>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score =  343 bits (173), Expect = 4e-91
 Identities = 230/250 (92%)
 Strand = Plus / Minus

                                                                          
Query: 1      ccgaatttaaaataccgaacaaagttagaacattacaaatctcgaggacgcgagtaacaa 60
              |||||||||||||||||||||||||||||||||||||| ||||||   |||||||| | |
Sbjct: 323453 ccgaatttaaaataccgaacaaagttagaacattacaagtctcgaaaccgcgagtagcga 323394

                                                                          
Query: 61     gtttgncttcacattacaagncgatatcgatcatctaaactaccatcacatagaagagag 120
              ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 323393 gtttgtcttcacattacaagtcgatatcgatcatctaaactaccatcacatagaagagag 323334

                                                                          
Query: 121    ctgcggtcatcacgatgagcataatcgcgatgaaactggtcttcatccggttcctccaac 180
                |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||  |
Sbjct: 323333 tcgcggtcatcacgatgagcatcatcgcgatgaaactggtcttcatccagtttctcctcc 323274

                                                                          
Query: 181    actccctcctctctcccgctagatagcgcgcgtatataacttncgcatccgcccttgtgg 240
               |||||||||||||||||||||||||||||||||| |||||| ||| |||||||| ||||
Sbjct: 323273 gctccctcctctctcccgctagatagcgcgcgtatctaacttccgcctccgccctagtgg 323214

                        
Query: 241    tgtacccttt 250
              ||||||||||
Sbjct: 323213 tgtacccttt 323204

>gb|U76261.1|HVU76261 Hordeum vulgare highly repeated, retrotransposon-like sequence
          Length = 5050

 Score =  331 bits (167), Expect = 2e-87
 Identities = 195/205 (95%)
 Strand = Plus / Minus

                                                                        
Query: 217  taacttncgcatccgcccttgtggtgtaccctttatactctgtccatcanaaagcttttg 276
            |||||| ||| ||| ||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 1923 taacttccgcctcctcccttgtggtgtaccctttgtactctgtccatcagaaagcttttg 1864

                                                                        
Query: 277  actcacagagttatcatcactacttgtctgttgcaaatcttccttgccttctacctcagg 336
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1863 actcacagaattatcatcactacttgtctgttgcaaatcttccttgccttctacctcagg 1804

                                                                        
Query: 337  ttgtgtaaagaccatgctacttgcaacagcagcactatcctcaacaggaactgccctgtt 396
            |||||||| ||||||||||||||||||| || |||||||||||||||||||||| |||||
Sbjct: 1803 ttgtgtaaggaccatgctacttgcaacaacaacactatcctcaacaggaactgcactgtt 1744

                                     
Query: 397  cctcaacaggccattctgtccatca 421
            |||||||||||||||||||||||||
Sbjct: 1743 cctcaacaggccattctgtccatca 1719



 Score =  165 bits (83), Expect = 2e-37
 Identities = 102/109 (93%)
 Strand = Plus / Minus

                                                                        
Query: 3    gaatttaaaataccgaacaaagttagaacattacaaatctcgaggacgcgagtaacaagt 62
            |||||||||||||||||||||||||||||||||||| |||||||  |||||||| | |||
Sbjct: 2046 gaatttaaaataccgaacaaagttagaacattacaagtctcgagaccgcgagtagcgagt 1987

                                                             
Query: 63   ttgncttcacattacaagncgatatcgatcatctaaactaccatcacat 111
            ||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1986 ttgtcttcacattacaagtcgatatcgatcatctaaactaccatcacat 1938



 Score =  129 bits (65), Expect = 1e-26
 Identities = 96/107 (89%)
 Strand = Plus / Minus

                                                                        
Query: 411  tctgtccatcaggaatcttttaactcacagcaatatcatcactacgtgtctgntgcaaat 470
            |||||||||||| || ||||| |||||||| | |||||||||||| |||||| |||||||
Sbjct: 1885 tctgtccatcagaaagcttttgactcacagaattatcatcactacttgtctgttgcaaat 1826

