 GYKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDTL--A 464 GY++ A L ++ ++ Q+ VT ++E + +F T+ A Sbjct: 601 GYRIQTVSFAGRPLPQNSSTERAISWGRYQLAVTQRKETEPSSSSVFNQNDPWTPTVDFA 660 Query: 463 TWTERDRPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSS--SFDLKPVNFFESNP 305 + + I KDLV W T GF HIP ED P TV + F L+P NFF+ P Sbjct: 661 DFINNET-IAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDQEP 714
>AOC3_PONPY (Q5R9I0) Membrane copper amine oxidase (EC 1.4.3.6)| (Semicarbazide-sensitive amine oxidase) (SSAO) (Vascular adhesion protein 1) (VAP-1) Length = 762 Score = 49.7 bits (117), Expect = 7e-06 Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 6/117 (5%) Frame = -2 Query: 637 GYKVVPAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDTLATW 458 GY++ A L K ++ Q+ VT + E + +F ++ + AT Sbjct: 601 GYRIQMLSFAGKPLPQNSSMAKGFSWERYQLAVTQRKEEEPSSSSVF---NQNDPWAATV 657 Query: 457 TERD----RPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSS--SFDLKPVNFFESNP 305 D I KDLV W T GF HIP ED P TV + F L+P NFF+ +P Sbjct: 658 DFSDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDP 714
>AOC3_HUMAN (Q16853) Membrane copper amine oxidase (EC 1.4.3.6)| (Semicarbazide-sensitive amine oxidase) (SSAO) (Vascular adhesion protein 1) (VAP-1) (HPAO) Length = 762 Score = 48.9 bits (115), Expect = 1e-05 Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 4/115 (3%) Frame = -2 Query: 637 GYKVVPAGTAASLLDPEDPPQKRG-AFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDTLA- 464 GY++ A L P++ RG ++ Q+ VT + E + +F T+ Sbjct: 601 GYRIQMLSFAGEPL-PQNSSMARGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDF 659 Query: 463 TWTERDRPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSS--SFDLKPVNFFESNP 305 + + I KDLV W T GF HIP ED P TV + F L+P NFF+ +P Sbjct: 660 SDFINNETIAGKDLVAWVTAGFLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDP 714
>AOC2_MOUSE (Q812C9) Retina-specific copper amine oxidase precursor (EC| 1.4.3.6) (RAO) (Amine oxidase [copper-containing]) Length = 757 Score = 44.3 bits (103), Expect = 3e-04 Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 7/118 (5%) Frame = -2 Query: 637 GYKVV---PAGTAASLLDPEDPPQKRGAFTNNQIWVTPYNKSEEWAGGLFVYQSKGEDTL 467 GY++ P G L E+ G + Q+ VT ++E + ++ YQ+ Sbjct: 599 GYRIQIHSPPGVHVPLESSEERALSWGRY---QLVVTQRKEAEPHSSSIY-YQNDMRSPA 654 Query: 466 ATWTE--RDRPIENKDLVLWYTLGFHHIPCQEDFPIMPTVSS--SFDLKPVNFFESNP 305 + + + + +DLV W T F HIP ED P TV + F L+P NFF +P Sbjct: 655 TVFADFINNETLLGEDLVAWVTASFLHIPHAEDIPNTVTVGNRVGFLLRPYNFFNEDP 712
>AOC2_HUMAN (O75106) Retina-specific copper amine oxidase precursor (EC| 1.4.3.6) (RAO) (Amine oxidase [copper-containing]) Length = 756 Score = 41.2 bits (95), Expect = 0.003 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Frame = -2 Query: 541 VTPYNKSEEWAGGLFVYQSKGEDTLATWTE--RDRPIENKDLVLWYTLGFHHIPCQEDFP 368 V K EE +Q+ T+ + + + +DLV W T F HIP ED P Sbjct: 629 VVTQRKEEESQSSSIYHQNDIWTPTVTFADFINNETLLGEDLVAWVTASFLHIPHAEDIP 688 Query: 367 IMPTVSS--SFDLKPVNFFESNP 305 T+ + F L+P NFF+ +P Sbjct: 689 NTVTLGNRVGFLLRPYNFFDEDP 711
