| Clone Name | rbaal15i11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009586.1| Triticum aestivum clone wre1n.pk0047.b2:fis, full insert mRNA sequence Length = 890 Score = 755 bits (381), Expect = 0.0 Identities = 456/479 (95%), Gaps = 14/479 (2%) Strand = Plus / Minus Query: 272 ccctatcatcaactagca---caaatcttggaatcgccgaaccggaaataaaattacagc 328 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 590 ccctatcatcaactagcagcacaaatcttggaatcgccaaaccggaaataaaattacagc 531 Query: 329 aggca---ccctcctttcaccacaaccacc---ctggaagaaaactctggctccgggaca 382 ||||| ||||||||||||||| |||||| |||||||||||||| |||||||||||| Sbjct: 530 aggcatcaccctcctttcaccaccaccaccaccctggaagaaaactcaggctccgggaca 471 Query: 383 tggaggcctctggaggcctaatcaaacatcaaactggattagcaatgcag-----aatca 437 ||||||||||||||||||||||| | |||||||||||||||||||||||| ||||| Sbjct: 470 tggaggcctctggaggcctaatcgaccatcaaactggattagcaatgcagtgcacaatca 411 Query: 438 cagagcactatgagtctaccatctcgtcttgcaattcgctaggggcaatcagccctggga 497 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 410 cagagcactatgagtctaccatctcatcttgcaattcgcttggggcaatcagccctggga 351 Query: 498 tggcaagcatccgttgcctttccttttctctttgtaccgcagcctcttccgcatacagat 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 tggcaagcatccgttgcctttccttttctctttgtaccgcagcctcttccgcatacagat 291 Query: 558 ccttgttatcctgggctgagaactcctttgattgcaccaggaagtccctaatatggtttt 617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 ccttgttatcctgggctgagaactcctttgattgcaccaggaagtccctaatatggtttt 231 Query: 618 tgaagcttgggaggtcatgtctcgaaccaaggagcccatcaacaaacttggtcacctcag 677 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 tgaagcttgggaggtcatgtctcgaaccaaggagcccatcaacaaacttggtcacctcag 171 Query: 678 ctaccgtcatgttaggaaatgatgccccaagaagtttgattgtgtagtcccgtacaaac 736 || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 170 ctgccgtcatgttaggaaatgatgctccaagaagtttgattgtgtagtcccgtacaaac 112 Score = 226 bits (114), Expect = 8e-56 Identities = 132/137 (96%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 80 catcntaatacagtcatcaaatctatagactaaactaacaattaaggatcaacatccata 139 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 catcataatacagtcatcaaatctatagactaaactaacaattaaggatcaacatccata 705 Query: 140 ctatatcatgctcagcacacgcacaaaatgtttcaccgagcacttaaaacacatccatct 199 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 704 ctatatcatgctcagcacacgcacaaaatgtttcaccgagcac-taaaacacatccatct 646 Query: 200 aaccatccacacagccc 216 | ||| ||| ||||||| Sbjct: 645 agccaaccaaacagccc 629
>ref|XM_470491.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3679 Score = 254 bits (128), Expect = 4e-64 Identities = 275/323 (85%), Gaps = 2/323 (0%) Strand = Plus / Minus Query: 414 aactggattagcaatgcagaatcacagagcactatgagtctaccatctcgtcttgcaatt 473 |||||||||||||| || |||||||||| | ||||| || |||||||| ||||| |||| Sbjct: 3242 aactggattagcaaggctgaatcacaga--attatgaatcaaccatctcatcttgtaatt 3185 Query: 474 cgctaggggcaatcagccctgggatggcaagcatccgttgcctttccttttctctttgta 533 |||| |||||||| |||||||| ||||||||||| ||||| | ||| | ||||||||| Sbjct: 3184 cgcttggggcaataagccctggaatggcaagcattcgttgacgctccctctctctttgtg 3125 Query: 534 ccgcagcctcttccgcatacagatccttgttatcctgggctgagaactcctttgattgca 593 | ||||||||||| ||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 3124 cagcagcctcttcagcatacaaatccttattatcctgagccgagaactcctttgattgca 3065 Query: 594 ccaggaagtccctaatatggtttttgaagcttgggaggtcatgtctcgaaccaaggagcc 653 ||||||| |||||||||||||||||||||||||| ||||||||| | |||| ||| |||| Sbjct: 3064 ccaggaaatccctaatatggtttttgaagcttggaaggtcatgttttgaactaagaagcc 3005 Query: 654 catcaacaaacttggtcacctcagctaccgtcatgttaggaaatgatgccccaagaagtt 713 |||||||||| || || ||||||| |||||||| |||||||||| || | ||||| Sbjct: 3004 catcaacaaattttgtaacctcagtaggtgtcatgttgggaaatgatgaacctaaaagtt 2945 Query: 714 tgattgtgtagtcccgtacaaac 736 | |||||||| || || |||||| Sbjct: 2944 ttattgtgtaatctcggacaaac 2922 Score = 50.1 bits (25), Expect = 0.010 Identities = 38/41 (92%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 308 aaccggaaataaaattacagcaggcaccctcctttcaccac 348 ||||| |||||||||||||||||||| ||| |||||||||| Sbjct: 3350 aaccgaaaataaaattacagcaggca-ccttctttcaccac 3311
>dbj|AK100745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118H18, full insert sequence Length = 3882 Score = 254 bits (128), Expect = 4e-64 Identities = 275/323 (85%), Gaps = 2/323 (0%) Strand = Plus / Minus Query: 414 aactggattagcaatgcagaatcacagagcactatgagtctaccatctcgtcttgcaatt 473 |||||||||||||| || |||||||||| | ||||| || |||||||| ||||| |||| Sbjct: 3479 aactggattagcaaggctgaatcacaga--attatgaatcaaccatctcatcttgtaatt 3422 Query: 474 cgctaggggcaatcagccctgggatggcaagcatccgttgcctttccttttctctttgta 533 |||| |||||||| |||||||| ||||||||||| ||||| | ||| | ||||||||| Sbjct: 3421 cgcttggggcaataagccctggaatggcaagcattcgttgacgctccctctctctttgtg 3362 Query: 534 ccgcagcctcttccgcatacagatccttgttatcctgggctgagaactcctttgattgca 593 | ||||||||||| ||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 3361 cagcagcctcttcagcatacaaatccttattatcctgagccgagaactcctttgattgca 3302 Query: 594 ccaggaagtccctaatatggtttttgaagcttgggaggtcatgtctcgaaccaaggagcc 653 ||||||| |||||||||||||||||||||||||| ||||||||| | |||| ||| |||| Sbjct: 3301 ccaggaaatccctaatatggtttttgaagcttggaaggtcatgttttgaactaagaagcc 3242 Query: 654 catcaacaaacttggtcacctcagctaccgtcatgttaggaaatgatgccccaagaagtt 713 |||||||||| || || ||||||| |||||||| |||||||||| || | ||||| Sbjct: 3241 catcaacaaattttgtaacctcagtaggtgtcatgttgggaaatgatgaacctaaaagtt 3182 Query: 714 tgattgtgtagtcccgtacaaac 736 | |||||||| || || |||||| Sbjct: 3181 ttattgtgtaatctcggacaaac 3159 Score = 50.1 bits (25), Expect = 0.010 Identities = 38/41 (92%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 308 aaccggaaataaaattacagcaggcaccctcctttcaccac 348 ||||| |||||||||||||||||||| ||| |||||||||| Sbjct: 3587 aaccgaaaataaaattacagcaggca-ccttctttcaccac 3548
>dbj|AK072679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136O19, full insert sequence Length = 1597 Score = 254 bits (128), Expect = 4e-64 Identities = 275/323 (85%), Gaps = 2/323 (0%) Strand = Plus / Minus Query: 414 aactggattagcaatgcagaatcacagagcactatgagtctaccatctcgtcttgcaatt 473 |||||||||||||| || |||||||||| | ||||| || |||||||| ||||| |||| Sbjct: 1186 aactggattagcaaggctgaatcacaga--attatgaatcaaccatctcatcttgtaatt 1129 Query: 474 cgctaggggcaatcagccctgggatggcaagcatccgttgcctttccttttctctttgta 533 |||| |||||||| |||||||| ||||||||||| ||||| | ||| | ||||||||| Sbjct: 1128 cgcttggggcaataagccctggaatggcaagcattcgttgacgctccctctctctttgtg 1069 Query: 534 ccgcagcctcttccgcatacagatccttgttatcctgggctgagaactcctttgattgca 593 | ||||||||||| ||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 1068 cagcagcctcttcagcatacaaatccttattatcctgagccgagaactcctttgattgca 1009 Query: 594 ccaggaagtccctaatatggtttttgaagcttgggaggtcatgtctcgaaccaaggagcc 653 ||||||| |||||||||||||||||||||||||| ||||||||| | |||| ||| |||| Sbjct: 1008 