>ACPH_RAT (P13676) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)|
            (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase)
          Length = 732

 Score =  125 bits (315), Expect = 8e-29
 Identities = 59/142 (41%), Positives = 89/142 (62%)
 Frame = -2

Query: 652  LTTHLIGQAPETFVAAAARNPVCNLQLMVGTTDIPDWCYLEVYGKEGKTCFTESPLADTL 473
            L+ HLIGQ PET+ A  ARNPV N+  M+G+TDIPDWC +E       +C    P  +  
Sbjct: 592  LSCHLIGQYPETYSACIARNPVINIASMMGSTDIPDWCMVETGFPYSNSCL---PDLNVW 648

Query: 472  TQFYQKSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHG 293
             +   KSPI +I +VKTP L +LG +D RVP   G++Y RALK R V  +++++P+  H 
Sbjct: 649  EEMLDKSPIKYIPQVKTPVLLMLGQEDRRVPFKQGMEYYRALKARNVPVRLLLYPKSNHA 708

Query: 292  LDKPQSDFESFLNIGVWFKKYM 227
            L + +++ +SF+N  +W   ++
Sbjct: 709  LSEVEAESDSFMNAVLWLHTHL 730

>ACPH_HUMAN (P13798) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)|
            (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase)
            (Oxidized protein hydrolase) (OPH) (DNF15S2 protein)
          Length = 732

 Score =  124 bits (310), Expect = 3e-28
 Identities = 58/142 (40%), Positives = 87/142 (61%)
 Frame = -2

Query: 652  LTTHLIGQAPETFVAAAARNPVCNLQLMVGTTDIPDWCYLEVYGKEGKTCFTESPLADTL 473
            ++ HLIGQ PET+ A  ARNPV N+  M+G+TDIPDWC +E        C    P     
Sbjct: 592  ISCHLIGQYPETYRACVARNPVINIASMLGSTDIPDWCVVEAGFPFSSDCL---PDLSVW 648

Query: 472  TQFYQKSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHG 293
             +   KSPI +I +VKTP L +LG +D RVP   G++Y RALK R V  +++++P+  H 
Sbjct: 649  AEMLDKSPIRYIPQVKTPLLLMLGQEDRRVPFKQGMEYYRALKTRNVPVRLLLYPKSTHA 708

Query: 292  LDKPQSDFESFLNIGVWFKKYM 227
            L + + + +SF+N  +W + ++
Sbjct: 709  LSEVEVESDSFMNAVLWLRTHL 730

>APEH_MOUSE (Q8R146) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)|
            (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase)
          Length = 732

 Score =  123 bits (309), Expect = 4e-28
 Identities = 63/146 (43%), Positives = 89/146 (60%), Gaps = 4/146 (2%)
 Frame = -2

Query: 652  LTTHLIGQAPETFVAAAARNPVCNLQLMVGTTDIPDWCYLEVYGKEGKTCFTES----PL 485
            L+ HLIGQ PET+ A  ARNPV N+  M+GTTDIPDWC +E       T F  S    P 
Sbjct: 592  LSCHLIGQYPETYSACIARNPVINIVSMMGTTDIPDWCMVE-------TGFPYSNDYLPD 644

Query: 484  ADTLTQFYQKSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPE 305
             + L +   KSPI +I +VKTP L +LG +D RVP   GL+Y  ALK R V  +++++P+
Sbjct: 645  LNVLEEMLDKSPIKYIPQVKTPVLLMLGQEDRRVPFKQGLEYYHALKARNVPVRLLLYPK 704

Query: 304  DIHGLDKPQSDFESFLNIGVWFKKYM 227
              H L + + + +SF+N  +W   ++
Sbjct: 705  STHALSEVEVESDSFMNTVLWLHTHL 730

>ACPH_PIG (P19205) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)|
           (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase)
          Length = 732

 Score =  118 bits (295), Expect = 2e-26
 Identities = 56/137 (40%), Positives = 80/137 (58%)
 Frame = -2

