ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal6m08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY106468.1| Zea mays PCO103506 mRNA sequence 335 9e-89
2dbj|AB112936.1| Zea mays ZmpOMT1 mRNA for plastidic 2-oxoglutara... 327 2e-86
3dbj|AK099798.1| Oryza sativa (japonica cultivar-group) cDNA clon... 321 1e-84
4dbj|AK061957.1| Oryza sativa (japonica cultivar-group) cDNA clon... 321 1e-84
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 254 3e-64
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 254 3e-64
7emb|AL713900.4|CNS07YQ0 Oryza sativa chromosome 12, . BAC OJ1126... 254 3e-64
8dbj|AB190775.1| Mesembryanthemum crystallinum DCT1 mRNA for puta... 90 9e-15
9gb|U13238.1|SOU13238 Spinacia oleracea envelope membrane 2-oxogl... 78 3e-11
10ref|NM_121289.3| Arabidopsis thaliana oxoglutarate:malate antipo... 64 5e-07
11emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, B... 64 5e-07
12gb|AF370494.1|AF370494 Arabidopsis thaliana 2-oxoglutarate/malat... 64 5e-07
13emb|BX831893.1|CNS0A11L Arabidopsis thaliana Full-length cDNA Co... 64 5e-07
14emb|BX831583.1|CNS0A162 Arabidopsis thaliana Full-length cDNA Co... 64 5e-07
15emb|BX833869.1|CNS0A0DK Arabidopsis thaliana Full-length cDNA Co... 64 5e-07
16emb|BX831984.1|CNS0A12U Arabidopsis thaliana Full-length cDNA Co... 60 8e-06
17gb|AY279308.1| Malus x domestica oxoglutarate/malate translocato... 56 1e-04
18emb|BX830891.1|CNS0A0U0 Arabidopsis thaliana Full-length cDNA Co... 52 0.002
19emb|BX831708.1|CNS0A15V Arabidopsis thaliana Full-length cDNA Co... 50 0.008
20dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
21gb|AC154681.2| Mus musculus BAC clone RP24-314G22 from chromosom... 44 0.47
22dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
23dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
24gb|AC008325.5| Drosophila melanogaster clone BACR05M06, complete... 42 1.9
25gb|AC110090.6| Mus musculus BAC clone RP23-27L4 from chromosome ... 42 1.9
26gb|AE017157.1| Chlamydophila pneumoniae TW-183, section 1 of 4 o... 42 1.9
27gb|AC110607.7| Homo sapiens chromosome 15, clone CTD-2632K10, co... 42 1.9
28gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome 42 1.9
29gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome 42 1.9
30dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, compl... 42 1.9
31gb|AE003609.4| Drosophila melanogaster chromosome 2L, section 18... 42 1.9
32ref|NM_123924.2| Arabidopsis thaliana lipid binding AT5G45560 mR... 40 7.4
33gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 7.4
34gb|AC007861.5| Homo sapiens chromosome 16 clone RP11-189E14, com... 40 7.4
35gb|AC007607.6| Homo sapiens chromosome 16 clone RP11-369H7, comp... 40 7.4
36emb|AL603913.14| Mouse DNA sequence from clone RP23-103H9 on chr... 40 7.4
37emb|BX897725.7| Zebrafish DNA sequence from clone CH211-244P18 i... 40 7.4
38gb|AY064989.1| Arabidopsis thaliana AT5g45560/MFC19_23 mRNA, com... 40 7.4
39dbj|AB022213.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.4
40gb|AC154260.2| Mus musculus BAC clone RP24-225C5 from 17, comple... 40 7.4
41gb|AC006499.13|AC006499 Homo sapiens chromosome 4 clone C0494H11... 40 7.4
42emb|AL929049.4| Zebrafish DNA sequence from clone DKEY-14A13 in ... 40 7.4 
>gb|AY106468.1| Zea mays PCO103506 mRNA sequence
          Length = 845

 Score =  335 bits (169), Expect = 9e-89
 Identities = 344/404 (85%)
 Strand = Plus / Minus

                                                                       
Query: 140 ttccaccagaagcctccagcaccaagccagatgatgatgttaacaacggagatgacaaat 199
           |||||||||||||| ||  | || ||||||||||||||||| ||||||||||||||||| 
Sbjct: 561 ttccaccagaagccgcccaccccgagccagatgatgatgtttacaacggagatgacaaac 502

                                                                       
Query: 200 ncatagccccaccactcagccagcggaacatancccgntccatagaanacgggggctgac 259
            ||||||||||||||| |||||  || ||||| || |  || ||||| ||||| || || 
Sbjct: 501 ccatagccccaccactgagccaatgggacatacccggcgccgtagaagacgggagcagag 442