ccaggaaatccctaatatggtttttgaagcttggaaggtcatgttttgaactaagaagcc 949 Query: 654 catcaacaaacttggtcacctcagctaccgtcatgttaggaaatgatgccccaagaagtt 713 |||||||||| || || ||||||| |||||||| |||||||||| || | ||||| Sbjct: 948 catcaacaaattttgtaacctcagtaggtgtcatgttgggaaatgatgaacctaaaagtt 889 Query: 714 tgattgtgtagtcccgtacaaac 736 | |||||||| || || |||||| Sbjct: 888 ttattgtgtaatctcggacaaac 866 Score = 50.1 bits (25), Expect = 0.010 Identities = 38/41 (92%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 308 aaccggaaataaaattacagcaggcaccctcctttcaccac 348 ||||| |||||||||||||||||||| ||| |||||||||| Sbjct: 1294 aaccgaaaataaaattacagcaggca-ccttctttcaccac 1255
>gb|AY109392.1| Zea mays CL1001_1 mRNA sequence Length = 2488 Score = 206 bits (104), Expect = 8e-50 Identities = 219/259 (84%) Strand = Plus / Plus Query: 443 cactatgagtctaccatctcgtcttgcaattcgctaggggcaatcagccctgggatggca 502 ||||| || |||||||||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 571 cactacgaatctaccatctcgtcttgcaactcgctaggggcaatgagccccggaatggca 630 Query: 503 agcatccgttgcctttccttttctctttgtaccgcagcctcttccgcatacagatccttg 562 ||||| ||||| | ||| | |||||||| | |||||||||||||| || ||||||||| Sbjct: 631 agcatacgttggcgctccctctctctttgggcagcagcctcttccgcgtatagatccttg 690 Query: 563 ttatcctgggctgagaactcctttgattgcaccaggaagtccctaatatggtttttgaag 622 |||||||| ||||||||||||| || |||||||||||||| ||||||||| |||| Sbjct: 691 ttatcctgaactgagaactccttggactgcaccaggaagtctctaatatggnnnnngaag 750 Query: 623 cttgggaggtcatgtctcgaaccaaggagcccatcaacaaacttggtcacctcagctacc 682 ||||| || ||| || | |||| ||| || ||||| |||||||| |||||||| | ||| Sbjct: 751 cttggaagatcaagttttgaactaagaagaccatctacaaactttgtcacctcggttact 810 Query: 683 gtcatgttaggaaatgatg 701 ||||||||||||||||||| Sbjct: 811 gtcatgttaggaaatgatg 829
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 575 gagaactcctttgattgcaccaggaagtccctaatatggtttttgaagcttgggaggtca 634 |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 35909890 gagaactcctttgattgcaccaggaaatccctaatatggtttttgaagcttggaaggtca 35909949 Query: 635 tgtctcgaaccaaggagcccatcaacaaa 663 ||| | |||| ||| |||||||||||||| Sbjct: 35909950 tgttttgaactaagaagcccatcaacaaa 35909978 Score = 121 bits (61), Expect = 3e-24 Identities = 133/156 (85%), Gaps = 2/156 (1%) Strand = Plus / Plus Query: 414 aactggattagcaatgcagaatcacagagcactatgagtctaccatctcgtcttgcaatt 473 |||||||||||||| || |||||||||| | ||||| || |||||||| ||||| |||| Sbjct: 35909289 aactggattagcaaggctgaatcacaga--attatgaatcaaccatctcatcttgtaatt 35909346 Query: 474 cgctaggggcaatcagccctgggatggcaagcatccgttgcctttccttttctctttgta 533 |||| |||||||| |||||||| ||||||||||| ||||| | ||| | ||||||||| Sbjct: 35909347 cgcttggggcaataagccctggaatggcaagcattcgttgacgctccctctctctttgtg 35909406 Query: 534 ccgcagcctcttccgcatacagatccttgttatcct 569 | ||||||||||| ||||||| |||||| ||||||| Sbjct: 35909407 cagcagcctcttcagcatacaaatccttattatcct 35909442 Score = 50.1 bits (25), Expect = 0.010 Identities = 38/41 (92%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 308 aaccggaaataaaattacagcaggcaccctcctttcaccac 348 ||||| |||||||||||||||||||| ||| |||||||||| Sbjct: 35909181 aaccgaaaataaaattacagcaggca-ccttctttcaccac 35909220 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 685 catgttaggaaatgatgcccc 705 ||||||||||||||||||||| Sbjct: 31760958 catgttaggaaatgatgcccc 31760978 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 acacatccatctaaccatccacaca 212 ||||||||||||| ||||||||||| Sbjct: 13143748 acacatccatctatccatccacaca 13143772