Query: 652 LTTHLIGQAPETFVAAAARNPVCNLQLMVGTTDIPDWCYLEVYGKEGKTCFTESPLADTL 473
           L+ HLIGQ PET+ A   RNPV N+  M+G+TDIPDWC +E        C    P     
Sbjct: 592 LSCHLIGQYPETYSACVVRNPVINIASMMGSTDIPDWCMVEAGFSYSSDCL---PDLSVW 648

Query: 472 TQFYQKSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHG 293
                KSPI +  +VKTP L +LG +D RVP   G++Y R LK R V  +++++P+  H 
Sbjct: 649 AAMLDKSPIKYAPQVKTPLLLMLGQEDRRVPFKQGMEYYRVLKARNVPVRLLLYPKSTHA 708

Query: 292 LDKPQSDFESFLNIGVW 242
           L + + + +SF+N  +W
Sbjct: 709 LSEVEVESDSFMNAVLW 725

>YUXL_BACSU (P39839) Probable peptidase yuxL (EC 3.4.21.-)|
          Length = 657

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 7/149 (4%)
 Frame = -2

Query: 652 LTTHLIGQAPETFVAAAARNPVCNLQLMVGTTDI----PDWCYLEVYGKEGKTCFTESPL 485
           +T  ++GQ    F AA  +  + N     G +DI     DW               E  +
Sbjct: 523 MTNWIVGQT-NRFKAAVTQRSISNWISFHGVSDIGYFFTDWQL-------------EHDM 568

Query: 484 ADTLTQFYQKSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPE 305
            +   + + +SP+ + + V+TP L L G +D R P+    Q   ALK+ G +TK++ FP 
Sbjct: 569 FEDTEKLWDRSPLKYAANVETPLLILHGERDDRCPIEQAEQLFIALKKMGKETKLVRFPN 628

Query: 304 DIHGLDK---PQSDFESFLNIGVWFKKYM 227
             H L +   P+   +    I  WF +++
Sbjct: 629 ASHNLSRTGHPRQRIKRLNYISSWFDQHL 657

>DPP5_ASPOR (Q9Y8E3) Dipeptidyl-peptidase 5 precursor (EC 3.4.14.-)|
           (Dipeptidyl-peptidase V) (DPP V) (DppV) (Alanyl
           dipeptidyl peptidase)
          Length = 725

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 24/78 (30%), Positives = 37/78 (47%)
 Frame = -2

Query: 463 YQKSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLDK 284
           +  S    I K  TP L +    D R+PVS GL     L+ERGV ++ + FP++ H +  
Sbjct: 623 WDPSAPERILKFSTPMLIIHSDLDYRLPVSEGLSLFNILQERGVPSRFLNFPDENHWVQN 682

Query: 283 PQSDFESFLNIGVWFKKY 230
            ++       +  W  KY
Sbjct: 683 KENSLVWHQQVLGWLNKY 700

>DPP5_ASPFU (O13479) Dipeptidyl-peptidase 5 precursor (EC 3.4.14.-)|
           (Dipeptidyl-peptidase V) (DPP V) (DppV)
          Length = 721

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 24/78 (30%), Positives = 38/78 (48%)
 Frame = -2

Query: 463 YQKSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLDK 284
           +  S    I +  TP L +   KD R+PV+ GL     L+ERGV ++ + FP++ H +  
Sbjct: 620 WDPSAPERILQFATPMLVIHSDKDYRLPVAEGLSLFNVLQERGVPSRFLNFPDENHWVVN 679

Query: 283 PQSDFESFLNIGVWFKKY 230
           P++          W  KY
Sbjct: 680 PENSLVWHQQALGWINKY 697

>YL31_CAEEL (P34422) Hypothetical protein F44B9.1 in chromosome III|
          Length = 740

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 22/84 (26%), Positives = 45/84 (53%)
 Frame = -2

