ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal16b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009432.1| Triticum aestivum clone wlmk1.pk0037.b8:fis, full... 391 e-105
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
3dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
4dbj|AK111862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
5dbj|AK111494.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
6emb|AL031798.1|SPCC576 S.pombe chromosome III cosmid c576 44 0.53
7ref|NM_001023423.1| Schizosaccharomyces pombe 972h- hypothetical... 44 0.53
8gb|AY111072.1| Zea mays CL5330_1 mRNA sequence 44 0.53
9emb|AJ937769.1| Uncultured epsilon proteobacterium fosmid clone ... 44 0.53
10emb|AJ347812.1|SPY347812 Streptococcus pyogenes partial sfbI gen... 42 2.1
11emb|AJ347839.1|SPY347839 Streptococcus pyogenes sfbI gene for fi... 42 2.1
12emb|AJ347838.1|SPY347838 Streptococcus pyogenes sfbI gene for fi... 42 2.1
13emb|AJ347837.1|SPY347837 Streptococcus pyogenes sfbI gene for fi... 42 2.1
14emb|AJ347836.1|SPY347836 Streptococcus pyogenes sfbI gene for fi... 42 2.1
15emb|AJ347835.1|SPY347835 Streptococcus pyogenes sfbI gene for fi... 42 2.1
16emb|AJ347813.1|SPY347813 Streptococcus pyogenes partial sfbI gen... 42 2.1
17emb|AJ347811.1|SPY347811 Streptococcus pyogenes partial sfbI gen... 42 2.1
18emb|AJ347810.1|SPY347810 Streptococcus pyogenes partial sfbI gen... 42 2.1
19emb|AJ347809.1|SPY347809 Streptococcus pyogenes partial sfbI gen... 42 2.1
20emb|AJ347808.1|SPY347808 Streptococcus pyogenes partial sfbI gen... 42 2.1
21gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
22gb|AC118346.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
23gb|AC119420.12| Mus musculus strain 129S6/SvEvTac clone rp22-121... 42 2.1
24emb|AL604046.8| Mouse DNA sequence from clone RP23-206D6 on chro... 42 2.1
25emb|AL611937.6| Mouse DNA sequence from clone RP23-221M24 on chr... 42 2.1
26emb|BX511227.7| Zebrafish DNA sequence from clone DKEY-100E19 in... 42 2.1
27dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome 42 2.1
28dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
29dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
30dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
31dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
32dbj|AP005892.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
33gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
34gb|AE014828.1| Plasmodium falciparum 3D7 chromosome 14 section 1... 40 8.2
35gb|BT014615.1| Lycopersicon esculentum clone 134101F, mRNA sequence 40 8.2
36gb|AC167711.1| Medicago truncatula chromosome 7 BAC clone mth2-1... 40 8.2
37gb|AC122847.4| Mus musculus BAC clone RP23-163F2 from 6, complet... 40 8.2
38gb|AC142284.1| Pan troglodytes BAC clone RP43-163P11 from 7, com... 40 8.2
39emb|AL035251.11|HS705O1 Human DNA sequence from clone RP4-705O1 ... 40 8.2
40emb|AL138659.1|ATT16L24 Arabidopsis thaliana DNA chromosome 3, B... 40 8.2
41emb|AL671560.7| Mouse DNA sequence from clone RP23-149A5 on chro... 40 8.2
42gb|AC023385.10| Homo sapiens chromosome 8, clone RP11-675P19, co... 40 8.2
43gb|AC024109.18| Homo sapiens 3 BAC RP11-32F4 (Roswell Park Cance... 40 8.2
44gb|AC079200.6| Homo sapiens chromosome 8, clone RP11-1058B24, co... 40 8.2
45gb|AC007923.7| Homo sapiens chromosome 17, clone RP11-805L22, co... 40 8.2
46gb|AC080009.13| Homo sapiens 3q BAC RP11-460M17 (Roswell Park Ca... 40 8.2
47gb|AC004886.1| Homo sapiens PAC clone RP4-784G16 from 7, complet... 40 8.2
48gb|AY958432.1| Homo sapiens methionine sulfoxide reductase gene,... 40 8.2
49gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome... 40 8.2
50gb|AC006423.7|AC006423 Arabidopsis thaliana chromosome I BAC F28... 40 8.2
51gb|AC174768.1| Gasterosteus aculeatus clone VMRC28-49C14, comple... 40 8.2 
>gb|BT009432.1| Triticum aestivum clone wlmk1.pk0037.b8:fis, full insert mRNA
            sequence
          Length = 2324

