ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal15i07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106353.1| Zea mays PCO068301 mRNA sequence Length = 727 Score = 305 bits (154), Expect = 9e-80 Identities = 319/370 (86%), Gaps = 3/370 (0%) Strand = Plus / Minus Query: 199 gtcagcccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggt 258 |||||||||| || || ||||| ||||||||||| || || || || |||||| | || | Sbjct: 589 gtcagcccattgcatatttctgagtccagctcctagcagtagattcgtacttcacgcgat 530 Query: 259 cgctcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 | ||||||||| ||| |||||||| ||||||||||| ||||| |||||||||||||| | Sbjct: 529 cagtcttgtacaagtgagcaatctctgggaccaacggatcgtcagggtttgggtccgtca 470 Query: 319 gtagagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctc 378 | || || || ||| || ||||| ||||| || ||||||| |||||||||||||| |||| Sbjct: 469 gaagggaacaaatt-gagaggaggaccttagaaactgtcagtgcagggctccatt-gctc 412 Query: 379 cttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttg 438 |||||||||||||||||||||||| || |||||||||||||| |||||| ||||||| | Sbjct: 411 cttcaagatatcaagacagatgctcccgttgctgttgatattcgggtggtaaaccttc-g 353 Query: 439 ttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaacca 498 | || ||||||||||| ||||| ||||||||||||||||| |||||||||||||| |||| Sbjct: 352 tcttgaatgcaaccttcggtggtttgaatgggtagtccggtggaaagtgaatagtgacca 293 Query: 499 aaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtgga 558 ||||||| |||||||| |||||||| || ||||| ||||| |||||||| ||||||| || Sbjct: 292 aaaatacgccaccagcgtatgggctatctgatggccccataatcgtcgcctgccagtaga 233 Query: 559 acatatcttc 568 |||||||||| Sbjct: 232 acatatcttc 223
>gb|BT017507.1| Zea mays clone EL01N0417C02.c mRNA sequence Length = 727 Score = 297 bits (150), Expect = 2e-77 Identities = 318/370 (85%), Gaps = 3/370 (0%) Strand = Plus / Minus Query: 199 gtcagcccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggt 258 |||||||||| || || ||||| ||||||||||| || || || || |||||| | || | Sbjct: 551 gtcagcccattgcatatttctgagtccagctcctagcagtagattcgtacttcacgcgat 492 Query: 259 cgctcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 | ||||||||| ||| |||||||| ||||||||||| ||||| |||||||||||||| | Sbjct: 491 cagtcttgtacaagtgagcaatctctgggaccaacggatcgtcagggtttgggtccgtca 432 Query: 319 gtagagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctc 378 | || || || ||| || ||||| ||||| || ||||||| |||||||||||||| |||| Sbjct: 431 gaagggaacaaatt-gagaggaggaccttagaaactgtcagtgcagggctccatt-gctc 374 Query: 379 cttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttg 438 |||||||||||||||||||||||| || |||||||||||||| || ||| ||||||| | Sbjct: 373 cttcaagatatcaagacagatgctcccgttgctgttgatattcggatggtaaaccttc-g 315 Query: 439 ttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaacca 498 | || ||||||||||| ||||| ||||||||||||||||| |||||||||||||| |||| Sbjct: 314 tcttgaatgcaaccttcggtggtttgaatgggtagtccggtggaaagtgaatagtgacca 255 Query: 499 aaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtgga 558 ||||||| |||||||| |||||||| || ||||| ||||| |||||||| ||||||| || Sbjct: 254 aaaatacgccaccagcgtatgggctatctgatggccccataatcgtcgcctgccagtaga 195 Query: 559 acatatcttc 568 |||||||||| Sbjct: 194 acatatcttc 185
>ref|XM_464900.1| Oryza sativa (japonica cultivar-group), mRNA Length = 728 Score = 210 bits (106), Expect = 4e-51 Identities = 318/385 (82%), Gaps = 3/385 (0%) Strand = Plus / Minus Query: 202 agcccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgc 261 ||||||| || || ||||||||||||||||| || |||||||| ||||| || || || Sbjct: 480 agcccatagcatatttctgggtccagctccttgcggtggactcgtacttggcccgatcag 421 Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||||||||| |||||||| || ||||| || || || || ||||| ||||| | | Sbjct: 420 tcttgtacatgtgagcaatctctggaaccaatggatcatcaggatttggatccgtcaaca 361 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 | ||||| ||| || || ||||||||||| | ||||||||||| ||||| | ||||||| Sbjct: 360 gcgagcaaatt-gagagtagcacctttgaaatagtcaatgcaggactccact-gctcctt 303 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttt 441 |||||||||||| || |||||||| ||||| || || ||||||||||| |||||| || | Sbjct: 302 caagatatcaaggcatatgcttccgttgctattaatgtttgggtggaacaccttt-gtct 244 Query: 442 taaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaa 501 | ||||| ||||| || || |||||||| || || || ||||| ||||| |||||||||| Sbjct: 243 tcaatgccaccttaggcggtttgaatggataatcaggaggaaaatgaatggtaaccaaaa 184 Query: 502 atacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaaca 561 | || || |||||||| ||||| || ||||||||||| | || || ||||||||||||| Sbjct: 183 acacgcctccagcataagggctatctgatggacccatcagtgttgcctgccagtggaaca 124 Query: 562 tatcttctgccacangaccggcgct 586 |||||||||||||| | |||||||| Sbjct: 123 tatcttctgccacagggccggcgct 99
>dbj|AK121248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101B08, full insert sequence Length = 729 Score = 210 bits (106), Expect = 4e-51 Identities = 318/385 (82%), Gaps = 3/385 (0%) Strand = Plus / Minus Query: 202 agcccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgc 261 ||||||| || || ||||||||||||||||| || |||||||| ||||| || || || Sbjct: 480 agcccatagcatatttctgggtccagctccttgcggtggactcgtacttggcccgatcag 421 Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||||||||| |||||||| || ||||| || || || || ||||| ||||| | | Sbjct: 420 tcttgtacatgtgagcaatctctggaaccaatggatcatcaggatttggatccgtcaaca 361 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 | ||||| ||| || || ||||||||||| | ||||||||||| ||||| | ||||||| Sbjct: 360 gcgagcaaatt-gagagtagcacctttgaaatagtcaatgcaggactccact-gctcctt 303 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttt 441 |||||||||||| || |||||||| ||||| || || ||||||||||| |||||| || | Sbjct: 302 caagatatcaaggcatatgcttccgttgctattaatgtttgggtggaacaccttt-gtct 244 Query: 442 taaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaa 501 | ||||| ||||| || || |||||||| || || || ||||| ||||| |||||||||| Sbjct: 243 tcaatgccaccttaggcggtttgaatggataatcaggaggaaaatgaatggtaaccaaaa 184 Query: 502 atacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaaca 561 | || || |||||||| ||||| || ||||||||||| | || || ||||||||||||| Sbjct: 183 acacgcctccagcataagggctatctgatggacccatcagtgttgcctgccagtggaaca 124 Query: 562 tatcttctgccacangaccggcgct 586 |||||||||||||| | |||||||| Sbjct: 123 tatcttctgccacagggccggcgct 99
