| Clone Name | rbaal16b07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | DB130_PANTR (Q30KJ9) Beta-defensin 130 precursor (Defensin, beta... | 30 | 5.4 | 2 | DB130_HUMAN (Q30KQ2) Beta-defensin 130 precursor (Defensin, beta... | 30 | 5.4 | 3 | FAB1_YEAST (P34756) 1-phosphatidylinositol-3-phosphate 5-kinase ... | 29 | 9.2 |
|---|
>DB130_PANTR (Q30KJ9) Beta-defensin 130 precursor (Defensin, beta 130)| Length = 79 Score = 30.0 bits (66), Expect = 5.4 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = -3 Query: 581 CNRVRSCCRRWWL 543 CN + CCRRWW+ Sbjct: 53 CNEGKKCCRRWWI 65
>DB130_HUMAN (Q30KQ2) Beta-defensin 130 precursor (Defensin, beta 130)| (Beta-defensin 30) (DEFB-30) Length = 79 Score = 30.0 bits (66), Expect = 5.4 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = -3 Query: 581 CNRVRSCCRRWWL 543 CN + CCRRWW+ Sbjct: 53 CNEGKKCCRRWWI 65
>FAB1_YEAST (P34756) 1-phosphatidylinositol-3-phosphate 5-kinase FAB1 (EC| 2.7.1.150) (Phosphatidylinositol-3-phosphate 5-kinase) (Type III PIP kinase) Length = 2278 Score = 29.3 bits (64), Expect = 9.2 Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Frame = +2 Query: 257 DRLTYQYLSFLT*KPLSFVSVSRISFATSNSHVS-SETHRHALSSANSGPMVKEKN 421 D +T LS ++ +S + S I+ ATS SHV+ + +H + ++AN+ V +KN Sbjct: 59 DLVTNPILSNISVPKISPPTSSSIATATSTSHVTGTASHSNIKANANTSTSVNKKN 114 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,095,868 Number of Sequences: 219361 Number of extensions: 1785445 Number of successful extensions: 4150 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 4032 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4150 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)