ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal16a17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK099712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082G14, full insert sequence Length = 2680 Score = 379 bits (191), Expect = e-102 Identities = 346/398 (86%), Gaps = 6/398 (1%) Strand = Plus / Minus Query: 111 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 170 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 2548 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 2495 Query: 171 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 230 ||||| | | | ||||| | || |||||||||||||||| |||||| | ||||| ||| Sbjct: 2494 gcggcggcgccggcgccagacgctggctggtcagcgaacctaaactcggtgccgaaccca 2435 Query: 231 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 290 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2434 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 2375 Query: 291 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 350 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 2374 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 2315 Query: 351 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 410 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 2314 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 2255 Query: 411 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 470 ||||| || |||||||| |||||||| || ||||| ||||||||||| ||||| || ||| Sbjct: 2254 tccttttcaatgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaata 2195 Query: 471 tcagcaccgctgaacccttgggtgtacttggcaagagc 508 |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 2194 tcagcaccactgaaaccttgggtgtatttggcaagagc 2157
>dbj|AK099889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112O07, full insert sequence Length = 2685 Score = 379 bits (191), Expect = e-102 Identities = 346/398 (86%), Gaps = 6/398 (1%) Strand = Plus / Minus Query: 111 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 170 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 2548 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 2495 Query: 171 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 230 ||||| | | | ||||| | || |||||||||||||||| |||||| | ||||| ||| Sbjct: 2494 gcggcggcgccggcgccagacgctggctggtcagcgaacctaaactcggtgccgaaccca 2435 Query: 231 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 290 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2434 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 2375 Query: 291 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 350 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 2374 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 2315 Query: 351 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 410 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 2314 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 2255 Query: 411 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 470 ||||| || |||||||| |||||||| || ||||| ||||||||||| ||||| || ||| Sbjct: 2254 tccttttcaatgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaata 2195 Query: 471 tcagcaccgctgaacccttgggtgtacttggcaagagc 508 |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 2194 tcagcaccactgaaaccttgggtgtatttggcaagagc 2157
>dbj|AK098980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093N05, full insert sequence Length = 2701 Score = 379 bits (191), Expect = e-102 Identities = 346/398 (86%), Gaps = 6/398 (1%) Strand = Plus / Minus Query: 111 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 170 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 2548 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 2495 Query: 171 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 230 ||||| | | | ||||| | || |||||||||||||||| |||||| | ||||| ||| Sbjct: 2494 gcggcggcgccggcgccagacgctggctggtcagcgaacctaaactcggtgccgaaccca 2435 Query: 231 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 290 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2434 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 2375 Query: 291 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 350 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 2374 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 2315 Query: 351 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 410 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 2314 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 2255 Query: 411 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 470 ||||| || |||||||| |||||||| || ||||| ||||||||||| ||||| || ||| Sbjct: 2254 tccttttcaatgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaata 2195 Query: 471 tcagcaccgctgaacccttgggtgtacttggcaagagc 508 |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 2194 tcagcaccactgaaaccttgggtgtatttggcaagagc 2157
>dbj|AK098874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D04, full insert sequence Length = 2685 Score = 379 bits (191), Expect = e-102 Identities = 346/398 (86%), Gaps = 6/398 (1%) Strand = Plus / Minus Query: 111 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 170 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 2548 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 2495 Query: 171 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 230 ||||| | | | ||||| | || |||||||||||||||| |||||| | ||||| ||| Sbjct: 2494 gcggcggcgccggcgccagacgctggctggtcagcgaacctaaactcggtgccgaaccca 2435 Query: 231 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 290 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2434 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 2375 Query: 291 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 350 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 2374 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 2315 Query: 351 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 410 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 2314 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 2255 Query: 411 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 470 ||||| || |||||||| |||||||| || ||||| ||||||||||| ||||| || ||| Sbjct: 2254 tccttttcaatgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaata 2195 Query: 471 tcagcaccgctgaacccttgggtgtacttggcaagagc 508 |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 2194 tcagcaccactgaaaccttgggtgtatttggcaagagc 2157
>dbj|AK064955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A05, full insert sequence Length = 2685 Score = 379 bits (191), Expect = e-102 Identities = 346/398 (86%), Gaps = 6/398 (1%) Strand = Plus / Minus Query: 111 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 170 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 2548 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 2495 Query: 171 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 230 ||||| | | | ||||| | || |||||||||||||||| |||||| | ||||| ||| Sbjct: 2494 gcggcggcgccggcgccagacgctggctggtcagcgaacctaaactcggtgccgaaccca 2435 Query: 231 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 290 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2434 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 2375 Query: 291 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 350 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 2374 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 2315 Query: 351 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 410 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 2314 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 2255 Query: 411 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 470 ||||| || |||||||| |||||||| || ||||| ||||||||||| ||||| || ||| Sbjct: 2254 tccttttcaatgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaata 2195 Query: 471 tcagcaccgctgaacccttgggtgtacttggcaagagc 508 |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 2194 tcagcaccactgaaaccttgggtgtatttggcaagagc 2157
>dbj|AK059991.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B06, full insert sequence Length = 1232 Score = 379 bits (191), Expect = e-102 Identities = 346/398 (86%), Gaps = 6/398 (1%) Strand = Plus / Minus Query: 111 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 170 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 1100 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 1047 Query: 171 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 230 ||||| | | | ||||| | || |||||||||||||||| |||||| | ||||| ||| Sbjct: 1046 gcggcggcgccggcgccagacgctggctggtcagcgaacctaaactcggtgccgaaccca 987 Query: 231 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 290 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 986 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 927 Query: 291 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 350 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 926 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 867 Query: 351 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 410 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 866 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 807 Query: 411 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 470 ||||| || |||||||| |||||||| || ||||| ||||||||||| ||||| || ||| Sbjct: 806 tccttttcaatgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaata 747 Query: 471 tcagcaccgctgaacccttgggtgtacttggcaagagc 508 |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 746 tcagcaccactgaaaccttgggtgtatttggcaagagc 709