>dbj|AB074412.1| Oryza sativa (japonica cultivar-group) mRNA for ubiquitin-conjugating enzyme OsUBC5b, complete cds Length = 574 Score = 210 bits (106), Expect = 4e-51 Identities = 318/385 (82%), Gaps = 3/385 (0%) Strand = Plus / Minus Query: 202 agcccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgc 261 ||||||| || || ||||||||||||||||| || |||||||| ||||| || || || Sbjct: 476 agcccatagcatatttctgggtccagctccttgcggtggactcgtacttggcccgatcag 417 Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||||||||| |||||||| || ||||| || || || || ||||| ||||| | | Sbjct: 416 tcttgtacatgtgagcaatctctggaaccaatggatcatcaggatttggatccgtcaaca 357 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 | ||||| ||| || || ||||||||||| | ||||||||||| ||||| | ||||||| Sbjct: 356 gcgagcaaatt-gagagtagcacctttgaaatagtcaatgcaggactccact-gctcctt 299 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttt 441 |||||||||||| || |||||||| ||||| || || ||||||||||| |||||| || | Sbjct: 298 caagatatcaaggcatatgcttccgttgctattaatgtttgggtggaacaccttt-gtct 240 Query: 442 taaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaa 501 | ||||| ||||| || || |||||||| || || || ||||| ||||| |||||||||| Sbjct: 239 tcaatgccaccttaggcggtttgaatggataatcaggaggaaaatgaatggtaaccaaaa 180 Query: 502 atacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaaca 561 | || || |||||||| ||||| || ||||||||||| | || || ||||||||||||| Sbjct: 179 acacgcctccagcataagggctatctgatggacccatcagtgttgcctgccagtggaaca 120 Query: 562 tatcttctgccacangaccggcgct 586 |||||||||||||| | |||||||| Sbjct: 119 tatcttctgccacagggccggcgct 95
>ref|NM_191107.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 147 bits (74), Expect = 5e-32 Identities = 293/362 (80%), Gaps = 3/362 (0%) Strand = Plus / Minus Query: 204 cccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctc 263 ||||| || ||||||||||||||||| | ||||| | ||||||||| | ||| || || Sbjct: 443 cccatggcatacttctgggtccagctgcgggctgtcgtctcatactttggacgatccgtc 384 Query: 264 ttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagtaga 323 ||||||||||| |||||||| ||||| | |||||||| ||||| ||||| || || || Sbjct: 383 ttgtacatgtgggcaatctcagggacaagagggtcgtccgggttggggtcagtgagcagc 324 Query: 324 gagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctccttca 383 ||||||| | ||||| | |||||| || | |||||| ||||||||||| ||||||||| | Sbjct: 323 gagcaga-tcgaaagcaacaccttagaaattgtcaaagcagggctcca-ttgctccttaa 266 Query: 384 agatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgtttta 443 || ||||| || |||||||||||||| ||||| ||||| ||||| ||| ||||| || Sbjct: 265 gaatgtcaaggcatatgcttccattgctattgatgtttggatggaagacc-tttgtcttg 207 Query: 444 aatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaat 503 || | ||||| || |||||||| |||||||||||||| || |||||| | || || || Sbjct: 206 aaagatacctttggaggcttgaaggggtagtccggggggaaatgaatattcactaagaaa 147 Query: 504 acaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacata 563 || ||||||||||| || || || | |||||||| || ||||| ||||| ||||||||| Sbjct: 146 actccaccagcatagggactatctggaggacccataatggtcgcctgccaatggaacata 87 Query: 564 tc 565 || Sbjct: 86 tc 85
>emb|X73419.1|LEUBC L.esculentum mRNA for ubiquitin conjugating enzyme E2 Length = 686 Score = 137 bits (69), Expect = 5e-29 Identities = 249/305 (81%), Gaps = 3/305 (0%) Strand = Plus / Minus Query: 264 ttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagtaga 323 |||||||| || ||||||||||| ||||| ||||| ||||| || ||||| || || ||| Sbjct: 395 ttgtacatatgagcaatctccggcaccaaagggtcatcgggattagggtctgtcagcaga 336 Query: 324 gagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctccttca 383 || ||||| || || || ||||| || | || | |||||||||||| | | ||||||| Sbjct: 335 gaacagata-gagagcagtaccttggagatggtaagtgcagggctccact-gttccttca 278 Query: 384 agatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgtttta 443 | || ||||| || ||||| |||||||| ||||| || ||||||||||||||| || | Sbjct: 277 aaatgtcaaggcaaatgctgccattgctattgatgttcgggtggaaaaccttt-gtcctg 219 Query: 444 aatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaat 503 || || ||||| |||||||||||||| ||||| || ||||| ||||||||||| | ||| Sbjct: 218 aaagctacctttggtggcttgaatggatagtcaggtggaaaatgaatagtaacaagaaac 159 Query: 504 acaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacata 563 || ||||||| ||| || || |||| |||||||||||| || |||||||| ||||||||| Sbjct: 158 actccaccagaatagggactgtcagctggacccatgattgttgcttgccaatggaacata 99 Query: 564 tcttc 568 ||||| Sbjct: 98 tcttc 94
>ref|NM_191104.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 131 bits (66), Expect = 3e-27 Identities = 255/314 (81%), Gaps = 3/314 (0%) Strand = Plus / Minus Query: 204 cccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctc 263 ||||| || ||||||||||||||||| | ||||| | ||||||||| | |||||| || Sbjct: 443 cccatggcatacttctgggtccagctgcgggctgtcgtctcatactttggacggtccgtc 384 Query: 264 ttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagtaga 323 ||||||||||| |||||||| ||||| | |||||||| ||||| ||||| || || || Sbjct: 383 ttgtacatgtgggcaatctcagggacaagagggtcgtccgggttggggtcagtgagcagc 324 Query: 324 gagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctccttca 383 ||||||| | ||||| | ||||| |||| |||||| ||||||||||| || ||||| | Sbjct: 323 gagcaga-tcgaaagcaagaccttagatattgtcaaagcagggctcca-ctgttccttaa 266 Query: 384 agatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgtttta 443 || || || || |||||||||||||| ||||| ||||| ||||| ||| ||||| ||| Sbjct: 265 gaatgtcgaggcatatgcttccattgctattgatgtttggatggaagacc-tttgtctta 207 Query: 444 aatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaat 503 || | ||||| || || ||||| |||||||||||||| || |||||| | ||||| || Sbjct: 206 aaagacacctttggaggtttgaaggggtagtccggggggaaatgaatattcaccaagaaa 147 Query: 504 acaccaccagcata 517 |||||||||||||| Sbjct: 146 acaccaccagcata 133
>gb|AY486137.1| Capsicum annuum ubiquitin-conjugating protein mRNA, complete cds Length = 578 Score = 129 bits (65), Expect = 1e-26 Identities = 254/313 (81%), Gaps = 3/313 (0%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||||||||| ||||| || || || | ||| || ||||||||||||||||| | | Sbjct: 317 tcttgtacatgtgagcaatttctggtacgagcggatcatcggggtttgggtccgtcaaca 258 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 |||||||||| || || || ||||| |||| || ||||| || ||||| | ||||||| Sbjct: 257 gagagcagatg-gacagcaggaccttcgatatggttaatgctggactccact-gctcctt 200 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttt 441 | |||||||| || || ||||||||||| ||||| || || ||||||||||| ||| Sbjct: 199 gagaatatcaaggcaaatacttccattgctattgatgttaggatggaaaacctta-gttc 141 Query: 442 taaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaa 501 |||| |||||||| || |||||||| || || ||||| || || ||||| | |||||||| Sbjct: 140 taaaagcaacctttggaggcttgaaaggataatccggagggaaatgaattgaaaccaaaa 81 Query: 502 atacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaaca 561 ||||||| |||||||| ||||| || | || |||||||| || |||||||| ||||||| Sbjct: 80 atacacctccagcataagggctatctgtcggccccatgattgttgcttgccaatggaaca 21 Query: 562 tatcttctgccac 574 |||| |||||||| Sbjct: 20 tatcctctgccac 8