Query: 457 KSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLDKPQ 278
           +SP+    +V  P + + GA D RV  +   Q+  AL+++ +    +++P++ HG+ KPQ
Sbjct: 583 RSPLFFADRVTKPIMIIQGANDPRVKQAESDQFVAALEKKHIPVTYLLYPDEGHGVRKPQ 642

Query: 277 SDFESFLNIGVWFKKYMSK*TLGF 206
           +  E   +I  + ++ +   T  F
Sbjct: 643 NSMEQHGHIETFLQQCLGGETQPF 666

>DPP5_TRISH (Q8J1L4) Dipeptidyl-peptidase 5 precursor (EC 3.4.14.-)|
           (Dipeptidyl-peptidase V) (DPP V) (DppV) (Allergen Tri s
           4)
          Length = 726

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 18/70 (25%), Positives = 37/70 (52%)
 Frame = -2

Query: 439 ISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLDKPQSDFESF 260
           ++K  TP L +    D R+ V+ G+     L+E+G+ ++ + FP++ H + KP++     
Sbjct: 626 VAKWSTPQLVIHNDSDFRLSVAEGVGLFNVLQEKGIPSRFLNFPDETHWVTKPENSLVWH 685

Query: 259 LNIGVWFKKY 230
             +  W  K+
Sbjct: 686 QQVLGWINKW 695

>DPP5_ARTBE (Q8J1M3) Dipeptidyl-peptidase 5 precursor (EC 3.4.14.-)|
           (Dipeptidyl-peptidase V) (DPP V) (DppV) (Allergen Tri m
           4)
          Length = 726

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 18/70 (25%), Positives = 37/70 (52%)
 Frame = -2

Query: 439 ISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLDKPQSDFESF 260
           ++K  TP L +    D R+ V+ G+     L+E+G+ ++ + FP++ H + KP++     
Sbjct: 626 VAKWSTPQLVIHNDFDFRLSVAEGVGLFNVLQEKGIPSRFLNFPDETHWVTKPENSLVWH 685

Query: 259 LNIGVWFKKY 230
             +  W  K+
Sbjct: 686 QQVLGWINKW 695

>DPP5_TRIRU (Q9UW98) Dipeptidyl-peptidase 5 precursor (EC 3.4.14.-)|
           (Dipeptidyl-peptidase V) (DPP V) (DppV) (Allergen Tri r
           4)
          Length = 726

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 19/70 (27%), Positives = 37/70 (52%)
 Frame = -2

Query: 439 ISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLDKPQSDFESF 260
           ++K  TP L +    D R+ V+ G+     L+E+GV ++ + FP++ H + KP++     
Sbjct: 626 VAKWSTPQLVVHNDFDFRLSVAEGVGLFNVLQEKGVPSRFLNFPDETHWVTKPENSLVWH 685

Query: 259 LNIGVWFKKY 230
             +  W  K+
Sbjct: 686 QQVLGWVNKW 695

>XYNB_BUTFI (P26223) Endo-1,4-beta-xylanase B (EC 3.2.1.8) (Xylanase B)|
           (1,4-beta-D-xylan xylanohydrolase B)
          Length = 635

 Score = 38.1 bits (87), Expect = 0.023
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
 Frame = -2

Query: 511 KTCFTESPLADTLTQFYQKSPISHISKVKTPTLFLLGAK-DLRVPVSNGLQYARALKERG 335
           +T    +P  + LT F  +  +    K  TP  F+   + D  VPV N   +A AL+E+ 
Sbjct: 537 RTLLGANPTDEELTYFSLEKQV----KDNTPPCFIWQTEEDSVVPVENSYLFANALREKK 592

Query: 334 VDTKIIVFPEDIHGLDKPQSDFES 263
           +     VFP   HGL     +F S
Sbjct: 593 IPFAHYVFPRGFHGLTVANDEFFS 616

>DLHH_YERPE (Q8ZAL4) Putative carboxymethylenebutenolidase (EC 3.1.1.45)|
           (Dienelactone hydrolase) (DLH)
          Length = 267

