ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal16b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X05167.1|HVLEU Barley gene for thiol protease aleurain 622 e-175
2dbj|AK066748.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 3e-26
3dbj|D90408.1|RICOZC Oryza sativa (japonica cultivar-group) mRNA ... 119 7e-24
4emb|AJ249847.1|LMU249847 Lolium multiflorum mRNA for cysteine pr... 107 3e-20
5dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
6dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
7gb|AY106223.1| Zea mays PCO114759 mRNA sequence 96 1e-16
8emb|X99936.1|ZMSEE1 Z.mays mRNA for cysteine proteinase, See1 88 2e-14
9dbj|D45403.1|MZECYPA Corn mRNA for cysteine proteinase, clone CC... 88 2e-14
10emb|Y11003.1|NTPPCYSPT N.tabacum mRNA for putative pre-pro-cyste... 84 4e-13
11gb|DQ084022.1| Nicotiana benthamiana cysteine proteinase aleuran... 84 4e-13
12dbj|AB032168.1| Nicotiana tabacum NTCP-23 mRNA for cysteine prot... 84 4e-13
13gb|AY017412.1| Nicotiana tabacum NTCP23-like cysteine proteinase... 84 4e-13
14ref|NM_125429.2| Arabidopsis thaliana AALP; cysteine-type endope... 66 9e-08
15gb|AF083703.1| Arabidopsis thaliana clone sps232 unknown mRNA 66 9e-08
16gb|BT000676.1| Arabidopsis thaliana clone RAFL08-12-G17 (R11172)... 66 9e-08
17gb|BT000674.1| Arabidopsis thaliana clone RAFL05-19-H13 (R10283)... 66 9e-08
18gb|BT000673.1| Arabidopsis thaliana clone RAFL07-10-L02 (R10707)... 66 9e-08
19gb|AF360273.1| Arabidopsis thaliana putative cysteine proteinase... 66 9e-08
20gb|AF454960.1|AF454960 Brassica oleracea senescence-associated c... 66 9e-08
21emb|BX829791.1|CNS0A01S Arabidopsis thaliana Full-length cDNA Co... 66 9e-08
22gb|AY088662.1| Arabidopsis thaliana clone 8989 mRNA, complete se... 66 9e-08
23gb|AF233883.1|AF233883 Arabidopsis thaliana AALP protein mRNA, c... 66 9e-08
24ref|NM_114400.2| Arabidopsis thaliana cysteine-type endopeptidas... 64 4e-07
25ref|NM_001035735.1| Arabidopsis thaliana cysteine-type endopepti... 64 4e-07
26gb|DQ209288.1| Brassica napus cysteine protease mRNA, complete cds 64 4e-07
27emb|AL132953.2|ATF18N11 Arabidopsis thaliana DNA chromosome 3, B... 64 4e-07
28emb|AJ844005.1| Plantago major partial mRNA for cysteine proteas... 64 4e-07
29gb|AY091771.1| Arabidopsis thaliana AT3g45310/F18N11_70 mRNA, co... 64 4e-07
30gb|AY496105.1| Capsicum annuum alternative oxidase 1a precursor ... 60 6e-06
31gb|AY383240.1| Glycine max cysteine proteinase mRNA, partial cds 58 2e-05
32ref|NM_001037029.1| Arabidopsis thaliana AALP; cysteine-type end... 56 9e-05
33dbj|AB011483.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 56 9e-05
34gb|AY111351.1| Zea mays CL1876_2 mRNA sequence 54 3e-04
35emb|X93220.2|CACG2 Cicer arietinum partial mRNA for cysteine pro... 54 3e-04
36gb|DQ492683.1| Medicago sativa cysteine protease (CP1) mRNA, com... 52 0.001
37gb|U31094.1|PHU31094 Petunia hybrida thiol protease homolog P21 ... 52 0.001
38emb|Z68291.1|PSRNACP P.sativum mRNA for cysteine protease 50 0.005
39emb|AJ278699.1|PSA278699 Pisum sativum mRNA for protease (elsa g... 50 0.005
40gb|U93166.1|PAU93166 Prunus armeniaca cysteine protease mRNA, co... 46 0.083
41gb|DQ212052.1| Anopheles quadriannulatus isolate qdch64a defensi... 42 1.3
42dbj|AP001528.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.3
43emb|CR478208.13| Zebrafish DNA sequence from clone CH211-149M3 i... 40 5.1
44gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 5.1
45emb|X75749.1|VSCYSPRO V.sativa L. mRNA for cysteine protease 40 5.1
46emb|CR394547.7| Zebrafish DNA sequence from clone CH211-127P22 i... 40 5.1
47gb|AC007070.5| Arabidopsis thaliana chromosome 2 clone T22F11 ma... 40 5.1
48gb|AC110081.3| Homo sapiens BAC clone RP11-453M2 from 4, complet... 40 5.1
49gb|AC092624.2| Homo sapiens BAC clone RP11-261J9 from 2, complet... 40 5.1
50gb|AC115289.6| Mus musculus BAC clone RP23-57G16 from 13, comple... 40 5.1 
>emb|X05167.1|HVLEU Barley gene for thiol protease aleurain
          Length = 5372