                                                           
Query: 471  cttccttgccttntacctcgggttgtgtaaggaccgtgttacttgca 517
            |||||||||||| |||||| ||||||||||||||| || ||||||||
Sbjct: 1825 cttccttgccttctacctcaggttgtgtaaggaccatgctacttgca 1779

>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence
          Length = 190469

 Score =  226 bits (114), Expect = 6e-56
 Identities = 145/156 (92%)
 Strand = Plus / Plus

                                                                          
Query: 60     agtttgncttcacattacaagncgatatcgatcatctaaactaccatcacatagaagaga 119
              |||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 101139 agtttgtcttcacattacaagtcgatatcgatcatctaaactatcatcacatagaagaga 101198

                                                                          
Query: 120    gctgcggtcatcacgatgagcataatcgcgatgaaactggtcttcatccggttcctccaa 179
              ||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||
Sbjct: 101199 gctgcggtcatcacgatgagcatcatcacgatgaaactcgtcttcatccggttcctccaa 101258

                                                  
Query: 180    cactccctcctctctcccgctagatagcgcgcgtat 215
                |||||||| |||||||||||||||| | ||||||
Sbjct: 101259 tgctccctcccctctcccgctagatagtgggcgtat 101294



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 1      ccgaatttaaaataccgaacaaagttagaacatta 35
              ||||||| |||| ||||||||||| ||||||||||
Sbjct: 101082 ccgaattgaaaagaccgaacaaagatagaacatta 101116

>gb|AY089999.1| Lolium perenne CACTA-family transposon sequence
          Length = 12483

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                               
Query: 87    tcgatcatctaaactaccatcacatagaagagag 120
             |||||||||| |||||||||||||||||||||||
Sbjct: 11780 tcgatcatctgaactaccatcacatagaagagag 11747



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 83/103 (80%)
 Strand = Plus / Minus

                                                                         
Query: 148   cgatgaaactggtcttcatccggttcctccaacactccctcctctctcccgctagatagc 207
             |||||||| ||||||||||| |||||||||  | |||| |||||||| |||| | || ||
Sbjct: 11722 cgatgaaagtggtcttcatctggttcctcctccgctccgtcctctctaccgccacatggc 11663

                                                        
Query: 208   gcgcgtatataacttncgcatccgcccttgtggtgtacccttt 250
             | |||||| |  |||  |  ||||| || ||||||||||||||
Sbjct: 11662 gtgcgtatctgtcttcggtctccgctctagtggtgtacccttt 11620

>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and
             LRK19 (Lrk19) genes, complete cds
          Length = 35872

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                      
Query: 9     aaaataccgaacaaagttagaacattacaaatctcgaggacgcgagtaacaagtttg 65
             |||| ||||||||||| ||||||||||||| |||||||  |||||||| | ||||||
Sbjct: 15776 aaaagaccgaacaaagatagaacattacaagtctcgagaccgcgagtagcgagtttg 15720

>ref|XM_960737.1| Neurospora crassa OR74A hypothetical protein (NCU00690.1) partial
            mRNA
          Length = 2793

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 391  cctgttcctcaacaggccatt 411
            |||||||||||||||||||||
Sbjct: 1462 cctgttcctcaacaggccatt 1442

>ref|XM_324869.1| Neurospora crassa OR74A hypothetical protein (NCU00690.1) partial
            mRNA
          Length = 2793

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 391  cctgttcctcaacaggccatt 411
            |||||||||||||||||||||
Sbjct: 1462 cctgttcctcaacaggccatt 1442

>gb|AC128700.4| Mus musculus BAC clone RP24-130A20 from chromosome 8, complete sequence
          Length = 161757

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 180   cactccctcctctctcccgct 200
             |||||||||||||||||||||
Sbjct: 65023 cactccctcctctctcccgct 65003