                                                                       
Query: 260 cctatgccataatgggtcaggccacccatgaggtttgaaaggaatgacataaccatggca 319
           || ||||| || |||||    || ||||||||||| || |||||||| | ||||||||||
Sbjct: 441 ccgatgccgtagtgggtggtcccgcccatgaggttcgagaggaatgaaagaaccatggca 382

                                                                       
Query: 320 gcgaaaagcggaggggtgcccaaggcacttgccacagacaggaacgcagtgaacatcgct 379
           ||||||||||  |||||||||| |||||| ||||| ||||||||||| |||||||| |||
Sbjct: 381 gcgaaaagcgacggggtgcccagggcactcgccaccgacaggaacgcggtgaacattgct 322

                                                                       
Query: 380 ccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaagtacatnagcaccaat 439
           ||||||||||| |||||||| |||||||| ||||| |||||||||||||  |||||||  
Sbjct: 321 ccgatgtgtgcggcaccactggcaaagaaatagtgcgagtagaagtacagcagcaccagc 262

                                                                       
Query: 440 acaccgaatgagagttgccaggacagaccgagacctccaacaaacttaacaacagtctcg 499
           |||||||||||||||||||| ||||  || || |||||||||||||| ||||||||||| 
Sbjct: 261 acaccgaatgagagttgccatgacatgccaagccctccaacaaacttcacaacagtctca 202

                                                       
Query: 500 ctgaaccaagaaatcaatccatatttgttgaggtagccagccat 543
           ||||||||||| ||||  ||  ||||||||||||||||||||||
Sbjct: 201 ctgaaccaagagatcagcccgaatttgttgaggtagccagccat 158
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>dbj|AB112936.1| Zea mays ZmpOMT1 mRNA for plastidic 2-oxoglutarate/malate
            transporter, complete cds
          Length = 1907

 Score =  327 bits (165), Expect = 2e-86
 Identities = 343/404 (84%)
 Strand = Plus / Minus

                                                                        
Query: 140  ttccaccagaagcctccagcaccaagccagatgatgatgttaacaacggagatgacaaat 199
            |||||||||||||| ||  | || ||||||||||||||||| ||||||||||||||||| 
Sbjct: 1740 ttccaccagaagccgcccaccccgagccagatgatgatgtttacaacggagatgacaaac 1681

                                                                        
Query: 200  ncatagccccaccactcagccagcggaacatancccgntccatagaanacgggggctgac 259
             ||||||||||||||| |||||  || ||||| || |  || ||||| ||||| || || 
Sbjct: 1680 ccatagccccaccactgagccaatgggacatacccggcgccgtagaagacgggagcagag 1621

                                                                        
Query: 260  cctatgccataatgggtcaggccacccatgaggtttgaaaggaatgacataaccatggca 319
            || ||||| || |||||    || ||||||||||| || |||||||| | ||||||||||
Sbjct: 1620 ccgatgccgtagtgggtggtcccgcccatgaggttcgagaggaatgaaagaaccatggca 1561

                                                                        
Query: 320  gcgaaaagcggaggggtgcccaaggcacttgccacagacaggaacgcagtgaacatcgct 379
            ||||| ||||  |||||||||| |||||| ||||| ||||||||||| |||||||| |||
Sbjct: 1560 gcgaagagcgacggggtgcccagggcactcgccaccgacaggaacgcggtgaacattgct 1501

                                                                        
Query: 380  ccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaagtacatnagcaccaat 439
            ||||||||||| |||||||| || ||||| ||||| |||||||||||||  |||||||| 
Sbjct: 1500 ccgatgtgtgcggcaccactggcgaagaaatagtgcgagtagaagtacagcagcaccaag 1441

                                                                        
Query: 440  acaccgaatgagagttgccaggacagaccgagacctccaacaaacttaacaacagtctcg 499
            |||||||||||||||||||| ||||  || || |||||||||||||| ||||||||||| 
Sbjct: 1440 acaccgaatgagagttgccatgacatgccaagccctccaacaaacttcacaacagtctca 1381

                                                        
Query: 500  ctgaaccaagaaatcaatccatatttgttgaggtagccagccat 543
            ||||||||||| ||||  ||  ||||||||||||||||||||||
Sbjct: 1380 ctgaaccaagagatcagcccgaatttgttgaggtagccagccat 1337
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>dbj|AK099798.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097M20, full
            insert sequence
          Length = 1962

 Score =  321 bits (162), Expect = 1e-84
 Identities = 345/408 (84%)
 Strand = Plus / Minus

