| Clone Name | rbaal15m09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC117547.19| Mus musculus chromosome 1, clone RP23-221M20, complete sequence Length = 195598 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 617 tccactggtttcttggctggtgtgg 641 |||||||| |||||||||||||||| Sbjct: 2577 tccactggcttcttggctggtgtgg 2553
>gb|DQ191684.1| Squilla empusa mitochondrion, complete genome Length = 15828 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 aaatgacaattcatacaagaa 83 ||||||||||||||||||||| Sbjct: 15514 aaatgacaattcatacaagaa 15534
>emb|CR626941.10| Zebrafish DNA sequence from clone DKEY-12J5 in linkage group 16, complete sequence Length = 238554 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 agtttacaaatgacaattcat 76 ||||||||||||||||||||| Sbjct: 3119 agtttacaaatgacaattcat 3099
>gb|AC164373.4| Mus musculus chromosome 1, clone RP23-36O22, complete sequence Length = 171278 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 617 tccactggtttcttggctggtgtgg 641 |||||||| |||||||||||||||| Sbjct: 114236 tccactggcttcttggctggtgtgg 114212
>gb|AC146526.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0027D12 map near 50283S, complete sequence Length = 128988 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 616 ctccactggtttcttggctggtgt 639 |||| ||||||||||||||||||| Sbjct: 96562 ctcctctggtttcttggctggtgt 96585
>gb|AC146946.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0037B06 map near 50283S, complete sequence Length = 149398 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 616 ctccactggtttcttggctggtgt 639 |||| ||||||||||||||||||| Sbjct: 137567 ctcctctggtttcttggctggtgt 137544
>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04, complete sequence Length = 88553 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 586 tttctcatctcgtgcttcaaccgt 609 ||||||||||||||||||| |||| Sbjct: 35956 tttctcatctcgtgcttcagccgt 35933
>ref|XM_616959.2| PREDICTED: Bos taurus similar to roundabout 1 isoform b (LOC536815), partial mRNA Length = 4566 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 624 gtttcttggctggtgtggccttct 647 |||||||||||||| ||||||||| Sbjct: 3471 gtttcttggctggtctggccttct 3448
>gb|AC140332.3| Mus musculus BAC clone RP23-408K9 from chromosome 19, complete sequence Length = 206515 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 gtgagctagctagcctttct 465 |||||||||||||||||||| Sbjct: 126166 gtgagctagctagcctttct 126185
>gb|AC126454.3| Mus musculus BAC clone RP23-256L12 from 19, complete sequence Length = 188518 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 gtgagctagctagcctttct 465 |||||||||||||||||||| Sbjct: 174295 gtgagctagctagcctttct 174276
>emb|AL133548.6| Human DNA sequence from clone RP11-235O14 on chromosome 9q13-21.2 Contains a novel gene (FLJ20559), the OSTF1 gene for osteoclast stimulating factor 1 (OSF, SH3P2) and a CpG island, complete sequence Length = 153392 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 atggggccaaatatatgtta 303 |||||||||||||||||||| Sbjct: 65093 atggggccaaatatatgtta 65074
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 616 ctccactggtttcttggctggtgt 639 |||| ||||||||||||||||||| Sbjct: 14597149 ctcctctggtttcttggctggtgt 14597172
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 586 tttctcatctcgtgcttcaaccgt 609 ||||||||||||||||||| |||| Sbjct: 22623418 tttctcatctcgtgcttcagccgt 22623395
>dbj|AK105760.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D06, full insert sequence Length = 1994 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 586 tttctcatctcgtgcttcaaccgt 609 ||||||||||||||||||| |||| Sbjct: 1293 tttctcatctcgtgcttcagccgt 1270
>dbj|AK099541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013032J01, full insert sequence Length = 1752 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 586 tttctcatctcgtgcttcaaccgt 609 ||||||||||||||||||| |||| Sbjct: 1082 tttctcatctcgtgcttcagccgt 1059
>gb|AC003694.1|AC003694 Mus musculus chromosome 19, clone CIT282B21, complete sequence Length = 186314 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 gtgagctagctagcctttct 465 |||||||||||||||||||| Sbjct: 164090 gtgagctagctagcctttct 164109
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 616 ctccactggtttcttggctggtgt 639 |||| ||||||||||||||||||| Sbjct: 14679150 ctcctctggtttcttggctggtgt 14679173 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,170,579 Number of Sequences: 3902068 Number of extensions: 5170579 Number of successful extensions: 89598 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89478 Number of HSP's gapped (non-prelim): 120 length of query: 700 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 677 effective length of database: 17,143,297,704 effective search space: 11606012545608 effective search space used: 11606012545608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)