>gb|AC130841.4| Mus musculus BAC clone RP24-445L16 from chromosome 8, complete sequence
          Length = 174384

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 180    cactccctcctctctcccgct 200
              |||||||||||||||||||||
Sbjct: 161615 cactccctcctctctcccgct 161595

>gb|AC154379.2| Mus musculus BAC clone RP23-52B1 from chromosome 17, complete sequence
          Length = 234939

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 299    cttgtctgttgcaaatcttcc 319
              |||||||||||||||||||||
Sbjct: 195863 cttgtctgttgcaaatcttcc 195843

>gb|AC166351.1| Mus musculus BAC clone RP24-224C7 from chromosome 17, complete sequence
          Length = 162550

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 299   cttgtctgttgcaaatcttcc 319
             |||||||||||||||||||||
Sbjct: 16072 cttgtctgttgcaaatcttcc 16052

>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 404     aggccattctgtccatcagga 424
               |||||||||||||||||||||
Sbjct: 3944741 aggccattctgtccatcagga 3944761

>emb|AL773540.18| Mouse DNA sequence from clone RP23-177L19 on chromosome 2, complete
             sequence
          Length = 217148

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 173   cctccaacactccctcctctctccc 197
             |||||||||||||| ||||||||||
Sbjct: 37673 cctccaacactcccacctctctccc 37649

>gb|AC068140.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-246M15, complete
             sequence
          Length = 113092

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   aagcttttgactcacagagt 287
             ||||||||||||||||||||
Sbjct: 27693 aagcttttgactcacagagt 27712

>emb|AL034370.1|HSA218J18 Human DNA sequence from clone RP6-218J18 on chromosome Xp11.3-11.4
              Contains the NDP gene for norrie disease (pseudoglioma),  a
              RNA-binding region (RNP1, RRM) containing 2 (RNPC2)
              pseudogene, a novel gene and a CpG island, complete
              sequence
          Length = 119945

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 333    caggttgtgtaaagaccatg 352
              ||||||||||||||||||||
Sbjct: 103143 caggttgtgtaaagaccatg 103124

>gb|AC112770.4| Homo sapiens 3 BAC RP11-686L6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 187977

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    cttgtggtgtaccctttata 253
              ||||||||||||||||||||
Sbjct: 162157 cttgtggtgtaccctttata 162176

>emb|CR354383.8| Zebrafish DNA sequence from clone CH211-123O7 in linkage group 21,
             complete sequence
          Length = 168569

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   tctgttgcaaatcttccttg 322
             ||||||||||||||||||||
Sbjct: 11264 tctgttgcaaatcttccttg 11283

>emb|BX005459.6| Zebrafish DNA sequence from clone CH211-214N22 in linkage group 6,
              complete sequence
          Length = 211210

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 434    ctcacagcaatatcatcact 453
              ||||||||||||||||||||
Sbjct: 138372 ctcacagcaatatcatcact 138391

>emb|AL928625.5| Mouse DNA sequence from clone RP24-528P17 on chromosome 4, complete
              sequence
          Length = 170639

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    tggtgtaccctttatactct 257
              ||||||||||||||||||||
Sbjct: 136569 tggtgtaccctttatactct 136588

>emb|CR354613.7| Zebrafish DNA sequence from clone CH211-112G7 in linkage group 21,
             complete sequence
          Length = 179432

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   tctgttgcaaatcttccttg 322
             ||||||||||||||||||||
Sbjct: 47627 tctgttgcaaatcttccttg 47646

>gb|AC105746.10| Oryza sativa chromosome 10 BAC OSJNBb0086I08 genomic sequence, complete
              sequence
          Length = 126842

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    ctccctcctctctcccgcta 201
              ||||||||||||||||||||
Sbjct: 113873 ctccctcctctctcccgcta 113854

>ref|NM_141680.1| Drosophila melanogaster CG16908-RA (CG16908), mRNA
          Length = 3243

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 513 ttgcagcaccaccaccagga 532
           ||||||||||||||||||||
Sbjct: 297 ttgcagcaccaccaccagga 278

