Clone Information

BLAST Search Result

Clone Name	rbaal16a18
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	JHD2A_MOUSE (Q6PCM1) JmjC domain-containing histone demethylatio...	37	0.078
2	JHD2A_HUMAN (Q9Y4C1) JmjC domain-containing histone demethylatio...	37	0.078
3	JHD2B_HUMAN (Q7LBC6) JmjC domain-containing histone demethylatio...	36	0.13
4	JHD2B_MOUSE (Q6ZPY7) JmjC domain-containing histone demethylatio...	36	0.13
5	JHD2A_RAT (Q63679) JmjC domain-containing histone demethylation ...	35	0.17
6	AKIB1_HUMAN (Q9P2G1) Ankyrin repeat and IBR domain-containing pr...	35	0.30
7	AKIB1_MOUSE (Q6ZPS6) Ankyrin repeat and IBR domain-containing pr...	35	0.30
8	JD2AA_XENLA (Q6IRB8) JmjC domain-containing histone demethylatio...	33	0.66
9	JD2AB_XENLA (Q5HZN1) JmjC domain-containing histone demethylatio...	33	0.66
10	HAIR_HUMAN (O43593) Protein hairless	33	1.1
11	JHD2C_HUMAN (Q15652) Probable JmjC domain-containing histone dem...	33	1.1
12	HAIR_RAT (P97609) Protein hairless	32	1.9
13	PAR3_RAT (Q920E1) Proteinase-activated receptor 3 precursor (PAR...	32	2.5
14	GLSK_RAT (P13264) Glutaminase kidney isoform, mitochondrial prec...	32	2.5
15	GLSK_HUMAN (O94925) Glutaminase kidney isoform, mitochondrial pr...	32	2.5
16	JHD2C_MOUSE (Q69ZK6) Probable JmjC domain-containing histone dem...	32	2.5
17	JHD2A_CHICK (Q5ZIX8) JmjC domain-containing histone demethylatio...	32	2.5
18	HUNB_DROVI (P13361) Protein hunchback	31	3.3
19	HAIR_MOUSE (Q61645) Protein hairless	31	3.3
20	KAD_SHEON (Q8EFF5) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transp...	31	4.3
21	GLSL_RAT (P28492) Glutaminase liver isoform, mitochondrial precu...	30	5.6
22	GLSL_MOUSE (Q571F8) Glutaminase liver isoform, mitochondrial pre...	30	5.6
23	GLSL_HUMAN (Q9UI32) Glutaminase liver isoform, mitochondrial pre...	30	5.6
24	FA8_PIG (P12263) Coagulation factor VIII precursor (Procoagulant...	30	5.6
25	NBR1_HUMAN (Q14596) Next to BRCA1 gene 1 protein (Neighbor of BR...	30	7.3
26	PALA_ASPOR (Q5KU05) pH-response regulator protein palA/RIM20	30	7.3
27	FKH1_XENLA (P33206) XFKH1 protein (XFD-1' protein)	30	7.3
28	NSBP1_MOUSE (Q9JL35) Nucleosome-binding protein 1 (Nucleosome-bi...	30	7.3
29	PGCA_MOUSE (Q61282) Aggrecan core protein precursor (Cartilage-s...	30	7.3
30	NBR1_PONPY (Q5RC94) Next to BRCA1 gene 1 protein (Neighbor of BR...	30	7.3
31	SASH1_HUMAN (O94885) SAM and SH3 domain-containing protein 1 (Pr...	30	7.3
32	UROM_RAT (P27590) Uromodulin precursor (Tamm-Horsfall urinary gl...	30	9.5
33	YS25_CAEEL (Q09366) Hypothetical protein ZK1320.5	30	9.5
34	DGTP_SHIFL (Q83MD6) Deoxyguanosinetriphosphate triphosphohydrola...	30	9.5
35	DGTP_ESCFE (Q59435) Deoxyguanosinetriphosphate triphosphohydrola...	30	9.5
36	DGTP_ECOLI (P15723) Deoxyguanosinetriphosphate triphosphohydrola...	30	9.5
37	DGTP_ECOL6 (Q8FL13) Deoxyguanosinetriphosphate triphosphohydrola...	30	9.5
38	DGTP_ECO57 (Q8X8Y9) Deoxyguanosinetriphosphate triphosphohydrola...	30	9.5
39	CSOB_ECOLI (P25731) CS1 fimbrial subunit B precursor	30	9.5
40	Y211_PASMU (Q9CP49) UPF0276 protein PM0211	30	9.5