 Score = 37.0 bits (84), Expect = 0.051
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = -2

Query: 472 TQFYQKSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHG 293
           T F  K P+     +  P L L G KD  +P  +     +AL+    D +IIV+PE  H 
Sbjct: 168 TLFLPKYPVDVAIDLCAPVLGLYGGKDTSIPAEHIETMRQALRAANADAEIIVYPEAGHA 227

Query: 292 LD 287
            +
Sbjct: 228 FN 229

>DLHH_ECOLI (P56262) Putative carboxymethylenebutenolidase (EC 3.1.1.45)|
           (Dienelactone hydrolase) (DLH)
          Length = 271

 Score = 33.5 bits (75), Expect = 0.57
 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
 Frame = -2

Query: 457 KSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLD--- 287
           K P+   + +  P L L G +D  +P  +     +AL+      +IIV+P+  H  +   
Sbjct: 183 KQPVDIATDLNAPILGLYGGQDNSIPQESVETMRQALRAANAKAEIIVYPDAGHAFNADY 242

Query: 286 KPQ----SDFESFLNIGVWFKKYMSK*TL 212
           +P     S  + +  +  WFK+Y  K +L
Sbjct: 243 RPSYHAASAEDGWQRMLEWFKQYGGKKSL 271

>RS8_COXBU (Q83ER2) 30S ribosomal protein S8|
          Length = 130

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 24/69 (34%), Positives = 34/69 (49%)
 Frame = -2

Query: 538 YLEVYGKEGKTCFTESPLADTLTQFYQKSPISHISKVKTPTLFLLGAKDLRVPVSNGLQY 359
           Y+  Y +EG    T++ L  TL     +S IS I +V +P L +  +KD    V NGL  
Sbjct: 44  YIVDYREEGD--LTKAQLVITLKYHEGESVISEIRRVSSPALQVYKSKDELPKVKNGLGI 101

Query: 358 ARALKERGV 332
           A     +GV
Sbjct: 102 AIISTSKGV 110

>DLHH_METEX (P71505) Putative carboxymethylenebutenolidase precursor (EC|
           3.1.1.45) (Dienelactone hydrolase) (DLH)
          Length = 291

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
 Frame = -2

Query: 457 KSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLD--- 287
           K+P+   + +K P L L G  D  +PV+   +   A +  G     +V+PE  H      
Sbjct: 206 KNPVDVAADLKAPVLGLYGGADQGIPVATIDRMKEACRAAGKTCDFVVYPEAGHAFHADY 265

Query: 286 ----KPQSDFESFLNIGVWFKKY 230
               + +   + +  +  WF++Y
Sbjct: 266 RPSYRAEPAQDGWKRLQDWFRQY 288

>DLHH_ECO57 (Q8X8L4) Putative carboxymethylenebutenolidase (EC 3.1.1.45)|
           (Dienelactone hydrolase) (DLH)
          Length = 271

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
 Frame = -2

Query: 457 KSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLD--- 287
           K P+   + +  P L L G  D  +P  +     +AL+      +IIV+P+  H  +   
Sbjct: 183 KQPVDIATDLNAPVLGLYGGLDNSIPQESVETMRQALRAANAKAEIIVYPDAGHAFNADY 242

Query: 286 KPQ----SDFESFLNIGVWFKKYMSK*TL 212
           +P     S  + +  +  WFK+Y  K +L
Sbjct: 243 RPSYHAASAEDGWQRMLEWFKQYGGKKSL 271

>APEH_AERPE (Q9YBQ2) Acylamino-acid-releasing enzyme (EC 3.4.19.1) (AARE)|
           (Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase)
          Length = 582

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = -2

Query: 457 KSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIHGLD 287
           +SPI+H+ ++K P   +    D R P+   L+    L  RG   +  + P+  H ++
Sbjct: 503 RSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAIN 559