 Score =  622 bits (314), Expect = e-175
 Identities = 326/331 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1    gatgcctgggtgaactatgaatgggccattttatttgtcccggaaataaaatgtcgtaga 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5327 gatgcctgggtgaactatgaatgggccattttatttgtcccggaaataaaatgtcgtaga 5268

                                                                        
Query: 61   catacatgagaaaccctaataaattgctggatcacctacatatatagccatacaaccata 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5267 catacatgagaaaccctaataaattgctggatcacctacatatatagccatacaaccata 5208

                                                                        
Query: 121  cagaggaagagtacacgcacggggctcactntntccgtagtccttgtggtttgtattcac 180
            ||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||
Sbjct: 5207 cagaggaagagtacacgcacggggctcactgcaaccgtagtccttgtggtttgtattcac 5148

                                                                        
Query: 181  agcaaagtttcagttcctgtataccccaatcttcaggttcttgttcgggctgaaaacacc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5147 agcaaagtttcagttcctgtataccccaatcttcaggttcttgttcgggctgaaaacacc 5088

                                                                        
Query: 241  ttattcatgtctggcgaatcgagactgtactcgccgatttggcgcttcttcatgccgcca 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5087 ttattcatgtctggcgaatcgagactgtactcgccgatttggcgcttcttcatgccgcca 5028

                                           
Query: 301  cgacagggtaggaggcgcangtagcaatagc 331
            ||||||||||||||||||| |||||||||||
Sbjct: 5027 cgacagggtaggaggcgcaggtagcaatagc 4997



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 50/51 (98%)
 Strand = Plus / Minus

                                                               
Query: 333  cacatgttcttgcccatttccatcttgaagtaaccattgtnaccccagtcg 383
            |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 4897 cacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtcg 4847
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>dbj|AK066748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074D19, full
            insert sequence
          Length = 1486

 Score =  127 bits (64), Expect = 3e-26
 Identities = 74/78 (94%)
 Strand = Plus / Minus

                                                                        
Query: 305  agggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatcttgaagta 364
            ||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1140 agggtaggatgcgcaagtagcaataccgcacatgttcttgcccatttccatcttgaagta 1081

                              
Query: 365  accattgtnaccccagtc 382
            |||||||| |||||||||
Sbjct: 1080 accattgtcaccccagtc 1063



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 174  tattcacagcaaagtttcagttcctgtataccc 206
            ||||||||  |||||||||||| ||||||||||
Sbjct: 1260 tattcacaagaaagtttcagtttctgtataccc 1228
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>dbj|D90408.1|RICOZC Oryza sativa (japonica cultivar-group) mRNA for oryzain gamma,
            complete cds
          Length = 1468

 Score =  119 bits (60), Expect = 7e-24
 Identities = 73/78 (93%)
 Strand = Plus / Minus

                                                                        
Query: 305  agggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatcttgaagta 364
            ||||||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 1123 agggtaggatgcgcaagtagcaataccgcacatgttcttgcccatttccatcgtgaagta 1064

                              
Query: 365  accattgtnaccccagtc 382
            |||||||| |||||||||
Sbjct: 1063 accattgtcaccccagtc 1046



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 174  tattcacagcaaagtttcagttcctgtataccc 206
            ||||||||  |||||||||||| ||||||||||
Sbjct: 1247 tattcacaagaaagtttcagtttctgtataccc 1215
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>emb|AJ249847.1|LMU249847 Lolium multiflorum mRNA for cysteine protease (see1 gene)
          Length = 1345

 Score =  107 bits (54), Expect = 3e-20
 Identities = 85/96 (88%)
 Strand = Plus / Minus