>gb|BT016331.1| Zea mays clone Contig164 mRNA sequence Length = 860 Score = 127 bits (64), Expect = 4e-26 Identities = 292/364 (80%), Gaps = 3/364 (0%) Strand = Plus / Minus Query: 199 gtcagcccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggt 258 |||||||||||||||||||||| |||||||| | || || ||||| ||||||| |||| Sbjct: 548 gtcagcccatcgcgtacttctgcgtccagctgcgggccgtcgactcgtacttcggccggt 489 Query: 259 cgctcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 | ||||||||||||| |||||||||||||| | |||||||| ||||| ||||| || | Sbjct: 488 ccgtcttgtacatgtgggcaatctccgggacaagagggtcgtccgggttggggtcggtca 429 Query: 319 gtagagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctc 378 | || ||||||| | || || || ||||| || | |||||| ||||||||||| ||||| Sbjct: 428 gcagggagcaga-tggagagcaggaccttagaaattgtcaaagcagggctcca-ctgctc 371 Query: 379 cttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttg 438 || | || ||||| || || |||||||||||||||||||| || ||||| ||| |||| Sbjct: 370 tttgagaatgtcaaggcatatacttccattgctgttgatattaggatggaagacc-tttg 312 Query: 439 ttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaacca 498 | || || | |||||| || || ||||| ||||| || || || || ||||| | || | Sbjct: 311 tcttgaaagaaacctttggaggtttgaaggggtaatctggcgggaaatgaatgttcacta 252 Query: 499 aaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtgga 558 |||| |||||||||||||| || || |||| ||| ||||| || || |||||||| || | Sbjct: 251 aaaaaacaccaccagcatagggactgtcaggtggtcccataattgttgcttgccaatgaa 192 Query: 559 acat 562 |||| Sbjct: 191 acat 188
>gb|AF034946.1|AF034946 Zea mays ubiquitin conjugating enzyme (UBC) mRNA, complete cds Length = 781 Score = 127 bits (64), Expect = 4e-26 Identities = 292/364 (80%), Gaps = 3/364 (0%) Strand = Plus / Minus Query: 199 gtcagcccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggt 258 |||||||||||||||||||||| |||||||| | || || ||||| ||||||| |||| Sbjct: 488 gtcagcccatcgcgtacttctgcgtccagctgcgggccgtcgactcgtacttcggccggt 429 Query: 259 cgctcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 | ||||||||||||| |||||||||||||| | |||||||| ||||| ||||| || | Sbjct: 428 ccgtcttgtacatgtgggcaatctccgggacaagagggtcgtccgggttggggtcggtca 369 Query: 319 gtagagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctc 378 | || ||||||| | || || || ||||| || | |||||| ||||||||||| ||||| Sbjct: 368 gcagggagcaga-tggagagcaggaccttagaaattgtcaaagcagggctcca-ctgctc 311 Query: 379 cttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttg 438 || | || ||||| || || |||||||||||||||||||| || ||||| ||| |||| Sbjct: 310 tttgagaatgtcaaggcatatacttccattgctgttgatattaggatggaagacc-tttg 252 Query: 439 ttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaacca 498 | || || | |||||| || || ||||| ||||| || || || || ||||| | || | Sbjct: 251 tcttgaaagaaacctttggaggtttgaaggggtaatctggcgggaaatgaatgttcacta 192 Query: 499 aaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtgga 558 |||| |||||||||||||| || || |||| ||| ||||| || || |||||||| || | Sbjct: 191 aaaaaacaccaccagcatagggactgtcaggtggtcccataattgttgcttgccaatgaa 132 Query: 559 acat 562 |||| Sbjct: 131 acat 128
>gb|BT016295.1| Zea mays clone Contig128 mRNA sequence Length = 788 Score = 123 bits (62), Expect = 7e-25 Identities = 263/326 (80%), Gaps = 3/326 (0%) Strand = Plus / Minus Query: 237 gtggactcatacttcgcacggtcgctcttgtacatgtgcgcaatctccgggaccaacggg 296 |||||||||||||| || | |||| ||||||||||||| |||||||| ||||| | || Sbjct: 535 gtggactcatacttggccctgtcggtcttgtacatgtgagcaatctcagggacaagagga 476 Query: 297 tcgtcggggtttgggtccgttagtagagagcagatttgaaaggagcacctttgatactgt 356 || || |||||||||||||| || || ||||||||| || ||||| |||||||| | || Sbjct: 475 tcatcagggtttgggtccgtgagcagtgagcagatt-gacaggagaacctttgagatagt 417 Query: 357 caatgcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttga 416 || ||||||||||| | | ||||| | || ||||| || ||||| || |||||||||| Sbjct: 416 taaagcagggctccact-gttccttaagaatgtcaaggcaaatgctgccgttgctgttga 358 Query: 417 tatttgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtcc 476 | || ||||||||||||| | || || | ||||| ||||||||||| ||||| ||| Sbjct: 357 tgttcgggtggaaaacct-tggtgcggaaagacacctttggtggcttgaaagggtaatcc 299 Query: 477 gggggaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggaccc 536 || || |||||||| | ||||| ||||| ||||| ||| ||||||| || || || ||| Sbjct: 298 ggtgggaagtgaatgttcaccaagaataccccacctgcaaatgggctgtccgaaggcccc 239 Query: 537 atgatcgtcgcttgccagtggaacat 562 ||||| ||||||||||| |||||||| Sbjct: 238 atgatggtcgcttgccaatggaacat 213
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 119 bits (60), Expect = 1e-23 Identities = 101/112 (90%), Gaps = 2/112 (1%) Strand = Plus / Plus Query: 342 cacctttgatactgtcaatgcagggctccatttgctccttcaagatatcaagacagatgc 401 ||||||||| |||||||||||||||||||| | | ||||||| ||||||||| ||||||| Sbjct: 17797992 cacctttgacactgtcaatgcagggctccact-gttccttcaggatatcaaggcagatgc 17798050 Query: 402 ttccattgctgttgatatttgggtggaaaaccttttgttttaaatgcaacct 453 |||| || |||||||| ||||||||||||||| ||||| ||||||||||||| Sbjct: 17798051 ttccgttactgttgatgtttgggtggaaaacc-tttgtcttaaatgcaacct 17798101 Score = 107 bits (54), Expect = 4e-20 Identities = 108/126 (85%) Strand = Plus / Plus Query: 200 tcagcccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtc 259 ||||||||| || || ||||||||||||| |||||| || || ||||| || || || || Sbjct: 17797574 tcagcccattgcatatttctgggtccagcccctcgcagttgattcatatttggcccgatc 17797633 Query: 260 gctcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttag 319 ||||||||||||||||||||||||| || | ||||||||| |||||||||||||| || Sbjct: 17797634 agtcttgtacatgtgcgcaatctccggaactagcgggtcgtctgggtttgggtccgtcag 17797693 Query: 320 tagaga 325 |||||| Sbjct: 17797694 tagaga 17797699 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/126 (84%) Strand = Plus / Plus Query: 450 accttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacca 509 |||||||| || ||||| || ||||| || || |||||||||| |||||| || || ||| Sbjct: 17798507 accttgggcggtttgaacggatagtctggagggaagtgaatagaaaccaagaagacgcca 17798566 Query: 510 ccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatcttct 569 || |||||||| || || | ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 17798567 cctgcatatggactatctgctggacccataatcgtagcttgccagtggaacatatcttct 17798626 Query: 570 gccaca 575 ||||| Sbjct: 17798627 cccaca 17798632 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 agcgaagatggctccaacatc 176 ||||||||||||||||||||| Sbjct: 27343812 agcgaagatggctccaacatc 27343792
>dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0561B08 Length = 161083 Score = 119 bits (60), Expect = 1e-23 Identities = 101/112 (90%), Gaps = 2/112 (1%) Strand = Plus / Plus Query: 342 cacctttgatactgtcaatgcagggctccatttgctccttcaagatatcaagacagatgc 401 ||||||||| |||||||||||||||||||| | | ||||||| ||||||||| ||||||| Sbjct: 3181 cacctttgacactgtcaatgcagggctccact-gttccttcaggatatcaaggcagatgc 3239 Query: 402 ttccattgctgttgatatttgggtggaaaaccttttgttttaaatgcaacct 453 |||| || |||||||| ||||||||||||||| ||||| ||||||||||||| Sbjct: 3240 ttccgttactgttgatgtttgggtggaaaacc-tttgtcttaaatgcaacct 3290 Score = 107 bits (54), Expect = 4e-20 Identities = 108/126 (85%) Strand = Plus / Plus Query: 200 tcagcccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtc 259 ||||||||| || || ||||||||||||| |||||| || || ||||| || || || || Sbjct: 2763 tcagcccattgcatatttctgggtccagcccctcgcagttgattcatatttggcccgatc 2822 Query: 260 gctcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttag 319 ||||||||||||||||||||||||| || | ||||||||| |||||||||||||| || Sbjct: 2823 agtcttgtacatgtgcgcaatctccggaactagcgggtcgtctgggtttgggtccgtcag 2882 Query: 320 tagaga 325 |||||| Sbjct: 2883 tagaga 2888 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/126 (84%) Strand = Plus / Plus Query: 450 accttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacca 509 |||||||| || ||||| || ||||| || || |||||||||| |||||| || || ||| Sbjct: 3696 accttgggcggtttgaacggatagtctggagggaagtgaatagaaaccaagaagacgcca 3755 Query: 510 ccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatcttct 569 || |||||||| || || | ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 3756 cctgcatatggactatctgctggacccataatcgtagcttgccagtggaacatatcttct 3815 Query: 570 gccaca 575 ||||| Sbjct: 3816 cccaca 3821
>dbj|AP004743.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0026G06 Length = 123129 Score = 119 bits (60), Expect = 1e-23 Identities = 101/112 (90%), Gaps = 2/112 (1%) Strand = Plus / Plus Query: 342 cacctttgatactgtcaatgcagggctccatttgctccttcaagatatcaagacagatgc 401 ||||||||| |||||||||||||||||||| | | ||||||| ||||||||| ||||||| Sbjct: 68414 cacctttgacactgtcaatgcagggctccact-gttccttcaggatatcaaggcagatgc 68472 Query: 402 ttccattgctgttgatatttgggtggaaaaccttttgttttaaatgcaacct 453 |||| || |||||||| ||||||||||||||| ||||| ||||||||||||| Sbjct: 68473 ttccgttactgttgatgtttgggtggaaaacc-tttgtcttaaatgcaacct 68523 Score = 107 bits (54), Expect = 4e-20 Identities = 108/126 (85%) Strand = Plus / Plus Query: 200 tcagcccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtc 259 ||||||||| || || ||||||||||||| |||||| || || ||||| || || || || Sbjct: 67996 tcagcccattgcatatttctgggtccagcccctcgcagttgattcatatttggcccgatc 68055 Query: 260 gctcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttag 319 ||||||||||||||||||||||||| || | ||||||||| |||||||||||||| || Sbjct: 68056 agtcttgtacatgtgcgcaatctccggaactagcgggtcgtctgggtttgggtccgtcag 68115 Query: 320 tagaga 325 |||||| Sbjct: 68116 tagaga 68121 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/126 (84%) Strand = Plus / Plus Query: 450 accttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacca 509 |||||||| || ||||| || ||||| || || |||||||||| |||||| || || ||| Sbjct: 68929 accttgggcggtttgaacggatagtctggagggaagtgaatagaaaccaagaagacgcca 68988 Query: 510 ccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatcttct 569 || |||||||| || || | ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 68989 cctgcatatggactatctgctggacccataatcgtagcttgccagtggaacatatcttct 69048 Query: 570 gccaca 575 ||||| Sbjct: 69049 cccaca 69054
>dbj|AK066232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057M05, full insert sequence Length = 2141 Score = 119 bits (60), Expect = 1e-23 Identities = 101/112 (90%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 342 cacctttgatactgtcaatgcagggctccatttgctccttcaagatatcaagacagatgc 401 ||||||||| |||||||||||||||||||| | | ||||||| ||||||||| ||||||| Sbjct: 1561 cacctttgacactgtcaatgcagggctccact-gttccttcaggatatcaaggcagatgc 1503 Query: 402 ttccattgctgttgatatttgggtggaaaaccttttgttttaaatgcaacct 453 |||| || |||||||| ||||||||||||||| ||||| ||||||||||||| Sbjct: 1502 ttccgttactgttgatgtttgggtggaaaacc-tttgtcttaaatgcaacct 1452 Score = 107 bits (54), Expect = 4e-20 Identities = 108/126 (85%) Strand = Plus / Minus Query: 200 tcagcccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtc 259 ||||||||| || || ||||||||||||| |||||| || || ||||| || || || || Sbjct: 1979 tcagcccattgcatatttctgggtccagcccctcgcagttgattcatatttggcccgatc 1920 Query: 260 gctcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttag 319 ||||||||||||||||||||||||| || | ||||||||| |||||||||||||| || Sbjct: 1919 agtcttgtacatgtgcgcaatctccggaactagcgggtcgtctgggtttgggtccgtcag 1860 Query: 320 tagaga 325 |||||| Sbjct: 1859 tagaga 1854 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/126 (84%) Strand = Plus / Minus Query: 450 accttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacca 509 |||||||| || ||||| || ||||| || || |||||||||| |||||| || || ||| Sbjct: 1046 accttgggcggtttgaacggatagtctggagggaagtgaatagaaaccaagaagacgcca 987 Query: 510 ccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatcttct 569 || |||||||| || || | ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 986 cctgcatatggactatctgctggacccataatcgtagcttgccagtggaacatatcttct 927 Query: 570 gccaca 575 ||||| Sbjct: 926 cccaca 921
>gb|U15971.1|OSU15971 Oryza sativa ubiquitin conjugating enzyme (UBC) gene, complete cds Length = 2088 Score = 119 bits (60), Expect = 1e-23 Identities = 101/112 (90%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 342 cacctttgatactgtcaatgcagggctccatttgctccttcaagatatcaagacagatgc 401 ||||||||| |||||||||||||||||||| | | ||||||| ||||||||| ||||||| Sbjct: 1581 cacctttgacactgtcaatgcagggctccact-gttccttcaggatatcaaggcagatgc 1523 Query: 402 ttccattgctgttgatatttgggtggaaaaccttttgttttaaatgcaacct 453 |||| || |||||||| ||||||||||||||| ||||| ||||||||||||| Sbjct: 1522 ttccgttactgttgatgtttgggtggaaaacc-tttgtcttaaatgcaacct 1472 Score = 91.7 bits (46), Expect = 2e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 200 tcagcccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtc 259 ||||||||| || || ||||||||||||| |||||| || || ||||| || || || || Sbjct: 1974 tcagcccattgcatatttctgggtccagcccctcgcagttgattcatatttggcccgatc 1915 Query: 260 gctcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttag 319 |||||||||||||||| |||||||| || | ||||||||| ||||||||| |||| || Sbjct: 1914 agtcttgtacatgtgcgccatctccggaactagcgggtcgtctgggtttgggaccgtcag 1855 Query: 320 tagaga 325 |||||| Sbjct: 1854 tagaga 1849 Score = 69.9 bits (35), Expect = 9e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 483 aagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatgatc 542 |||||||||| |||||| || || || || |||||||| || || | |||||||| ||| Sbjct: 1245 aagtgaatagaaaccaagaagacgccgcctgcatatggactatctggcggacccataatc 1186 Query: 543 gtcgcttgccagtggaacatatcttct 569 || |||||||||||||||||||||||| Sbjct: 1185 gtagcttgccagtggaacatatcttct 1159
