ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal15j23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK065414.1| Oryza sativa (japonica cultivar-group) cDNA clon... 545 e-152
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 94 8e-16
3dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic D... 94 8e-16
4dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic D... 94 8e-16
5gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence 82 3e-12
6ref|XM_481915.1| Oryza sativa (japonica cultivar-group), mRNA 64 7e-07
7ref|XM_481914.1| Oryza sativa (japonica cultivar-group), mRNA 64 7e-07
8ref|XM_507201.1| PREDICTED Oryza sativa (japonica cultivar-group... 64 7e-07
9dbj|AK112035.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 7e-07
10dbj|AK105899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 7e-07
11dbj|AK070322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 7e-07
12gb|AY106382.1| Zea mays PCO146928 mRNA sequence 56 2e-04
13emb|Z19058.1|GGCEK7A G.gallus Cek7 gene 48 0.041
14ref|NM_205105.1| Gallus gallus EPH receptor A5 (EPHA5), mRNA 48 0.041
15gb|U03910.1|GGCEK7B Gallus gallus receptor-type protein-tyrosine... 48 0.041
16gb|DQ167205.1| Zea mays putative wound responsive protein mRNA, ... 46 0.16
17emb|AL390965.15| Human DNA sequence from clone RP11-640E11 on ch... 44 0.65
18dbj|AB009885.1| Nicotiana tabacum wound inducive mRNA , complete... 44 0.65
19gb|AC122910.5| Mus musculus BAC clone RP23-54P3 from chromosome ... 42 2.6
20gb|AC114574.8| Mus musculus chromosome 6, clone RP23-151F20, com... 42 2.6
21emb|AL365500.9| Human DNA sequence from clone RP11-232C13 on chr... 42 2.6
22gb|AC164097.2| Mus musculus BAC clone RP23-141F18 from chromosom... 42 2.6
23gb|AC153155.6| Mus musculus BAC clone RP23-25J23 from chromosome... 42 2.6
24gb|AC154705.2| Mus musculus BAC clone RP23-131F11 from chromosom... 42 2.6
25emb|AL110292.4|CNS018P1 Human chromosome 14 DNA sequence BAC R-3... 42 2.6
26gb|AC154019.3| Mus musculus 6 BAC RP24-374A6 (Roswell Park Cance... 42 2.6
27gb|AC148011.3| Mus musculus BAC clone RP23-202I21 from 18, compl... 42 2.6

>dbj|AK065414.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022J10, full
            insert sequence
          Length = 1348

 Score =  545 bits (275), Expect = e-152
 Identities = 503/579 (86%)
 Strand = Plus / Minus

                                                                        
Query: 153  ctgttatatcgtgttctttttgtttgcccggaacatgagaaggcgatctctgtattgagc 212
            |||||| ||| |||||||||| |||||||||||||||| |||  ||||||||||||||||
Sbjct: 1113 ctgttaaatcatgttctttttctttgcccggaacatgaaaagctgatctctgtattgagc 1054

                                                                        
Query: 213  agcatctttataacgttcctcaacagcagcaacaagcatgccgcgcaccaaatcaaactc 272
            ||||||||| || ||||||||||||||||| || |||||   ||| ||||||||||||||
Sbjct: 1053 agcatctttgtagcgttcctcaacagcagcgaccagcatattgcggaccaaatcaaactc 994

                                                                        
Query: 273  ctgggcttcaaagcaaggctggtcgccgggcttgtccagtctcgcgtattggatttggtc 332
             ||||| ||||||||||| || ||| | ||| |||| ||||| | |||||||| ||||||
Sbjct: 993  ttgggcctcaaagcaaggttgatcgtcaggcctgtcaagtcttgtgtattggaattggtc 934

                                                                        
Query: 333  agagttcacgtagctcccagttggctttggctgtatcactttcagaccgttgttgtatgc 392
             ||| | || |||||| ||| |||  |||| ||||  |||||||  || ||||| || ||
Sbjct: 933  tgagcttacatagctctcagatggtgttggttgtacaactttcaatccattgttatacgc 874