                                                                        
Query: 288  cttcatgccgccacgacagggtaggaggcgcangtagcaatagcgcacatgttcttgccc 347
            ||||||||||||| || ||||||||| ||||| ||||| | ||| |||||||||||||||
Sbjct: 1117 cttcatgccgccaagatagggtaggacgcgcaggtagcgacagcacacatgttcttgccc 1058

                                                
Query: 348  atttccatcttgaagtaaccattgtnaccccagtcg 383
            |||||||||||||||||||| |  | ||||||||||
Sbjct: 1057 atttccatcttgaagtaaccgtcttcaccccagtcg 1022



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 75/88 (85%), Gaps = 1/88 (1%)
 Strand = Plus / Minus

                                                                        
Query: 174  tattcacagcaaagtttcagttcctgtataccccaatcttcaggttcttgttcgggctga 233
            |||||||| ||| ||  ||||| |||||||| || ||||||| || |||| |||||||||
Sbjct: 1226 tattcacaacaaggtcgcagtttctgtatacgcccatcttcatgt-cttgctcgggctga 1168

                                        
Query: 234  aaacaccttattcatgtctggcgaatcg 261
            |||||| |||||| |||||||| |||||
Sbjct: 1167 aaacacattattcgtgtctggcaaatcg 1140
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 51/52 (98%)
 Strand = Plus / Minus

                                                                    
Query: 331      cgcacatgttcttgcccatttccatcttgaagtaaccattgtnaccccagtc 382
                |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 16388448 cgcacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtc 16388397



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 174      tattcacagcaaagtttcagttcctgtataccc 206
                ||||||||  |||||||||||| ||||||||||
Sbjct: 16388702 tattcacaagaaagtttcagtttctgtataccc 16388670
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>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0046G12
          Length = 189391

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 51/52 (98%)
 Strand = Plus / Minus

                                                                 
Query: 331   cgcacatgttcttgcccatttccatcttgaagtaaccattgtnaccccagtc 382
             |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 76995 cgcacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtc 76944



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 174   tattcacagcaaagtttcagttcctgtataccc 206
             ||||||||  |||||||||||| ||||||||||
Sbjct: 77249 tattcacaagaaagtttcagtttctgtataccc 77217
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>gb|AY106223.1| Zea mays PCO114759 mRNA sequence
          Length = 1532

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                        
Query: 305  agggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatcttgaagta 364
            ||||||||| || || ||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 1155 agggtaggatgcacacgtagcaacaccgcacatgttcttgcccatttccatcttgaagta 1096

                              
Query: 365  accattgtnaccccagtc 382
            |||||  | |||||||||
Sbjct: 1095 accatcatcaccccagtc 1078
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>emb|X99936.1|ZMSEE1 Z.mays mRNA for cysteine proteinase, See1
          Length = 1412

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                        
Query: 305  agggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatcttgaagta 364
            ||||||||| || || ||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 1133 agggtaggatgcacacgtagcaacaccgcacatgttcttgcccatttccatcttgaagta 1074

               
Query: 365  acc 367
            |||
Sbjct: 1073 acc 1071
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>dbj|D45403.1|MZECYPA Corn mRNA for cysteine proteinase, clone CCP2, complete cds
          Length = 1382

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                        
Query: 305  agggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatcttgaagta 364
            ||||||||| || || ||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 1122 agggtaggatgcacacgtagcaacaccgcacatgttcttgcccatttccatcttgaagta 1063

               
Query: 365  acc 367
            |||
Sbjct: 1062 acc 1060
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>emb|Y11003.1|NTPPCYSPT N.tabacum mRNA for putative pre-pro-cysteine proteinase, partial
          Length = 535

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                       
Query: 300 acgacagggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatcttg 359
           |||||||||||||| ||||| || |||||| | ||||||||||| ||||| |||||||||
Sbjct: 314 acgacagggtaggatgcgcaagtggcaataccacacatgttctttcccatctccatcttg 255

                               
Query: 360 aagtaaccattgtnacccca 379
           ||||| |||| || ||||||
Sbjct: 254 aagtatccatcgtcacccca 235
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>gb|DQ084022.1| Nicotiana benthamiana cysteine proteinase aleuran type mRNA, complete
            cds
          Length = 1326

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                        
Query: 300  acgacagggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatcttg 359
            |||||||||||||| ||||| || |||||| | ||||||||||| ||||| ||||| |||
Sbjct: 1112 acgacagggtaggatgcgcaagtggcaataccacacatgttctttcccatctccattttg 1053