                                                                        
Query: 136  catnttccaccagaagcctccagcaccaagccagatgatgatgttaacaacggagatgac 195
            ||| |||||||||||||||||||||||||||||||||||||||||||| | ||| |||||
Sbjct: 1670 catcttccaccagaagcctccagcaccaagccagatgatgatgttaacgatggaaatgac 1611

                                                                        
Query: 196  aaatncatagccccaccactcagccagcggaacatancccgntccatagaanacgggggc 255
            |||| |||| |||||||||| |||||| |||||||| || |  || ||||| || || ||
Sbjct: 1610 aaatccatacccccaccactgagccagtggaacatagccagcaccgtagaagacaggagc 1551

                                                                        
Query: 256  tgaccctatgccataatgggtcaggccacccatgaggtttgaaaggaatgacataaccat 315
             ||||| || ||||| || || || |||||||||| |||||| |||||||| | ||||||
Sbjct: 1550 agacccaattccatagtgcgtgagtccacccatgatgtttgagaggaatgaaagaaccat 1491

                                                                        
Query: 316  ggcagcgaaaagcggaggggtgcccaaggcacttgccacagacaggaacgcagtgaacat 375
            |||||| |  || ||||| ||||||||||| || | ||| ||||  || |||||||||||
Sbjct: 1490 ggcagcaattagaggaggagtgcccaaggcgctggacactgacaaaaatgcagtgaacat 1431

                                                                        
Query: 376  cgctccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaagtacatnagcac 435
             ||||| ||||| || || ||||| |||||||| |||||||||||||||||||  |||||
Sbjct: 1430 tgctccaatgtgcgctgcgccactggcaaagaaatagtgggagtagaagtacagcagcac 1371

                                                                        
Query: 436  caatacaccgaatgagagttgccaggacagaccgagacctccaacaaacttaacaacagt 495
            ||| ||||| || || |||||||| || ||||| || || ||||||||||| ||||||||
Sbjct: 1370 caagacaccaaacgatagttgccatgagagaccaaggccaccaacaaacttcacaacagt 1311

                                                            
Query: 496  ctcgctgaaccaagaaatcaatccatatttgttgaggtagccagccat 543
            ||| ||||||||||| ||||| || |||||||||||||| ||||||||
Sbjct: 1310 ctcactgaaccaagagatcaacccgtatttgttgaggtatccagccat 1263
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>dbj|AK061957.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F09, full
            insert sequence
          Length = 1506

 Score =  321 bits (162), Expect = 1e-84
 Identities = 345/408 (84%)
 Strand = Plus / Minus

                                                                        
Query: 136  catnttccaccagaagcctccagcaccaagccagatgatgatgttaacaacggagatgac 195
            ||| |||||||||||||||||||||||||||||||||||||||||||| | ||| |||||
Sbjct: 1278 catcttccaccagaagcctccagcaccaagccagatgatgatgttaacgatggaaatgac 1219

                                                                        
Query: 196  aaatncatagccccaccactcagccagcggaacatancccgntccatagaanacgggggc 255
            |||| |||| |||||||||| |||||| |||||||| || |  || ||||| || || ||
Sbjct: 1218 aaatccatacccccaccactgagccagtggaacatagccagcaccgtagaagacaggagc 1159

                                                                        
Query: 256  tgaccctatgccataatgggtcaggccacccatgaggtttgaaaggaatgacataaccat 315
             ||||| || ||||| || || || |||||||||| |||||| |||||||| | ||||||
Sbjct: 1158 agacccaattccatagtgcgtgagtccacccatgatgtttgagaggaatgaaagaaccat 1099

                                                                        
Query: 316  ggcagcgaaaagcggaggggtgcccaaggcacttgccacagacaggaacgcagtgaacat 375
            |||||| |  || ||||| ||||||||||| || | ||| ||||  || |||||||||||
Sbjct: 1098 ggcagcaattagaggaggagtgcccaaggcgctggacactgacaaaaatgcagtgaacat 1039

                                                                        
Query: 376  cgctccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaagtacatnagcac 435
             ||||| ||||| || || ||||| |||||||| |||||||||||||||||||  |||||
Sbjct: 1038 tgctccaatgtgcgctgcgccactggcaaagaaatagtgggagtagaagtacagcagcac 979

                                                                        
Query: 436  caatacaccgaatgagagttgccaggacagaccgagacctccaacaaacttaacaacagt 495
            ||| ||||| || || |||||||| || ||||| || || ||||||||||| ||||||||
Sbjct: 978  caagacaccaaacgatagttgccatgagagaccaaggccaccaacaaacttcacaacagt 919