>JHD2A_MOUSE (Q6PCM1) JmjC domain-containing histone demethylation protein 2A (EC|
            1.14.11.-) (Jumonji domain-containing protein 1A)
          Length = 1323

 Score = 36.6 bits (83), Expect = 0.078
 Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
 Frame = -2

Query: 681  KVPQANCAKNERIFCNNCRTSIVDFHRSCTKCSYDLCLICCRELRLGRCPGGGA---ASN 511
            +V      K  R  C+ C T+I + H  C +C + +C+ C R ++   C  G A    S 
Sbjct: 648  QVAWKRAVKGVREMCDVCDTTIFNLHWVCPRCGFGVCVDCYR-MKRKNCQQGAAYKTFSW 706

Query: 510  TVLTQPEVEGKEDLQQTRSDDIAVS*KIPDGQNGLLRNRAVPVEDSAAVASSMVFTQPEV 331
                + ++   E+L  T+         + D  + +     +      +     +F++P +
Sbjct: 707  IRCVKSQIHEPENLMPTQIIPGKALYDVGDIVHSVRAKWGIKANCPCSNRQFKLFSKPAL 766

Query: 330  EGKEDLQQTS 301
              KEDL+QTS
Sbjct: 767  --KEDLKQTS 774

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>JHD2A_HUMAN (Q9Y4C1) JmjC domain-containing histone demethylation protein 2A (EC|
            1.14.11.-) (Jumonji domain-containing protein 1A)
          Length = 1321

 Score = 36.6 bits (83), Expect = 0.078
 Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 3/130 (2%)
 Frame = -2

Query: 681  KVPQANCAKNERIFCNNCRTSIVDFHRSCTKCSYDLCLICCRELRLGRCPGGGA---ASN 511
            +V      K  R  C+ C T+I + H  C +C + +C+ C R ++   C  G A    S 
Sbjct: 648  QVAWKRAVKGVREMCDVCDTTIFNLHWVCPRCGFGVCVDCYR-MKRKNCQQGAAYKTFSW 706

Query: 510  TVLTQPEVEGKEDLQQTRSDDIAVS*KIPDGQNGLLRNRAVPVEDSAAVASSMVFTQPEV 331
                + ++   E+L  T+         + D  + +     +      +     +F++P  
Sbjct: 707  LKCVKSQIHEPENLMPTQIIPGKALYDVGDIVHSVRAKWGIKANCPCSNRQFKLFSKP-- 764

Query: 330  EGKEDLQQTS 301
              KEDL+QTS
Sbjct: 765  ASKEDLKQTS 774

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>JHD2B_HUMAN (Q7LBC6) JmjC domain-containing histone demethylation protein 2B (EC|
            1.14.11.-) (Jumonji domain-containing protein 1B)
            (Nuclear protein 5qNCA)
          Length = 1761

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 681  KVPQANCAKNERIFCNNCRTSIVDFHRSCTKCSYDLCLICCR 556
            KV      +  R  C+ C T++ + H  C KC + +CL C R
Sbjct: 1017 KVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYR 1058

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>JHD2B_MOUSE (Q6ZPY7) JmjC domain-containing histone demethylation protein 2B|
           (EC 1.14.11.-) (Jumonji domain-containing protein 1B)
          Length = 1562

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 681 KVPQANCAKNERIFCNNCRTSIVDFHRSCTKCSYDLCLICCR 556
           KV      +  R  C+ C T++ + H  C KC + +CL C R
Sbjct: 818 KVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYR 859

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>JHD2A_RAT (Q63679) JmjC domain-containing histone demethylation protein 2A|
           (EC 1.14.11.-) (Jumonji domain-containing protein 1A)
           (Testis-specific gene A protein) (Zinc-finger protein
           TSGA)
          Length = 1214

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -2

Query: 681 KVPQANCAKNERIFCNNCRTSIVDFHRSCTKCSYDLCLICCRELRLGRCPGGGA 520
           +V      K  R  C+ C T+I + H  C +C + +C+ C R L+   C  G A
Sbjct: 532 QVAWKRAVKGVREMCDVCDTTIFNLHWVCPRCGFGVCVDCYR-LKRKNCQQGAA 584

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>AKIB1_HUMAN (Q9P2G1) Ankyrin repeat and IBR domain-containing protein 1|
           (Fragment)
          Length = 1214