                                
Query: 360  aagtaaccattgtnacccca 379
            ||||| ||||||| ||||||
Sbjct: 1052 aagtatccattgtcacccca 1033
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>dbj|AB032168.1| Nicotiana tabacum NTCP-23 mRNA for cysteine protease, complete cds
          Length = 1340

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                        
Query: 300  acgacagggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatcttg 359
            |||||||||||||| ||||| || |||||| | ||||||||||| ||||| ||||| |||
Sbjct: 1110 acgacagggtaggatgcgcaagtggcaataccacacatgttctttcccatctccattttg 1051

                                
Query: 360  aagtaaccattgtnacccca 379
            ||||| ||||||| ||||||
Sbjct: 1050 aagtatccattgtcacccca 1031
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>gb|AY017412.1| Nicotiana tabacum NTCP23-like cysteine proteinase gene, complete cds
          Length = 2966

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                        
Query: 300  acgacagggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatcttg 359
            |||||||||||||| ||||| || |||||| | ||||||||||| ||||| ||||| |||
Sbjct: 2917 acgacagggtaggatgcgcaagtggcaataccacacatgttctttcccatctccattttg 2858

                                
Query: 360  aagtaaccattgtnacccca 379
            ||||| ||||||| ||||||
Sbjct: 2857 aagtatccattgtcacccca 2838
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>ref|NM_125429.2| Arabidopsis thaliana AALP; cysteine-type endopeptidase/ cysteine-type
            peptidase AT5G60360 (AALP) transcript variant AT5G60360.1
            mRNA, complete cds
          Length = 1468

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                        
Query: 297  gccacgacagggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatc 356
            ||||| || ||||| || || || ||||||||| | ||||||||||| ||||| ||||||
Sbjct: 1220 gccacaacggggtatgatgcacatgtagcaataccacacatgttcttccccatctccatc 1161

                            
Query: 357  ttgaagtaaccattgt 372
            ||||||||||| ||||
Sbjct: 1160 ttgaagtaacctttgt 1145
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>gb|AF083703.1| Arabidopsis thaliana clone sps232 unknown mRNA
          Length = 1355

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                        
Query: 297  gccacgacagggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatc 356
            ||||| || ||||| || || || ||||||||| | ||||||||||| ||||| ||||||
Sbjct: 1138 gccacaacggggtatgatgcacatgtagcaataccacacatgttcttccccatctccatc 1079

                            
Query: 357  ttgaagtaaccattgt 372
            ||||||||||| ||||
Sbjct: 1078 ttgaagtaacctttgt 1063
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>gb|BT000676.1| Arabidopsis thaliana clone RAFL08-12-G17 (R11172) putative cysteine
            proteinase AALP (At5g60360) mRNA, complete cds
          Length = 1331

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                        
Query: 297  gccacgacagggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatc 356
            ||||| || ||||| || || || ||||||||| | ||||||||||| ||||| ||||||
Sbjct: 1141 gccacaacggggtatgatgcacatgtagcaataccacacatgttcttccccatctccatc 1082

                            
Query: 357  ttgaagtaaccattgt 372
            ||||||||||| ||||
Sbjct: 1081 ttgaagtaacctttgt 1066
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>gb|BT000674.1| Arabidopsis thaliana clone RAFL05-19-H13 (R10283) putative cysteine
            proteinase AALP (At5g60360) mRNA, complete cds
          Length = 1366

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                        
Query: 297  gccacgacagggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatc 356
            ||||| || ||||| || || || ||||||||| | ||||||||||| ||||| ||||||
Sbjct: 1138 gccacaacggggtatgatgcacatgtagcaataccacacatgttcttccccatctccatc 1079

                            
Query: 357  ttgaagtaaccattgt 372
            ||||||||||| ||||
Sbjct: 1078 ttgaagtaacctttgt 1063
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>gb|BT000673.1| Arabidopsis thaliana clone RAFL07-10-L02 (R10707) putative cysteine
            proteinase AALP (At5g60360) mRNA, complete cds
          Length = 1409

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                        
Query: 297  gccacgacagggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatc 356
            ||||| || ||||| || || || ||||||||| | ||||||||||| ||||| ||||||
Sbjct: 1145 gccacaacggggtatgacgcacatgtagcaataccacacatgttcttccccatctccatc 1086