>gb|DQ207855.1| Solanum tuberosum clone 078A09 ubiquitin-conjugating enzyme 8-like mRNA, complete cds Length = 757 Score = 117 bits (59), Expect = 4e-23 Identities = 248/307 (80%), Gaps = 3/307 (0%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 |||||||||| || |||||||| || ||||| || || || || || ||||||||||| | Sbjct: 448 tcttgtacatatgagcaatctcgggcaccaaaggatcatcaggattagggtccgttagca 389 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 ||||||||||| || || |||||||| || | || | ||| |||||||||| | ||||| Sbjct: 388 gagagcagatt-gacagcagcaccttggaaatcgtaagtgccgggctccatt-gttcctt 331 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttt 441 || || || || || ||||| |||||||||||||| |||||||| ||||||||| || Sbjct: 330 cagaatgtcgaggcaaatgctgccattgctgttgatgtttgggtgaaaaaccttt-gtcc 272 Query: 442 taaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaa 501 |||| || ||||| || ||||| ||||| || || || ||||| ||||| || || | || Sbjct: 271 taaaagctacctttggaggcttaaatggataatcgggtggaaaatgaatggtcacaagaa 212 Query: 502 atacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaaca 561 | || ||||||||||| || || ||||||||||| || | |||||||||||||| |||| Sbjct: 211 acactccaccagcataaggactgtcagatggaccaataagtgtcgcttgccagtgaaaca 152 Query: 562 tatcttc 568 ||||||| Sbjct: 151 tatcttc 145 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 204 cccatcgcgtacttctgggtccagctcc 231 ||||| |||||||| ||||||||||||| Sbjct: 506 cccattgcgtacttttgggtccagctcc 479
>gb|AY109692.1| Zea mays CL301_1 mRNA sequence Length = 912 Score = 115 bits (58), Expect = 2e-22 Identities = 262/326 (80%), Gaps = 3/326 (0%) Strand = Plus / Minus Query: 237 gtggactcatacttcgcacggtcgctcttgtacatgtgcgcaatctccgggaccaacggg 296 |||||||||||||| || | |||| ||||||||||||| |||||||| ||||| | || Sbjct: 534 gtggactcatacttggccctgtcggtcttgtacatgtgagcaatctcagggacaagagga 475 Query: 297 tcgtcggggtttgggtccgttagtagagagcagatttgaaaggagcacctttgatactgt 356 || || |||||||||||||| || || ||||||||| || ||||| |||||||| | || Sbjct: 474 tcatcagggtttgggtccgtgagcagtgagcagatt-gacaggagaacctttgagatagt 416 Query: 357 caatgcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttga 416 || ||||| ||||| | | ||||| | || ||||| || ||||| || |||||||||| Sbjct: 415 taaagcaggactccact-gttccttaagaatgtcaaggcaaatgctgccgttgctgttga 357 Query: 417 tatttgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtcc 476 | || ||||||||||||| | || || | ||||| ||||||||||| ||||| ||| Sbjct: 356 tgttcgggtggaaaacct-tggtgcggaaagacacctttggtggcttgaaagggtaatcc 298 Query: 477 gggggaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggaccc 536 || || |||||||| | ||||| ||||| ||||| ||| ||||||| || || || ||| Sbjct: 297 ggtgggaagtgaatgttcaccaagaataccccacctgcaaatgggctgtccgaaggcccc 238 Query: 537 atgatcgtcgcttgccagtggaacat 562 ||||| ||||||||||| |||||||| Sbjct: 237 atgatggtcgcttgccaatggaacat 212
>gb|AY082005.1| Gossypium hirsutum ubiquitin-conjugating enzyme E2 (UBC2) mRNA, complete cds Length = 850 Score = 111 bits (56), Expect = 3e-21 Identities = 153/184 (83%), Gaps = 1/184 (0%) Strand = Plus / Minus Query: 385 gatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaa 444 |||||||||||| ||||| |||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 432 gatatcaagacaaatgctcccattgctattgatgtttggatggaaaaccttg-gtcctaa 374 Query: 445 atgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaata 504 |||||||||| || |||||||| || || || || ||||| |||||| |||| ||||||| Sbjct: 373 atgcaaccttagggggcttgaaaggataatctggaggaaaatgaatactaactaaaaata 314 Query: 505 caccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatat 564 |||| || ||||| ||||| || || || |||||||| || |||||||| || ||||| | Sbjct: 313 cacctcccgcataagggctatcggaagggcccatgattgttgcttgccaatgaaacatgt 254 Query: 565 cttc 568 |||| Sbjct: 253 cttc 250 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Minus Query: 204 cccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctc 263 ||||| || |||||||||||||||| | ||||| | |||||||| || || || || Sbjct: 611 cccatggcatacttctgggtccagccacgtgctgtagcttcatactttgcccgatcagtc 552 Query: 264 ttgtacatgtgcgcaatctcc 284 || |||||||||||||||||| Sbjct: 551 ttatacatgtgcgcaatctcc 531
>emb|AJ718680.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC4-23-270, cultivar Bright Yellow 2 Length = 225 Score = 111 bits (56), Expect = 3e-21 Identities = 154/188 (81%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||| | ||| || ||||||||||| ||||| || |||||||||||||| ||| |||| Sbjct: 200 atatccanacaaatncttccattgctattgatnttagggtggaaaacctta-gttctaaa 142 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 |||||||| || |||||||| || || ||||| || || ||||| | |||||||||||| Sbjct: 141 ggcaacctttggaggcttgaaaggataatccggagggaaatgaattgnaaccaaaaatac 82 Query: 506 accaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatc 565 ||| ||||| || ||||| || | || |||||||| || || ||||| ||||||||||| Sbjct: 81 accnccagcntaagggctntctgtaggccccatgattgtagcntgccaatggaacatatc 22 Query: 566 ttctgcca 573 ||||||| Sbjct: 21 ctctgcca 14
>gb|AY104017.1| Zea mays PCO119482 mRNA sequence Length = 885 Score = 107 bits (54), Expect = 4e-20 Identities = 194/238 (81%), Gaps = 2/238 (0%) Strand = Plus / Minus Query: 199 gtcagcccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggt 258 |||||||||||||||||||||| |||||||| | || || ||||| ||||||| |||| Sbjct: 585 gtcagcccatcgcgtacttctgcgtccagctgcgggccgtcgactcgtacttcggccggt 526 Query: 259 cgctcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 | ||||||||||||| |||||||||||||| | |||||||| ||||| ||||| || | Sbjct: 525 ccgtcttgtacatgtgggcaatctccgggacaagagggtcgtccgggttggggtcggtca 466 Query: 319 gtagagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctc 378 | || ||||||| | || || || ||||| || | ||||| ||||||||||| ||||| Sbjct: 465 gcagggagcaga-tggagagcaggaccttagaaattgtcagagcagggctcca-ctgctc 408 Query: 379 cttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttt 436 || | || ||||| || || |||||||||||||||||||| || ||||| |||||| Sbjct: 407 tttgagaatgtcaaggcatatacttccattgctgttgatattaggatggaagaccttt 350
>gb|AY082004.1| Gossypium hirsutum ubiquitin-conjugating enzyme E2 (UBC1) mRNA, complete cds Length = 773 Score = 105 bits (53), Expect = 2e-19 Identities = 161/196 (82%), Gaps = 1/196 (0%) Strand = Plus / Minus Query: 385 gatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaa 444 |||||||||||| ||||| |||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 453 gatatcaagacaaatgctcccattgctattgatgtttggatggaaaaccttg-gtcctaa 395 Query: 445 atgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaata 504 |||||||||| || |||||||| || || || || ||||| |||||| |||| ||||||| Sbjct: 394 atgcaaccttagggggcttgaaaggataatctggaggaaaatgaatactaactaaaaata 335 Query: 505 caccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatat 564 |||| || ||||| ||||| || || || ||||||| || |||||||| || ||||| | Sbjct: 334 cacctcccgcataagggctatcggaagggcccatgagtgttgcttgccaatgaaacatgt 275 Query: 565 cttctgccacangacc 580 |||| || ||| |||| Sbjct: 274 cttcagctacaggacc 259