>SRA1_HUMAN (Q9HD15) Steroid receptor RNA activator 1 (Steroid receptor RNA| activator protein) (SRAP) Length = 236 Score = 33.1 bits (74), Expect = 0.72 Identities = 17/45 (37%), Positives = 20/45 (44%) Frame = +1 Query: 379 PDKGCGGTPACTTAPGPCSRSDGPSPSK*PACPPLCSGTRTAHRP 513 P G PA T+PGP P SK P PP+ SG + P Sbjct: 56 PQDGSPRVPASETSPGPPPMGPPPPSSKAPRSPPVGSGPASGVEP 100
>PURU_CORS1 (Q46339) Formyltetrahydrofolate deformylase (EC 3.5.1.10)| (Formyl-FH(4) hydrolase) Length = 286 Score = 32.7 bits (73), Expect = 0.94 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = -2 Query: 436 ENKDLVLWYTLGFHHIPCQED 374 +++ LV WY +GFHHIP +D Sbjct: 128 DHRSLVEWYGIGFHHIPISKD 148
>R1AB_CVMJD (P26627) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p28-p210 fusion] (Fragment) Length = 500 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/49 (34%), Positives = 28/49 (57%) Frame = +2 Query: 197 IPVLYVESTHVLWCMFSRGSDADGEILLHGGSLLEDGVALEEVDRLEVE 343 +PV +T V++ ++ DAD ++L + EDGVA E+VD + E Sbjct: 212 MPVYDFNATDVVYADENQDDDADDPVVLVADTQEEDGVAKEQVDSADSE 260
>RFX2_HUMAN (P48378) DNA-binding protein RFX2| Length = 723 Score = 31.6 bits (70), Expect = 2.1 Identities = 29/99 (29%), Positives = 41/99 (41%) Frame = +2 Query: 284 GGSLLEDGVALEEVDRLEVEAGRHSGHDGEVLLTRDVVEPQRVPQHQVLVLDRTVPLRPS 463 G LL+DGV L +V L++ RH T DVV + + L L S Sbjct: 353 GSFLLQDGVTLHDVKALQLVYRRHCE------ATVDVVMNLQFHYIEKLWLSFWNSKASS 406 Query: 464 SQRVLPFALVHEQPTGPFFTLVVGRDPNLIVCECTPLLR 580 S E P G V+ +D + +C+C P+LR Sbjct: 407 SDGPTSLPASDEDPEG----AVLPKDKLISLCQCDPILR 441
>GSPF_PSEAE (Q00513) General secretion pathway protein F| Length = 405 Score = 31.6 bits (70), Expect = 2.1 Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 2/75 (2%) Frame = +2 Query: 287 GSLLEDGVALEEVDRLEVEAGRHSGHDGEVLLTRDVVEPQRVPQHQVLVLDRTVP--LRP 460 GSL E A E+ R V AG H+GH G VL QR Q + L P L Sbjct: 120 GSLREFPTAFPELYRATVAAGEHAGHLGPVLEQLADYTEQRQQSRQKIQLALLYPVILMV 179 Query: 461 SSQRVLPFALVHEQP 505 +S ++ F L + P Sbjct: 180 ASLAIVGFLLGYVVP 194
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 31.6 bits (70), Expect = 2.1 Identities = 22/61 (36%), Positives = 25/61 (40%) Frame = -1 Query: 602 PAGPRGPAAEEGCIHKQSDLGHALQQE*RMGRWAVRVPEQRGGHAGYLDGEGPSDREQGP 423 PAGPRGPA G K GH +G +R P+ GH G GP P Sbjct: 1049 PAGPRGPAGPSGPAGKDGRTGH----PGTVGPAGIRGPQ---GHQGPAGPPGPPGPPGPP 1101 Query: 422 G 420 G Sbjct: 1102 G 1102
>R1AB_CVMJH (P19751) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p28; p65; p210 (EC 3.4.22.-) (Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2 (p44); 3C-like proteinase Length = 7180 Score = 31.6 bits (70), Expect = 2.1 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Frame = +2 Query: 218 STHVLWCMFSRGSDADGEILLHGGSLLEDGVALEEVDRLEVE-AGRHSGHDGEVLLTRDV 394 +T V++ ++ DAD ++L + EDGVA E+VD + E H+G G+ + DV Sbjct: 950 ATDVVYADENQDDDADDPVVLVADTQEEDGVAREQVDSADSEICVAHTG--GQEMTEPDV 1007 Query: 395 VEPQ 406 V Q Sbjct: 1008 VGSQ 1011