 Score =  391 bits (197), Expect = e-105
 Identities = 234/245 (95%), Gaps = 1/245 (0%)
 Strand = Plus / Minus

                                                                        
Query: 362  gtgcgattagaatttgtgtttcacatttactaaagaatcagaaggaaatagtctgctatg 421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1901 gtgcgattagaatttgtgtttcacatttactaaagaatcagaaggaaatagtctgctatg 1842

                                                                        
Query: 422  cttggagttggaggatatccatcccctgggtgccaaccgcctcttccgacccccaatcac 481
            |||||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||||
Sbjct: 1841 cttggagttgaaggatatccatcccgtgggtgccaaccgcctctttcgacccc-aatcac 1783

                                                                        
Query: 482  agaattgatgacaatgttctgcaccatttctctggttgcatgtgcaaggccgaagctttc 541
             ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 1782 ggaattgacgacaatgtcctgcaccatttccctggttgcatgtgcaaggcccaagctttc 1723

                                                                        
Query: 542  acgttgcacaaaccaaaaacagtgaatcttctctagcacattccctatgcataatacatg 601
            || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1722 acattgaacaaaccaaaaacagtgaatcttctctagcacattccctatgcataatacatg 1663

                 
Query: 602  tacaa 606
            |||||
Sbjct: 1662 tacaa 1658



 Score =  357 bits (180), Expect = 3e-95
 Identities = 213/224 (95%), Gaps = 5/224 (2%)
 Strand = Plus / Minus

                                                                        
Query: 138  ctacaagtcataatttatgtccacagatgtttcaccgttggtgacagcagatggttaaac 197
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2144 ctacaagtcataatttatgtccacagatgtttcaccgttggtgacagcagatggttaacc 2085

                                                                        
Query: 198  ctggctaggcggcattacattacacttgatgaagagaaaagaaaatttcttacatccacc 257
            ||||||||||| |||||||||||| ||||     ||| ||| ||||||||||||||||||
Sbjct: 2084 ctggctaggcgacattacattacatttga-----agagaagcaaatttcttacatccacc 2030

                                                                        
Query: 258  gtaagcagatatttcctgggaccaagtgaaattagaatcagccttgctatcttctgctct 317
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2029 gtaagcagatatttcctgtgaccaagtgaaattagaatcagccttgctatcttctgctct 1970

                                                        
Query: 318  gtcctccaactgctggtgttttggctacacatgcagctacaatc 361
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1969 gtcctccaactgctggtgttttggctacacatgcagctacaatc 1926



 Score =  226 bits (114), Expect = 7e-56
 Identities = 120/122 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttagttgtgagttttgcatggcaaaatgtagcatatacaacttaggtcatagccgatcac 60
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2280 ttagttgtgagttttgcatggcaaaatgtagcatatacaacttaggtcacagccgatcac 2221

                                                                        
Query: 61   atgcagcaggagttgagtcacacctgcaaacttattgtaagtttcgaccaccaacaaata 120
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2220 atgcagcaggagttgagtcacacctgcaaacttattgtaagtttggaccaccaacaaata 2161

              
Query: 121  ga 122
            ||
Sbjct: 2160 ga 2159
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                           
Query: 483      gaattgatgacaatgttctgcaccatttctctggttgcatgtg 525
                ||||||| |||||  | ||||||||| ||||||||||||||||
Sbjct: 21314078 gaattgacgacaacatcctgcaccatatctctggttgcatgtg 21314036