                            
Query: 357  ttgaagtaaccattgt 372
            ||||||||||| ||||
Sbjct: 1085 ttgaagtaacctttgt 1070
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>gb|AF360273.1| Arabidopsis thaliana putative cysteine proteinase AALP (At5g60360)
            mRNA, complete cds
          Length = 1370

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                        
Query: 297  gccacgacagggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatc 356
            ||||| || ||||| || || || ||||||||| | ||||||||||| ||||| ||||||
Sbjct: 1112 gccacaacggggtatgatgcacatgtagcaataccacacatgttcttccccatctccatc 1053

                            
Query: 357  ttgaagtaaccattgt 372
            ||||||||||| ||||
Sbjct: 1052 ttgaagtaacctttgt 1037
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>gb|AF454960.1|AF454960 Brassica oleracea senescence-associated cysteine protease (CP5) mRNA,
            complete cds
          Length = 1332

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 324  gcaatagcgcacatgttcttgcccatttccatcttgaagtaaccattgtnacccca 379
            |||||| | ||||||||||| ||||| ||||||||||||||||| |||| ||||||
Sbjct: 1080 gcaataccacacatgttcttccccatctccatcttgaagtaacctttgtcacccca 1025
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>emb|BX829791.1|CNS0A01S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB37ZD08 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1282

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                        
Query: 297  gccacgacagggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatc 356
            ||||| || ||||| || || || ||||||||| | ||||||||||| ||||| ||||||
Sbjct: 1145 gccacaacggggtatgatgcacatgtagcaataccacacatgttcttccccatctccatc 1086

                            
Query: 357  ttgaagtaaccattgt 372
            ||||||||||| ||||
Sbjct: 1085 ttgaagtaacctttgt 1070
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>gb|AY088662.1| Arabidopsis thaliana clone 8989 mRNA, complete sequence
          Length = 1352

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                        
Query: 297  gccacgacagggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatc 356
            ||||| || ||||| || || || ||||||||| | ||||||||||| ||||| ||||||
Sbjct: 1152 gccacaacggggtatgatgcacatgtagcaataccacacatgttcttccccatctccatc 1093

                            
Query: 357  ttgaagtaaccattgt 372
            ||||||||||| ||||
Sbjct: 1092 ttgaagtaacctttgt 1077
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>gb|AF233883.1|AF233883 Arabidopsis thaliana AALP protein mRNA, complete cds
          Length = 1305

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                        
Query: 297  gccacgacagggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatc 356
            ||||| || ||||| || || || ||||||||| | ||||||||||| ||||| ||||||
Sbjct: 1082 gccacaacggggtatgatgcacatgtagcaataccacacatgttcttccccatctccatc 1023

                            
Query: 357  ttgaagtaaccattgt 372
            ||||||||||| ||||
Sbjct: 1022 ttgaagtaacctttgt 1007
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>ref|NM_114400.2| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type
            peptidase AT3G45310 transcript variant AT3G45310.1 mRNA,
            complete cds
          Length = 1418

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 333  cacatgttcttgcccatttccatcttgaagtaaccattgt 372
            ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 1058 cacatgttctttcccatttccatcttgaagtagccattgt 1019
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>ref|NM_001035735.1| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type
            peptidase AT3G45310 transcript variant AT3G45310.2 mRNA,
            complete cds
          Length = 1442

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 333  cacatgttcttgcccatttccatcttgaagtaaccattgt 372
            ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 1085 cacatgttctttcccatttccatcttgaagtagccattgt 1046
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>gb|DQ209288.1| Brassica napus cysteine protease mRNA, complete cds
          Length = 1223

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 333  cacatgttcttgcccatttccatcttgaagtaaccattgtnacccca 379
            ||||||||||| ||||| ||||||||||||||||| |||| ||||||
Sbjct: 1040 cacatgttcttccccatctccatcttgaagtaacctttgtcacccca 994
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>emb|AL132953.2|ATF18N11 Arabidopsis thaliana DNA chromosome 3, BAC clone F18N11
          Length = 91274

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                     
Query: 333   cacatgttcttgcccatttccatcttgaagtaaccattgt 372
             ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 59521 cacatgttctttcccatttccatcttgaagtagccattgt 59560
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>emb|AJ844005.1| Plantago major partial mRNA for cysteine protease 1 (cpr1 gene)
          Length = 806