                                                                        
Query: 393  aatgcgcttattgacttgtataggaaccttgcaccggaaagcaatgttgatggcatctga 452
             || ||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 873  tatacgcctattcacttgtataggaaccttacaccggaaagcaatgttgatggcatctga 814

                                                                        
Query: 453  tggcttgagatcaaaactaataacctcttcttcatttccagtctttgcaagatacaatct 512
            |||||||||||| || ||||||  ||| |||||||| ||| |||| ||||||||||||| 
Sbjct: 813  tggcttgagatctaagctaatagtctcctcttcattgccaatcttagcaagatacaatcg 754

                                                                        
Query: 513  agagtagtaagcatcatgcaccatttctgtaatccgcaccaaacgtaccgtgtatcccat 572
            ||| ||||| |||||||| |||||||||||||||||||||||||||||||  ||||||||
Sbjct: 753  agaatagtatgcatcatggaccatttctgtaatccgcaccaaacgtaccgcatatcccat 694

                                                                        
Query: 573  catttcggtcatctcctttaccacattataaattgttggccttggaatccgaatgttccg 632
            | ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 693  cctttcggtcatctcctttaccacattataaatagttggccttggaattcgaatgttccg 634

                                                                        
Query: 633  aagggcggccagtagcataatacttggtgtctccatgacaataatggggagcagaagatc 692
            |||||| ||||| | ||||||||||||||| |||||||| ||||| || |||| ||||||
Sbjct: 633  aagggcagccagcaacataatacttggtgtttccatgacgataattggaagcaaaagatc 574

                                                   
Query: 693  gctcccatcttccatcttgagcacgatagcatggtgagg 731
             || |||||||||||||| || || ||||||||||||||
Sbjct: 573  acttccatcttccatcttcagaacaatagcatggtgagg 535



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                            
Query: 499      gcaagatacaatctagagtagtaagcatcatgcaccatttctgtaatccgcaccaaacgt 558
                ||||||||||||| ||| ||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 29067850 gcaagatacaatcgagaatagtatgcatcatggaccatttctgtaatccgcaccaaacgt 29067909

                   
Query: 559      acc 561
                |||
Sbjct: 29067910 acc 29067912



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                            
Query: 418      accttgcaccggaaagcaatgttgatggcatctgatggcttgagatcaaaactaataacc 477
                ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||  |
Sbjct: 29067443 accttacaccggaaagcaatgttgatggcatctgatggcttgagatctaagctaatagtc 29067502

                           
Query: 478      tcttcttcatt 488
                || ||||||||
Sbjct: 29067503 tcctcttcatt 29067513



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 51/53 (96%)
 Strand = Plus / Plus

                                                                     
Query: 565      tatcccatcatttcggtcatctcctttaccacattataaattgttggccttgg 617
                ||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 29068210 tatcccatcctttcggtcatctcctttaccacattataaatagttggccttgg 29068262



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                            
Query: 212      cagcatctttataacgttcctcaacagcagcaacaagcatgccgcgcaccaaatcaaact 271
                |||||||||| || ||||||||||||||||| || |||||   ||| |||||||||||||
Sbjct: 29066714 cagcatctttgtagcgttcctcaacagcagcgaccagcatattgcggaccaaatcaaact 29066773

                                   
Query: 272      cctgggcttcaaagcaagg 290
                | ||||| |||||||||||
Sbjct: 29066774 cttgggcctcaaagcaagg 29066792



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                            
Query: 153      ctgttatatcgtgttctttttgtttgcccggaacatgagaaggcgatctctgtattgagc 212
                |||||| ||| |||||||||| |||||||||||||||| |||  ||||||||||||||||
Sbjct: 29066393 ctgttaaatcatgttctttttctttgcccggaacatgaaaagctgatctctgtattgagc 29066452



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 622      cgaatgttccgaagggcggccagtagcataatacttggtgtctcca 667
                ||||||||||||||||| ||||| | ||||||||||||||| ||||
Sbjct: 29068385 cgaatgttccgaagggcagccagcaacataatacttggtgtttcca 29068430



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                            
Query: 668      tgacaataatggggagcagaagatcgctcccatcttccatcttgagcacgatagcatggt 727
                |||| ||||| || |||| |||||| || |||||||||||||| || || ||||||||||
Sbjct: 29068518 tgacgataattggaagcaaaagatcacttccatcttccatcttcagaacaatagcatggt 29068577