                                                            
Query: 496  ctcgctgaaccaagaaatcaatccatatttgttgaggtagccagccat 543
            ||| ||||||||||| ||||| || |||||||||||||| ||||||||
Sbjct: 918  ctcactgaaccaagagatcaacccgtatttgttgaggtatccagccat 871
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  254 bits (128), Expect = 3e-64
 Identities = 293/350 (83%)
 Strand = Plus / Minus

                                                                            
Query: 136      catnttccaccagaagcctccagcaccaagccagatgatgatgttaacaacggagatgac 195
                ||| |||||||||||||||||||||||||||||||||||||||||||| | ||| |||||
Sbjct: 20049343 catcttccaccagaagcctccagcaccaagccagatgatgatgttaacgatggaaatgac 20049284

                                                                            
Query: 196      aaatncatagccccaccactcagccagcggaacatancccgntccatagaanacgggggc 255
                |||| |||| |||||||||| |||||| |||||||| || |  || ||||| || || ||
Sbjct: 20049283 aaatccatacccccaccactgagccagtggaacatagccagcaccgtagaagacaggagc 20049224

                                                                            
Query: 256      tgaccctatgccataatgggtcaggccacccatgaggtttgaaaggaatgacataaccat 315
                 ||||| || ||||| || || || |||||||||| |||||| |||||||| | ||||||
Sbjct: 20049223 agacccaattccatagtgcgtgagtccacccatgatgtttgagaggaatgaaagaaccat 20049164

                                                                            
Query: 316      ggcagcgaaaagcggaggggtgcccaaggcacttgccacagacaggaacgcagtgaacat 375
                |||||| |  || ||||| ||||||||||| || | ||| ||||  || |||||||||||
Sbjct: 20049163 ggcagcaattagaggaggagtgcccaaggcgctggacactgacaaaaatgcagtgaacat 20049104

                                                                            
Query: 376      cgctccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaagtacatnagcac 435
                 ||||| ||||| || || ||||| |||||||| |||||||||||||||||||  |||||
Sbjct: 20049103 tgctccaatgtgcgctgcgccactggcaaagaaatagtgggagtagaagtacagcagcac 20049044

                                                                  
Query: 436      caatacaccgaatgagagttgccaggacagaccgagacctccaacaaact 485
                ||| ||||| || || |||||||| || ||||| || || ||||||||||
Sbjct: 20049043 caagacaccaaacgatagttgccatgagagaccaaggccaccaacaaact 20048994



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                        
Query: 488      acaacagtctcgctgaaccaagaaatcaatccatatttgttgaggtagccagccat 543
                ||||||||||| ||||||||||| ||||| || |||||||||||||| ||||||||
Sbjct: 20048386 acaacagtctcactgaaccaagagatcaacccgtatttgttgaggtatccagccat 20048331
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  254 bits (128), Expect = 3e-64
 Identities = 293/350 (83%)
 Strand = Plus / Minus

                                                                            
Query: 136      catnttccaccagaagcctccagcaccaagccagatgatgatgttaacaacggagatgac 195
                ||| |||||||||||||||||||||||||||||||||||||||||||| | ||| |||||
Sbjct: 19975557 catcttccaccagaagcctccagcaccaagccagatgatgatgttaacgatggaaatgac 19975498

                                                                            
Query: 196      aaatncatagccccaccactcagccagcggaacatancccgntccatagaanacgggggc 255
                |||| |||| |||||||||| |||||| |||||||| || |  || ||||| || || ||
Sbjct: 19975497 aaatccatacccccaccactgagccagtggaacatagccagcaccgtagaagacaggagc 19975438

                                                                            
Query: 256      tgaccctatgccataatgggtcaggccacccatgaggtttgaaaggaatgacataaccat 315
                 ||||| || ||||| || || || |||||||||| |||||| |||||||| | ||||||
Sbjct: 19975437 agacccaattccatagtgcgtgagtccacccatgatgtttgagaggaatgaaagaaccat 19975378

                                                                            
Query: 316      ggcagcgaaaagcggaggggtgcccaaggcacttgccacagacaggaacgcagtgaacat 375
                |||||| |  || ||||| ||||||||||| || | ||| ||||  || |||||||||||
Sbjct: 19975377 ggcagcaattagaggaggagtgcccaaggcgctggacactgacaaaaatgcagtgaacat 19975318

                                                                            
Query: 376      cgctccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaagtacatnagcac 435
                 ||||| ||||| || || ||||| |||||||| |||||||||||||||||||  |||||
Sbjct: 19975317 tgctccaatgtgcgctgcgccactggcaaagaaatagtgggagtagaagtacagcagcac 19975258