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                       
Query: 552      aaccaaaaacagtgaatcttctctagcacattccctatgcataatacatgtacaa 606
                ||||||||||| | ||| ||||| ||||| ||| ||| ||||||||||| |||||
Sbjct: 21314012 aaccaaaaacaataaattttctcaagcaccttctctacgcataatacatatacaa 21313958



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 222      cttgatgaagagaaaagaaaa 242
                |||||||||||||||||||||
Sbjct: 23774265 cttgatgaagagaaaagaaaa 23774245
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>dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0656E03
          Length = 181786

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 483    gaattgatgacaatgttctgcaccatttctctggttgcatgtg 525
              ||||||| |||||  | ||||||||| ||||||||||||||||
Sbjct: 109454 gaattgacgacaacatcctgcaccatatctctggttgcatgtg 109412



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                     
Query: 552    aaccaaaaacagtgaatcttctctagcacattccctatgcataatacatgtacaa 606
              ||||||||||| | ||| ||||| ||||| ||| ||| ||||||||||| |||||
Sbjct: 109388 aaccaaaaacaataaattttctcaagcaccttctctacgcataatacatatacaa 109334
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>dbj|AK111862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024L19, full
           insert sequence
          Length = 961

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 483 gaattgatgacaatgttctgcaccatttctctggttgcatgtg 525
           ||||||| |||||  | ||||||||| ||||||||||||||||
Sbjct: 579 gaattgacgacaacatcctgcaccatatctctggttgcatgtg 537



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 552 aaccaaaaacagtgaatcttctctagcacattccctatgcataatacatgtacaa 606
           ||||||||||| | ||| ||||| ||||| ||| ||| ||||||||||| |||||
Sbjct: 513 aaccaaaaacaataaattttctcaagcaccttctctacgcataatacatatacaa 459
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>dbj|AK111494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D03, full
           insert sequence
          Length = 2264

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                  
Query: 552 aaccaaaaacagtgaatcttctctagcacattccctatgcataatacatgtacaa 606
           ||||||||||| | ||| ||||| ||||| ||| ||| ||||||||||| |||||
Sbjct: 434 aaccaaaaacaataaattttctcaagcaccttctctacgcataatacatatacaa 488



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 500 ctgcaccatttctctggttgcatgtg 525
           ||||||||| ||||||||||||||||
Sbjct: 385 ctgcaccatatctctggttgcatgtg 410
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>emb|AL031798.1|SPCC576 S.pombe chromosome III cosmid c576
          Length = 35566

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 221   acttgatgaagagaaaagaaaa 242
             ||||||||||||||||||||||
Sbjct: 11206 acttgatgaagagaaaagaaaa 11227
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>ref|NM_001023423.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC576.05),
            partial mRNA
          Length = 3075

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 221  acttgatgaagagaaaagaaaa 242
            ||||||||||||||||||||||
Sbjct: 2472 acttgatgaagagaaaagaaaa 2493
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>gb|AY111072.1| Zea mays CL5330_1 mRNA sequence
          Length = 796

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 492 acaatgttctgcaccatttctctggttgca 521
           ||||||| ||||||||| ||||||||||||
Sbjct: 347 acaatgtcctgcaccatctctctggttgca 318
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>emb|AJ937769.1| Uncultured epsilon proteobacterium fosmid clone b1dcf1.3.c08
          Length = 38167

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 223  ttgatgaagagaaaagaaaatttctt 248
            |||||||||||| |||||||||||||
Sbjct: 4748 ttgatgaagagacaagaaaatttctt 4723
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>emb|AJ347812.1|SPY347812 Streptococcus pyogenes partial sfbI gene for fibronectin-binding
           protein I, strain NS989
          Length = 1542

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 264 agatatttcctgggaccaagtgaaa 288
           ||||||||||||||| |||||||||
Sbjct: 603 agatatttcctgggagcaagtgaaa 627
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>emb|AJ347839.1|SPY347839 Streptococcus pyogenes sfbI gene for fibronectin-binding protein I,
           strain NS732
          Length = 1779

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 264 agatatttcctgggaccaagtgaaa 288
           ||||||||||||||| |||||||||
Sbjct: 628 agatatttcctgggagcaagtgaaa 652
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>emb|AJ347838.1|SPY347838 Streptococcus pyogenes sfbI gene for fibronectin-binding protein I,
           strain NS731
          Length = 1779