>dbj|AK121641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055F21, full insert sequence Length = 2914 Score = 371 bits (187), Expect = 2e-99 Identities = 345/398 (86%), Gaps = 6/398 (1%) Strand = Plus / Minus Query: 111 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 170 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 2548 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 2495 Query: 171 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 230 ||||| | | | ||||| | || |||||||||| ||||| |||||| | ||||| ||| Sbjct: 2494 gcggcggcgccggcgccagacgctggctggtcagtgaacctaaactcggtgccgaaccca 2435 Query: 231 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 290 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2434 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 2375 Query: 291 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 350 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 2374 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 2315 Query: 351 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 410 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 2314 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 2255 Query: 411 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 470 ||||| || |||||||| |||||||| || ||||| ||||||||||| ||||| || ||| Sbjct: 2254 tccttttcaatgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaata 2195 Query: 471 tcagcaccgctgaacccttgggtgtacttggcaagagc 508 |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 2194 tcagcaccactgaaaccttgggtgtatttggcaagagc 2157
>gb|AY107375.1| Zea mays PCO097021 mRNA sequence Length = 711 Score = 331 bits (167), Expect = 1e-87 Identities = 269/303 (88%) Strand = Plus / Minus Query: 206 gaaccggaactcgctcccgaatccacgagactgctgcagcgtctgggcaaaggcctggta 265 ||||||||||||||| || || ||||| |||||||| || |||||||| ||||||||||| Sbjct: 374 gaaccggaactcgctgccaaacccacgggactgctggagtgtctgggcgaaggcctggta 315 Query: 266 cttgcggatgtcggcgtcactcacactacgacgcgcatacttcatcgactcctcgaagtg 325 ||||||||||||||| ||||| ||||| || || || |||||||| |||||||||||||| Sbjct: 314 cttgcggatgtcggcatcactgacactgcggcgggcgtacttcatggactcctcgaagtg 255 Query: 326 ggcagccctgatctctgcaacctcatcaacctcgtcctcctccatcgcttcagggttgtc 385 ||||||| ||||||| |||| || || |||||||| |||||||| || ||||||||||| Sbjct: 254 ggcagccatgatctcggcaatgtcgtccacctcgtcttcctccatggcctcagggttgtc 195 Query: 386 cttcctccgcctctccctctcgatgtccttctcgatgttctccctgatggcatacttgca 445 |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 cttcctgcgcctctcccgctcgatgtccttctcgatgttctccctgatggcatacttgca 135 Query: 446 agcacgctggcaaatttcagtgatatcagcaccgctgaacccttgggtgtacttggcaag 505 ||||||||||| || || |||||||| || || ||||| || ||||||||||||||||| Sbjct: 134 cgcacgctggcagatctcggtgatatctgctccactgaaaccctgggtgtacttggcaag 75 Query: 506 agc 508 ||| Sbjct: 74 agc 72 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 147 gcggatgcaaaagggtcggccgcagcggcag 177 ||||||||||| |||||||||||| |||||| Sbjct: 424 gcggatgcaaaggggtcggccgcaccggcag 394
>gb|AY108324.1| Zea mays PCO097023 mRNA sequence Length = 1794 Score = 299 bits (151), Expect = 5e-78 Identities = 265/303 (87%) Strand = Plus / Minus Query: 206 gaaccggaactcgctcccgaatccacgagactgctgcagcgtctgggcaaaggcctggta 265 ||||||||||||||| || || || || |||||||| || |||||||| ||||||||||| Sbjct: 1448 gaaccggaactcgctgccaaacccgcgggactgctggagtgtctgggcgaaggcctggta 1389 Query: 266 cttgcggatgtcggcgtcactcacactacgacgcgcatacttcatcgactcctcgaagtg 325 |||||||||||||||||||||||| || ||||| || |||||||| |||||||||||||| Sbjct: 1388 cttgcggatgtcggcgtcactcacgctgcgacgggcgtacttcatggactcctcgaagtg 1329 Query: 326 ggcagccctgatctctgcaacctcatcaacctcgtcctcctccatcgcttcagggttgtc 385 |||||| ||||||| || | || || |||||||| |||||||| || || |||||||| Sbjct: 1328 agcagccttgatctcagcgatgtcgtctacctcgtcttcctccatagcctcggggttgtc 1269 Query: 386 cttcctccgcctctccctctcgatgtccttctcgatgttctccctgatggcatacttgca 445 ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1268 tttcctgcgcctctccctctcgatatccttctcgatgttctccctgatggcatacttgca 1209 Query: 446 agcacgctggcaaatttcagtgatatcagcaccgctgaacccttgggtgtacttggcaag 505 || |||||||| || || |||||||| ||||||||||| || |||||||| ||||| || Sbjct: 1208 cgcgcgctggcagatctctgtgatatctgcaccgctgaaaccctgggtgtatttggcgag 1149 Query: 506 agc 508 ||| Sbjct: 1148 agc 1146 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 108 atttaactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggcc 167 |||||||| ||||| |||||||| || ||||||| ||||||||||| || || |||||| Sbjct: 1537 atttaactgtataagtcatcatcgtcagctgctgctgcagcggatgcgaagggatcggcc 1478 Query: 168 gcagcggcag 177 ||||| |||| Sbjct: 1477 gcagcagcag 1468
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 287 bits (145), Expect = 2e-74 Identities = 264/304 (86%), Gaps = 6/304 (1%) Strand = Plus / Plus Query: 111 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 170 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 2834336 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 2834389 Query: 171 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 230 ||||| | | | ||||| | || |||||||||||||||| |||||| | ||||| ||| Sbjct: 2834390 gcggcggcgccggcgccagacgctggctggtcagcgaacctaaactcggtgccgaaccca 2834449 Query: 231 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 290 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2834450 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 2834509 Query: 291 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 350 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 2834510 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 2834569 Query: 351 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 410 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 2834570 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 2834629 Query: 411 tcct 414 |||| Sbjct: 2834630 tcct 2834633 Score = 97.6 bits (49), Expect = 3e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 420 atgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatcagcaccg 479 |||||||| |||||||| || ||||| ||||||||||| ||||| || ||||||||||| Sbjct: 2834734 atgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaatatcagcacca 2834793 Query: 480 ctgaacccttgggtgtacttggcaagagc 508 ||||| ||||||||||| ||||||||||| Sbjct: 2834794 ctgaaaccttgggtgtatttggcaagagc 2834822
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 287 bits (145), Expect = 2e-74 Identities = 264/304 (86%), Gaps = 6/304 (1%) Strand = Plus / Plus Query: 111 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 170 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 2834447 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 2834500 Query: 171 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 230 ||||| | | | ||||| | || |||||||||||||||| |||||| | ||||| ||| Sbjct: 2834501 gcggcggcgccggcgccagacgctggctggtcagcgaacctaaactcggtgccgaaccca 2834560 Query: 231 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 290 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2834561 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 2834620 Query: 291 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 350 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 2834621 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 2834680 Query: 351 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 410 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 2834681 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 2834740 Query: 411 tcct 414 |||| Sbjct: 2834741 tcct 2834744 Score = 97.6 bits (49), Expect = 3e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 420 atgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatcagcaccg 479 |||||||| |||||||| || ||||| ||||||||||| ||||| || ||||||||||| Sbjct: 2834845 atgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaatatcagcacca 2834904 Query: 480 ctgaacccttgggtgtacttggcaagagc 508 ||||| ||||||||||| ||||||||||| Sbjct: 2834905 ctgaaaccttgggtgtatttggcaagagc 2834933