                                                                  
Query: 436      caatacaccgaatgagagttgccaggacagaccgagacctccaacaaact 485
                ||| ||||| || || |||||||| || ||||| || || ||||||||||
Sbjct: 19975257 caagacaccaaacgatagttgccatgagagaccaaggccaccaacaaact 19975208



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                        
Query: 488      acaacagtctcgctgaaccaagaaatcaatccatatttgttgaggtagccagccat 543
                ||||||||||| ||||||||||| ||||| || |||||||||||||| ||||||||
Sbjct: 19974600 acaacagtctcactgaaccaagagatcaacccgtatttgttgaggtatccagccat 19974545
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>emb|AL713900.4|CNS07YQ0 Oryza sativa chromosome 12, . BAC OJ1126_F07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 99791

 Score =  254 bits (128), Expect = 3e-64
 Identities = 293/350 (83%)
 Strand = Plus / Minus

                                                                         
Query: 136   catnttccaccagaagcctccagcaccaagccagatgatgatgttaacaacggagatgac 195
             ||| |||||||||||||||||||||||||||||||||||||||||||| | ||| |||||
Sbjct: 29505 catcttccaccagaagcctccagcaccaagccagatgatgatgttaacgatggaaatgac 29446

                                                                         
Query: 196   aaatncatagccccaccactcagccagcggaacatancccgntccatagaanacgggggc 255
             |||| |||| |||||||||| |||||| |||||||| || |  || ||||| || || ||
Sbjct: 29445 aaatccatacccccaccactgagccagtggaacatagccagcaccgtagaagacaggagc 29386

                                                                         
Query: 256   tgaccctatgccataatgggtcaggccacccatgaggtttgaaaggaatgacataaccat 315
              ||||| || ||||| || || || |||||||||| |||||| |||||||| | ||||||
Sbjct: 29385 agacccaattccatagtgcgtgagtccacccatgatgtttgagaggaatgaaagaaccat 29326

                                                                         
Query: 316   ggcagcgaaaagcggaggggtgcccaaggcacttgccacagacaggaacgcagtgaacat 375
             |||||| |  || ||||| ||||||||||| || | ||| ||||  || |||||||||||
Sbjct: 29325 ggcagcaattagaggaggagtgcccaaggcgctggacactgacaaaaatgcagtgaacat 29266

                                                                         
Query: 376   cgctccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaagtacatnagcac 435
              ||||| ||||| || || ||||| |||||||| |||||||||||||||||||  |||||
Sbjct: 29265 tgctccaatgtgcgctgcgccactggcaaagaaatagtgggagtagaagtacagcagcac 29206

                                                               
Query: 436   caatacaccgaatgagagttgccaggacagaccgagacctccaacaaact 485
             ||| ||||| || || |||||||| || ||||| || || ||||||||||
Sbjct: 29205 caagacaccaaacgatagttgccatgagagaccaaggccaccaacaaact 29156



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                     
Query: 488   acaacagtctcgctgaaccaagaaatcaatccatatttgttgaggtagccagccat 543
             ||||||||||| ||||||||||| ||||| || |||||||||||||| ||||||||
Sbjct: 28548 acaacagtctcactgaaccaagagatcaacccgtatttgttgaggtatccagccat 28493
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>dbj|AB190775.1| Mesembryanthemum crystallinum DCT1 mRNA for putative plastidic
            2-oxoglutarate/malate translocator, partial cds
          Length = 1719

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 161/200 (80%)
 Strand = Plus / Minus

                                                                        
Query: 344  gcacttgccacagacaggaacgcagtgaacatcgctccgatgtgtgcagcaccactagca 403
            |||||||| || || ||||| || |||||||| || || || |||||||| || || || 
Sbjct: 1058 gcacttgcaactgaaaggaaggctgtgaacatggcaccaatatgtgcagctccgcttgcg 999

                                                                        
Query: 404  aagaagtagtgggagtagaagtacatnagcaccaatacaccgaatgagagttgccaggac 463
            ||||||||||||||||||||||| |  || || |  | ||||||||| |||||||| || 
Sbjct: 998  aagaagtagtgggagtagaagtaaaggagaacaaggataccgaatgatagttgccatgaa 939

                                                                        
Query: 464  agaccgagacctccaacaaacttaacaacagtctcgctgaaccaagaaatcaatccatat 523
            || || | ||| ||||||||||||||||| || || |||||||| | ||| |  ||||| 
Sbjct: 938  agtcctaaaccaccaacaaacttaacaacggtttcactgaaccaggcaatgagaccatac 879

                                
Query: 524  ttgttgaggtagccagccat 543
            |||||||| || ||||||||
Sbjct: 878  ttgttgagatacccagccat 859