>gb|AF154650.1| Nicotiana tabacum clone PR35 mRNA sequence Length = 671 Score = 105 bits (53), Expect = 2e-19 Identities = 249/309 (80%), Gaps = 4/309 (1%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 |||||||||| || |||||||| || ||||| || || || || || ||||||||||| | Sbjct: 412 tcttgtacatatgagcaatctcaggcaccaaaggatcatcaggattagggtccgttagca 353 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 |||| ||||| || | ||||||||| |||| ||| | ||| |||||||| | | ||||| Sbjct: 352 gagaacagata-gacatgagcaccttggatattgtgagtgcggggctccact-gttcctt 295 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttt 441 ||| || || || || ||||| |||||||||||||| |||||||| |||||| ||||| Sbjct: 294 caaaatgtcgaggcaaatgctaccattgctgttgatgtttgggtgaaaaacc-tttgtcc 236 Query: 442 taaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaa 501 |||| || ||||| || ||||| ||||| || || || ||||| ||||| ||||| | || Sbjct: 235 taaaagctacctttggaggcttaaatggataatcaggcggaaaatgaatggtaacaagaa 176 Query: 502 atacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaac- 560 | || || |||||||| || || |||||||||||||| | ||| |||||||| || ||| Sbjct: 175 acactccgccagcataaggactgtcagatggacccataagcgttgcttgccaatgaaact 116 Query: 561 atatcttct 569 ||||||||| Sbjct: 115 atatcttct 107
>ref|NM_124997.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G56150 transcript variant AT5G56150.2 mRNA, complete cds Length = 744 Score = 103 bits (52), Expect = 6e-19 Identities = 265/332 (79%), Gaps = 3/332 (0%) Strand = Plus / Minus Query: 234 gctgtggactcatacttcgcacggtcgctcttgtacatgtgcgcaatctccgggaccaac 293 ||||||||||| ||||| | ||||| ||||||| |||||||| || || || ||||| Sbjct: 491 gctgtggactcgtacttgactcggtctgtcttgtagatgtgcgctatttcaggaaccaaa 432 Query: 294 gggtcgtcggggtttgggtccgttagtagagagcagatttgaaaggagcacctttgatac 353 || ||||| |||||||| ||||| || | ||||| || || || || ||||| ||||| Sbjct: 431 ggatcgtcagggtttggatccgtcagcaatgagcatatc-gacagaagaaccttggatac 373 Query: 354 tgtcaatgcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgt 413 || | |||||||||||| | |||| |||| || ||||||||||| |||||||| |||| Sbjct: 372 ggtaagtgcagggctccact-gctctttcagaatgtcaagacagatacttccattactgt 314 Query: 414 tgatatttgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtag 473 |||| |||||||| ||||||| || || |||||||| ||||||||||| ||||| Sbjct: 313 tgatgtttgggtgataaaccttg-gtccggaaggcaacctttggtggcttgaaagggtaa 255 Query: 474 tccgggggaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatgga 533 || || || |||||||| ||||| | ||| ||||| || ||| | ||||| || | |||| Sbjct: 254 tctggtgggaagtgaatggtaacaagaaacacacctccggcaaacgggctatctgctgga 195 Query: 534 cccatgatcgtcgcttgccagtggaacatatc 565 |||||||| || |||||||| ||||||||||| Sbjct: 194 cccatgatagttgcttgccattggaacatatc 163
>ref|NM_180867.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G56150 transcript variant AT5G56150.1 mRNA, complete cds Length = 751 Score = 103 bits (52), Expect = 6e-19 Identities = 265/332 (79%), Gaps = 3/332 (0%) Strand = Plus / Minus Query: 234 gctgtggactcatacttcgcacggtcgctcttgtacatgtgcgcaatctccgggaccaac 293 ||||||||||| ||||| | ||||| ||||||| |||||||| || || || ||||| Sbjct: 498 gctgtggactcgtacttgactcggtctgtcttgtagatgtgcgctatttcaggaaccaaa 439 Query: 294 gggtcgtcggggtttgggtccgttagtagagagcagatttgaaaggagcacctttgatac 353 || ||||| |||||||| ||||| || | ||||| || || || || ||||| ||||| Sbjct: 438 ggatcgtcagggtttggatccgtcagcaatgagcatatc-gacagaagaaccttggatac 380 Query: 354 tgtcaatgcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgt 413 || | |||||||||||| | |||| |||| || ||||||||||| |||||||| |||| Sbjct: 379 ggtaagtgcagggctccact-gctctttcagaatgtcaagacagatacttccattactgt 321 Query: 414 tgatatttgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtag 473 |||| |||||||| ||||||| || || |||||||| ||||||||||| ||||| Sbjct: 320 tgatgtttgggtgataaaccttg-gtccggaaggcaacctttggtggcttgaaagggtaa 262 Query: 474 tccgggggaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatgga 533 || || || |||||||| ||||| | ||| ||||| || ||| | ||||| || | |||| Sbjct: 261 tctggtgggaagtgaatggtaacaagaaacacacctccggcaaacgggctatctgctgga 202 Query: 534 cccatgatcgtcgcttgccagtggaacatatc 565 |||||||| || |||||||| ||||||||||| Sbjct: 201 cccatgatagttgcttgccattggaacatatc 170
>gb|AY220735.1| Hordeum vulgare ubiquitin-conjugating enzyme (UBC) mRNA, complete cds Length = 758 Score = 103 bits (52), Expect = 6e-19 Identities = 244/304 (80%), Gaps = 3/304 (0%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||||||||| |||||||| ||||| | |||||||| ||||| ||||| || || | Sbjct: 487 tcttgtacatgtgggcaatctcagggacgagagggtcgtccgggttagggtcggtaagca 428 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 | ||||||| ||||||| || ||||| || | ||||| ||||| ||||| ||||||||| Sbjct: 427 gcgagcaga-ttgaaagcagaaccttagagatcgtcaaagcaggactcca-ttgctcctt 370 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttt 441 || || || || || |||||||||||||| ||||| || || ||||| ||| ||||| | Sbjct: 369 cagaatgtcgaggcatatgcttccattgctattgatgttcggatggaagacc-tttgtct 311 Query: 442 taaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaa 501 | || | ||||| || |||||||| |||||||||||||| || || ||| | ||||| | Sbjct: 310 tgaacgataccttcggaggcttgaacgggtagtccggggggaaatggatattcaccaaga 251 Query: 502 atacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaaca 561 | ||||| |||||||| || || ||| || |||||||| || || ||||| ||||||| Sbjct: 250 aaacacctccagcatagggactatcatgagggcccatgatggttgcctgccaatggaaca 191 Query: 562 tatc 565 |||| Sbjct: 190 tatc 187
>gb|AY081511.1| Arabidopsis thaliana ubiquitin-conjugating enzyme-like protein (MDA7.21) mRNA, complete cds Length = 479 Score = 103 bits (52), Expect = 6e-19 Identities = 265/332 (79%), Gaps = 3/332 (0%) Strand = Plus / Minus Query: 234 gctgtggactcatacttcgcacggtcgctcttgtacatgtgcgcaatctccgggaccaac 293 ||||||||||| ||||| | ||||| ||||||| |||||||| || || || ||||| Sbjct: 413 gctgtggactcgtacttgactcggtctgtcttgtagatgtgcgctatttcaggaaccaaa 354 Query: 294 gggtcgtcggggtttgggtccgttagtagagagcagatttgaaaggagcacctttgatac 353 || ||||| |||||||| ||||| || | ||||| || || || || ||||| ||||| Sbjct: 353 ggatcgtcagggtttggatccgtcagcaatgagcatatc-gacagaagaaccttggatac 295 Query: 354 tgtcaatgcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgt 413 || | |||||||||||| | |||| |||| || ||||||||||| |||||||| |||| Sbjct: 294 ggtaagtgcagggctccact-gctctttcagaatgtcaagacagatacttccattactgt 236 Query: 414 tgatatttgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtag 473 |||| |||||||| ||||||| || || |||||||| ||||||||||| ||||| Sbjct: 235 tgatgtttgggtgataaaccttg-gtccggaaggcaacctttggtggcttgaaagggtaa 177 Query: 474 tccgggggaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatgga 533 || || || |||||||| ||||| | ||| ||||| || ||| | ||||| || | |||| Sbjct: 176 tctggtgggaagtgaatggtaacaagaaacacacctccggcaaacgggctatctgctgga 117 Query: 534 cccatgatcgtcgcttgccagtggaacatatc 565 |||||||| || |||||||| ||||||||||| Sbjct: 116 cccatgatagttgcttgccattggaacatatc 85