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                              
Query: 333 cacatgttcttgcccatttccatcttgaagtaaccattgtnaccccagtcg 383
           ||||||||||||||||| ||||| |||||||| |||||||  |||||||||
Sbjct: 412 cacatgttcttgcccatctccattttgaagtagccattgtctccccagtcg 362
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>gb|AY091771.1| Arabidopsis thaliana AT3g45310/F18N11_70 mRNA, complete cds
          Length = 1402

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 333  cacatgttcttgcccatttccatcttgaagtaaccattgt 372
            ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 1056 cacatgttctttcccatttccatcttgaagtagccattgt 1017
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>gb|AY496105.1| Capsicum annuum alternative oxidase 1a precursor (cyp-3) mRNA,
           complete cds
          Length = 479

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                       
Query: 300 acgacagggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatcttg 359
           |||||||||||||| ||||| || |||| | | ||||||||||| ||||| ||||| |||
Sbjct: 306 acgacagggtaggatgcgcaagttgcaacaccacacatgttcttccccatctccattttg 247

                
Query: 360 aagta 364
           |||||
Sbjct: 246 aagta 242
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>gb|AY383240.1| Glycine max cysteine proteinase mRNA, partial cds
          Length = 937

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 333 cacatgttcttgcccatttccatcttgaagtaaccattgtnaccccag 380
           ||||||||||| |||| ||||||||||||||| ||||| | |||||||
Sbjct: 554 cacatgttcttccccaattccatcttgaagtagccattttcaccccag 507
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>ref|NM_001037029.1| Arabidopsis thaliana AALP; cysteine-type endopeptidase/ cysteine-type
            peptidase AT5G60360 (AALP) transcript variant AT5G60360.2
            mRNA, complete cds
          Length = 1466

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 333  cacatgttcttgcccatttccatcttgaagtaaccattgt 372
            ||||||||||| ||||| ||||||||||||||||| ||||
Sbjct: 1184 cacatgttcttccccatctccatcttgaagtaacctttgt 1145
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>dbj|AB011483.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUF9
          Length = 77298

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 333  cacatgttcttgcccatttccatcttgaagtaaccattgt 372
            ||||||||||| ||||| ||||||||||||||||| ||||
Sbjct: 2517 cacatgttcttccccatctccatcttgaagtaacctttgt 2478
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>gb|AY111351.1| Zea mays CL1876_2 mRNA sequence
          Length = 532

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 303 acagggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatcttgaag 362
           ||||||||||| || || ||||||| | ||||||||     |||||||||||| ||||||
Sbjct: 236 acagggtaggatgcacacgtagcaacaccgcacatgnnnnngcccatttccattttgaag 177

                
Query: 363 taacc 367
           |||||
Sbjct: 176 taacc 172
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>emb|X93220.2|CACG2 Cicer arietinum partial mRNA for cysteine proteinase (cacG2 gene)
          Length = 1484

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 332  gcacatgttcttgcccatttccatcttgaagtaaccattgtnaccc 377
            |||||| ||||| |||||||||||||||||||| |||| || ||||
Sbjct: 1035 gcacatattcttccccatttccatcttgaagtagccatggtcaccc 990
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>gb|DQ492683.1| Medicago sativa cysteine protease (CP1) mRNA, complete cds
          Length = 1346

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 331  cgcacatgttcttgcccatttccatcttgaagtaaccattgtnacccca 379
            ||||||| ||||| ||||||||||| |||||||| |||| || ||||||
Sbjct: 1061 cgcacatattcttccccatttccattttgaagtagccatggtcacccca 1013
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>gb|U31094.1|PHU31094 Petunia hybrida thiol protease homolog P21 (PeTh3) mRNA, complete cds
          Length = 1347

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 66/80 (82%)
 Strand = Plus / Minus

                                                                        
Query: 300  acgacagggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatcttg 359
            |||||||||||||| ||||| || |||||| | |||||||  || ||||| ||||| |||
Sbjct: 1085 acgacagggtaggatgcgcaagttgcaataccacacatgtcgttacccatctccattttg 1026

                                
Query: 360  aagtaaccattgtnacccca 379
            || ||  |||||| ||||||
Sbjct: 1025 aaatatgcattgtcacccca 1006
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>emb|Z68291.1|PSRNACP P.sativum mRNA for cysteine protease
          Length = 1381

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                        
Query: 297  gccacgacagggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatc 356
            ||||| ||||| ||||| |  || ||||||| | ||||||| ||||| ||||||||||| 
Sbjct: 1080 gccacaacaggataggaagaacatgtagcaacaccgcacatattcttccccatttccatt 1021