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 264 agatatttcctgggaccaagtgaaa 288
           ||||||||||||||| |||||||||
Sbjct: 628 agatatttcctgggagcaagtgaaa 652
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>emb|AJ347837.1|SPY347837 Streptococcus pyogenes sfbI gene for fibronectin-binding protein I,
           strain NS297
          Length = 1751

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 264 agatatttcctgggaccaagtgaaa 288
           ||||||||||||||| |||||||||
Sbjct: 609 agatatttcctgggagcaagtgaaa 633
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>emb|AJ347836.1|SPY347836 Streptococcus pyogenes sfbI gene for fibronectin-binding protein I,
           strain CATHY13
          Length = 1779

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 264 agatatttcctgggaccaagtgaaa 288
           ||||||||||||||| |||||||||
Sbjct: 628 agatatttcctgggagcaagtgaaa 652
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>emb|AJ347835.1|SPY347835 Streptococcus pyogenes sfbI gene for fibronectin-binding protein I,
           strain NS192
          Length = 2044

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 264 agatatttcctgggaccaagtgaaa 288
           ||||||||||||||| |||||||||
Sbjct: 628 agatatttcctgggagcaagtgaaa 652
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>emb|AJ347813.1|SPY347813 Streptococcus pyogenes partial sfbI gene for fibronectin-binding
           protein I, strain NS244
          Length = 1611

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 264 agatatttcctgggaccaagtgaaa 288
           ||||||||||||||| |||||||||
Sbjct: 603 agatatttcctgggagcaagtgaaa 627
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>emb|AJ347811.1|SPY347811 Streptococcus pyogenes partial sfbI gene for fibronectin-binding
           protein I, strain NS755
          Length = 1611

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 264 agatatttcctgggaccaagtgaaa 288
           ||||||||||||||| |||||||||
Sbjct: 603 agatatttcctgggagcaagtgaaa 627
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>emb|AJ347810.1|SPY347810 Streptococcus pyogenes partial sfbI gene for fibronectin-binding
           protein I, strain NS730
          Length = 1623

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 264 agatatttcctgggaccaagtgaaa 288
           ||||||||||||||| |||||||||
Sbjct: 621 agatatttcctgggagcaagtgaaa 645
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>emb|AJ347809.1|SPY347809 Streptococcus pyogenes partial sfbI gene for fibronectin-binding
           protein I, strain NS495
          Length = 1617

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 264 agatatttcctgggaccaagtgaaa 288
           ||||||||||||||| |||||||||
Sbjct: 603 agatatttcctgggagcaagtgaaa 627
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>emb|AJ347808.1|SPY347808 Streptococcus pyogenes partial sfbI gene for fibronectin-binding
           protein I, strain NS179
          Length = 1803

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 264 agatatttcctgggaccaagtgaaa 288
           ||||||||||||||| |||||||||
Sbjct: 603 agatatttcctgggagcaagtgaaa 627
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>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
            OSJNBa0095P22, complete sequence
          Length = 162766

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 222  cttgatgaagagaaaagaaaa 242
            |||||||||||||||||||||
Sbjct: 4103 cttgatgaagagaaaagaaaa 4083
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>gb|AC118346.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
            OSJNBa0039F06, complete sequence
          Length = 133022

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 222  cttgatgaagagaaaagaaaa 242
            |||||||||||||||||||||
Sbjct: 2432 cttgatgaagagaaaagaaaa 2452
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>gb|AC119420.12| Mus musculus strain 129S6/SvEvTac clone rp22-121i21 map 11, complete
             sequence
          Length = 168186

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 498   ttctgcaccatttctctggtt 518
             |||||||||||||||||||||
Sbjct: 74359 ttctgcaccatttctctggtt 74379
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>emb|AL604046.8| Mouse DNA sequence from clone RP23-206D6 on chromosome 11 Contains the
             genes for olfactory receptor MOR135-14 and -3 , two
             olfactory receptor MOR135 pseudogenes, the gene for a
             novel olfactory receptor family MOR135 member, a zinc
             finger protein pseudogene, the 5' end of the gene for a
             novel KRAB box domain containing protein and a CpG island,
             complete sequence
          Length = 194873