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                        
Query: 239  ccatagaanacgggggctgaccctatgccataatgggtcaggccacccatgaggtttgaa 298
            |||||||| || |||||||| || || || || ||||| ||||| ||||||||||| || 
Sbjct: 1163 ccatagaaaactggggctgaaccaataccgtagtgggtaaggccgcccatgaggttggac 1104

                   
Query: 299  aggaatg 305
            |||||||
Sbjct: 1103 aggaatg 1097
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>gb|U13238.1|SOU13238 Spinacia oleracea envelope membrane 2-oxoglutarate/malate
            translocator (SODiT1) mRNA, chloroplast mRNA encoding
            chloroplast protein, complete cds
          Length = 1934

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                        
Query: 344  gcacttgccacagacaggaacgcagtgaacatcgctccgatgtgtgcagcaccactagca 403
            |||||||| || || ||||| || |||||||| || || || |||||||| |||||||||
Sbjct: 1500 gcacttgcaactgaaaggaaggctgtgaacatggcaccaatatgtgcagctccactagca 1441

                                   
Query: 404  aagaagtagtgggagtagaagta 426
            ||||||||||| |||||||||||
Sbjct: 1440 aagaagtagtgagagtagaagta 1418
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>ref|NM_121289.3| Arabidopsis thaliana oxoglutarate:malate antiporter AT5G12860 mRNA,
            complete cds
          Length = 1946

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 365  gcagtgaacatcgctccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaag 424
            ||||||||||| || || ||||| ||||| |||||||||||||||||||| | |||||| 
Sbjct: 1461 gcagtgaacatagcaccaatgtgggcagctccactagcaaagaagtagtgagtgtagaaa 1402

                
Query: 425  taca 428
            ||||
Sbjct: 1401 taca 1398
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>emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, BAC clone T24H18 (ESSA project)
          Length = 90020

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                         
Query: 365   gcagtgaacatcgctccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaag 424
             ||||||||||| || || ||||| ||||| |||||||||||||||||||| | |||||| 
Sbjct: 11988 gcagtgaacatagcaccaatgtgggcagctccactagcaaagaagtagtgagtgtagaaa 12047

                 
Query: 425   taca 428
             ||||
Sbjct: 12048 taca 12051
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>gb|AF370494.1|AF370494 Arabidopsis thaliana 2-oxoglutarate/malate translocator
            precursor-like protein (T24H18.30) mRNA, complete cds
          Length = 1827

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 365  gcagtgaacatcgctccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaag 424
            ||||||||||| || || ||||| ||||| |||||||||||||||||||| | |||||| 
Sbjct: 1383 gcagtgaacatagcaccaatgtgggcagctccactagcaaagaagtagtgagtgtagaaa 1324

                
Query: 425  taca 428
            ||||
Sbjct: 1323 taca 1320
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>emb|BX831893.1|CNS0A11L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH37ZF03 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1842

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 365  gcagtgaacatcgctccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaag 424
            ||||||||||| || || ||||| ||||| |||||||||||||||||||| | |||||| 
Sbjct: 1499 gcagtgaacatagcaccaatgtgggcagctccactagcaaagaagtagtgagtgtagaaa 1440

                
Query: 425  taca 428
            ||||
Sbjct: 1439 taca 1436
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>emb|BX831583.1|CNS0A162 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH16ZF08 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1841

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 365  gcagtgaacatcgctccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaag 424
            ||||||||||| || || ||||| ||||| |||||||||||||||||||| | |||||| 
Sbjct: 1442 gcagtgaacatagcaccaatgtgggcagctccactagcaaagaagtagtgagtgtagaaa 1383

                
Query: 425  taca 428
            ||||
Sbjct: 1382 taca 1379
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>emb|BX833869.1|CNS0A0DK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL80ZD02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 769

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                       
Query: 365 gcagtgaacatcgctccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaag 424
           ||||||||||| || || ||||| ||||| |||||||||||||||||||| | |||||| 
Sbjct: 284 gcagtgaacatagcaccaatgtgggcagctccactagcaaagaagtagtgagtgtagaaa 225

               
Query: 425 taca 428
           ||||
Sbjct: 224 taca 221
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>emb|BX831984.1|CNS0A12U Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH43ZF10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 865

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 365 gcagtgaacatcgctccgatgtgtgcagcaccactagcaaagaagtagtg 414
           ||||||||||| || || ||||| ||||| ||||||||||||||||||||
Sbjct: 436 gcagtgaacatagcaccaatgtgggcagctccactagcaaagaagtagtg 387
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>gb|AY279308.1| Malus x domestica oxoglutarate/malate translocator-like mRNA,
           partial sequence
          Length = 419