>MURE_SHEON (Q8E9P3) UDP-N-acetylmuramoylalanyl-D-glutamate--2,| 6-diaminopimelate ligase (EC 6.3.2.13) (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) Length = 491 Score = 31.6 bits (70), Expect = 2.1 Identities = 24/103 (23%), Positives = 42/103 (40%) Frame = +2 Query: 149 TMVIPEAYARPHAPGNIPVLYVESTHVLWCMFSRGSDADGEILLHGGSLLEDGVALEEVD 328 T+V+ A+ + L VLWC+F G D D G L A + D Sbjct: 350 TLVVDYAHTPDAIEQALNALRRHCAGVLWCVFGCGGDRD-----KGKRPLMGQAAEQFAD 404 Query: 329 RLEVEAGRHSGHDGEVLLTRDVVEPQRVPQHQVLVLDRTVPLR 457 R+ V + D ++T D+++ P+ + +DR ++ Sbjct: 405 RIMVTSDNARSEDPNQIIT-DIIQGLTHPERALTEVDRVAAIK 446
>MCSP_MOUSE (P15265) Sperm mitochondrial-associated cysteine-rich protein| Length = 143 Score = 30.8 bits (68), Expect = 3.6 Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 9/61 (14%) Frame = +1 Query: 376 PPDKGCGGTPACTTAPGPCSRSDGPSPSK*PACPPL---------CSGTRTAHRPILHSC 528 PP C P C P PC P K P CPP C T P+ C Sbjct: 16 PPKPCCPPKPCCPQKP-PCCPKSPCCPPKSPCCPPKPCPCPPPCPCPCPATCPCPLKPPC 74 Query: 529 C 531 C Sbjct: 75 C 75
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 30.8 bits (68), Expect = 3.6 Identities = 26/76 (34%), Positives = 31/76 (40%) Frame = +1 Query: 376 PPDKGCGGTPACTTAPGPCSRSDGPSPSK*PACPPLCSGTRTAHRPILHSCCRA*PKSDC 555 PP G G P PGP S DGP ++ + PP +G P + P D Sbjct: 838 PP--GSNGNPGPPGPPGP-SGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDD- 893 Query: 556 L*MHPSSAAGPRGPAG 603 PS A GP GP G Sbjct: 894 ---GPSGAEGPPGPQG 906
>YQ35_CAEEL (Q09456) Putative cuticle collagen C09G5.5| Length = 317 Score = 30.4 bits (67), Expect = 4.6 Identities = 25/79 (31%), Positives = 29/79 (36%) Frame = -1 Query: 638 GLQGRPRWHRRQPAGPRGPAAEEGCIHKQSDLGHALQQE*RMGRWAVRVPEQRGGHAGYL 459 GL G+P PAG G G H Q QQE ++ P+ G AG Sbjct: 104 GLDGQPG-----PAGKPGQPGVAGPAHHQ-------QQE------CIKCPQGAPGPAGAP 145 Query: 458 DGEGPSDREQGPGAVVHAG 402 GP PGA H G Sbjct: 146 GNPGPQGPNGNPGAPAHGG 164
>MUC13_MOUSE (P19467) Mucin-13 precursor (Cell surface antigen 114/A10)| (Lymphocyte antigen 64) Length = 573 Score = 30.4 bits (67), Expect = 4.6 Identities = 42/156 (26%), Positives = 57/156 (36%), Gaps = 13/156 (8%) Frame = +1 Query: 97 TEARLGKSPAPTSVYWTHHGDSGSLRTTSCPG---QHPSVVRREHTCIVVHVLTXXXXXX 267 T + G SP PT+V G S TT+ P+ V+ + T Sbjct: 107 TSSSGGASP-PTTVQSQSPGSSSQASTTTSSSGGASPPTTVQSQSPGSSSQASTTTSSSG 165 Query: 268 GDPSPWWVAA*GWGCSRRS*PA*GRSWTTQWA*WGSPPDKGCGGTPACTTAPGPCSRSDG 447 G P V + G S + S TT + SPP +P ++ PGP S G Sbjct: 166 GASPPTTVQSQSPGSSSQV------STTTSSSGGASPPTTVQSQSPGSSSQPGPTQPSGG 219 Query: 448 PSPSK*PA---------C-PPLCSGTRTAHRPILHS 525 S S P+ C P C GT + + LHS Sbjct: 220 ASSSTVPSGGSTGPSDLCNPNPCKGTASCVK--LHS 253
>RUMA_BORPE (Q7VXM6) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)| (23S rRNA(M-5-U1939)-methyltransferase) Length = 466 Score = 30.4 bits (67), Expect = 4.6 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 8/61 (13%) Frame = +2 Query: 323 VDRLEVEAGRHSGHDGEVLLTRDVVEPQRV--------PQHQVLVLDRTVPLRPSSQRVL 478 ++ L++EA + DG+VL + +RV P +++ ++ LRPSSQRV Sbjct: 7 IESLDLEARGIAHRDGKVLFVEGALPGERVTVQTVRRKPSYEIAKVEEV--LRPSSQRVA 64 Query: 479 P 481 P Sbjct: 65 P 65