                    
Query: 728      gagg 731
                ||||
Sbjct: 29068578 gagg 29068581



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 93/117 (79%)
 Strand = Plus / Plus

                                                                            
Query: 305      tgtccagtctcgcgtattggatttggtcagagttcacgtagctcccagttggctttggct 364
                |||| ||||| | |||||||| |||||| ||| | || |||||| ||| |||  |||| |
Sbjct: 29066891 tgtcaagtcttgtgtattggaattggtctgagcttacatagctctcagatggtgttggtt 29066950

                                                                         
Query: 365      gtatcactttcagaccgttgttgtatgcaatgcgcttattgacttgtataggaacct 421
                |||  |||||||  || ||||| || || || ||| |||| ||||||||||||||||
Sbjct: 29066951 gtacaactttcaatccattgttatacgctatacgcctattcacttgtataggaacct 29067007



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>dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0047E11
          Length = 148109

 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                          
Query: 499    gcaagatacaatctagagtagtaagcatcatgcaccatttctgtaatccgcaccaaacgt 558
              ||||||||||||| ||| ||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 112208 gcaagatacaatcgagaatagtatgcatcatggaccatttctgtaatccgcaccaaacgt 112267

                 
Query: 559    acc 561
              |||
Sbjct: 112268 acc 112270



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                          
Query: 418    accttgcaccggaaagcaatgttgatggcatctgatggcttgagatcaaaactaataacc 477
              ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||  |
Sbjct: 111801 accttacaccggaaagcaatgttgatggcatctgatggcttgagatctaagctaatagtc 111860

                         
Query: 478    tcttcttcatt 488
              || ||||||||
Sbjct: 111861 tcctcttcatt 111871



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 51/53 (96%)
 Strand = Plus / Plus

                                                                   
Query: 565    tatcccatcatttcggtcatctcctttaccacattataaattgttggccttgg 617
              ||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 112568 tatcccatcctttcggtcatctcctttaccacattataaatagttggccttgg 112620



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                          
Query: 212    cagcatctttataacgttcctcaacagcagcaacaagcatgccgcgcaccaaatcaaact 271
              |||||||||| || ||||||||||||||||| || |||||   ||| |||||||||||||
Sbjct: 111072 cagcatctttgtagcgttcctcaacagcagcgaccagcatattgcggaccaaatcaaact 111131

                                 
Query: 272    cctgggcttcaaagcaagg 290
              | ||||| |||||||||||
Sbjct: 111132 cttgggcctcaaagcaagg 111150



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                          
Query: 153    ctgttatatcgtgttctttttgtttgcccggaacatgagaaggcgatctctgtattgagc 212
              |||||| ||| |||||||||| |||||||||||||||| |||  ||||||||||||||||
Sbjct: 110751 ctgttaaatcatgttctttttctttgcccggaacatgaaaagctgatctctgtattgagc 110810



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                            
Query: 622    cgaatgttccgaagggcggccagtagcataatacttggtgtctcca 667
              ||||||||||||||||| ||||| | ||||||||||||||| ||||
Sbjct: 112743 cgaatgttccgaagggcagccagcaacataatacttggtgtttcca 112788



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                          
Query: 668    tgacaataatggggagcagaagatcgctcccatcttccatcttgagcacgatagcatggt 727
              |||| ||||| || |||| |||||| || |||||||||||||| || || ||||||||||
Sbjct: 112876 tgacgataattggaagcaaaagatcacttccatcttccatcttcagaacaatagcatggt 112935

                  
Query: 728    gagg 731
              ||||
Sbjct: 112936 gagg 112939



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 93/117 (79%)
 Strand = Plus / Plus

                                                                          
Query: 305    tgtccagtctcgcgtattggatttggtcagagttcacgtagctcccagttggctttggct 364
              |||| ||||| | |||||||| |||||| ||| | || |||||| ||| |||  |||| |
Sbjct: 111249 tgtcaagtcttgtgtattggaattggtctgagcttacatagctctcagatggtgttggtt 111308