>gb|AY059806.1| Arabidopsis thaliana ubiquitin-conjugating enzyme-like protein (MDA7.21) mRNA, complete cds Length = 717 Score = 103 bits (52), Expect = 6e-19 Identities = 265/332 (79%), Gaps = 3/332 (0%) Strand = Plus / Minus Query: 234 gctgtggactcatacttcgcacggtcgctcttgtacatgtgcgcaatctccgggaccaac 293 ||||||||||| ||||| | ||||| ||||||| |||||||| || || || ||||| Sbjct: 492 gctgtggactcgtacttgactcggtctgtcttgtagatgtgcgctatttcaggaaccaaa 433 Query: 294 gggtcgtcggggtttgggtccgttagtagagagcagatttgaaaggagcacctttgatac 353 || ||||| |||||||| ||||| || | ||||| || || || || ||||| ||||| Sbjct: 432 ggatcgtcagggtttggatccgtcagcaatgagcatatc-gacagaagaaccttggatac 374 Query: 354 tgtcaatgcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgt 413 || | |||||||||||| | |||| |||| || ||||||||||| |||||||| |||| Sbjct: 373 ggtaagtgcagggctccact-gctctttcagaatgtcaagacagatacttccattactgt 315 Query: 414 tgatatttgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtag 473 |||| |||||||| ||||||| || || |||||||| ||||||||||| ||||| Sbjct: 314 tgatgtttgggtgataaaccttg-gtccggaaggcaacctttggtggcttgaaagggtaa 256 Query: 474 tccgggggaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatgga 533 || || || |||||||| ||||| | ||| ||||| || ||| | ||||| || | |||| Sbjct: 255 tctggtgggaagtgaatggtaacaagaaacacacctccggcaaacgggctatctgctgga 196 Query: 534 cccatgatcgtcgcttgccagtggaacatatc 565 |||||||| || |||||||| ||||||||||| Sbjct: 195 cccatgatagttgcttgccattggaacatatc 164
>gb|AY084220.1| Arabidopsis thaliana clone 10022 mRNA, complete sequence Length = 750 Score = 103 bits (52), Expect = 6e-19 Identities = 265/332 (79%), Gaps = 3/332 (0%) Strand = Plus / Minus Query: 234 gctgtggactcatacttcgcacggtcgctcttgtacatgtgcgcaatctccgggaccaac 293 ||||||||||| ||||| | ||||| ||||||| |||||||| || || || ||||| Sbjct: 498 gctgtggactcgtacttgactcggtctgtcttgtagatgtgcgctatttcaggaaccaaa 439 Query: 294 gggtcgtcggggtttgggtccgttagtagagagcagatttgaaaggagcacctttgatac 353 || ||||| |||||||| ||||| || | ||||| || || || || ||||| ||||| Sbjct: 438 ggatcgtcagggtttggatccgtcagcaatgagcatatc-gacagaagaaccttggatac 380 Query: 354 tgtcaatgcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgt 413 || | |||||||||||| | |||| |||| || ||||||||||| |||||||| |||| Sbjct: 379 ggtaagtgcagggctccact-gctctttcagaatgtcaagacagatacttccattactgt 321 Query: 414 tgatatttgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtag 473 |||| |||||||| ||||||| || || |||||||| ||||||||||| ||||| Sbjct: 320 tgatgtttgggtgataaaccttg-gtccggaaggcaacctttggtggcttgaaagggtaa 262 Query: 474 tccgggggaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatgga 533 || || || |||||||| ||||| | ||| ||||| || ||| | ||||| || | |||| Sbjct: 261 tctggtgggaagtgaatggtaacaagaaacacacctccggcaaacgggctatctgctgga 202 Query: 534 cccatgatcgtcgcttgccagtggaacatatc 565 |||||||| || |||||||| ||||||||||| Sbjct: 201 cccatgatagttgcttgccattggaacatatc 170
>gb|AY104144.1| Zea mays PCO100898 mRNA sequence Length = 831 Score = 103 bits (52), Expect = 6e-19 Identities = 244/304 (80%), Gaps = 3/304 (0%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||||||||| |||||||| ||||| | || ||||| ||||| || || || || | Sbjct: 518 tcttgtacatgtgagcaatctcagggacaagaggatcgtctgggttgggatcagtaagca 459 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 | |||||||| ||||| | ||||| || | |||||| ||||||||||| | ||||||| Sbjct: 458 gcgagcagata-gaaagcaaaaccttagagattgtcaaagcagggctccact-gctcctt 401 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttt 441 | || |||||||| ||||||||||| || ||||| ||||| ||||| ||||| || | Sbjct: 400 aagaatgtcaagacatatgcttccattactattgatgtttggatggaagaccttc-gtct 342 Query: 442 taaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaa 501 |||| | ||||| || |||||||| |||||||| || || || ||||| | ||||| | Sbjct: 341 taaaagatacctttggaggcttgaaggggtagtctggcgggaaatgaatgttcaccaaga 282 Query: 502 atacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaaca 561 | ||||| ||||||||||| || |||| ||||||||||| || || ||||||||||||| Sbjct: 281 aaacacctccagcatatggactatcaggaggacccatgatggttgcctgccagtggaaca 222 Query: 562 tatc 565 |||| Sbjct: 221 tatc 218
>gb|DQ027043.1| Arabidopsis thaliana ubiquitinating enzyme (At5g56150) mRNA, complete cds Length = 447 Score = 103 bits (52), Expect = 6e-19 Identities = 265/332 (79%), Gaps = 3/332 (0%) Strand = Plus / Minus Query: 234 gctgtggactcatacttcgcacggtcgctcttgtacatgtgcgcaatctccgggaccaac 293 ||||||||||| ||||| | ||||| ||||||| |||||||| || || || ||||| Sbjct: 413 gctgtggactcgtacttgactcggtctgtcttgtagatgtgcgctatttcaggaaccaaa 354 Query: 294 gggtcgtcggggtttgggtccgttagtagagagcagatttgaaaggagcacctttgatac 353 || ||||| |||||||| ||||| || | ||||| || || || || ||||| ||||| Sbjct: 353 ggatcgtcagggtttggatccgtcagcaatgagcatatc-gacagaagaaccttggatac 295 Query: 354 tgtcaatgcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgt 413 || | |||||||||||| | |||| |||| || ||||||||||| |||||||| |||| Sbjct: 294 ggtaagtgcagggctccact-gctctttcagaatgtcaagacagatacttccattactgt 236 Query: 414 tgatatttgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtag 473 |||| |||||||| ||||||| || || |||||||| ||||||||||| ||||| Sbjct: 235 tgatgtttgggtgataaaccttg-gtccggaaggcaacctttggtggcttgaaagggtaa 177 Query: 474 tccgggggaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatgga 533 || || || |||||||| ||||| | ||| ||||| || ||| | ||||| || | |||| Sbjct: 176 tctggtgggaagtgaatggtaacaagaaacacacctccggcaaacgggctatctgctgga 117 Query: 534 cccatgatcgtcgcttgccagtggaacatatc 565 |||||||| || |||||||| ||||||||||| Sbjct: 116 cccatgatagttgcttgccattggaacatatc 85
>gb|AF532622.1| Glycine max ubiquitin-conjugation enzyme gene, complete cds Length = 929 Score = 101 bits (51), Expect = 3e-18 Identities = 167/203 (82%), Gaps = 2/203 (0%) Strand = Plus / Minus Query: 360 tgcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatat 419 |||||||||||| | ||||||||| |||||||||||| ||||| |||||||| ||||| | Sbjct: 471 tgcagggctccact-gctccttcaggatatcaagacaaatgctaccattgctattgatgt 413 Query: 420 ttgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccggg 479 | ||||| || ||||| || |||| |||||||| || |||||||| || || ||||| Sbjct: 412 tcgggtgaaacacctta-gtcctaaaggcaaccttaggaggcttgaaaggataatccgga 354 Query: 480 ggaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatg 539 || ||||||||||| || | |||||||| |||||||| || || |||| |||||||| Sbjct: 353 gggaagtgaatagtgactaggaatacacctccagcataaggactatcagcaggacccatt 294 Query: 540 atcgtcgcttgccagtggaacat 562 || || |||||||| |||||||| Sbjct: 293 attgttgcttgccaatggaacat 271 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 200 tcagcccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtc 259 ||||||||| || ||||||||||||||||| | || |||| ||||||||| || ||||| Sbjct: 630 tcagcccatggcatacttctgggtccagctgcgtgcagtggcctcatacttggcccggtc 571 Query: 260 gctcttgtacatgtg 274 | ||||||||||| Sbjct: 570 agttttgtacatgtg 556
