ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal15j15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ATG9_KLULA (Q6CT08) Autophagy-related protein 9 29 2.8
2NUDH_BORPE (Q7VTZ7) Probable (di)nucleoside polyphosphate hydrol... 29 2.8
3NUDH_BORPA (Q7W482) Probable (di)nucleoside polyphosphate hydrol... 29 2.8
4NUDH_BORBR (Q7WFP0) Probable (di)nucleoside polyphosphate hydrol... 29 2.8
5HEMH_PSESM (Q888A2) Ferrochelatase (EC 4.99.1.1) (Protoheme ferr... 28 4.9
6ZEST_DROVI (Q24762) Regulatory protein zeste 28 8.3

>ATG9_KLULA (Q6CT08) Autophagy-related protein 9|
          Length = 908

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 89  PTSLIRTCFLVQTLQWRFCIC 27
           P  L+RTC L +TL+W   +C
Sbjct: 455 PVPLLRTCALTKTLEWNINLC 475



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>NUDH_BORPE (Q7VTZ7) Probable (di)nucleoside polyphosphate hydrolase (EC|
           3.6.1.-)
          Length = 190

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
 Frame = +3

Query: 36  ESPLQC----LHQETGAD-QRSRVLGTAADKLKYTLTDH 137
           ESP+Q     LH+E G   +  R+LG   D L+Y + DH
Sbjct: 44  ESPVQAMYRELHEEVGLKPEHVRILGRTRDWLRYNVPDH 82



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>NUDH_BORPA (Q7W482) Probable (di)nucleoside polyphosphate hydrolase (EC|
           3.6.1.-)
          Length = 190

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
 Frame = +3

Query: 36  ESPLQC----LHQETGAD-QRSRVLGTAADKLKYTLTDH 137
           ESP+Q     LH+E G   +  R+LG   D L+Y + DH
Sbjct: 44  ESPVQAMYRELHEEVGLKPEHVRILGRTRDWLRYNVPDH 82



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>NUDH_BORBR (Q7WFP0) Probable (di)nucleoside polyphosphate hydrolase (EC|
           3.6.1.-)
          Length = 190

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
 Frame = +3

Query: 36  ESPLQC----LHQETGAD-QRSRVLGTAADKLKYTLTDH 137
           ESP+Q     LH+E G   +  R+LG   D L+Y + DH
Sbjct: 44  ESPVQAMYRELHEEVGLKPEHVRILGRTRDWLRYNVPDH 82



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>HEMH_PSESM (Q888A2) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme|
           synthetase)
          Length = 340

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -3

Query: 104 CCTEYPTSLIRTCFLVQTLQWRFCICKNVNVP 9
           CC   P  ++ TC+  Q LQ      K + +P
Sbjct: 211 CCMTAPAQVVATCYRAQCLQSAAAFAKRMGIP 242



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>ZEST_DROVI (Q24762) Regulatory protein zeste|
          Length = 618

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +3

Query: 15  VNVFTNTESPLQCLHQETGADQRSRVLGTAADKLKYTLTDH 137
           +N F   E+ L+C  Q+   + +   L  A D+LKY    H
Sbjct: 551 INYFKVKEAELRCKEQQLATEAKKIELNKAQDELKYMREVH 591


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,177,191
Number of Sequences: 219361
Number of extensions: 524097
Number of successful extensions: 1162
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 80,573,946
effective HSP length: 54
effective length of database: 68,728,452
effective search space used: 1649482848
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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