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 287 bits (145), Expect = 2e-74 Identities = 264/304 (86%), Gaps = 6/304 (1%) Strand = Plus / Plus Query: 111 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 170 |||||||||||||||||||| || ||||| | |||||||||||| || ||||| | Sbjct: 106292 taactatataaatcatcatcgtcagctgcggcggcagcggatgcgaaggggtc------a 106345 Query: 171 gcggcagaggcagcgcccgcagccggctggtcagcgaaccggaactcgctcccgaatcca 230 ||||| | | | ||||| | || |||||||||||||||| |||||| | ||||| ||| Sbjct: 106346 gcggcggcgccggcgccagacgctggctggtcagcgaacctaaactcggtgccgaaccca 106405 Query: 231 cgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcaca 290 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106406 cgagactgctgcagagtctgggcgaaggcctggtacttgcggatgtcggcgtcactcaca 106465 Query: 291 ctacgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctca 350 || || || || ||||||||||||||||||||||| || ||| ||||||| |||| ||| Sbjct: 106466 ctccggcgtgcgtacttcatcgactcctcgaagtgagccgccttgatctcagcaatatca 106525 Query: 351 tcaacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatg 410 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 106526 tcaacctcgtcctcctccatggcttcagggttgtccttcctccgcttctccatctcgatg 106585 Query: 411 tcct 414 |||| Sbjct: 106586 tcct 106589 Score = 97.6 bits (49), Expect = 3e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 420 atgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatcagcaccg 479 |||||||| |||||||| || ||||| ||||||||||| ||||| || ||||||||||| Sbjct: 106690 atgttctctctgatggcgtatttgcatgcacgctggcagatttctgtaatatcagcacca 106749 Query: 480 ctgaacccttgggtgtacttggcaagagc 508 ||||| ||||||||||| ||||||||||| Sbjct: 106750 ctgaaaccttgggtgtatttggcaagagc 106778
>ref|NM_196705.1| Oryza sativa (japonica cultivar-group) putative endoplasmic reticulum membrane fusion protein (OSJNBa0046P18.14), mRNA Length = 2454 Score = 285 bits (144), Expect = 7e-74 Identities = 264/304 (86%) Strand = Plus / Minus Query: 205 cgaaccggaactcgctcccgaatccacgagactgctgcagcgtctgggcaaaggcctggt 264 |||| |||||||| || || || || ||||||||||||| ||||||||| || ||||||| Sbjct: 2368 cgaaacggaactcactgccaaacccgcgagactgctgcaacgtctgggcgaacgcctggt 2309 Query: 265 acttgcggatgtcggcgtcactcacactacgacgcgcatacttcatcgactcctcgaagt 324 |||||||||||||||| || || ||||| || ||||| |||||||||||||||||||||| Sbjct: 2308 acttgcggatgtcggcatcgctgacactgcggcgcgcgtacttcatcgactcctcgaagt 2249 Query: 325 gggcagccctgatctctgcaacctcatcaacctcgtcctcctccatcgcttcagggttgt 384 |||| ||| ||||||| |||| || || || || || |||||||||||||||||||| | Sbjct: 2248 gggctgccttgatctcagcaatgtcgtcgacttcatcttcctccatcgcttcagggttct 2189 Query: 385 ccttcctccgcctctccctctcgatgtccttctcgatgttctccctgatggcatacttgc 444 |||| ||||||||||||||||| |||||||||||||||||||| || || ||||| |||| Sbjct: 2188 ccttactccgcctctccctctcaatgtccttctcgatgttctctctaatcgcatatttgc 2129 Query: 445 aagcacgctggcaaatttcagtgatatcagcaccgctgaacccttgggtgtacttggcaa 504 | |||||||| || ||||| || ||||| ||||| ||||| ||||||||||||||||||| Sbjct: 2128 atgcacgctgacagatttctgtaatatctgcaccactgaagccttgggtgtacttggcaa 2069 Query: 505 gagc 508 |||| Sbjct: 2068 gagc 2065 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 111 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 170 |||||||||||||| |||||||| || | | |||||| || |||||||| || |||||| Sbjct: 2453 taactatataaatcgtcatcatcagcgacggcggcagcagacgcaaaaggatcagccgca 2394 Query: 171 gc 172 || Sbjct: 2393 gc 2392
>dbj|AK058908.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-E02, full insert sequence Length = 872 Score = 285 bits (144), Expect = 7e-74 Identities = 264/304 (86%) Strand = Plus / Minus Query: 205 cgaaccggaactcgctcccgaatccacgagactgctgcagcgtctgggcaaaggcctggt 264 |||| |||||||| || || || || ||||||||||||| ||||||||| || ||||||| Sbjct: 526 cgaaacggaactcactgccaaacccgcgagactgctgcaacgtctgggcgaacgcctggt 467 Query: 265 acttgcggatgtcggcgtcactcacactacgacgcgcatacttcatcgactcctcgaagt 324 |||||||||||||||| || || ||||| || ||||| |||||||||||||||||||||| Sbjct: 466 acttgcggatgtcggcatcgctgacactgcggcgcgcgtacttcatcgactcctcgaagt 407 Query: 325 gggcagccctgatctctgcaacctcatcaacctcgtcctcctccatcgcttcagggttgt 384 |||| ||| ||||||| |||| || || || || || |||||||||||||||||||| | Sbjct: 406 gggctgccttgatctcagcaatgtcgtcgacttcatcttcctccatcgcttcagggttct 347 Query: 385 ccttcctccgcctctccctctcgatgtccttctcgatgttctccctgatggcatacttgc 444 |||| ||||||||||||||||| |||||||||||||||||||| || || ||||| |||| Sbjct: 346 ccttactccgcctctccctctcaatgtccttctcgatgttctctctaatcgcatatttgc 287 Query: 445 aagcacgctggcaaatttcagtgatatcagcaccgctgaacccttgggtgtacttggcaa 504 | |||||||| || ||||| || ||||| ||||| ||||| ||||||||||||||||||| Sbjct: 286 atgcacgctgacagatttctgtaatatctgcaccactgaagccttgggtgtacttggcaa 227 Query: 505 gagc 508 |||| Sbjct: 226 gagc 223 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 111 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 170 |||||||||||||| |||||||| || | | |||||| || |||||||| || |||||| Sbjct: 611 taactatataaatcgtcatcatcagcgacggcggcagcagacgcaaaaggatcagccgca 552 Query: 171 gc 172 || Sbjct: 551 gc 550
>gb|BT017848.1| Zea mays clone EL01N0510F05.c mRNA sequence Length = 646 Score = 268 bits (135), Expect = 2e-68 Identities = 261/303 (86%) Strand = Plus / Minus Query: 206 gaaccggaactcgctcccgaatccacgagactgctgcagcgtctgggcaaaggcctggta 265 ||||||||||||||| || || || || |||||||| || |||||||| ||||||||||| Sbjct: 392 gaaccggaactcgctgccaaacccgcgggactgctggagtgtctgggcgaaggcctggta 333 Query: 266 cttgcggatgtcggcgtcactcacactacgacgcgcatacttcatcgactcctcgaagtg 325 |||||||||||||||||||||||| || ||||| || |||||||| |||||||||||||| Sbjct: 332 cttgcggatgtcggcgtcactcacgctgcgacgggcgtacttcatggactcctcgaagtg 273 Query: 326 ggcagccctgatctctgcaacctcatcaacctcgtcctcctccatcgcttcagggttgtc 385 |||||| ||||||| || | || || |||||||| |||||||| || || |||||||| Sbjct: 272 agcagccttgatctcagcgatgtcgtctacctcgtcttcctccatagcctcggggttgtc 213 Query: 386 cttcctccgcctctccctctcgatgtccttctcgatgttctccctgatggcatacttgca 445 || || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 212 tttgctgcgcctctccctctcgatatccttctcgatgttctccctgatggcatacttgca 153 Query: 446 agcacgctggcaaatttcagtgatatcagcaccgctgaacccttgggtgtacttggcaag 505 || |||||||| || || |||||||| | ||||||| || |||||||| ||||| || Sbjct: 152 cgcgcgctggcagatctctgtgatatctgggacgctgaaaccctgggtgtatttggcgag 93 Query: 506 agc 508 ||| Sbjct: 92 agc 90 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 108 atttaactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggcc 167 |||||||| ||||| |||||||| || ||||||| ||||||||||| || || ||| || Sbjct: 481 atttaactgtataagtcatcatcgtcagctgctgctgcagcggatgcgaagggatcgtcc 422 Query: 168 gcagcggcag 177 ||||| |||| Sbjct: 421 gcagcagcag 412
>gb|AY105040.1| Zea mays PCO097024 mRNA sequence Length = 2126 Score = 268 bits (135), Expect = 2e-68 Identities = 258/299 (86%) Strand = Plus / Minus Query: 210 cggaactcgctcccgaatccacgagactgctgcagcgtctgggcaaaggcctggtacttg 269 ||||||||||| ||||| ||||| |||||||||| ||||||||| || |||||||||||| Sbjct: 1832 cggaactcgctgccgaacccacgggactgctgcaacgtctgggcgaacgcctggtacttg 1773 Query: 270 cggatgtcggcgtcactcacactacgacgcgcatacttcatcgactcctcgaagtgggca 329 ||||| || || ||||| ||||| || || ||||||||||| |||||||||||||| || Sbjct: 1772 cggatatcagcatcactgacactgcgccgagcatacttcatagactcctcgaagtgagct 1713 Query: 330 gccctgatctctgcaacctcatcaacctcgtcctcctccatcgcttcagggttgtccttc 389 || ||||||| |||| ||| || || || || ||||||||||| ||||||||||||||| Sbjct: 1712 gctttgatctcggcaatctcgtccacttcatcttcctccatcgcctcagggttgtccttc 1653 Query: 390 ctccgcctctccctctcgatgtccttctcgatgttctccctgatggcatacttgcaagca 449 ||||||| |||||||| || |||||||| |||||||| ||||| ||||| ||||| ||| Sbjct: 1652 atccgcctttccctctcaatatccttctcaatgttctctctgattgcatatttgcacgca 1593 Query: 450 cgctggcaaatttcagtgatatcagcaccgctgaacccttgggtgtacttggcaagagc 508 |||||||||||||| |||||||| || || ||||||||||| |||||||| |||||||| Sbjct: 1592 cgctggcaaatttctgtgatatctgctccactgaacccttgtgtgtacttagcaagagc 1534
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 194 bits (98), Expect = 2e-46 Identities = 182/210 (86%) Strand = Plus / Minus Query: 205 cgaaccggaactcgctcccgaatccacgagactgctgcagcgtctgggcaaaggcctggt 264 |||| |||||||| || || || || ||||||||||||| ||||||||| || ||||||| Sbjct: 15401406 cgaaacggaactcactgccaaacccgcgagactgctgcaacgtctgggcgaacgcctggt 15401347 Query: 265 acttgcggatgtcggcgtcactcacactacgacgcgcatacttcatcgactcctcgaagt 324 |||||||||||||||| || || ||||| || ||||| |||||||||||||||||||||| Sbjct: 15401346 acttgcggatgtcggcatcgctgacactgcggcgcgcgtacttcatcgactcctcgaagt 15401287 Query: 325 gggcagccctgatctctgcaacctcatcaacctcgtcctcctccatcgcttcagggttgt 384 |||| ||| ||||||| |||| || || || || || |||||||||||||||||||| | Sbjct: 15401286 gggctgccttgatctcagcaatgtcgtcgacttcatcttcctccatcgcttcagggttct 15401227 Query: 385 ccttcctccgcctctccctctcgatgtcct 414 |||| ||||||||||||||||| ||||||| Sbjct: 15401226 ccttactccgcctctccctctcaatgtcct 15401197 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Minus Query: 412 ccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatat 471 |||||||||||||||| || || ||||| ||||| |||||||| || ||||| || |||| Sbjct: 15400851 ccttctcgatgttctctctaatcgcatatttgcatgcacgctgacagatttctgtaatat 15400792 Query: 472 cagcaccgctgaacccttgggtgtacttggcaagagc 508 | ||||| ||||| ||||||||||||||||||||||| Sbjct: 15400791 ctgcaccactgaagccttgggtgtacttggcaagagc 15400755 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 111 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 170 |||||||||||||| |||||||| || | | |||||| || |||||||| || |||||| Sbjct: 15401491 taactatataaatcgtcatcatcagcgacggcggcagcagacgcaaaaggatcagccgca 15401432 Query: 171 gc 172 || Sbjct: 15401431 gc 15401430