 Score = 34.7 bits (78), Expect = 0.30
 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
 Frame = -2

Query: 639 CNNCRTSIVDF----HRSCTKCSYDLCLICCRELRLGRCPGGGAASNT---VLTQPEVEG 481
           C NC++ I       H  C KC YD C IC  E +      GG    T   V+   E + 
Sbjct: 644 CANCKSPIQKNEGCNHMQCAKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQHVEEQS 703

Query: 480 KE 475
           KE
Sbjct: 704 KE 705

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>AKIB1_MOUSE (Q6ZPS6) Ankyrin repeat and IBR domain-containing protein 1|
           (Fragment)
          Length = 1087

 Score = 34.7 bits (78), Expect = 0.30
 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
 Frame = -2

Query: 639 CNNCRTSIVDF----HRSCTKCSYDLCLICCRELRLGRCPGGGAASNT---VLTQPEVEG 481
           C NC++ I       H  C KC YD C IC  E +      GG    T   V+   E + 
Sbjct: 522 CANCKSPIQKNEGCNHMQCAKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQHVEEQS 581

Query: 480 KE 475
           KE
Sbjct: 582 KE 583

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>JD2AA_XENLA (Q6IRB8) JmjC domain-containing histone demethylation protein 2A-A|
           (EC 1.14.11.-) (Jumonji domain-containing protein 1A-A)
          Length = 1331

 Score = 33.5 bits (75), Expect = 0.66
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -2

Query: 681 KVPQANCAKNERIFCNNCRTSIVDFHRSCTKCSYDLCLICCR 556
           +V      +  R  C+ C T+I + H  C KC + +C+ C R
Sbjct: 669 QVAWKRAVRGVREMCDACDTTIFNLHWVCPKCGFGVCVDCYR 710

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>JD2AB_XENLA (Q5HZN1) JmjC domain-containing histone demethylation protein 2A-B|
           (EC 1.14.11.-) (Jumonji domain-containing protein 1A-B)
          Length = 1334

 Score = 33.5 bits (75), Expect = 0.66
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -2

Query: 681 KVPQANCAKNERIFCNNCRTSIVDFHRSCTKCSYDLCLICCR 556
           +V      +  R  C+ C T+I + H  C KC + +C+ C R
Sbjct: 670 QVAWKRAVRGVREMCDACDTTIFNLHWVCPKCGFGVCVDCYR 711

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>HAIR_HUMAN (O43593) Protein hairless|
          Length = 1189

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -2

Query: 639 CNNCRTSIVDFHRSCTKCSYDLCLICCRELRLGR 538
           C+ C   + + H  C +CS+ LC+ C R    GR
Sbjct: 600 CSRCHHGLFNTHWRCPRCSHRLCVACGRVAGTGR 633

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>JHD2C_HUMAN (Q15652) Probable JmjC domain-containing histone demethylation|
            protein 2C (EC 1.14.11.-) (Jumonji domain-containing
            protein 1C) (Thyroid receptor-interacting protein 8)
            (TRIP-8)
          Length = 2540

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -2

Query: 687  EVKVPQANCAKNERIFCNNCRTSIVDFHRSCTKCSYDLCLIC 562
            + K+      +  R  C+ C  ++ + H  C KC + +CL C
Sbjct: 1830 DAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDC 1871

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>HAIR_RAT (P97609) Protein hairless|
          Length = 1181

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 16/64 (25%)
 Frame = -2

Query: 639 CNNCRTSIVDFHRSCTKCSYDLCLIC--------------CRELRLGRC--PGGGAASNT 508
           C+ C   + + H  C+ CS+ LC+ C               RE R   C    G AA + 
Sbjct: 594 CSRCHHGLFNTHWRCSHCSHRLCVACGRIAGAGKNREKTGSREQRTDDCAQEAGHAACSL 653

Query: 507 VLTQ 496
           +LTQ
Sbjct: 654 ILTQ 657

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>PAR3_RAT (Q920E1) Proteinase-activated receptor 3 precursor (PAR-3)|
           (Thrombin receptor-like 2) (Coagulation factor II
           receptor-like 2)
          Length = 368

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
 Frame = +3

Query: 360 LQQQHYPQQELPCSSTGHSVHQ--ESFNSQQYHHYVSVANLPCLLPRVV*GPCYLQHHHQ 533
           L+Q+++  Q  P  +T H VH   ES    Q++++VS+A    L+P VV   CY    H+
Sbjct: 229 LKQEYHLVQ--PGITTCHDVHDTCESPLPFQFYYFVSLAFFGFLIPFVVSVFCYTTLIHK 286