>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete sequence Length = 145115 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Minus Query: 575 gagaactcctttgattgcaccaggaagtccctaatatggtttttgaagcttgggaggtca 634 |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 51235 gagaactcctttgattgcaccaggaaatccctaatatggtttttgaagcttggaaggtca 51176 Query: 635 tgtctcgaaccaaggagcccatcaacaaa 663 ||| | |||| ||| |||||||||||||| Sbjct: 51175 tgttttgaactaagaagcccatcaacaaa 51147 Score = 121 bits (61), Expect = 3e-24 Identities = 133/156 (85%), Gaps = 2/156 (1%) Strand = Plus / Minus Query: 414 aactggattagcaatgcagaatcacagagcactatgagtctaccatctcgtcttgcaatt 473 |||||||||||||| || |||||||||| | ||||| || |||||||| ||||| |||| Sbjct: 51836 aactggattagcaaggctgaatcacaga--attatgaatcaaccatctcatcttgtaatt 51779 Query: 474 cgctaggggcaatcagccctgggatggcaagcatccgttgcctttccttttctctttgta 533 |||| |||||||| |||||||| ||||||||||| ||||| | ||| | ||||||||| Sbjct: 51778 cgcttggggcaataagccctggaatggcaagcattcgttgacgctccctctctctttgtg 51719 Query: 534 ccgcagcctcttccgcatacagatccttgttatcct 569 | ||||||||||| ||||||| |||||| ||||||| Sbjct: 51718 cagcagcctcttcagcatacaaatccttattatcct 51683 Score = 50.1 bits (25), Expect = 0.010 Identities = 38/41 (92%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 308 aaccggaaataaaattacagcaggcaccctcctttcaccac 348 ||||| |||||||||||||||||||| ||| |||||||||| Sbjct: 51944 aaccgaaaataaaattacagcaggca-ccttctttcaccac 51905
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 575 gagaactcctttgattgcaccaggaagtccctaatatggtttttgaagcttgggaggtca 634 |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 36000020 gagaactcctttgattgcaccaggaaatccctaatatggtttttgaagcttggaaggtca 36000079 Query: 635 tgtctcgaaccaaggagcccatcaacaaa 663 ||| | |||| ||| |||||||||||||| Sbjct: 36000080 tgttttgaactaagaagcccatcaacaaa 36000108 Score = 121 bits (61), Expect = 3e-24 Identities = 133/156 (85%), Gaps = 2/156 (1%) Strand = Plus / Plus Query: 414 aactggattagcaatgcagaatcacagagcactatgagtctaccatctcgtcttgcaatt 473 |||||||||||||| || |||||||||| | ||||| || |||||||| ||||| |||| Sbjct: 35999419 aactggattagcaaggctgaatcacaga--attatgaatcaaccatctcatcttgtaatt 35999476 Query: 474 cgctaggggcaatcagccctgggatggcaagcatccgttgcctttccttttctctttgta 533 |||| |||||||| |||||||| ||||||||||| ||||| | ||| | ||||||||| Sbjct: 35999477 cgcttggggcaataagccctggaatggcaagcattcgttgacgctccctctctctttgtg 35999536 Query: 534 ccgcagcctcttccgcatacagatccttgttatcct 569 | ||||||||||| ||||||| |||||| ||||||| Sbjct: 35999537 cagcagcctcttcagcatacaaatccttattatcct 35999572 Score = 50.1 bits (25), Expect = 0.010 Identities = 38/41 (92%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 308 aaccggaaataaaattacagcaggcaccctcctttcaccac 348 ||||| |||||||||||||||||||| ||| |||||||||| Sbjct: 35999311 aaccgaaaataaaattacagcaggca-ccttctttcaccac 35999350 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 685 catgttaggaaatgatgcccc 705 ||||||||||||||||||||| Sbjct: 31851474 catgttaggaaatgatgcccc 31851494 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 acacatccatctaaccatccacaca 212 ||||||||||||| ||||||||||| Sbjct: 13140523 acacatccatctatccatccacaca 13140547
