| Clone Name | rbaal15m21 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Y2191_MYCTU (Q10384) Hypothetical protein Rv2191/MT2247 | 28 | 5.2 | 2 | CUBN_CANFA (Q9TU53) Cubilin precursor | 28 | 8.9 |
|---|
>Y2191_MYCTU (Q10384) Hypothetical protein Rv2191/MT2247| Length = 645 Score = 28.5 bits (62), Expect = 5.2 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = +3 Query: 3 RKRAXET---AASTDLYQCAHPFLPD*QSIRELRLSATH 110 RKR E A+S D +CAHP +RELR+ +TH Sbjct: 285 RKRMTEMVMLASSIDHVECAHPLE---AGVRELRMLSTH 320
>CUBN_CANFA (Q9TU53) Cubilin precursor| Length = 3620 Score = 27.7 bits (60), Expect = 8.9 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = +3 Query: 36 DLYQCAHPFLPD*QSIRELRLSATHTMHDTSTELHLFTSQL 158 DL +C H + + I +L+ SA + + S+++H S+L Sbjct: 74 DLGECLHQIQKNKEDITDLKRSAVNVPQNISSQIHQLNSKL 114 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,059,196 Number of Sequences: 219361 Number of extensions: 323112 Number of successful extensions: 859 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 848 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 859 length of database: 80,573,946 effective HSP length: 30 effective length of database: 73,993,116 effective search space used: 1775834784 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)