Query: 534 DSAQD 548
            +AQD
Sbjct: 287 LNAQD 291

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>GLSK_RAT (P13264) Glutaminase kidney isoform, mitochondrial precursor (EC|
           3.5.1.2) (GLS) (L-glutamine amidohydrolase)
           (K-glutaminase) [Contains: Glutaminase kidney isoform 68
           kDa chain; Glutaminase kidney isoform 65 kDa chain]
          Length = 674

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
 Frame = +1

Query: 322 LAFYLRLCKDHATCNSSTILNRN------CPVPQQAILSIRNLLTHSNIITTCLLQIF-- 477
           L FY +LC    TC S++++         CP+  + +LS   +    +++ +C +  F  
Sbjct: 416 LDFYFQLCSIEVTCESASVMAATLANGGFCPITGERVLSPEAVRNTLSLMHSCGMYDFSG 475

Query: 478 -LAFYLGL 498
             AF++GL
Sbjct: 476 QFAFHVGL 483

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>GLSK_HUMAN (O94925) Glutaminase kidney isoform, mitochondrial precursor (EC|
           3.5.1.2) (GLS) (L-glutamine amidohydrolase)
           (K-glutaminase)
          Length = 669

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
 Frame = +1

Query: 322 LAFYLRLCKDHATCNSSTILNRN------CPVPQQAILSIRNLLTHSNIITTCLLQIF-- 477
           L FY +LC    TC S++++         CP+  + +LS   +    +++ +C +  F  
Sbjct: 411 LDFYFQLCSIEVTCESASVMAATLANGGFCPITGERVLSPEAVRNTLSLMHSCGMYDFSG 470

Query: 478 -LAFYLGL 498
             AF++GL
Sbjct: 471 QFAFHVGL 478

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>JHD2C_MOUSE (Q69ZK6) Probable JmjC domain-containing histone demethylation|
            protein 2C (EC 1.14.11.-) (Jumonji domain-containing
            protein 1C)
          Length = 2350

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = -2

Query: 687  EVKVPQANCAKNERIFCNNCRTSIVDFHRSCTKCSYDLCLIC 562
            + K+      +  R  C+ C  ++ + H  C KC +  CL C
Sbjct: 1641 DAKIAWKRAVRGVREMCDACEATLFNVHWVCRKCGFVACLDC 1682

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>JHD2A_CHICK (Q5ZIX8) JmjC domain-containing histone demethylation protein 2A|
           (EC 1.14.11.-) (Jumonji domain-containing protein 1A)
          Length = 1325

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -2

Query: 681 KVPQANCAKNERIFCNNCRTSIVDFHRSCTKCSYDLCLICCRELRLG 541
           +V      +  R  C+ C T+I +    C+KC + +C+ C R  + G
Sbjct: 655 QVAWKRAVRGVREMCDVCDTTIFNLRWVCSKCGFGVCVDCYRMRKKG 701

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>HUNB_DROVI (P13361) Protein hunchback|
          Length = 816

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = +2

Query: 68  VFTLQVDIDHLNYHHIEESCGHHDEHNRDETGL-----HPVPPTLPP 193
           +F   +  + L++HH      HHD H+   +G       P+P  +PP
Sbjct: 23  MFAANIKQEPLSHHHHHHGQQHHDNHSNSNSGASSPRQSPLPSPIPP 69

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>HAIR_MOUSE (Q61645) Protein hairless|
          Length = 1182

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -2

Query: 639 CNNCRTSIVDFHRSCTKCSYDLCLICCRELRLGRCPGGG 523
           C+ C   + + H  C+ CS+ LC+ C      GR  G G
Sbjct: 595 CSRCHHGLFNTHWRCSHCSHRLCVAC------GRIAGAG 627

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>KAD_SHEON (Q8EFF5) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
          Length = 214

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -2

Query: 534 PGGGAASNTVLTQPEVEGKEDLQQTRSDDIAVS*KIPDGQNGLLRNR 394
           PG G   + V   P+VEGK+D+     +D+A+    PD +   +R R
Sbjct: 127 PGSGRVYHVVFNPPKVEGKDDV---TGEDLAIR---PDDEEATVRKR 167