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 194 bits (98), Expect = 2e-46 Identities = 182/210 (86%) Strand = Plus / Minus Query: 205 cgaaccggaactcgctcccgaatccacgagactgctgcagcgtctgggcaaaggcctggt 264 |||| |||||||| || || || || ||||||||||||| ||||||||| || ||||||| Sbjct: 118769 cgaaacggaactcactgccaaacccgcgagactgctgcaacgtctgggcgaacgcctggt 118710 Query: 265 acttgcggatgtcggcgtcactcacactacgacgcgcatacttcatcgactcctcgaagt 324 |||||||||||||||| || || ||||| || ||||| |||||||||||||||||||||| Sbjct: 118709 acttgcggatgtcggcatcgctgacactgcggcgcgcgtacttcatcgactcctcgaagt 118650 Query: 325 gggcagccctgatctctgcaacctcatcaacctcgtcctcctccatcgcttcagggttgt 384 |||| ||| ||||||| |||| || || || || || |||||||||||||||||||| | Sbjct: 118649 gggctgccttgatctcagcaatgtcgtcgacttcatcttcctccatcgcttcagggttct 118590 Query: 385 ccttcctccgcctctccctctcgatgtcct 414 |||| ||||||||||||||||| ||||||| Sbjct: 118589 ccttactccgcctctccctctcaatgtcct 118560 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Minus Query: 412 ccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatat 471 |||||||||||||||| || || ||||| ||||| |||||||| || ||||| || |||| Sbjct: 118214 ccttctcgatgttctctctaatcgcatatttgcatgcacgctgacagatttctgtaatat 118155 Query: 472 cagcaccgctgaacccttgggtgtacttggcaagagc 508 | ||||| ||||| ||||||||||||||||||||||| Sbjct: 118154 ctgcaccactgaagccttgggtgtacttggcaagagc 118118 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 111 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 170 |||||||||||||| |||||||| || | | |||||| || |||||||| || |||||| Sbjct: 118854 taactatataaatcgtcatcatcagcgacggcggcagcagacgcaaaaggatcagccgca 118795 Query: 171 gc 172 || Sbjct: 118794 gc 118793
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 194 bits (98), Expect = 2e-46 Identities = 182/210 (86%) Strand = Plus / Minus Query: 205 cgaaccggaactcgctcccgaatccacgagactgctgcagcgtctgggcaaaggcctggt 264 |||| |||||||| || || || || ||||||||||||| ||||||||| || ||||||| Sbjct: 15409647 cgaaacggaactcactgccaaacccgcgagactgctgcaacgtctgggcgaacgcctggt 15409588 Query: 265 acttgcggatgtcggcgtcactcacactacgacgcgcatacttcatcgactcctcgaagt 324 |||||||||||||||| || || ||||| || ||||| |||||||||||||||||||||| Sbjct: 15409587 acttgcggatgtcggcatcgctgacactgcggcgcgcgtacttcatcgactcctcgaagt 15409528 Query: 325 gggcagccctgatctctgcaacctcatcaacctcgtcctcctccatcgcttcagggttgt 384 |||| ||| ||||||| |||| || || || || || |||||||||||||||||||| | Sbjct: 15409527 gggctgccttgatctcagcaatgtcgtcgacttcatcttcctccatcgcttcagggttct 15409468 Query: 385 ccttcctccgcctctccctctcgatgtcct 414 |||| ||||||||||||||||| ||||||| Sbjct: 15409467 ccttactccgcctctccctctcaatgtcct 15409438 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Minus Query: 412 ccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatat 471 |||||||||||||||| || || ||||| ||||| |||||||| || ||||| || |||| Sbjct: 15409092 ccttctcgatgttctctctaatcgcatatttgcatgcacgctgacagatttctgtaatat 15409033 Query: 472 cagcaccgctgaacccttgggtgtacttggcaagagc 508 | ||||| ||||| ||||||||||||||||||||||| Sbjct: 15409032 ctgcaccactgaagccttgggtgtacttggcaagagc 15408996 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Minus Query: 111 taactatataaatcatcatcatcggctgctgaggcagcggatgcaaaagggtcggccgca 170 |||||||||||||| |||||||| || | | |||||| || |||||||| || |||||| Sbjct: 15409732 taactatataaatcgtcatcatcagcgacggcggcagcagacgcaaaaggatcagccgca 15409673 Query: 171 gc 172 || Sbjct: 15409672 gc 15409671
>ref|NM_111819.3| Arabidopsis thaliana CDC48 (CELL DIVISION CYCLE 48); ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT3G09840 (CDC48) mRNA, complete cds Length = 2797 Score = 184 bits (93), Expect = 2e-43 Identities = 228/273 (83%) Strand = Plus / Minus Query: 233 agactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacact 292 ||||||||||| |||||| |||||||| |||||||| | |||||| || ||||||||||| Sbjct: 2461 agactgctgcaacgtctgagcaaaggcttggtacttcctgatgtctgcatcactcacact 2402 Query: 293 acgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatc 352 | |||||||||||||||||||||||| ||||| ||||| ||||||||| || ||||| Sbjct: 2401 cctacgcgcatacttcatcgactcctcaaagtgtgcagctttgatctctgatacttcatc 2342 Query: 353 aacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatgtc 412 || | || |||||||| || || ||||| || |||||| | ||||| | || ||||| Sbjct: 2341 cactccatcttcctccattgcctctgggttctcgctcctcctcttctccttttcaatgtc 2282 Query: 413 cttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatc 472 |||||| ||||| || |||||||| ||||||||||| | ||||||||| ||||||||||| Sbjct: 2281 cttctcaatgttttctctgatggcgtacttgcaagctctctggcaaatctcagtgatatc 2222 Query: 473 agcaccgctgaacccttgggtgtacttggcaag 505 |||||| ||||| || || ||||| || ||||| Sbjct: 2221 agcaccactgaaaccctgagtgtatttagcaag 2189
>gb|AY094434.1| Arabidopsis thaliana AT3g09840/F8A24_11 mRNA, complete cds Length = 2628 Score = 184 bits (93), Expect = 2e-43 Identities = 228/273 (83%) Strand = Plus / Minus Query: 233 agactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacact 292 ||||||||||| |||||| |||||||| |||||||| | |||||| || ||||||||||| Sbjct: 2417 agactgctgcaacgtctgagcaaaggcttggtacttcctgatgtctgcatcactcacact 2358 Query: 293 acgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatc 352 | |||||||||||||||||||||||| ||||| ||||| ||||||||| || ||||| Sbjct: 2357 cctacgcgcatacttcatcgactcctcaaagtgtgcagctttgatctctgatacttcatc 2298 Query: 353 aacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatgtc 412 || | || |||||||| || || ||||| || |||||| | ||||| | || ||||| Sbjct: 2297 cactccatcttcctccattgcctctgggttctcgctcctcctcttctccttttcaatgtc 2238 Query: 413 cttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatc 472 |||||| ||||| || |||||||| ||||||||||| | ||||||||| ||||||||||| Sbjct: 2237 cttctcaatgttttctctgatggcgtacttgcaagctctctggcaaatctcagtgatatc 2178 Query: 473 agcaccgctgaacccttgggtgtacttggcaag 505 |||||| ||||| || || ||||| || ||||| Sbjct: 2177 agcaccactgaaaccctgagtgtatttagcaag 2145
>gb|AY065076.1| Arabidopsis thaliana putative transitional endoplasmic reticulum ATPase (F8A24.11) mRNA, complete cds Length = 2730 Score = 184 bits (93), Expect = 2e-43 Identities = 228/273 (83%) Strand = Plus / Minus Query: 233 agactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacact 292 ||||||||||| |||||| |||||||| |||||||| | |||||| || ||||||||||| Sbjct: 2451 agactgctgcaacgtctgagcaaaggcttggtacttcctgatgtctgcatcactcacact 2392 Query: 293 acgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatc 352 | |||||||||||||||||||||||| ||||| ||||| ||||||||| || ||||| Sbjct: 2391 cctacgcgcatacttcatcgactcctcaaagtgtgcagctttgatctctgatacttcatc 2332 Query: 353 aacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatgtc 412 || | || |||||||| || || ||||| || |||||| | ||||| | || ||||| Sbjct: 2331 cactccatcttcctccattgcctctgggttctcgctcctcctcttctccttttcaatgtc 2272 Query: 413 cttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatc 472 |||||| ||||| || |||||||| ||||||||||| | ||||||||| ||||||||||| Sbjct: 2271 cttctcaatgttttctctgatggcgtacttgcaagctctctggcaaatctcagtgatatc 2212 Query: 473 agcaccgctgaacccttgggtgtacttggcaag 505 |||||| ||||| || || ||||| || ||||| Sbjct: 2211 agcaccactgaaaccctgagtgtatttagcaag 2179
>dbj|AK222120.1| Arabidopsis thaliana mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL22-93-G21 Length = 697 Score = 184 bits (93), Expect = 2e-43 Identities = 228/273 (83%) Strand = Plus / Minus Query: 233 agactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacact 292 ||||||||||| |||||| |||||||| |||||||| | |||||| || ||||||||||| Sbjct: 351 agactgctgcaacgtctgagcaaaggcttggtacttcctgatgtctgcatcactcacact 292 Query: 293 acgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatc 352 | |||||||||||||||||||||||| ||||| ||||| ||||||||| || ||||| Sbjct: 291 cctacgcgcatacttcatcgactcctcaaagtgtgcagctttgatctctgatacttcatc 232 Query: 353 aacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatgtc 412 || | || |||||||| || || ||||| || |||||| | ||||| | || ||||| Sbjct: 231 cactccatcttcctccattgcctctgggttctcgctcctcctcttctccttttcaatgtc 172 Query: 413 cttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatc 472 |||||| ||||| || |||||||| ||||||||||| | ||||||||| ||||||||||| Sbjct: 171 cttctcaatgttttctctgatggcgtacttgcaagctctctggcaaatctcagtgatatc 112 Query: 473 agcaccgctgaacccttgggtgtacttggcaag 505 |||||| ||||| || || ||||| || ||||| Sbjct: 111 agcaccactgaaaccctgagtgtatttagcaag 79
>gb|U37587.1|ATU37587 Arabidopsis thaliana cell division cycle protein (CDC48) mRNA, complete cds Length = 2638 Score = 184 bits (93), Expect = 2e-43 Identities = 228/273 (83%) Strand = Plus / Minus Query: 233 agactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacact 292 ||||||||||| |||||| |||||||| |||||||| | |||||| || ||||||||||| Sbjct: 2400 agactgctgcaacgtctgagcaaaggcttggtacttcctgatgtctgcatcactcacact 2341 Query: 293 acgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatc 352 | |||||||||||||||||||||||| ||||| ||||| ||||||||| || ||||| Sbjct: 2340 cctacgcgcatacttcatcgactcctcaaagtgtgcagctttgatctctgatacttcatc 2281 Query: 353 aacctcgtcctcctccatcgcttcagggttgtccttcctccgcctctccctctcgatgtc 412 || | || |||||||| || || ||||| || |||||| | ||||| | || ||||| Sbjct: 2280 cactccatcttcctccattgcctctgggttctcgctcctcctcttctccttttcaatgtc 2221 Query: 413 cttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatc 472 |||||| ||||| || |||||||| ||||||||||| | ||||||||| ||||||||||| Sbjct: 2220 cttctcaatgttttctctgatggcgtacttgcaagctctctggcaaatctcagtgatatc 2161 Query: 473 agcaccgctgaacccttgggtgtacttggcaag 505 |||||| ||||| || || ||||| || ||||| Sbjct: 2160 agcaccactgaaaccctgagtgtatttagcaag 2128