                                                                       
Query: 365    gtatcactttcagaccgttgttgtatgcaatgcgcttattgacttgtataggaacct 421
              |||  |||||||  || ||||| || || || ||| |||| ||||||||||||||||
Sbjct: 111309 gtacaactttcaatccattgttatacgctatacgcctattcacttgtataggaacct 111365



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>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0421H07
          Length = 158126

 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                         
Query: 499   gcaagatacaatctagagtagtaagcatcatgcaccatttctgtaatccgcaccaaacgt 558
             ||||||||||||| ||| ||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 28216 gcaagatacaatcgagaatagtatgcatcatggaccatttctgtaatccgcaccaaacgt 28275

                
Query: 559   acc 561
             |||
Sbjct: 28276 acc 28278



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                         
Query: 418   accttgcaccggaaagcaatgttgatggcatctgatggcttgagatcaaaactaataacc 477
             ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||  |
Sbjct: 27809 accttacaccggaaagcaatgttgatggcatctgatggcttgagatctaagctaatagtc 27868

                        
Query: 478   tcttcttcatt 488
             || ||||||||
Sbjct: 27869 tcctcttcatt 27879



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 51/53 (96%)
 Strand = Plus / Plus

                                                                  
Query: 565   tatcccatcatttcggtcatctcctttaccacattataaattgttggccttgg 617
             ||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 28576 tatcccatcctttcggtcatctcctttaccacattataaatagttggccttgg 28628



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                         
Query: 212   cagcatctttataacgttcctcaacagcagcaacaagcatgccgcgcaccaaatcaaact 271
             |||||||||| || ||||||||||||||||| || |||||   ||| |||||||||||||
Sbjct: 27080 cagcatctttgtagcgttcctcaacagcagcgaccagcatattgcggaccaaatcaaact 27139

                                
Query: 272   cctgggcttcaaagcaagg 290
             | ||||| |||||||||||
Sbjct: 27140 cttgggcctcaaagcaagg 27158



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                         
Query: 153   ctgttatatcgtgttctttttgtttgcccggaacatgagaaggcgatctctgtattgagc 212
             |||||| ||| |||||||||| |||||||||||||||| |||  ||||||||||||||||
Sbjct: 26759 ctgttaaatcatgttctttttctttgcccggaacatgaaaagctgatctctgtattgagc 26818



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 622   cgaatgttccgaagggcggccagtagcataatacttggtgtctcca 667
             ||||||||||||||||| ||||| | ||||||||||||||| ||||
Sbjct: 28751 cgaatgttccgaagggcagccagcaacataatacttggtgtttcca 28796



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                         
Query: 668   tgacaataatggggagcagaagatcgctcccatcttccatcttgagcacgatagcatggt 727
             |||| ||||| || |||| |||||| || |||||||||||||| || || ||||||||||
Sbjct: 28884 tgacgataattggaagcaaaagatcacttccatcttccatcttcagaacaatagcatggt 28943

                 
Query: 728   gagg 731
             ||||
Sbjct: 28944 gagg 28947



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 93/117 (79%)
 Strand = Plus / Plus

                                                                         
Query: 305   tgtccagtctcgcgtattggatttggtcagagttcacgtagctcccagttggctttggct 364
             |||| ||||| | |||||||| |||||| ||| | || |||||| ||| |||  |||| |
Sbjct: 27257 tgtcaagtcttgtgtattggaattggtctgagcttacatagctctcagatggtgttggtt 27316

                                                                      
Query: 365   gtatcactttcagaccgttgttgtatgcaatgcgcttattgacttgtataggaacct 421
             |||  |||||||  || ||||| || || || ||| |||| ||||||||||||||||
Sbjct: 27317 gtacaactttcaatccattgttatacgctatacgcctattcacttgtataggaacct 27373



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>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence
          Length = 204120

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                      
Query: 418   accttgcaccggaaagcaatgttgatggcatctgatggcttgagatcaaaactaata 474
             |||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct: 86510 accttgcaacggaaagcaatgttgatagcatccgatggcttgaggtcaaaactaata 86566