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>GLSL_RAT (P28492) Glutaminase liver isoform, mitochondrial precursor (EC|
           3.5.1.2) (GLS) (L-glutamine amidohydrolase)
           (L-glutaminase)
          Length = 602

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
 Frame = +1

Query: 322 LAFYLRLCKDHATCNSSTILNRN------CPVPQQAILSIRNLLTHSNIITTCLLQIF-- 477
           L  Y +LC    TC S +++         CP+  +++LS   +    +++ +C +  F  
Sbjct: 344 LDLYFQLCSVEVTCESGSVMAATLANGGICPITGESVLSAEAVRNTLSLMHSCGMYDFSG 403

Query: 478 -LAFYLGL 498
             AF++GL
Sbjct: 404 QFAFHVGL 411

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>GLSL_MOUSE (Q571F8) Glutaminase liver isoform, mitochondrial precursor (EC|
           3.5.1.2) (GLS) (L-glutamine amidohydrolase)
           (L-glutaminase)
          Length = 602

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
 Frame = +1

Query: 322 LAFYLRLCKDHATCNSSTILNRN------CPVPQQAILSIRNLLTHSNIITTCLLQIF-- 477
           L  Y +LC    TC S +++         CP+  +++LS   +    +++ +C +  F  
Sbjct: 344 LDLYFQLCSVEVTCESGSVMAATLANGGICPITGESVLSAEAVRNTLSLMHSCGMYDFSG 403

Query: 478 -LAFYLGL 498
             AF++GL
Sbjct: 404 QFAFHVGL 411

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>GLSL_HUMAN (Q9UI32) Glutaminase liver isoform, mitochondrial precursor (EC|
           3.5.1.2) (GLS) (L-glutamine amidohydrolase)
           (L-glutaminase)
          Length = 602

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
 Frame = +1

Query: 322 LAFYLRLCKDHATCNSSTILNRN------CPVPQQAILSIRNLLTHSNIITTCLLQIF-- 477
           L  Y +LC    TC S +++         CP+  +++LS   +    +++ +C +  F  
Sbjct: 344 LDLYFQLCSVEVTCESGSVMAATLANGGICPITGESVLSAEAVRNTLSLMHSCGMYDFSG 403

Query: 478 -LAFYLGL 498
             AF++GL
Sbjct: 404 QFAFHVGL 411

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>FA8_PIG (P12263) Coagulation factor VIII precursor (Procoagulant component)|
          Length = 2133

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 17/67 (25%), Positives = 29/67 (43%)
 Frame = -3

Query: 245 HHKGGCGSYIRALSSGREEGVLEEPDEDQFHRDYAHRDDRSSLLCDGSLDDRYRLVM*RQ 66
           HH GG  +++R  S   E  +  + DE++ + D  +  D   +  DG  DD    +  R 
Sbjct: 335 HHHGGMEAHVRVESCAEEPQLRRKADEEEDYDDNLYDSDMDVVRLDG--DDVSPFIQIRS 392

Query: 65  TCYSRPR 45
                P+
Sbjct: 393 VAKKHPK 399

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>NBR1_HUMAN (Q14596) Next to BRCA1 gene 1 protein (Neighbor of BRCA1 gene 1|
           protein) (Membrane component, chromosome 17, surface
           marker 2) (1A1-3B)
          Length = 966

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -2

Query: 645 IFCNNCRTSIVDFHRSCTKC-SYDLCLIC 562
           I CNNC+  IV     C+ C SY++C  C
Sbjct: 215 IACNNCQRRIVGVRYQCSLCPSYNICEDC 243

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>PALA_ASPOR (Q5KU05) pH-response regulator protein palA/RIM20|
          Length = 828

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 20/54 (37%), Positives = 27/54 (50%)
 Frame = -2

Query: 381 EDSAAVASSMVFTQPEVEGKEDLQQTSSDDNSVSQKLSDGQSIKGTPQGRMRKL 220
           E S A AS +  T  E++G     Q+S  DN V QKL D +++     G  R L
Sbjct: 486 EPSEAAASKLYTTAREIDGYFSSAQSS--DNLVEQKLRDSEAVFRVLTGTNRDL 537

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>FKH1_XENLA (P33206) XFKH1 protein (XFD-1' protein)|
          Length = 400

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 363 QQQHYPQQELPCSSTGHSVHQESFNSQQYHHYVS 464
           Q Q YP +   C +T H VH  +++S  YH+ VS
Sbjct: 338 QDQTYPNKMEMCPTTDHLVHYSNYSS-DYHNLVS 370