>gb|AC072057.8| Homo sapiens BAC clone RP11-312C1 from 7, complete sequence
          Length = 140150

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   aacactccctcctctctccc 197
             ||||||||||||||||||||
Sbjct: 28783 aacactccctcctctctccc 28802

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 182     ctccctcctctctcccgcta 201
               ||||||||||||||||||||
Sbjct: 5553649 ctccctcctctctcccgcta 5553668

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 174      ctccaacactccctcctctctccc 197
                ||||||| ||||||||||||||||
Sbjct: 19837751 ctccaacgctccctcctctctccc 19837774

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 174      ctccaacactccctcctctctccc 197
                ||||||| ||||||||||||||||
Sbjct: 22267437 ctccaacgctccctcctctctccc 22267460

>gb|AC008316.3|AC008316 Drosophila melanogaster, chromosome 3R, region 85F-85F, BAC clone
             BACR23O04, complete sequence
          Length = 160817

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 513   ttgcagcaccaccaccagga 532
             ||||||||||||||||||||
Sbjct: 28815 ttgcagcaccaccaccagga 28834

>gb|AC008315.9|AC008315 Drosophila melanogaster, chromosome 3R, region 85E-85E, BAC clone
              BACR30F01, complete sequence
          Length = 177028

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 513    ttgcagcaccaccaccagga 532
              ||||||||||||||||||||
Sbjct: 135968 ttgcagcaccaccaccagga 135987

>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1267B06
          Length = 156989

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 174   ctccaacactccctcctctctccc 197
             ||||||| ||||||||||||||||
Sbjct: 26081 ctccaacgctccctcctctctccc 26104

>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0433E10
          Length = 144643

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 174  ctccaacactccctcctctctccc 197
            ||||||| ||||||||||||||||
Sbjct: 5929 ctccaacgctccctcctctctccc 5952

>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0007M04
          Length = 176293

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 174    ctccaacactccctcctctctccc 197
              ||||||| ||||||||||||||||
Sbjct: 166702 ctccaacgctccctcctctctccc 166725

>gb|AE003684.4| Drosophila melanogaster chromosome 3R, section 22 of 118 of the
             complete sequence
          Length = 214323

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 513   ttgcagcaccaccaccagga 532
             ||||||||||||||||||||
Sbjct: 48538 ttgcagcaccaccaccagga 48557

>emb|AL355834.4|CNS05TCN Human chromosome 14 DNA sequence BAC R-932A10 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 222275

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    taaactaccatcacatagaa 115
             ||||||||||||||||||||
Sbjct: 36739 taaactaccatcacatagaa 36720

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 182     ctccctcctctctcccgcta 201
               ||||||||||||||||||||
Sbjct: 5554436 ctccctcctctctcccgcta 5554455

>emb|BX004791.6| Mouse DNA sequence from clone RP24-233L10 on chromosome 4, complete
             sequence
          Length = 123244

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 427   cttttaactcacagcaatat 446
             ||||||||||||||||||||
Sbjct: 78247 cttttaactcacagcaatat 78266

>gb|AC131655.4| Mus musculus BAC clone RP23-233G16 from 8, complete sequence
          Length = 190990

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    tgactcacagagttatcatc 294
              ||||||||||||||||||||
Sbjct: 151661 tgactcacagagttatcatc 151680

>emb|AL807745.7| Mouse DNA sequence from clone RP23-20E10 on chromosome 4, complete
             sequence
          Length = 218691

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 366   cagcactatcctcaacagga 385
             ||||||||||||||||||||
Sbjct: 45946 cagcactatcctcaacagga 45965


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,492,426
Number of Sequences: 3902068
Number of extensions: 4492426
Number of successful extensions: 79059
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78852
Number of HSP's gapped (non-prelim): 207
length of query: 591
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 568
effective length of database: 17,143,297,704
effective search space: 9737393095872
effective search space used: 9737393095872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)