ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal16b14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1INSR_DROME (P09208) Insulin-like receptor precursor (EC 2.7.10.1... 29 3.3
2ZPBP1_PIG (Q29108) Zona pellucida-binding protein 1 precursor (S... 28 4.3
3DNAA_SPICI (P34028) Chromosomal replication initiator protein dnaA 28 7.4
4RRPL_HANTV (P23456) RNA-directed RNA polymerase (EC 2.7.7.48) (L... 28 7.4
5ZPBP1_HUMAN (Q9BS86) Zona pellucida-binding protein 1 precursor ... 28 7.4
6M3LK7_DROME (P83104) Putative mitogen-activated protein kinase k... 27 9.7

>INSR_DROME (P09208) Insulin-like receptor precursor (EC 2.7.10.1) (DIR) (DInr)|
           (dIRH) [Contains: Insulin-like receptor alpha subunit;
           Insulin-like receptor beta 1 subunit; Insulin-like
           receptor beta 2 subunit]
          Length = 2144

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
 Frame = -1

Query: 248 LQAGCLLYEVANYAICRNIELIF*KLXKQTREWRNCIGTGSISS--LLPGSYTATDGIHS 75
           L A C L+   N  +C N +L   K  ++ R   NCI   +  S   L G     +G  S
Sbjct: 508 LNASCQLHN--NRRLCWNSKLCQTKCPEKCRN--NCIDEHTCCSQDCLGGCVIDKNGNES 563

Query: 74  CILCNRNFFFILCL*AC 24
           CI C    F  +C+ +C
Sbjct: 564 CISCRNVSFNNICMDSC 580



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>ZPBP1_PIG (Q29108) Zona pellucida-binding protein 1 precursor (Sp38)|
          Length = 350

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 110 PGSYTATDGIHSCILCNRNFFF 45
           PG+Y + DGIH C+ CN +  F
Sbjct: 324 PGTYNSRDGIH-CLQCNSSLVF 344



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>DNAA_SPICI (P34028) Chromosomal replication initiator protein dnaA|
          Length = 450

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +2

Query: 200 GKWHNSLLHTINNRLEEIYKTD 265
           GK H  LLH I N++ EIYKT+
Sbjct: 151 GKTH--LLHAIENKVNEIYKTN 170



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>RRPL_HANTV (P23456) RNA-directed RNA polymerase (EC 2.7.7.48) (L protein)|
          Length = 2151

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 13/42 (30%), Positives = 27/42 (64%)
 Frame = +2

Query: 188  VLYSGKWHNSLLHTINNRLEEIYKTDV**WCIMSRRIREHAE 313
            +L++G  +N L + + + L+++YKTD      MSR++R + +
Sbjct: 991  MLHNGLPNNKLKNCVIDALKQVYKTDF----FMSRKLRNYID 1028



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>ZPBP1_HUMAN (Q9BS86) Zona pellucida-binding protein 1 precursor (Sp38)|
          Length = 351

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 110 PGSYTATDGIHSCILCNRNFFF 45
           PGSY   DGIH C+ CN +  +
Sbjct: 325 PGSYNPRDGIH-CLQCNSSLVY 345



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>M3LK7_DROME (P83104) Putative mitogen-activated protein kinase kinase kinase|
           7-like (EC 2.7.11.25)
          Length = 393

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 16/60 (26%), Positives = 30/60 (50%)
 Frame = -2

Query: 262 CFVYFFKPVVYCMK*RIMPFAGI*NSSFRNYXSRPVSGATALELVLSRHCCQEVTQQLME 83
           C VY F  +++ +  R +P++ + N + +    + +S    L +   R  C E  +QLME
Sbjct: 187 CDVYSFGIMLWELMTRQLPYSHLENPNSQYAIMKAISSGEKLPMEAVRSDCPEGIKQLME 246


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,385,658
Number of Sequences: 219361
Number of extensions: 816735
Number of successful extensions: 1765
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1765
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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