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>NSBP1_MOUSE (Q9JL35) Nucleosome-binding protein 1 (Nucleosome-binding protein|
           45) (NBP-45) (GARP45 protein)
          Length = 406

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
 Frame = -2

Query: 498 QPEVEGKEDL-QQTRSDDIAVS*KIPDGQNGLLRNRAVPVEDSAAV--ASSMVFTQPEVE 328
           QPE +GKEDL ++   +D+       DG+ G       P ED   +         QPE +
Sbjct: 239 QPEEDGKEDLHEEVGKEDLHEE----DGKEGQ------PEEDGKEIHHEEDGKEGQPEED 288

Query: 327 GKEDLQQTSSDDNSVSQKLSDGQ 259
           GKE L +   ++    +   +GQ
Sbjct: 289 GKEYLHEEDGEEGQPKEDQKEGQ 311

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>PGCA_MOUSE (Q61282) Aggrecan core protein precursor (Cartilage-specific|
            proteoglycan core protein) (CSPCP)
          Length = 2132

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 7/111 (6%)
 Frame = -2

Query: 546  LGRCPGGGAASNTVLTQPEV-----EGKEDLQQTRS--DDIAVS*KIPDGQNGLLRNRAV 388
            L   P GG  + T  +  E       G + L+ + S  DD++    IP G+ GL    A 
Sbjct: 908  LSGLPSGGEITETSTSGAEETSGLPSGGDGLETSTSGVDDVS---GIPTGREGL-ETSAS 963

Query: 387  PVEDSAAVASSMVFTQPEVEGKEDLQQTSSDDNSVSQKLSDGQSIKGTPQG 235
             VED + + S    ++    G ED+    +   S+    S    + G P G
Sbjct: 964  GVEDLSGLPSGEEGSETSTSGIEDISVLPTGGESLETSASGVGDLSGLPSG 1014

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>NBR1_PONPY (Q5RC94) Next to BRCA1 gene 1 protein (Neighbor of BRCA1 gene 1|
           protein)
          Length = 894

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -2

Query: 645 IFCNNCRTSIVDFHRSCTKC-SYDLCLIC 562
           I CNNC+  IV     C+ C SY++C  C
Sbjct: 215 IACNNCQRRIVGVRYQCSLCPSYNICEDC 243

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>SASH1_HUMAN (O94885) SAM and SH3 domain-containing protein 1 (Proline-glutamate|
           repeat-containing protein)
          Length = 1247

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
 Frame = -2

Query: 486 EGKEDLQQTR-SDDIAVS*KIPDGQNGLLRNRAVPVEDSAAVASSMVFTQPEVEGKEDLQ 310
           E  E+L++ R S D+ V  + PD     L+ R+  +E+S    S++  + PEVE K  L 
Sbjct: 79  ERMEELRKRRVSQDLEV--EKPDASPTSLQLRS-QIEESLGFCSAV--STPEVERKNPLH 133

Query: 309 QTSSDDNSVSQ 277
           +++S+D+SV +
Sbjct: 134 KSNSEDSSVGK 144

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>UROM_RAT (P27590) Uromodulin precursor (Tamm-Horsfall urinary glycoprotein)|
           (THP)
          Length = 644

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = -2

Query: 702 GIDACEVKVPQANCAKNERIFCNNCRTSIVDFHRSCTKCSY--DLCLICCRELRLGRCPG 529
           G+   E  VP   C     ++ N    S  +   S T C++  D C +   E+++  CPG
Sbjct: 213 GVRMAETCVPVLRCNTAAPMWLNGSHPSSREGIVSRTACAHWSDHCCLWSTEIQVKACPG 272

Query: 528 GGAASNTVLTQP 493
           G    N  LT+P
Sbjct: 273 GFYVYN--LTEP 282

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>YS25_CAEEL (Q09366) Hypothetical protein ZK1320.5|
          Length = 414

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 30/120 (25%), Positives = 49/120 (40%)
 Frame = +1

Query: 289 VIITTCLLQIFLAFYLRLCKDHATCNSSTILNRNCPVPQQAILSIRNLLTHSNIITTCLL 468
           V  T+CL+   +  YL LC   AT       +R+   P+    ++R  L+ ++I+  C  
Sbjct: 6   VFFTSCLILSVVGVYLNLCYLRAT-------HRSTVYPKFTGNNLR-FLSVAHIVLACSN 57