>gb|AC144806.10| Medicago truncatula clone mth2-34h22, complete sequence Length = 124550 Score = 93.7 bits (47), Expect = 8e-16 Identities = 107/127 (84%) Strand = Plus / Plus Query: 445 ctatgagtctaccatctcgtcttgcaattcgctaggggcaatcagccctgggatggcaag 504 ||||||||| ||||| || |||||||| ||| | ||||||||||||||||| || | ||| Sbjct: 51640 ctatgagtccaccatttcatcttgcaactcgattggggcaatcagccctggaatagaaag 51699 Query: 505 catccgttgcctttccttttctctttgtaccgcagcctcttccgcatacagatccttgtt 564 ||| | ||||| ||| ||||||| || ||||||||||||| ||||| ||||| ||||| Sbjct: 51700 cattctttgccgttctctttctctctgagccgcagcctcttcagcatagagatctttgtt 51759 Query: 565 atcctgg 571 ||||||| Sbjct: 51760 atcctgg 51766
>gb|AY731575.1| Arachis hypogaea clone PM421 microsatellite sequence Length = 355 Score = 48.1 bits (24), Expect = 0.041 Identities = 42/48 (87%) Strand = Plus / Minus Query: 445 ctatgagtctaccatctcgtcttgcaattcgctaggggcaatcagccc 492 |||||| || ||||| || |||||||||||||| |||||||| ||||| Sbjct: 281 ctatgaatccaccatttcatcttgcaattcgctcggggcaataagccc 234
>emb|AL353803.23| Human DNA sequence from clone RP11-65J3 on chromosome 9 Contains three novel genes, the 5' end of a novel gene, a novel pseudogene and seven CpG islands, complete sequence Length = 165696 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 377 gggacatggaggcctctggagg 398 |||||||||||||||||||||| Sbjct: 156385 gggacatggaggcctctggagg 156406
>gb|BC036799.1| Homo sapiens, clone IMAGE:5590162, mRNA Length = 2035 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 377 gggacatggaggcctctggagg 398 |||||||||||||||||||||| Sbjct: 1727 gggacatggaggcctctggagg 1706
>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07, from chromosome 3, complete sequence Length = 151173 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 188 acacatccatctaaccatccacaca 212 ||||||||||||| ||||||||||| Sbjct: 82890 acacatccatctatccatccacaca 82866
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete sequence Length = 134496 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 685 catgttaggaaatgatgcccc 705 ||||||||||||||||||||| Sbjct: 86184 catgttaggaaatgatgcccc 86204
>emb|BX539313.4| Zebrafish DNA sequence from clone DKEYP-84F3 in linkage group 16, complete sequence Length = 215158 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 512 tgcctttccttttctctttgt 532 ||||||||||||||||||||| Sbjct: 23799 tgcctttccttttctctttgt 23819
>emb|CR318586.3| Zebrafish DNA sequence from clone CH211-239O22 in linkage group 7, complete sequence Length = 30205 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 atccatctaaccatccacaca 212 ||||||||||||||||||||| Sbjct: 16520 atccatctaaccatccacaca 16500
>emb|AL732455.6| Zebrafish DNA sequence from clone CH211-225J17 in linkage group 7, complete sequence Length = 192578 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 atccatctaaccatccacaca 212 ||||||||||||||||||||| Sbjct: 49523 atccatctaaccatccacaca 49543
>emb|CT476810.5| Zebrafish DNA sequence from clone ZFOS-260D6 in linkage group 7, complete sequence Length = 19313 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 atccatctaaccatccacaca 212 ||||||||||||||||||||| Sbjct: 2794 atccatctaaccatccacaca 2814 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,476,361 Number of Sequences: 3902068 Number of extensions: 6476361 Number of successful extensions: 120612 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 120366 Number of HSP's gapped (non-prelim): 234 length of query: 736 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 713 effective length of database: 17,143,297,704 effective search space: 12223171262952 effective search space used: 12223171262952 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)