>ref|NM_115183.2| Arabidopsis thaliana ATP binding / hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT3G53230 mRNA, complete cds Length = 2672 Score = 117 bits (59), Expect = 4e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 395 cctctccctctcgatgtccttctcgatgttctccctgatggcatacttgcaagcacgctg 454 ||||||| |||| || |||||||||||||| || ||||| ||||||||||||| |||||| Sbjct: 2186 cctctccttctcaatatccttctcgatgttttctctgatcgcatacttgcaagaacgctg 2127 Query: 455 gcaaatttcagtgatatcagcaccgctgaacccttgggtgtacttggcaagagcc 509 |||||| || ||||| || ||||| ||||| |||||||||||||| ||||||||| Sbjct: 2126 gcaaatctctgtgatgtccgcaccactgaagccttgggtgtacttagcaagagcc 2072
>emb|AL132958.1|ATT4D2 Arabidopsis thaliana DNA chromosome 3, BAC clone T4D2 Length = 92611 Score = 117 bits (59), Expect = 4e-23 Identities = 101/115 (87%) Strand = Plus / Minus Query: 395 cctctccctctcgatgtccttctcgatgttctccctgatggcatacttgcaagcacgctg 454 ||||||| |||| || |||||||||||||| || ||||| ||||||||||||| |||||| Sbjct: 50254 cctctccttctcaatatccttctcgatgttttctctgatcgcatacttgcaagaacgctg 50195 Query: 455 gcaaatttcagtgatatcagcaccgctgaacccttgggtgtacttggcaagagcc 509 |||||| || ||||| || ||||| ||||| |||||||||||||| ||||||||| Sbjct: 50194 gcaaatctctgtgatgtccgcaccactgaagccttgggtgtacttagcaagagcc 50140
>gb|AC015985.10|ATAC015985 Arabidopsis thaliana chromosome III BAC F8A24 genomic sequence, complete sequence Length = 72902 Score = 115 bits (58), Expect = 1e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 233 agactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacact 292 ||||||||||| |||||| |||||||| |||||||| | |||||| || ||||||||||| Sbjct: 44013 agactgctgcaacgtctgagcaaaggcttggtacttcctgatgtctgcatcactcacact 44072 Query: 293 acgacgcgcatacttcatcgactcctcgaagtgggcagccctgatctctg 342 | |||||||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 44073 cctacgcgcatacttcatcgactcctcaaagtgtgcagctttgatctctg 44122 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 412 ccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatat 471 ||||||| ||||| || |||||||| ||||||||||| | ||||||||| |||||||||| Sbjct: 44281 ccttctcaatgttttctctgatggcgtacttgcaagctctctggcaaatctcagtgatat 44340 Query: 472 cagcaccgctgaacccttgggtgtacttggcaag 505 ||||||| ||||| || || ||||| || ||||| Sbjct: 44341 cagcaccactgaaaccctgagtgtatttagcaag 44374
>gb|AY456394.1| 'Chlorella' ellipsoidea cell division cycle protein 48 mRNA, partial cds Length = 2033 Score = 113 bits (57), Expect = 6e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 236 ctgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacg 295 |||||||||||||||||||||||||||||||||||||||||| ||||| || ||| || Sbjct: 1709 ctgctgcagcgtctgggcaaaggcctggtacttgcggatgtctgcgtcgctgacagagcg 1650 Query: 296 acgcgcatacttcatcgactcctcgaagtgggc 328 ||| ||||||||||| | ||||||||||||||| Sbjct: 1649 acgggcatacttcatggcctcctcgaagtgggc 1617 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 392 ccgcctctccctctcgatgtccttctcgatgttctccctgatggcatacttgca 445 |||| |||||||||| ||||||||||| ||||| || |||||||| || ||||| Sbjct: 1556 ccgcttctccctctcaatgtccttctcaatgttttctctgatggcgtatttgca 1503
>gb|AY232675.1| Mirabilis jalapa CDC48-like protein mRNA, partial cds Length = 669 Score = 111 bits (56), Expect = 2e-21 Identities = 164/200 (82%) Strand = Plus / Minus Query: 306 ttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatcaacctcgtcctcc 365 ||||| |||||||| ||||| ||||| | || || |||||||| || || | |||||| Sbjct: 464 ttcatggactcctcaaagtgagcagcttttatttcagcaacctcgtcctccacatcctcc 405 Query: 366 tccatcgcttcagggttgtccttcctccgcctctccctctcgatgtccttctcgatgttc 425 |||||||| ||||| || || | || | | |||| ||||| || |||||||| |||||| Sbjct: 404 tccatcgcctcaggattctcacttcttctcttctctctctcaatatccttctcaatgttc 345 Query: 426 tccctgatggcatacttgcaagcacgctggcaaatttcagtgatatcagcaccgctgaac 485 |||||||||||||| ||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 344 tccctgatggcatatttgcaagcacgttggcatatttcggtgatatctgcaccgctgaaa 285 Query: 486 ccttgggtgtacttggcaag 505 || || ||||| || ||||| Sbjct: 284 ccctgagtgtatttagcaag 265
>gb|DQ359725.1| Glycine max plamsma membrane-associated AAA-ATPase mRNA, complete cds Length = 2628 Score = 85.7 bits (43), Expect = 1e-13 Identities = 201/253 (79%), Gaps = 3/253 (1%) Strand = Plus / Minus Query: 246 gtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacgacgcgcatac 305 ||||| ||||| ||||| |||||||| || || || ||||| ||||| | || ||| || Sbjct: 2345 gtctgagcaaatgcctgatacttgcgaatatcagcatcactaacactcctccgtgcaaac 2286 Query: 306 ttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatcaacctcg---tcc 362 ||||| |||||||| || || |||||| ||||||| ||||| || || | || || Sbjct: 2285 ttcattgactcctcaaaatgagcagccttgatctccgcaacttcgtcgtcgacggtatct 2226 Query: 363 tcctccatcgcttcagggttgtccttcctccgcctctccctctcgatgtccttctcgatg 422 || ||||| || |||||||| ||| | ||| |||||| | ||| ||||||||||| ||| Sbjct: 2225 tcatccatggcctcagggttttccctactcttcctctctcgctcaatgtccttctctatg 2166 Query: 423 ttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatcagcaccgctg 482 || || || |||||||| ||||| || |||||||| ||||| || ||||||||||| ||| Sbjct: 2165 ttttctcttatggcatatttgcatgctcgctggcatatttctgtaatatcagcaccactg 2106 Query: 483 aacccttgggtgt 495 |||||||| |||| Sbjct: 2105 aacccttgagtgt 2093
>gb|U20213.1|GMU20213 Glycine max valosin-containing protein mRNA, complete cds Length = 2654 Score = 85.7 bits (43), Expect = 1e-13 Identities = 201/253 (79%), Gaps = 3/253 (1%) Strand = Plus / Minus Query: 246 gtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacgacgcgcatac 305 ||||| ||||| ||||| |||||||| || || || ||||| ||||| | || ||| || Sbjct: 2365 gtctgagcaaatgcctgatacttgcgaatatcagcatcactaacactcctccgtgcaaac 2306 Query: 306 ttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatcaacctcg---tcc 362 ||||| |||||||| || || |||||| ||||||| ||||| || || | || || Sbjct: 2305 ttcattgactcctcaaaatgagcagccttgatctccgcaacttcgtcgtcgacggtatct 2246 Query: 363 tcctccatcgcttcagggttgtccttcctccgcctctccctctcgatgtccttctcgatg 422 || ||||| || |||||||| ||| | ||| |||||| | ||| ||||||||||| ||| Sbjct: 2245 tcatccatggcctcagggttttccctactcttcctctctcgctcaatgtccttctctatg 2186 Query: 423 ttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatatcagcaccgctg 482 || || || |||||||| ||||| || |||||||| ||||| || ||||||||||| ||| Sbjct: 2185 ttttctcttatggcatatttgcatgctcgctggcatatttctgtaatatcagcaccactg 2126 Query: 483 aacccttgggtgt 495 |||||||| |||| Sbjct: 2125 aacccttgagtgt 2113
>ref|NM_120412.2| Arabidopsis thaliana ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/ nucleotide binding AT5G03340 mRNA, complete cds Length = 2671 Score = 73.8 bits (37), Expect = 5e-10 Identities = 97/117 (82%) Strand = Plus / Minus Query: 237 tgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacga 296 |||||||||||||| ||||| || ||||||||||| || || || ||||||||||| | Sbjct: 2398 tgctgcagcgtctgagcaaaagcttggtacttgcgaatatcagcatcactcacacttctc 2339 Query: 297 cgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatca 353 | ||||| ||||||||||| ||||| || ||||| || ||||||| ||| |||||| Sbjct: 2338 cttgcatatttcatcgactcttcgaaatgagcagctctaatctctgaaacttcatca 2282 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 411 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 470 ||||| |||||||| || |||||||| ||||||||||| | |||||| || || |||||| Sbjct: 2221 tccttttcgatgttttctctgatggcgtacttgcaagctctctggcagatctcggtgata 2162 Query: 471 tcagcaccgctgaacccttgggtgtactt 499 |||||||| ||||| || || |||||||| Sbjct: 2161 tcagcaccactgaatccctgagtgtactt 2133
>emb|AL162751.1|ATF12E4 Arabidopsis thaliana DNA chromosome 5, BAC clone F12E4 (ESSA project) Length = 121552 Score = 73.8 bits (37), Expect = 5e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 237 tgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacga 296 |||||||||||||| ||||| || ||||||||||| || || || ||||||||||| | Sbjct: 24032 tgctgcagcgtctgagcaaaagcttggtacttgcgaatatcagcatcactcacacttctc 24091 Query: 297 cgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatca 353 | ||||| ||||||||||| ||||| || ||||| || ||||||| ||| |||||| Sbjct: 24092 cttgcatatttcatcgactcttcgaaatgagcagctctaatctctgaaacttcatca 24148 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 412 ccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgatat 471 |||| |||||||| || |||||||| ||||||||||| | |||||| || || ||||||| Sbjct: 24316 ccttttcgatgttttctctgatggcgtacttgcaagctctctggcagatctcggtgatat 24375 Query: 472 cagcaccgctgaacccttgggtgtactt 499 ||||||| ||||| || || |||||||| Sbjct: 24376 cagcaccactgaatccctgagtgtactt 24403