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                         
Query: 495   ctttgcaagatacaatctagagtagtaagcatcatgcaccatttctgtaatccgcaccaa 554
             |||||||||||||| || ||| ||||| || ||||| |||||||||||||||||||||||
Sbjct: 86674 ctttgcaagatacagtcgagaatagtatgcgtcatggaccatttctgtaatccgcaccaa 86733

                
Query: 555   acg 557
             |||
Sbjct: 86734 acg 86736



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                       
Query: 676   atggggagcagaagatcgctcccatcttccatcttgagcacgatagcatggtgaggcg 733
             ||||||||||| || ||||| || ||||||||||||||||| || || ||||| ||||
Sbjct: 87180 atggggagcaggaggtcgctgccgtcttccatcttgagcacaatcgcgtggtgcggcg 87237



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>ref|XM_481915.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1119

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 405 gacttgtataggaaccttgcaccggaaagcaatgttgatggcatctga 452
           ||||||||||||||||||||| || | ||||||||| |||||||||||
Sbjct: 693 gacttgtataggaaccttgcagcgaacagcaatgtttatggcatctga 646



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>ref|XM_481914.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1460

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 405 gacttgtataggaaccttgcaccggaaagcaatgttgatggcatctga 452
           ||||||||||||||||||||| || | ||||||||| |||||||||||
Sbjct: 988 gacttgtataggaaccttgcagcgaacagcaatgtttatggcatctga 941



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>ref|XM_507201.1| PREDICTED Oryza sativa (japonica cultivar-group), P0426E02.15-2
           mRNA
          Length = 1525

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 405 gacttgtataggaaccttgcaccggaaagcaatgttgatggcatctga 452
           ||||||||||||||||||||| || | ||||||||| |||||||||||
Sbjct: 968 gacttgtataggaaccttgcagcgaacagcaatgtttatggcatctga 921



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>dbj|AK112035.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G04, full
           insert sequence
          Length = 1119

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 405 gacttgtataggaaccttgcaccggaaagcaatgttgatggcatctga 452
           ||||||||||||||||||||| || | ||||||||| |||||||||||
Sbjct: 693 gacttgtataggaaccttgcagcgaacagcaatgtttatggcatctga 646



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>dbj|AK105899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F07, full
           insert sequence
          Length = 1460

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 405 gacttgtataggaaccttgcaccggaaagcaatgttgatggcatctga 452
           ||||||||||||||||||||| || | ||||||||| |||||||||||
Sbjct: 988 gacttgtataggaaccttgcagcgaacagcaatgtttatggcatctga 941



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>dbj|AK070322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052C20, full
           insert sequence
          Length = 1525

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 405 gacttgtataggaaccttgcaccggaaagcaatgttgatggcatctga 452
           ||||||||||||||||||||| || | ||||||||| |||||||||||
Sbjct: 968 gacttgtataggaaccttgcagcgaacagcaatgtttatggcatctga 921



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>gb|AY106382.1| Zea mays PCO146928 mRNA sequence
          Length = 1474

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 405 gacttgtataggaaccttgcaccggaaagcaatgttgatggcatctga 452
           |||||||| |||||||||||| || | ||||||||| |||||||||||
Sbjct: 955 gacttgtacaggaaccttgcaacgaacagcaatgtttatggcatctga 908



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>emb|Z19058.1|GGCEK7A G.gallus Cek7 gene
          Length = 2396

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 102 cgaagcttctatttccttggcaaa 125
           ||||||||||||||||||||||||
Sbjct: 415 cgaagcttctatttccttggcaaa 392



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>ref|NM_205105.1| Gallus gallus EPH receptor A5 (EPHA5), mRNA
          Length = 4124

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 102  cgaagcttctatttccttggcaaa 125
            ||||||||||||||||||||||||
Sbjct: 2031 cgaagcttctatttccttggcaaa 2008



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>gb|U03910.1|GGCEK7B Gallus gallus receptor-type protein-tyrosine kinase precursor (Cek7)
            mRNA, complete cds
          Length = 4124

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 102  cgaagcttctatttccttggcaaa 125
            ||||||||||||||||||||||||
Sbjct: 2031 cgaagcttctatttccttggcaaa 2008