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 30.4 bits (67), Expect = 4.6 Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Frame = -1 Query: 602 PAGPRGPAAEEGCIHKQSDLGHALQQE*RMGRWAVRVPEQRGGHAGYLDGEGPSDR--EQ 429 P+GPRGPA +G + D G A G R + R GH G GPS E Sbjct: 983 PSGPRGPAGPQGV---RGDKGEA-------GERGARGLDGRKGHNGLSGLPGPSGTPGET 1032 Query: 428 GPGAVV 411 GP V Sbjct: 1033 GPSGSV 1038
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 30.4 bits (67), Expect = 4.6 Identities = 22/67 (32%), Positives = 29/67 (43%) Frame = -1 Query: 602 PAGPRGPAAEEGCIHKQSDLGHALQQE*RMGRWAVRVPEQRGGHAGYLDGEGPSDREQGP 423 PAGP GPA ++G + D G R G ++ P G G +GPS + P Sbjct: 848 PAGPPGPAGKDGPKGARGDTG----APGRAGDPGLQGPAGAPGEKGEPGDDGPSGSDGPP 903 Query: 422 GAVVHAG 402 G AG Sbjct: 904 GPQGLAG 910
>ARGD_VIBPA (Q87L20) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)| Length = 403 Score = 30.4 bits (67), Expect = 4.6 Identities = 30/107 (28%), Positives = 34/107 (31%) Frame = -1 Query: 611 RRQPAGPRGPAAEEGCIHKQSDLGHALQQE*RMGRWAVRVPEQRGGHAGYLDGEGPSDRE 432 RR A GP E KQ G + V V GG A Y DG GP Sbjct: 119 RRYAADVHGPEKSEIIAFKQGFHGRTF--------FTVTV----GGQAAYSDGFGPK--- 163 Query: 431 QGPGAVVHAGVXXXXXXXXXXXXXHCVVQLRPQAGQLLREQPHPQAA 291 PG V H C V + P G+ P P+ A Sbjct: 164 --PGDVTHLPYNDIEALQAHMSDRTCAVMMEPLQGEGGIVPPTPEFA 208
>RUMA_BORPA (Q7W676) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)| (23S rRNA(M-5-U1939)-methyltransferase) Length = 466 Score = 30.0 bits (66), Expect = 6.1 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 8/61 (13%) Frame = +2 Query: 323 VDRLEVEAGRHSGHDGEVLLTRDVVEPQRV--------PQHQVLVLDRTVPLRPSSQRVL 478 ++ L++EA + DG+VL + +RV P +++ ++ LRPSSQRV Sbjct: 7 IESLDLEARGIAHRDGKVLFVEGALPGERVTVQTVRRKPSYEIAKVEEI--LRPSSQRVA 64 Query: 479 P 481 P Sbjct: 65 P 65
>RUMA_BORBR (Q7WI42) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)| (23S rRNA(M-5-U1939)-methyltransferase) Length = 466 Score = 30.0 bits (66), Expect = 6.1 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 8/61 (13%) Frame = +2 Query: 323 VDRLEVEAGRHSGHDGEVLLTRDVVEPQRV--------PQHQVLVLDRTVPLRPSSQRVL 478 ++ L++EA + DG+VL + +RV P +++ ++ LRPSSQRV Sbjct: 7 IESLDLEARGIAHRDGKVLFVEGALPGERVTVQTVRRKPSYEIAKVEEI--LRPSSQRVA 64 Query: 479 P 481 P Sbjct: 65 P 65
>NADB_PYRHO (O57765) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Quinolinate| synthetase B) Length = 464 Score = 30.0 bits (66), Expect = 6.1 Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Frame = +2 Query: 209 YVESTHVLWCMFSRGSDADGEILLHG----GSLLEDGVALEEVDRLEVEAGRH 355 Y+ ++W + S+ S+A + HG G+ LE G + + ++ E G+H Sbjct: 71 YINDEEIVWNVISKSSEAHDFLTSHGVTFTGNELEGGHSYPRIFTIKSETGKH 123
>MURB_CORJK (Q4JSV7) UDP-N-acetylenolpyruvoylglucosamine reductase (EC| 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase) Length = 434 Score = 30.0 bits (66), Expect = 6.1 Identities = 19/53 (35%), Positives = 27/53 (50%) Frame = +2 Query: 470 RVLPFALVHEQPTGPFFTLVVGRDPNLIVCECTPLLRRVLGVQQAGGGASGDD 628 +V+ F H QP L+VG NL+V E + + V+ + AGGG G D Sbjct: 69 QVVSFLDAHTQPL-----LIVGGGSNLVVGEGDEVSQLVVVLMSAGGGEGGVD 116