>gb|BT006485.1| Arabidopsis thaliana At5g03340 gene, complete cds Length = 2433 Score = 73.8 bits (37), Expect = 5e-10 Identities = 97/117 (82%) Strand = Plus / Minus Query: 237 tgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacga 296 |||||||||||||| ||||| || ||||||||||| || || || ||||||||||| | Sbjct: 2303 tgctgcagcgtctgagcaaaagcttggtacttgcgaatatcagcatcactcacacttctc 2244 Query: 297 cgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatca 353 | ||||| ||||||||||| ||||| || ||||| || ||||||| ||| |||||| Sbjct: 2243 cttgcatatttcatcgactcttcgaaatgagcagctctaatctctgaaacttcatca 2187 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 411 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 470 ||||| |||||||| || |||||||| ||||||||||| | |||||| || || |||||| Sbjct: 2126 tccttttcgatgttttctctgatggcgtacttgcaagctctctggcagatctcggtgata 2067 Query: 471 tcagcaccgctgaacccttgggtgtactt 499 |||||||| ||||| || || |||||||| Sbjct: 2066 tcagcaccactgaatccctgagtgtactt 2038
>dbj|AK118571.1| Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL19-80-L03 Length = 2671 Score = 73.8 bits (37), Expect = 5e-10 Identities = 97/117 (82%) Strand = Plus / Minus Query: 237 tgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacga 296 |||||||||||||| ||||| || ||||||||||| || || || ||||||||||| | Sbjct: 2398 tgctgcagcgtctgagcaaaagcttggtacttgcgaatatcagcatcactcacacttctc 2339 Query: 297 cgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatca 353 | ||||| ||||||||||| ||||| || ||||| || ||||||| ||| |||||| Sbjct: 2338 cttgcatatttcatcgactcttcgaaatgagcagctctaatctctgaaacttcatca 2282 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 411 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 470 ||||| |||||||| || |||||||| ||||||||||| | |||||| || || |||||| Sbjct: 2221 tccttttcgatgttttctctgatggcgtacttgcaagctctctggcagatctcggtgata 2162 Query: 471 tcagcaccgctgaacccttgggtgtactt 499 |||||||| ||||| || || |||||||| Sbjct: 2161 tcagcaccactgaatccctgagtgtactt 2133
>dbj|AK117125.1| Arabidopsis thaliana At5g03340 mRNA for putative transitional endoplasmic reticulum ATPase, complete cds, clone: RAFL16-66-D01 Length = 2664 Score = 73.8 bits (37), Expect = 5e-10 Identities = 97/117 (82%) Strand = Plus / Minus Query: 237 tgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacga 296 |||||||||||||| ||||| || ||||||||||| || || || ||||||||||| | Sbjct: 2391 tgctgcagcgtctgagcaaaagcttggtacttgcgaatatcagcatcactcacacttctc 2332 Query: 297 cgcgcatacttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatca 353 | ||||| ||||||||||| ||||| || ||||| || ||||||| ||| |||||| Sbjct: 2331 cttgcatatttcatcgactcttcgaaatgagcagctctaatctctgaaacttcatca 2275 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 411 tccttctcgatgttctccctgatggcatacttgcaagcacgctggcaaatttcagtgata 470 ||||| |||||||| || |||||||| ||||||||||| | |||||| || || |||||| Sbjct: 2214 tccttttcgatgttttctctgatggcgtacttgcaagctctctggcagatctcggtgata 2155 Query: 471 tcagcaccgctgaacccttgggtgtactt 499 |||||||| ||||| || || |||||||| Sbjct: 2154 tcagcaccactgaatccctgagtgtactt 2126
>emb|Y09396.1|CACAFP C.annuum mRNA for CDC48p-like protein Length = 2682 Score = 71.9 bits (36), Expect = 2e-09 Identities = 182/230 (79%), Gaps = 3/230 (1%) Strand = Plus / Minus Query: 246 gtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacgacgcgcatac 305 ||||| ||||| |||||||| ||||| || || || ||||| |||||||| || |||||| Sbjct: 2327 gtctgagcaaatgcctggtatttgcgtatatcagcatcactgacactacgtcgtgcatac 2268 Query: 306 ttcatcgactcctcgaagtgggcagccctgatctctgcaacctcatcaacctcgtcctcc 365 ||||| || |||||||| || || | | ||||||||| || ||||| || || || ||| Sbjct: 2267 ttcatagattcctcgaaatgagcgggcttgatctctggtacttcatcgacatcttcatcc 2208 Query: 366 tccatcgcttcagggttgtccttcctccgcctctccctctcgatgtccttctcgatgttc 425 || | |||||||| |||| || | | ||||||| || ||||| ||||| |||||| Sbjct: 2207 ---attgaatcagggttttcctgtcttctcttctccctttctatgtctttctctatgttc 2151 Query: 426 tccctgatggcatacttgcaagcacgctggcaaatttcagtgatatcagc 475 ||||| |||||||| ||||| || || || ||||| ||||||| |||||| Sbjct: 2150 tccctaatggcatatttgcaggctcgttgacaaatctcagtgacatcagc 2101
>gb|BT012783.1| Lycopersicon esculentum clone 113773R, mRNA sequence Length = 2684 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 246 gtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacactacgacgcgcatac 305 ||||| ||||| |||||||| || || || ||||| ||||||||||| || || |||||| Sbjct: 2340 gtctgagcaaatgcctggtatttacgaatatcggcatcactcacacttcgtcgtgcatac 2281 Query: 306 ttcatcgactcctcgaagtgggcagccctgatctctg 342 ||||| |||||||| || || |||| | ||||||||| Sbjct: 2280 ttcatggactcctcaaaatgagcaggcttgatctctg 2244
>gb|BT014585.1| Lycopersicon esculentum clone 134043F, mRNA sequence Length = 2708 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 233 agactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcggcgtcactcacact 292 ||||||||| | ||||| ||||| |||||||| ||||| || || || || || ||||| Sbjct: 2375 agactgctgtaatgtctgagcaaatgcctggtatttgcgtatatcagcatcgctgacact 2316 Query: 293 acgacgcgcatacttcatcgactcctcgaagtg 325 ||||| ||||||||||| |||||||| ||||| Sbjct: 2315 ccgacgggcatacttcatagactcctcaaagtg 2283 Score = 54.0 bits (27), Expect = 5e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 397 tctccctctcgatgtccttctcgatgttctccctgatggcatacttgcaagcacgctggc 456 ||||||| || || || ||||| ||||||||||| |||||||| ||||| | || || | Sbjct: 2214 tctccctttctatatctttctctatgttctcccttatggcatatttgcaggatcgttgac 2155 Query: 457 aaatttcagtgatatcagc 475 |||| |||||||||||||| Sbjct: 2154 aaatctcagtgatatcagc 2136
>emb|BX028305.1|CNS08U05 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA42BC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1003 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 222 ccgaatccacgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcg 278 |||||||||||||| ||||||||||| |||||||| | |||||||||||||||| Sbjct: 831 ccgaatccacgagattgctgcagcgtttgggcaaacatttcgtacttgcggatgtcg 887
>emb|BX027063.1|CNS08T1N Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA40CD02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1007 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 222 ccgaatccacgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcg 278 |||||||||||||| ||||||||||| |||||||| | |||||||||||||||| Sbjct: 838 ccgaatccacgagattgctgcagcgtttgggcaaacatttcgtacttgcggatgtcg 894
>ref|XM_315644.2| Anopheles gambiae str. PEST ENSANGP00000022801 (ENSANGG00000019258), partial mRNA Length = 2559 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 222 ccgaatccacgagactgctgcagcgtctgggcaaaggcctggtacttgcggatgtcg 278 |||||||||||||| ||||||||||| |||||||| | |||||||||||||||| Sbjct: 2300 ccgaatccacgagattgctgcagcgtttgggcaaacatttcgtacttgcggatgtcg 2244
>ref|XM_752342.1| Ustilago maydis 521 hypothetical protein (UM01288.1) partial mRNA Length = 2853 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 355 cctcgtcctcctccatcgcttcag 378 |||||||||||||||||||||||| Sbjct: 1975 cctcgtcctcctccatcgcttcag 1952
>gb|AC103566.1| Caenorhabditis briggsae cosmid CB024E07, complete sequence Length = 79224 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 222 ccgaatccacgagactgctgcagcgtctgggc 253 ||||| |||||||||||||| ||||||||||| Sbjct: 63413 ccgaagccacgagactgctggagcgtctgggc 63444
>ref|XM_774925.1| PREDICTED: Strongylocentrotus purpuratus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 1 (LOC575609), mRNA Length = 3597 Score = 46.1 bits (23), Expect = 0.11 Identities = 56/67 (83%) Strand = Plus / Minus Query: 440 cttgcaagcacgctggcaaatttcagtgatatcagcaccgctgaacccttgggtgtactt 499 |||||| ||||||||||| || || || | ||||||||| ||||| || |||||| ||| Sbjct: 1917 cttgcaggcacgctggcagatctctgtcagatcagcaccactgaatccctgggtgacctt 1858 Query: 500 ggcaaga 506 ||||||| Sbjct: 1857 ggcaaga 1851
>ref|XM_796615.1| PREDICTED: Strongylocentrotus purpuratus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP), transcript variant 2 (LOC575609), mRNA Length = 3621 Score = 46.1 bits (23), Expect = 0.11 Identities = 56/67 (83%) Strand = Plus / Minus Query: 440 cttgcaagcacgctggcaaatttcagtgatatcagcaccgctgaacccttgggtgtactt 499 |||||| ||||||||||| || || || | ||||||||| ||||| || |||||| ||| Sbjct: 1917 cttgcaggcacgctggcagatctctgtcagatcagcaccactgaatccctgggtgacctt 1858 Query: 500 ggcaaga 506 ||||||| Sbjct: 1857 ggcaaga 1851
>ref|NM_165726.1| Drosophila melanogaster TER94 CG2331-RB, transcript variant B (TER94), mRNA Length = 1458 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 222 ccgaatccacgagactgctgcagcgtctgggcaaa 256 ||||||||||| |||||||||| ||||||||||| Sbjct: 862 ccgaatccacgggactgctgcaaagtctgggcaaa 828
>ref|NM_058021.3| Drosophila melanogaster TER94 CG2331-RA, transcript variant A (TER94), mRNA Length = 3018 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 222 ccgaatccacgagactgctgcagcgtctgggcaaa 256 ||||||||||| |||||||||| ||||||||||| Sbjct: 2426 ccgaatccacgggactgctgcaaagtctgggcaaa 2392
>gb|AC007414.6| Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone BACR06J01, complete sequence Length = 172904 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 222 ccgaatccacgagactgctgcagcgtctgggcaaa 256 ||||||||||| |||||||||| ||||||||||| Sbjct: 47748 ccgaatccacgggactgctgcaaagtctgggcaaa 47714