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 498   ttctgcaccatttctctggtt 518
             |||||||||||||||||||||
Sbjct: 52224 ttctgcaccatttctctggtt 52204
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>emb|AL611937.6| Mouse DNA sequence from clone RP23-221M24 on chromosome 11 Contains the
             genes for olfactory receptors MOR255-2, -1 and -6, a novel
             KRAB box containing protein, a high mobility group box 1
             (Hmgb1) pseudogene and a olfactory receptor MOR255
             pseudogene, complete sequence
          Length = 109397

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 498   ttctgcaccatttctctggtt 518
             |||||||||||||||||||||
Sbjct: 31503 ttctgcaccatttctctggtt 31483
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>emb|BX511227.7| Zebrafish DNA sequence from clone DKEY-100E19 in linkage group 14,
              complete sequence
          Length = 262038

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 548    cacaaaccaaaaacagtgaatcttc 572
              |||||| ||||||||||||||||||
Sbjct: 234120 cacaaatcaaaaacagtgaatcttc 234144
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>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome
          Length = 2694756

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 221    acttgatgaagagaaaagaaa 241
              |||||||||||||||||||||
Sbjct: 588762 acttgatgaagagaaaagaaa 588742
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 222      cttgatgaagagaaaagaaaa 242
                |||||||||||||||||||||
Sbjct: 24202994 cttgatgaagagaaaagaaaa 24202974
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 222     cttgatgaagagaaaagaaaa 242
               |||||||||||||||||||||
Sbjct: 3281634 cttgatgaagagaaaagaaaa 3281614
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>dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0029C06
          Length = 156500

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 222    cttgatgaagagaaaagaaaa 242
              |||||||||||||||||||||
Sbjct: 122341 cttgatgaagagaaaagaaaa 122321
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>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0556B08
          Length = 136775

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 222   cttgatgaagagaaaagaaaa 242
             |||||||||||||||||||||
Sbjct: 13930 cttgatgaagagaaaagaaaa 13910
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>dbj|AP005892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0011D16
          Length = 177329

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 222    cttgatgaagagaaaagaaaa 242
              |||||||||||||||||||||
Sbjct: 157947 cttgatgaagagaaaagaaaa 157927
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 222      cttgatgaagagaaaagaaaa 242
                |||||||||||||||||||||
Sbjct: 24514663 cttgatgaagagaaaagaaaa 24514643
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>gb|AE014828.1| Plasmodium falciparum 3D7 chromosome 14 section 13 of 13 of the
             complete sequence
          Length = 273275

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 392   taaagaatcagaaggaaata 411
             ||||||||||||||||||||
Sbjct: 83160 taaagaatcagaaggaaata 83141
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>gb|BT014615.1| Lycopersicon esculentum clone 134101F, mRNA sequence
          Length = 2298

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 587  tatgcataatacatgtacaa 606
            ||||||||||||||||||||
Sbjct: 1954 tatgcataatacatgtacaa 1935
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>gb|AC167711.1| Medicago truncatula chromosome 7 BAC clone mth2-167p21, complete
            sequence
          Length = 132340

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 223  ttgatgaagagaaaagaaaa 242
            ||||||||||||||||||||
Sbjct: 4801 ttgatgaagagaaaagaaaa 4820
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>gb|AC122847.4| Mus musculus BAC clone RP23-163F2 from 6, complete sequence
          Length = 193343

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 232   agaaaagaaaatttcttacatcca 255
             ||||||||||||||||| ||||||
Sbjct: 61205 agaaaagaaaatttctttcatcca 61182
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>gb|AC142284.1| Pan troglodytes BAC clone RP43-163P11 from 7, complete sequence
          Length = 171686

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 386    atttactaaagaatcagaag 405
              ||||||||||||||||||||
Sbjct: 105432 atttactaaagaatcagaag 105451
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>emb|AL035251.11|HS705O1 Human DNA sequence from clone RP4-705O1 on chromosome 20q11.2 Contains
             a novel gene, complete sequence
          Length = 161888