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                       
Query: 239 ccatagaanacgggggctgaccctatgccataatgggtcaggccacccatgaggtttgaa 298
           |||||||| || || ||||| || ||||| |||||||| || |||||||||||||| || 
Sbjct: 98  ccatagaaaacaggtgctgatccaatgccgtaatgggtaagaccacccatgaggttggag 39

                  
Query: 299 aggaatg 305
           |||||||
Sbjct: 38  aggaatg 32
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>emb|BX830891.1|CNS0A0U0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS37ZB03 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1880

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 383  atgtgtgcagcaccactagcaaagaagtagtgggagtagaagtaca 428
            ||||| ||||| |||||||||||||||||||| | |||||| ||||
Sbjct: 1432 atgtgggcagctccactagcaaagaagtagtgagtgtagaaataca 1387



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 113/145 (77%)
 Strand = Plus / Minus

                                                                        
Query: 159  caccaagccagatgatgatgttaacaacggagatgacaaatncatagccccaccactcag 218
            |||||||||||||||  ||||| || |  ||||| |  ||| ||||||||||||| | ||
Sbjct: 1657 caccaagccagatgagaatgttgactattgagatcaggaatccatagccccaccatttag 1598

                                                                        
Query: 219  ccagcggaacatancccgntccatagaanacgggggctgaccctatgccataatgggtca 278
            ||||||| || ||    | ||| ||||| |  || || ||||| || |||||||||||||
Sbjct: 1597 ccagcggcacgtagttagctccgtagaagataggcgcagacccgataccataatgggtca 1538

                                     
Query: 279  ggccacccatgaggtttgaaaggaa 303
              || ||||| ||||| ||||||||
Sbjct: 1537 atcctcccatcaggttggaaaggaa 1513
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>emb|BX831708.1|CNS0A15V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH25ZB11 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1833

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 365  gcagtgaacatcgctccgatgtgtgcagcaccactagcaaagaagtagt 413
            ||||| ||||| || || ||||| ||||| |||||||||||||||||||
Sbjct: 1449 gcagttaacatagcaccaatgtgggcagctccactagcaaagaagtagt 1401
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 169     gatgatgatgttaacaacggag 190
               ||||||||||||||||||||||
Sbjct: 5575716 gatgatgatgttaacaacggag 5575695
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>gb|AC154681.2| Mus musculus BAC clone RP24-314G22 from chromosome 14, complete sequence
          Length = 193716

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 507    aagaaatcaatccatatttgtt 528
              ||||||||||||||||||||||
Sbjct: 115345 aagaaatcaatccatatttgtt 115366
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>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0081K20
          Length = 117287

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 169   gatgatgatgttaacaacggag 190
             ||||||||||||||||||||||
Sbjct: 88801 gatgatgatgttaacaacggag 88780
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>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0431A02
          Length = 165038

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 169   gatgatgatgttaacaacggag 190
             ||||||||||||||||||||||
Sbjct: 37408 gatgatgatgttaacaacggag 37387
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>gb|AC008325.5| Drosophila melanogaster clone BACR05M06, complete sequence
          Length = 166423

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 505    ccaagaaatcaatccatattt 525
              |||||||||||||||||||||
Sbjct: 161536 ccaagaaatcaatccatattt 161556
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>gb|AC110090.6| Mus musculus BAC clone RP23-27L4 from chromosome 1, complete sequence
          Length = 218518

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 335   gtgcccaaggcacttgccaca 355
             |||||||||||||||||||||
Sbjct: 99819 gtgcccaaggcacttgccaca 99839
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>gb|AE017157.1| Chlamydophila pneumoniae TW-183, section 1 of 4 of the complete genome
          Length = 300923

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 398    ctagcaaagaagtagtgggagtagaagta 426
              |||||||| | ||||||||||||||||||
Sbjct: 245750 ctagcaaaaaggtagtgggagtagaagta 245722
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>gb|AC110607.7| Homo sapiens chromosome 15, clone CTD-2632K10, complete sequence
          Length = 160452

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 204   agccccaccactcagccagcg 224
             |||||||||||||||||||||
Sbjct: 12214 agccccaccactcagccagcg 12194
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>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome
          Length = 1229853

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 398    ctagcaaagaagtagtgggagtagaagta 426
              |||||||| | ||||||||||||||||||
Sbjct: 592946 ctagcaaaaaggtagtgggagtagaagta 592974
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>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome
          Length = 1230230