>gb|AC007413.5|AC007413 Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone BACR01L01, complete sequence Length = 160301 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 222 ccgaatccacgagactgctgcagcgtctgggcaaa 256 ||||||||||| |||||||||| ||||||||||| Sbjct: 159195 ccgaatccacgggactgctgcaaagtctgggcaaa 159161
>gb|AY190939.1| Drosophila erecta clone DERF01_42_I03 (D1420) genomic sequence Length = 45909 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 222 ccgaatccacgagactgctgcagcgtctgggcaaa 256 ||||||||||| |||||||||| ||||||||||| Sbjct: 39169 ccgaatccacgggactgctgcaaagtctgggcaaa 39135
>gb|AE003831.3| Drosophila melanogaster chromosome 2R, section 19 of 73 of the complete sequence Length = 275390 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 222 ccgaatccacgagactgctgcagcgtctgggcaaa 256 ||||||||||| |||||||||| ||||||||||| Sbjct: 145041 ccgaatccacgggactgctgcaaagtctgggcaaa 145007
>gb|BT001521.1| Drosophila melanogaster LP12034 full insert cDNA Length = 1473 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 222 ccgaatccacgagactgctgcagcgtctgggcaaa 256 ||||||||||| |||||||||| ||||||||||| Sbjct: 863 ccgaatccacgggactgctgcaaagtctgggcaaa 829
>gb|AF047037.1|AF047037 Drosophila melanogaster transitional endoplasmic reticulum ATPase TER94 mRNA, complete cds Length = 2550 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 222 ccgaatccacgagactgctgcagcgtctgggcaaa 256 ||||||||||| |||||||||| ||||||||||| Sbjct: 2367 ccgaatccacgggactgctgcaaagtctgggcaaa 2333
>gb|AF132553.1| Drosophila melanogaster BcDNA.GM02885 (BcDNA.GM02885) mRNA, complete cds Length = 3018 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 222 ccgaatccacgagactgctgcagcgtctgggcaaa 256 ||||||||||| |||||||||| ||||||||||| Sbjct: 2410 ccgaatccacgggactgctgcaaagtctgggcaaa 2376
>ref|NM_001031502.1| Gallus gallus DnaJ (Hsp40) homolog, subfamily C, member 7 (DNAJC7), mRNA Length = 5522 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 ggcagaggcagcgcccgcagcc 194 |||||||||||||||||||||| Sbjct: 4912 ggcagaggcagcgcccgcagcc 4891
>emb|AJ851525.1| Gallus gallus mRNA for hypothetical protein, clone 4m5 Length = 5522 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 ggcagaggcagcgcccgcagcc 194 |||||||||||||||||||||| Sbjct: 4912 ggcagaggcagcgcccgcagcc 4891
>emb|AJ404652.1|GGA404652 Gallus gallus mRNA for chicken secreted frizzled related protein 1 (CSFRP1 gene) Length = 3065 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 6 acaacgattaactgtgcatcacagta 31 ||||||||||||| |||||||||||| Sbjct: 2220 acaacgattaactctgcatcacagta 2195
>ref|NM_204553.1| Gallus gallus secreted frizzled-related protein 1 (SFRP1), mRNA Length = 3065 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 6 acaacgattaactgtgcatcacagta 31 ||||||||||||| |||||||||||| Sbjct: 2220 acaacgattaactctgcatcacagta 2195
>emb|CR387484.1| Gallus gallus finished cDNA, clone ChEST490i16 Length = 872 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 ggcagaggcagcgcccgcagcc 194 |||||||||||||||||||||| Sbjct: 519 ggcagaggcagcgcccgcagcc 498
>ref|XM_429532.1| PREDICTED: Gallus gallus LOC417817 (LOC417817), mRNA Length = 1393 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 389 cctccgcctctccctctcgatgtcc 413 ||||||||||||||||||| ||||| Sbjct: 516 cctccgcctctccctctcgctgtcc 492
>ref|XM_329540.1| Neurospora crassa OR74A hypothetical protein (NCU08496.1) partial mRNA Length = 3873 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 cttcctccgcctctccctctc 406 ||||||||||||||||||||| Sbjct: 173 cttcctccgcctctccctctc 193
>ref|XM_958332.1| Neurospora crassa OR74A hypothetical protein (NCU08496.1) partial mRNA Length = 3873 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 cttcctccgcctctccctctc 406 ||||||||||||||||||||| Sbjct: 173 cttcctccgcctctccctctc 193
>gb|BC007562.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone IMAGE:2988964), partial cds Length = 2537 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 cttgcaagcacgctggcaaat 460 ||||||||||||||||||||| Sbjct: 1603 cttgcaagcacgctggcaaat 1583
>gb|BC023563.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone IMAGE:4422977), **** WARNING: chimeric clone **** Length = 5159 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 cttgcaagcacgctggcaaat 460 ||||||||||||||||||||| Sbjct: 4221 cttgcaagcacgctggcaaat 4201
>gb|BC021055.1| Homo sapiens cDNA clone IMAGE:2822943, **** WARNING: chimeric clone **** Length = 4821 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 cttgcaagcacgctggcaaat 460 ||||||||||||||||||||| Sbjct: 2384 cttgcaagcacgctggcaaat 2364
>ref|NM_007126.2| Homo sapiens valosin-containing protein (VCP), mRNA Length = 3198 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 cttgcaagcacgctggcaaat 460 ||||||||||||||||||||| Sbjct: 2300 cttgcaagcacgctggcaaat 2280
>gb|BC096751.1| Homo sapiens cDNA clone IMAGE:5296598, containing frame-shift errors Length = 2894 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 cttgcaagcacgctggcaaat 460 ||||||||||||||||||||| Sbjct: 2336 cttgcaagcacgctggcaaat 2316
>emb|AL390066.5| Human DNA sequence from clone RP5-1086K13 on chromosome 1 Contains the 5' end of a novel gene, the 3' end of a novel gene, the 3' end of the CD58 gene for CD58 antigen (lymphocyte function-associated antigen 3), a novel gene and the 3' end of a nucleosome assembly protein 1-like 4 (NAP1L4) pseudogene, complete sequence Length = 103611 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 374 ttcagggttgtccttcctccg 394 ||||||||||||||||||||| Sbjct: 34751 ttcagggttgtccttcctccg 34731
>ref|XM_789562.1| PREDICTED: Strongylocentrotus purpuratus similar to CG14788-PA (LOC589934), mRNA Length = 2091 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 347 ctcatcaacctcgtcctcctccatc 371 |||||||||||| |||||||||||| Sbjct: 1086 ctcatcaacctcatcctcctccatc 1062
>emb|AL353795.13| Human DNA sequence from clone RP11-182N22 on chromosome 9 Contains a novel gene, the VCP gene for valosin-containing protein, the FANCG gene for Fanconi anemia, complementation group G (FAG, XRCC9), the gene for phosphatidylinositol glycan class O (PIGO), a novel gene, the STOML2 gene for stomatin (EPB72)-like 2 (SLP-2), a novel gene (KIAA1539) (FLJ11560), a zinc finger protein pseudogene, the 5' end of the UNC13 gene for unc-13-like (C. elegans) (hmunc13) and nine CpG islands, complete sequence Length = 195102 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 cttgcaagcacgctggcaaat 460 ||||||||||||||||||||| Sbjct: 28853 cttgcaagcacgctggcaaat 28873
>gb|AY268943.1| Tetrahymena thermophila strain Cu428 Brg1p (BRG1) mRNA, complete cds Length = 4304 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 109 tttaactatataaatcatcatcatc 133 ||||||| ||||||||||||||||| Sbjct: 3810 tttaactctataaatcatcatcatc 3786
>emb|BX842594.1| Neurospora crassa DNA linkage group II BAC clone B18P7 Length = 95637 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 cttcctccgcctctccctctc 406 ||||||||||||||||||||| Sbjct: 11169 cttcctccgcctctccctctc 11189
>emb|AL356834.1|NCB11B22 Neurospora crassa DNA linkage group II BAC clone B11B22 Length = 73803 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 cttcctccgcctctccctctc 406 ||||||||||||||||||||| Sbjct: 32871 cttcctccgcctctccctctc 32851
>emb|AL137377.1|HSM802065 Homo sapiens mRNA; cDNA DKFZp434K0126 (from clone DKFZp434K0126) Length = 1862 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 cttgcaagcacgctggcaaat 460 ||||||||||||||||||||| Sbjct: 963 cttgcaagcacgctggcaaat 943
>emb|CR606334.1| full-length cDNA clone CS0DM007YL14 of Fetal liver of Homo sapiens (human) Length = 2858 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 cttgcaagcacgctggcaaat 460 ||||||||||||||||||||| Sbjct: 2331 cttgcaagcacgctggcaaat 2311
>gb|AC004472.1|AC004472 Homo sapiens chromosome 9, P1 clone 11659, complete sequence Length = 86765 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 cttgcaagcacgctggcaaat 460 ||||||||||||||||||||| Sbjct: 39043 cttgcaagcacgctggcaaat 39063
>gb|AF313486.1|AF313485S2 Homo sapiens tissue-type kidney valosin-containing protein mRNA, partial cds Length = 1303 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 cttgcaagcacgctggcaaat 460 ||||||||||||||||||||| Sbjct: 973 cttgcaagcacgctggcaaat 953
>ref|XM_316139.2| Anopheles gambiae str. PEST ENSANGP00000020353 (ENSANGG00000017864), partial mRNA Length = 4518 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 189 gcagccggctggtcagcgaaccgga 213 |||||||| |||||||||||||||| Sbjct: 4369 gcagccggttggtcagcgaaccgga 4345
>gb|AF100752.1|AF100752 Homo sapiens transitional endoplasmic reticulum ATPase mRNA, complete cds Length = 2887 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 cttgcaagcacgctggcaaat 460 ||||||||||||||||||||| Sbjct: 2300 cttgcaagcacgctggcaaat 2280
>gb|BC110913.1| Homo sapiens valosin-containing protein, mRNA (cDNA clone MGC:131997 IMAGE:6502535), complete cds Length = 3212 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 cttgcaagcacgctggcaaat 460 ||||||||||||||||||||| Sbjct: 2287 cttgcaagcacgctggcaaat 2267