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>gb|DQ167205.1| Zea mays putative wound responsive protein mRNA, complete cds
          Length = 717

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 414 aggaaccttgcaccggaaagcaatgttgatggcatctga 452
           |||||||||||| || | ||||||||| |||||||||||
Sbjct: 702 aggaaccttgcaacgaacagcaatgtttatggcatctga 664



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>emb|AL390965.15| Human DNA sequence from clone RP11-640E11 on chromosome 13 Contains a
             solute carrier family 25 (mitochondrial carrier; adenine
             nucleotide translocator), member 5 (SLC25A5) pseudogene,
             complete sequence
          Length = 92179

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 31    aaagaggaaaaatattaaaagt 52
             ||||||||||||||||||||||
Sbjct: 66954 aaagaggaaaaatattaaaagt 66975



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>dbj|AB009885.1| Nicotiana tabacum wound inducive mRNA , complete cds
          Length = 1525

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 400 ttattgacttgtataggaaccttgcaccggaaagcaatgttgatggcatc 449
           |||||||||||||| || ||||||||  | | |||||||||||| |||||
Sbjct: 959 ttattgacttgtattggcaccttgcattgcacagcaatgttgatcgcatc 910



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>gb|AC122910.5| Mus musculus BAC clone RP23-54P3 from chromosome 6, complete sequence
          Length = 221390

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 29     tcaaagaggaaaaatattaaa 49
              |||||||||||||||||||||
Sbjct: 102072 tcaaagaggaaaaatattaaa 102092



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>gb|AC114574.8| Mus musculus chromosome 6, clone RP23-151F20, complete sequence
          Length = 252723

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 466    aaactaataacctcttcttcatttc 490
              ||||| |||||||||||||||||||
Sbjct: 226520 aaacttataacctcttcttcatttc 226544



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>emb|AL365500.9| Human DNA sequence from clone RP11-232C13 on chromosome 10 Contains the
             5' end of a novel gene, complete sequence
          Length = 153558

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 262   aaatcaaactcctgggcttca 282
             |||||||||||||||||||||
Sbjct: 33374 aaatcaaactcctgggcttca 33354



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>gb|AC164097.2| Mus musculus BAC clone RP23-141F18 from chromosome 16, complete sequence
          Length = 217725

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 75     attcacatcgtgcatcttgatgttt 99
              |||||||| ||||||||||||||||
Sbjct: 183194 attcacatagtgcatcttgatgttt 183170



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>gb|AC153155.6| Mus musculus BAC clone RP23-25J23 from chromosome 18, complete sequence
          Length = 227880

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 35     aggaaaaatattaaaagttac 55
              |||||||||||||||||||||
Sbjct: 192259 aggaaaaatattaaaagttac 192279



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>gb|AC154705.2| Mus musculus BAC clone RP23-131F11 from chromosome 16, complete sequence
          Length = 177886

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 75     attcacatcgtgcatcttgatgttt 99
              |||||||| ||||||||||||||||
Sbjct: 144886 attcacatagtgcatcttgatgttt 144910



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>emb|AL110292.4|CNS018P1 Human chromosome 14 DNA sequence BAC R-384J4 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 177427

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 265    tcaaactcctgggcttcaaag 285
              |||||||||||||||||||||
Sbjct: 122902 tcaaactcctgggcttcaaag 122882



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>gb|AC154019.3| Mus musculus 6 BAC RP24-374A6 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 169229

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 466    aaactaataacctcttcttcatttc 490
              ||||| |||||||||||||||||||
Sbjct: 145706 aaacttataacctcttcttcatttc 145682



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>gb|AC148011.3| Mus musculus BAC clone RP23-202I21 from 18, complete sequence
          Length = 220253

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 35     aggaaaaatattaaaagttac 55
              |||||||||||||||||||||
Sbjct: 103106 aggaaaaatattaaaagttac 103086


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,481,735
Number of Sequences: 3902068
Number of extensions: 7481735
Number of successful extensions: 197178
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 197044
Number of HSP's gapped (non-prelim): 134
length of query: 737
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 714
effective length of database: 17,143,297,704
effective search space: 12240314560656
effective search space used: 12240314560656
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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