>USF_AQUPY (P46209) Protein usf|
          Length = 231

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
 Frame = -2

Query: 487 LADTLTQFYQKSPISHIS--KVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIV 314
           L D    FY    I+ I    +K P  F+L  KD  V     +  A+ + + GVD K+ V
Sbjct: 134 LIDASVPFYGLPQITKIDAENIKVPIFFILAEKDEFVNNDEVIDIAKKVWKNGVDVKVKV 193

Query: 313 FPEDIHG-LDKPQSDF------ESFLNIGV-WFKKYMS 224
           +    H  L++ + D       +   N+ V +FK+Y++
Sbjct: 194 YSGVTHAFLNEKREDVYDPCRAQDAWNLTVAFFKEYLT 231

>COQ8_CAEEL (Q18486) Ubiquinone biosynthesis protein coq-8|
          Length = 755

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = -2

Query: 457 KSPISHISKVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVFPEDIH 296
           KS I  I +++T    +LG +    PVS+  +  R LK  GV  ++++ PE IH
Sbjct: 181 KSAIPAIGQIETLIQSILGVQG---PVSSVSRAPRKLKLEGVTDQVVLEPETIH 231

>CHEB_CLOAB (Q97GZ3) Chemotaxis response regulator protein-glutamate|
           methylesterase (EC 3.1.1.61)
          Length = 345

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -2

Query: 433 KVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIVF 311
           KV  P +  L   D+ +PV NG++  +A+K   +D  IIVF
Sbjct: 46  KVMKPDVITL---DIEMPVMNGIETLKAVKSLKIDIPIIVF 83

>PEPX_STRAW (Q82MI6) Putative Xaa-Pro dipeptidyl-peptidase (EC 3.4.14.11)|
           (X-Pro dipeptidyl-peptidase) (X-prolyl-dipeptidyl
           aminopeptidase) (X-PDAP)
          Length = 676

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
 Frame = -2

Query: 550 PDWCYLEVYGKEGKT--------CFTESPLADTLTQFY-QKSPISHISKVKTPTLFLLGA 398
           PDW    V   + +T           E+P     T  + ++  +   SKV+     + G 
Sbjct: 269 PDWLSDYVDSPDARTKCAAVQRKLVDEAPRTGDWTSLWTERDYVKDASKVRASVFLVHGM 328

Query: 397 KDLRVPVSNGLQYARALKERGVDTKI 320
           +DL V   N  Q+  AL + GV+ KI
Sbjct: 329 QDLNVRAKNFGQWWSALAKNGVERKI 354

>DLHH_AQUAE (O67802) Putative carboxymethylenebutenolidase (EC 3.1.1.45)|
           (Dienelactone hydrolase) (DLH)
          Length = 231

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
 Frame = -2

Query: 487 LADTLTQFYQKSPISHIS--KVKTPTLFLLGAKDLRVPVSNGLQYARALKERGVDTKIIV 314
           + D    FY    ++ I+   +K P  F+L  KD  V     +  A+ + + GVD ++ V
Sbjct: 134 MVDASLPFYGLPQLTQINAENIKVPIFFILAEKDEFVNNDEVIDIAKTVWKNGVDVQVKV 193

Query: 313 FPEDIH 296
           F    H
Sbjct: 194 FSGVTH 199

>PRP45_CANGA (Q6FIT9) Pre-mRNA-splicing factor PRP45 (Pre-mRNA-processing|
           protein 45)
          Length = 414

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = -1

Query: 356 KGFEGEGGRHQNYCLPRRYSWTRQATVRL*ELPQHRGLVQEVHEQINIG 210
           +G   EGGRHQN  + +     + A  RL EL   +G  +EV E++ +G
Sbjct: 277 RGSRFEGGRHQNKKIKKEEPPIKSAAERLKELAYAQG--REVSEKVILG 323


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,362,161
Number of Sequences: 219361
Number of extensions: 2047100
Number of successful extensions: 4678
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4672
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)