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 398    ctagcaaagaagtagtgggagtagaagta 426
              |||||||| | ||||||||||||||||||
Sbjct: 248343 ctagcaaaaaggtagtgggagtagaagta 248315
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>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence
          Length = 1226565

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 398    ctagcaaagaagtagtgggagtagaagta 426
              |||||||| | ||||||||||||||||||
Sbjct: 247958 ctagcaaaaaggtagtgggagtagaagta 247930
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>gb|AE003609.4| Drosophila melanogaster chromosome 2L, section 18 of 83 of the complete
              sequence
          Length = 319287

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 505    ccaagaaatcaatccatattt 525
              |||||||||||||||||||||
Sbjct: 271775 ccaagaaatcaatccatattt 271795
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>ref|NM_123924.2| Arabidopsis thaliana lipid binding AT5G45560 mRNA, complete cds
          Length = 2540

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    actaaaagaatggatcatgt 20
            ||||||||||||||||||||
Sbjct: 1833 actaaaagaatggatcatgt 1852
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 80      cgccctcgtcgaaataggaagtcc 103
               ||||||||||||||||||| ||||
Sbjct: 1443551 cgccctcgtcgaaataggacgtcc 1443528
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>gb|AC007861.5| Homo sapiens chromosome 16 clone RP11-189E14, complete sequence
          Length = 175861

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 353   acagacaggaacgcagtgaacatc 376
             |||||||||||| |||||||||||
Sbjct: 43413 acagacaggaactcagtgaacatc 43436
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>gb|AC007607.6| Homo sapiens chromosome 16 clone RP11-369H7, complete sequence
          Length = 158941

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 353    acagacaggaacgcagtgaacatc 376
              |||||||||||| |||||||||||
Sbjct: 156047 acagacaggaactcagtgaacatc 156070
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>emb|AL603913.14| Mouse DNA sequence from clone RP23-103H9 on chromosome 11 Contains the
             gene for a novel protein (3732413I11Rik), a novel gene
             (4930597A21Rik), the 5' end of the Ebf1 gene for early
             B-cell factor 1, a novel gene and a CpG island, complete
             sequence
          Length = 215524

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   ggtgcccaaggcacttgcca 353
             ||||||||||||||||||||
Sbjct: 57884 ggtgcccaaggcacttgcca 57865
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>emb|BX897725.7| Zebrafish DNA sequence from clone CH211-244P18 in linkage group 20
              Contains the gene for a novel protein similar to vertebrate
              delta-like 4 (Drosophila) (DLL4), the vps18 gene for
              vacuolar protein sorting protein 18, the gene for a novel
              protein containing an SNF2 family N-terminal domain and a
              Helicase conserved C-terminal domain, the gene for a novel
              protein similar to vertebrate ras homolog gene family,
              member V (RHOV), the gene for a novel protein containing a
              ChaC-like protein domain and three CpG islands, complete
              sequence
          Length = 170125

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     ccacttgcaaatgttttgct 70
              ||||||||||||||||||||
Sbjct: 153015 ccacttgcaaatgttttgct 153034
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>gb|AY064989.1| Arabidopsis thaliana AT5g45560/MFC19_23 mRNA, complete cds
          Length = 2540

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    actaaaagaatggatcatgt 20
            ||||||||||||||||||||
Sbjct: 1833 actaaaagaatggatcatgt 1852
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>dbj|AB022213.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2N11
          Length = 30340

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    actaaaagaatggatcatgt 20
            ||||||||||||||||||||
Sbjct: 4179 actaaaagaatggatcatgt 4198
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>gb|AC154260.2| Mus musculus BAC clone RP24-225C5 from 17, complete sequence
          Length = 187652

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 497    tcgctgaaccaagaaatcaa 516
              ||||||||||||||||||||
Sbjct: 121623 tcgctgaaccaagaaatcaa 121604
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>gb|AC006499.13|AC006499 Homo sapiens chromosome 4 clone C0494H11, complete sequence
          Length = 195384

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   cagaagcctccagcaccaag 165
             ||||||||||||||||||||
Sbjct: 26195 cagaagcctccagcaccaag 26214
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>emb|AL929049.4| Zebrafish DNA sequence from clone DKEY-14A13 in linkage group 20,
              complete sequence
          Length = 223182

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     ccacttgcaaatgttttgct 70
              ||||||||||||||||||||
Sbjct: 160254 ccacttgcaaatgttttgct 160273


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,558,776
Number of Sequences: 3902068
Number of extensions: 3558776
Number of successful extensions: 61215
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61043
Number of HSP's gapped (non-prelim): 169
length of query: 546
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 523
effective length of database: 17,143,297,704
effective search space: 8965944699192
effective search space used: 8965944699192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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