Query: 469 QIFLAFYLGLCKDRVTCSTTTRTAPKTKLPAANEAEIIGTFSTTSVEVNYRCSAVVTEYP 648
            +  A   G   +R T S    +   T L  +     +  F TT   + Y  S  + E P
Sbjct: 58  VVAAAAMWGANVNRTTKSEAFFS---TTLSVSRAIPALTVFWTTVERITYNRSPTIRESP 114

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>DGTP_SHIFL (Q83MD6) Deoxyguanosinetriphosphate triphosphohydrolase (EC|
           3.1.5.1) (dGTPase) (dGTP triphosphohydrolase)
          Length = 504

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 35  ITNLEDASNKFVFTLQVDIDHLNYHHIEESCGHHDE 142
           + +LEDA  K +FT++       YHH+ E+ G H++
Sbjct: 273 VADLEDAVEKRIFTVEQ-----LYHHLHEAWGQHEK 303

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>DGTP_ESCFE (Q59435) Deoxyguanosinetriphosphate triphosphohydrolase (EC|
           3.1.5.1) (dGTPase) (dGTP triphosphohydrolase)
          Length = 504

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 35  ITNLEDASNKFVFTLQVDIDHLNYHHIEESCGHHDE 142
           + +LEDA  K +FT++       YHH+ E+ G H++
Sbjct: 273 VADLEDAVEKRIFTVEQ-----LYHHLHEAWGQHEK 303

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>DGTP_ECOLI (P15723) Deoxyguanosinetriphosphate triphosphohydrolase (EC|
           3.1.5.1) (dGTPase) (dGTP triphosphohydrolase)
          Length = 504

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 35  ITNLEDASNKFVFTLQVDIDHLNYHHIEESCGHHDE 142
           + +LEDA  K +FT++       YHH+ E+ G H++
Sbjct: 273 VADLEDAVEKRIFTVEQ-----LYHHLHEAWGQHEK 303

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>DGTP_ECOL6 (Q8FL13) Deoxyguanosinetriphosphate triphosphohydrolase (EC|
           3.1.5.1) (dGTPase) (dGTP triphosphohydrolase)
          Length = 504

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 35  ITNLEDASNKFVFTLQVDIDHLNYHHIEESCGHHDE 142
           + +LEDA  K +FT++       YHH+ E+ G H++
Sbjct: 273 VADLEDAVEKRIFTVEQ-----LYHHLHEAWGQHEK 303

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>DGTP_ECO57 (Q8X8Y9) Deoxyguanosinetriphosphate triphosphohydrolase (EC|
           3.1.5.1) (dGTPase) (dGTP triphosphohydrolase)
          Length = 504

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 35  ITNLEDASNKFVFTLQVDIDHLNYHHIEESCGHHDE 142
           + +LEDA  K +FT++       YHH+ E+ G H++
Sbjct: 273 VADLEDAVEKRIFTVEQ-----LYHHLHEAWGQHEK 303

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>CSOB_ECOLI (P25731) CS1 fimbrial subunit B precursor|
          Length = 238

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 21/84 (25%), Positives = 43/84 (51%)
 Frame = -2

Query: 534 PGGGAASNTVLTQPEVEGKEDLQQTRSDDIAVS*KIPDGQNGLLRNRAVPVEDSAAVASS 355
           PGGG+ S   L+Q +    ED+ +   + I      P+ Q+GL +N+++  + S  +  +
Sbjct: 85  PGGGSKS-VRLSQLKDISSEDVYRVYFESIK-----PEKQDGLSKNKSLKTDLSVNIIYA 138

Query: 354 MVFTQPEVEGKEDLQQTSSDDNSV 283
            +      +GK D++ + S  +S+
Sbjct: 139 ALIRVLPKDGKSDMRASLSPKSSL 162

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>Y211_PASMU (Q9CP49) UPF0276 protein PM0211|
          Length = 307

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 59  NKFVFTLQVDIDHLNYHHIEESCGHHDEHNRDETGLHPVPPT 184
           N +VF   VD+  +NY HI    GH +EH       +P+ P+
Sbjct: 187 NPYVFLDHVDVSRVNYIHI---AGHDEEHG----AANPISPS 221


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,441,599
Number of Sequences: 219361
Number of extensions: 1944027
Number of successful extensions: 6394
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 5887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6353
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7196276819
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result