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 30.0 bits (66), Expect = 6.1 Identities = 25/67 (37%), Positives = 27/67 (40%) Frame = -1 Query: 602 PAGPRGPAAEEGCIHKQSDLGHALQQE*RMGRWAVRVPEQRGGHAGYLDGEGPSDREQGP 423 PAGPRGPA G I K GH +G VR + G AG GP GP Sbjct: 1055 PAGPRGPAGPSGPIGKDGRSGHPGP----VGPAGVRGSQGSQGPAGPPGPPGP----PGP 1106 Query: 422 GAVVHAG 402 V G Sbjct: 1107 PGVSGGG 1113
>KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-associated protein| 5.9) (Ultrahigh sulfur keratin-associated protein 5.9) (Keratin, cuticle, ultrahigh sulfur 1) (Keratin, ultra high-sulfur matrix protein A) (UHS keratin A) (UHS KerA) Length = 169 Score = 29.6 bits (65), Expect = 7.9 Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 3/84 (3%) Frame = +1 Query: 391 CGGTPACTTAPGPCSRSDGPSPSK*PACPPLCSGTRTAHRPILHSCCRA*PKSDCL*MHP 570 CG + C ++ G C S G S C P C +P+ C A S C Sbjct: 4 CGCSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVC-CCVPACSCSSCGKRGC 62 Query: 571 SSAAGPR---GPAGWRRCQRGRPC 633 S G + G G +C +PC Sbjct: 63 GSCGGSKGGCGSCGCSQCSCCKPC 86
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 7.9 Identities = 27/82 (32%), Positives = 31/82 (37%), Gaps = 2/82 (2%) Frame = +1 Query: 370 GSPPDKGCGGTPACTTAPGP--CSRSDGPSPSK*PACPPLCSGTRTAHRPILHSCCRA*P 543 G P + G G P APG + G PA PP G A P+ A Sbjct: 996 GPPGEAGREGAPGAEGAPGRDGAAGPKGDRGETGPAGPPGAPGAPGAPGPV----GPAGK 1051 Query: 544 KSDCL*MHPSSAAGPRGPAGWR 609 D P+ AGP GPAG R Sbjct: 1052 NGDRGETGPAGPAGPPGPAGAR 1073
>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein| Length = 2480 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = +1 Query: 373 SPPDKGCGGTPACTTAPGPCSRSDGPSPSK*PACPPLCSGTRTA 504 SPP G TP PGP + GP+P + P P SG A Sbjct: 266 SPP----GSTPRLPERPGPSNPPVGPAPGRHPQDTPAQSGPLVA 305
>ARGD_VIBCH (Q9KNW2) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)| Length = 403 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/52 (30%), Positives = 19/52 (36%) Frame = -1 Query: 479 GGHAGYLDGEGPSDREQGPGAVVHAGVXXXXXXXXXXXXXHCVVQLRPQAGQ 324 GG A Y DG GP PG +VH C V + P G+ Sbjct: 151 GGQATYSDGFGPK-----PGDIVHLPYNDLAALQAQISDRTCAVMMEPLQGE 197
>IRF6_HUMAN (O14896) Interferon regulatory factor 6 (IRF-6)| Length = 467 Score = 29.6 bits (65), Expect = 7.9 Identities = 12/40 (30%), Positives = 19/40 (47%) Frame = -2 Query: 481 GEDTLATWTERDRPIENKDLVLWYTLGFHHIPCQEDFPIM 362 G A W E+D ++ +D HH+P Q+ FP + Sbjct: 127 GSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFL 166 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 112,502,893 Number of Sequences: 219361 Number of extensions: 2841642 Number of successful extensions: 10491 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 8648 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10368 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