                                   
Query: 357  ttgaagtaaccattgtnacccca 379
            ||||| || |||| || ||||||
Sbjct: 1020 ttgaaatagccatggtcacccca 998
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>emb|AJ278699.1|PSA278699 Pisum sativum mRNA for protease (elsa gene)
          Length = 1361

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                        
Query: 297  gccacgacagggtaggaggcgcangtagcaatagcgcacatgttcttgcccatttccatc 356
            ||||| ||||| ||||| |  || ||||||| | ||||||| ||||| ||||||||||| 
Sbjct: 1076 gccacaacaggataggaagaacatgtagcaacaccgcacatattcttccccatttccatt 1017

                                   
Query: 357  ttgaagtaaccattgtnacccca 379
            ||||| || |||| || ||||||
Sbjct: 1016 ttgaaatagccatggtcacccca 994
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>gb|U93166.1|PAU93166 Prunus armeniaca cysteine protease mRNA, complete cds
          Length = 1444

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 331  cgcacatgttcttgcccatttccatcttgaagtaaccattgtnaccccag 380
            ||||||||||||| || |  |||||||| ||||| ||||||| |||||||
Sbjct: 1120 cgcacatgttcttcccaaactccatcttaaagtagccattgtcaccccag 1071
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>gb|DQ212052.1| Anopheles quadriannulatus isolate qdch64a defensin (Def) gene,
           complete cds
          Length = 1369

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 119 tacagaggaagagtacacgcacggg 143
           ||||||| |||||||||||||||||
Sbjct: 81  tacagagtaagagtacacgcacggg 105
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>dbj|AP001528.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-736K20, complete
             sequence
          Length = 155523

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 90    gatcacctacatatatagccataca 114
             |||||||||||||||||| ||||||
Sbjct: 20157 gatcacctacatatatagtcataca 20181
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>emb|CR478208.13| Zebrafish DNA sequence from clone CH211-149M3 in linkage group 16,
              complete sequence
          Length = 195111

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 347    catttccatcttgaagtaac 366
              ||||||||||||||||||||
Sbjct: 120730 catttccatcttgaagtaac 120749
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    tgcccatttccatcttgaag 362
              ||||||||||||||||||||
Sbjct: 667127 tgcccatttccatcttgaag 667108
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>emb|X75749.1|VSCYSPRO V.sativa L. mRNA for cysteine protease
          Length = 1361

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                           
Query: 351  tccatcttgaagtaaccattgtnaccccagt 381
            |||||||||||||||||||  | ||||||||
Sbjct: 1020 tccatcttgaagtaaccatcttcaccccagt 990
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>emb|CR394547.7| Zebrafish DNA sequence from clone CH211-127P22 in linkage group 16,
             complete sequence
          Length = 151129

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 347   catttccatcttgaagtaac 366
             ||||||||||||||||||||
Sbjct: 80994 catttccatcttgaagtaac 81013
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>gb|AC007070.5| Arabidopsis thaliana chromosome 2 clone T22F11 map GPA1, complete
             sequence
          Length = 86017

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    cgtagacatacatgagaaac 74
             ||||||||||||||||||||
Sbjct: 45457 cgtagacatacatgagaaac 45438
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>gb|AC110081.3| Homo sapiens BAC clone RP11-453M2 from 4, complete sequence
          Length = 44837

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 98    acatatatagccatacaaccatacagag 125
             |||||||||||||||||  |||||||||
Sbjct: 21299 acatatatagccatacacacatacagag 21326
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>gb|AC092624.2| Homo sapiens BAC clone RP11-261J9 from 2, complete sequence
          Length = 101158

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    ctggatcacctacatatata 106
             ||||||||||||||||||||
Sbjct: 16505 ctggatcacctacatatata 16486
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>gb|AC115289.6| Mus musculus BAC clone RP23-57G16 from 13, complete sequence
          Length = 210109

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 177    tcacagcaaagtttcagttc 196
              ||||||||||||||||||||
Sbjct: 175450 tcacagcaaagtttcagttc 175469


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,092,047
Number of Sequences: 3902068
Number of extensions: 3092047
Number of successful extensions: 49020
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48929
Number of HSP's gapped (non-prelim): 90
length of query: 383
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 361
effective length of database: 17,147,199,772
effective search space: 6190139117692
effective search space used: 6190139117692
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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