>gb|AC115011.27| Mus musculus chromosome 1, clone RP24-192A11, complete sequence Length = 173802 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 gcagcggcagaggcagcgcc 187 |||||||||||||||||||| Sbjct: 133711 gcagcggcagaggcagcgcc 133692
>ref|XM_510327.1| PREDICTED: Pan troglodytes LOC453353 (LOC453353), mRNA Length = 11427 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgcagcggcagaggcagc 184 |||||||||||||||||||| Sbjct: 9429 gccgcagcggcagaggcagc 9410
>gb|DQ213299.1| Taeniopygia guttata clone 0061P0022E10 BRCA2 and CDKN1A-interacting protein-like mRNA, complete sequence Length = 1286 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 agcggcagaggcagcgcccg 189 |||||||||||||||||||| Sbjct: 96 agcggcagaggcagcgcccg 77
>gb|AC114651.11| Mus musculus chromosome 1, clone RP24-153E5, complete sequence Length = 176384 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gcagcggcagaggcagcgcc 187 |||||||||||||||||||| Sbjct: 154827 gcagcggcagaggcagcgcc 154846
>ref|XM_584418.2| PREDICTED: Bos taurus similar to T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Homeobox TLX-2) (PMUR10F) (LOC539041), mRNA Length = 855 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 cggccgcagcggcagaggcagcgc 186 ||||||||||||| |||||||||| Sbjct: 735 cggccgcagcggccgaggcagcgc 712
>ref|XM_958626.1| Neurospora crassa OR74A hypothetical protein (NCU00912.1) partial mRNA Length = 1128 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 gatgttctccctgatggcat 438 |||||||||||||||||||| Sbjct: 1104 gatgttctccctgatggcat 1085
>ref|XM_325091.1| Neurospora crassa OR74A hypothetical protein (NCU00912.1) partial mRNA Length = 1128 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 gatgttctccctgatggcat 438 |||||||||||||||||||| Sbjct: 1104 gatgttctccctgatggcat 1085
>gb|BC044484.1| Danio rerio heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone IMAGE:3817156), partial cds Length = 1306 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cttcctccgcctctccctct 405 |||||||||||||||||||| Sbjct: 644 cttcctccgcctctccctct 625
>gb|BC056723.1| Danio rerio heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone IMAGE:6792233) Length = 1465 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cttcctccgcctctccctct 405 |||||||||||||||||||| Sbjct: 624 cttcctccgcctctccctct 605
>gb|BC056530.1| Danio rerio heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone IMAGE:6792071), partial cds Length = 1465 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cttcctccgcctctccctct 405 |||||||||||||||||||| Sbjct: 624 cttcctccgcctctccctct 605
>ref|XM_817728.1| Trypanosoma brucei TREU927 valosin-containing protein homolog (Tb10.70.1190) partial mRNA Length = 2343 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 gtacttgcggatgtcggcgtcact 286 ||||||||||||||| |||||||| Sbjct: 2223 gtacttgcggatgtcagcgtcact 2200
>ref|XM_804187.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506399.80) partial mRNA Length = 1221 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 cgaatccacgagactgctgcagcg 246 ||||||||||||| |||||||||| Sbjct: 422 cgaatccacgagattgctgcagcg 399
>gb|AC113124.9| Mus musculus chromosome 19, clone RP23-350M1, complete sequence Length = 216547 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 cttcctccgcctctccctct 405 |||||||||||||||||||| Sbjct: 122217 cttcctccgcctctccctct 122236
>ref|XM_502698.1| Yarrowia lipolytica CLIB122, YALI0D11418g predicted mRNA Length = 1311 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 gatgtccttctcgatgttct 426 |||||||||||||||||||| Sbjct: 159 gatgtccttctcgatgttct 140
>emb|BX842682.1| Neurospora crassa DNA linkage group I BAC contig B13C5 Length = 116467 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 gatgttctccctgatggcat 438 |||||||||||||||||||| Sbjct: 30037 gatgttctccctgatggcat 30018
>emb|BX088707.15| Zebrafish DNA sequence from clone CH211-195B11 in linkage group 14, complete sequence Length = 137128 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cttcctccgcctctccctct 405 |||||||||||||||||||| Sbjct: 129312 cttcctccgcctctccctct 129293
>emb|BX544890.7| Zebrafish DNA sequence from clone DKEY-240I4 in linkage group 14, complete sequence Length = 93993 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cttcctccgcctctccctct 405 |||||||||||||||||||| Sbjct: 33512 cttcctccgcctctccctct 33493
>gb|AC023740.4| Drosophila melanogaster X BAC RP98-27J18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163764 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cggccgcagcggcagaggcagcgc 186 |||| ||||||||||||||||||| Sbjct: 96006 cggcggcagcggcagaggcagcgc 96029
>gb|AF095239.1|GMFIBH1 Galleria mellonella heavy-chain fibroin (Fib-H) gene, 5' partial cds Length = 6999 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ggctgctgaggcagcggatg 153 |||||||||||||||||||| Sbjct: 3510 ggctgctgaggcagcggatg 3491
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 atcagcaccgctgaaccctt 489 |||||||||||||||||||| Sbjct: 4319178 atcagcaccgctgaaccctt 4319197
>gb|AC183495.1| Brassica oleracea Contig A, complete sequence Length = 356505 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 gctgaacccttgggtgtact 498 |||||||||||||||||||| Sbjct: 43548 gctgaacccttgggtgtact 43529
>ref|XM_691739.1| PREDICTED: Danio rerio similar to Hnrpa0 protein (LOC573681), mRNA Length = 1284 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cttcctccgcctctccctct 405 |||||||||||||||||||| Sbjct: 647 cttcctccgcctctccctct 628
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 aactatataaatcatcatca 131 |||||||||||||||||||| Sbjct: 27642096 aactatataaatcatcatca 27642077
>gb|AC009258.3|AC009258 Drosophila melanogaster, chromosome 3R, region 85C-85C, BAC clone BACR09F04, complete sequence Length = 176036 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gcagcggcagaggcagcgcc 187 |||||||||||||||||||| Sbjct: 120341 gcagcggcagaggcagcgcc 120360
>gb|AC069240.23| Homo sapiens 12 BAC RP11-385N17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 210010 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 tccttcctccgcctctccct 403 |||||||||||||||||||| Sbjct: 47446 tccttcctccgcctctccct 47465
>dbj|AP006055.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0778G11 Length = 59211 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 aactatataaatcatcatca 131 |||||||||||||||||||| Sbjct: 46279 aactatataaatcatcatca 46260
>gb|AE005149.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 10 of 32 of the complete genome Length = 10686 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 atcaacctcgtcctcctccatcgc 373 |||||| ||||||||||||||||| Sbjct: 9250 atcaacgtcgtcctcctccatcgc 9227
>gb|BC066434.1| Danio rerio heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:77280 IMAGE:6964851), complete cds Length = 1820 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cttcctccgcctctccctct 405 |||||||||||||||||||| Sbjct: 631 cttcctccgcctctccctct 612
>gb|AE003681.5| Drosophila melanogaster chromosome 3R, section 19 of 118 of the complete sequence Length = 306650 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gcagcggcagaggcagcgcc 187 |||||||||||||||||||| Sbjct: 126570 gcagcggcagaggcagcgcc 126589
>gb|AF044488.1|AF044488 Trypanosoma brucei valosin-containing protein homolog (VCP) gene, complete cds Length = 2463 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 gtacttgcggatgtcggcgtcact 286 ||||||||||||||| |||||||| Sbjct: 2307 gtacttgcggatgtcagcgtcact 2284
>gb|AE003435.3| Drosophila melanogaster chromosome X, section 19 of 74 of the complete sequence Length = 290042 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cggccgcagcggcagaggcagcgc 186 |||| ||||||||||||||||||| Sbjct: 21510 cggcggcagcggcagaggcagcgc 21533
>gb|AC005696.1|AC005696 Homo sapiens chromosome 17, clone hRPK.74_E_22, complete sequence Length = 177411 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 agaggcagcgcccgcagccg 195 |||||||||||||||||||| Sbjct: 125327 agaggcagcgcccgcagccg 125346
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 gatgtccttctcgatgttct 426 |||||||||||||||||||| Sbjct: 1429531 gatgtccttctcgatgttct 1429550
>ref|NM_214706.1| Danio rerio heterogeneous nuclear ribonucleoprotein A0 (hnrpa0), mRNA Length = 1820 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cttcctccgcctctccctct 405 |||||||||||||||||||| Sbjct: 631 cttcctccgcctctccctct 612
>gb|AF016485.1| Halobacterium sp. NRC-1 plasmid pNRC100, complete sequence Length = 191346 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 atcaacctcgtcctcctccatcgc 373 |||||| ||||||||||||||||| Sbjct: 111336 atcaacgtcgtcctcctccatcgc 111313 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,459,092 Number of Sequences: 3902068 Number of extensions: 4459092 Number of successful extensions: 86151 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85691 Number of HSP's gapped (non-prelim): 445 length of query: 509 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 487 effective length of database: 17,147,199,772 effective search space: 8350686288964 effective search space used: 8350686288964 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