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   gatgaagagaaaagaaaatt 244
             ||||||||||||||||||||
Sbjct: 20896 gatgaagagaaaagaaaatt 20915
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>emb|AL138659.1|ATT16L24 Arabidopsis thaliana DNA chromosome 3, BAC clone T16L24
          Length = 91851

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   atgaagagaaaagaaaattt 245
             ||||||||||||||||||||
Sbjct: 42360 atgaagagaaaagaaaattt 42341
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>emb|AL671560.7| Mouse DNA sequence from clone RP23-149A5 on chromosome 1 Contains the 3'
              end of the Nrp2 gene for neuropilin 2, complete sequence
          Length = 157987

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 226    atgaagagaaaagaaaattt 245
              ||||||||||||||||||||
Sbjct: 151125 atgaagagaaaagaaaattt 151106
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>gb|AC023385.10| Homo sapiens chromosome 8, clone RP11-675P19, complete sequence
          Length = 167118

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 227    tgaagagaaaagaaaatttcttac 250
              ||||||||||| ||||||||||||
Sbjct: 133841 tgaagagaaaaaaaaatttcttac 133818
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>gb|AC024109.18| Homo sapiens 3 BAC RP11-32F4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 116166

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 485   attgatgacaatgttctgcaccat 508
             ||||||| ||||||||||||||||
Sbjct: 73269 attgatggcaatgttctgcaccat 73292
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>gb|AC079200.6| Homo sapiens chromosome 8, clone RP11-1058B24, complete sequence
          Length = 117978

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 227    tgaagagaaaagaaaatttcttac 250
              ||||||||||| ||||||||||||
Sbjct: 104296 tgaagagaaaaaaaaatttcttac 104319
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>gb|AC007923.7| Homo sapiens chromosome 17, clone RP11-805L22, complete sequence
          Length = 180270

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 372    aatttgtgtttcacatttac 391
              ||||||||||||||||||||
Sbjct: 158575 aatttgtgtttcacatttac 158594
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>gb|AC080009.13| Homo sapiens 3q BAC RP11-460M17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163469

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    gatgaagagaaaagaaaatt 244
              ||||||||||||||||||||
Sbjct: 132009 gatgaagagaaaagaaaatt 132028
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>gb|AC004886.1| Homo sapiens PAC clone RP4-784G16 from 7, complete sequence
          Length = 143364

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 386    atttactaaagaatcagaag 405
              ||||||||||||||||||||
Sbjct: 126928 atttactaaagaatcagaag 126947
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>gb|AY958432.1| Homo sapiens methionine sulfoxide reductase gene, complete cds,
              alternatively spliced
          Length = 379048

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 227    tgaagagaaaagaaaatttcttac 250
              ||||||||||| ||||||||||||
Sbjct: 129720 tgaagagaaaaaaaaatttcttac 129697
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>gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome 14, complete sequence
          Length = 199716

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   gatgaagagaaaagaaaatt 244
             ||||||||||||||||||||
Sbjct: 35138 gatgaagagaaaagaaaatt 35157
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>gb|AC006423.7|AC006423 Arabidopsis thaliana chromosome I BAC F28H19 genomic sequence, complete
              sequence
          Length = 131692

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    gatgaagagaaaagaaaatt 244
              ||||||||||||||||||||
Sbjct: 113979 gatgaagagaaaagaaaatt 113960
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>gb|AC174768.1| Gasterosteus aculeatus clone VMRC28-49C14, complete sequence
          Length = 142399

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 496    tgttctgcaccatttctctg 515
              ||||||||||||||||||||
Sbjct: 139075 tgttctgcaccatttctctg 139094


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,519,994
Number of Sequences: 3902068
Number of extensions: 6519994
Number of successful extensions: 207751
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 207412
Number of HSP's gapped (non-prelim): 337
length of query: 606
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 583
effective length of database: 17,143,297,704
effective search space: 9994542561432
effective search space used: 9994542561432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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