>gb|BT013204.1| Lycopersicon esculentum clone 134378F, mRNA sequence Length = 774 Score = 101 bits (51), Expect = 3e-18 Identities = 285/359 (79%), Gaps = 3/359 (0%) Strand = Plus / Minus Query: 204 cccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctc 263 ||||| || |||||||||||||| |||| ||||| || || || || || | ||| || Sbjct: 487 cccatagcatacttctgggtccaactccgggctgttgattcgtattttgccctgtctgtc 428 Query: 264 ttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagtaga 323 |||||||| || |||||||| || ||||| || || ||||||||||| ||||| | || Sbjct: 427 ttgtacatatgagcaatctcaggcaccaaaggatcatcggggtttggatccgtcaagagt 368 Query: 324 gagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctccttca 383 ||||||||| ||||| | ||||| || | ||||| ||||||||||||| ||||||||| Sbjct: 367 gagcagatt-gaaagcaaaaccttggaaatagtcaaggcagggctccatt-gctccttca 310 Query: 384 agatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgtttta 443 | || || | || || || |||||||| || |||||||| |||||||| |||||| || Sbjct: 309 atatgtccaagcatatactgccattgctattaatatttggatggaaaac-ttttgtccta 251 Query: 444 aatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaat 503 || |||||||| || || || ||||| || || || ||||| |||||||| || |||||| Sbjct: 250 aaagcaaccttaggaggtttaaatggataatcaggaggaaaatgaatagtgactaaaaat 191 Query: 504 acaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacat 562 ||||| |||||||| || || || | || ||||| || || ||||||||||| ||||| Sbjct: 190 acacccccagcatagggactatctggagggcccattattgtagcttgccagtgaaacat 132
>gb|AY086109.1| Arabidopsis thaliana clone 21455 mRNA, complete sequence Length = 709 Score = 101 bits (51), Expect = 3e-18 Identities = 184/226 (81%), Gaps = 2/226 (0%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| |||| ||||| |||||||| || || ||||||||||| ||||| || Sbjct: 390 gcagggctccatt-gctctttcaaaatatcaaggcaaatacttccattgctattgatgtt 332 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||| ||| | ||||| || ||||| | ||||| ||||||||||| || || ||||| | Sbjct: 331 tggatggtacacctta-gtcttaaaagacacctttggtggcttgaaaggataatccggag 273 Query: 481 gaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatga 540 |||| ||||||| ||||||||| || || || ||||| || ||||||| || ||||||| Sbjct: 272 gaaaatgaatagaaaccaaaaacactcctccggcatacggactttcaggaggtcccatga 213 Query: 541 tcgtcgcttgccagtggaacatatcttctgccacangaccggcgct 586 | || |||||||| |||||||| || || ||||| |||| ||||| Sbjct: 212 tagttgcttgccaatggaacatgtcctcagccaccggaccagcgct 167
>gb|DQ222513.1| Solanum tuberosum clone 117E03 ubiquitin conjugating enzyme E2-like mRNA, complete cds Length = 835 Score = 97.6 bits (49), Expect = 4e-17 Identities = 244/305 (80%), Gaps = 3/305 (0%) Strand = Plus / Minus Query: 264 ttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagtaga 323 |||||||| || ||||||||||| ||||| ||||| || || || ||||| || || ||| Sbjct: 428 ttgtacatatgagcaatctccggcaccaaagggtcatcaggattagggtctgtcagcaga 369 Query: 324 gagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctccttca 383 || |||| | || || || ||||| || | || | |||||||||||| || ||||||| Sbjct: 368 gaacaga-tagagagcagtaccttggagatggtaagtgcagggctcca-ctgttccttca 311 Query: 384 agatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgtttta 443 | || || || || ||||| |||||||| ||||| || |||||||||||| ||||| | Sbjct: 310 aaatgtctaggcatatgctgccattgctattgatgttcgggtggaaaacc-tttgtcctg 252 Query: 444 aatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaat 503 || || ||||| |||||||||||||| ||||| || ||||| ||||| ||||| | ||| Sbjct: 251 aaagctacctttggtggcttgaatggatagtcaggtggaaaatgaatggtaacaagaaac 192 Query: 504 acaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacata 563 || ||||||| ||| || || |||| ||| |||||||| || |||||||| || |||||| Sbjct: 191 actccaccagaatagggactgtcagctgggcccatgattgttgcttgccaatgaaacata 132 Query: 564 tcttc 568 ||||| Sbjct: 131 tcttc 127
>ref|NM_192451.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1125 Score = 97.6 bits (49), Expect = 4e-17 Identities = 168/205 (81%), Gaps = 2/205 (0%) Strand = Plus / Minus Query: 364 gggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatttgg 423 |||||||||| | ||||| | ||| ||||| || ||||| || ||||||||||| ||||| Sbjct: 737 gggctccattgg-tccttaaggatgtcaaggcaaatgctcccgttgctgttgatgtttgg 679 Query: 424 gtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaa 483 ||||||||||| || ||| || ||||||||||| ||||| || || || || || | Sbjct: 678 atggaaaaccttg-gtgcgaaacgccaccttgggtggtttgaagggataatcaggaggga 620 Query: 484 agtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcg 543 |||| || ||||| | || || ||||||||||||||||| |||||||||||||| |||| Sbjct: 619 agtggatggtaactaggaaaactccaccagcatatgggctatcagatggacccattatcg 560 Query: 544 tcgcttgccagtggaacatatcttc 568 | || |||||||||||||| ||||| Sbjct: 559 ttgcctgccagtggaacatgtcttc 535
>gb|AY769917.1| Arachis hypogaea ubiquitin-conjugating enzyme (UBC) mRNA, complete cds Length = 780 Score = 97.6 bits (49), Expect = 4e-17 Identities = 180/221 (81%), Gaps = 2/221 (0%) Strand = Plus / Minus Query: 342 cacctttgatactgtcaatgcagggctccatttgctccttcaagatatcaagacagatgc 401 |||||| |||||||| | ||||||||||| | |||| |||| || |||||||| |||| Sbjct: 438 caccttggatactgtaagagcagggctccact-gctctttcagaatgtcaagacatatgc 380 Query: 402 ttccattgctgttgatatttgggtggaaaaccttttgttttaaatgcaaccttgggtggc 461 |||||||| ||| |||||| ||||| || ||| ||||||||||| | |||||| |||||| Sbjct: 379 ttccattgttgtagatattagggtgaaagacc-tttgttttaaaagaaacctttggtggc 321 Query: 462 ttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacaccaccagcatatggg 521 || ||||| ||||| || || |||||||| | || | ||||||||||||||||| ||| Sbjct: 320 ttaaatggatagtctggtgggaagtgaatgttcactaggaatacaccaccagcataaggg 261 Query: 522 ctttcagatggacccatgatcgtcgcttgccagtggaacat 562 || || | |||||||| || || |||||||| || ||||| Sbjct: 260 ctgtctgcgggacccataattgttgcttgccaatgaaacat 220
>gb|BT013767.1| Lycopersicon esculentum clone 132651R, mRNA sequence Length = 844 Score = 97.6 bits (49), Expect = 4e-17 Identities = 155/189 (82%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||| ||||| || ||||||||||||||||| || || ||||||||||| ||| | || Sbjct: 425 atatccagacaaatacttccattgctgttgatgttgggatggaaaacctta-gttctgaa 367 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 |||||||| || ||||| || || || || || || || ||||| | |||||||||||| Sbjct: 366 ggcaacctttggaggcttaaaaggataatctggagggaaatgaattgaaaccaaaaatac 307 Query: 506 accaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatc 565 ||| |||||||| ||||| || | || |||||||| || |||||||| ||||||||||| Sbjct: 306 acctccagcataagggctatcggtaggccccatgattgttgcttgccaatggaacatatc 247 Query: 566 ttctgccac 574 |||||||| Sbjct: 246 ctctgccac 238
>gb|AY491500.1| Capsicum annuum ubiquitin-conjugating enzyme E2 mRNA, complete cds Length = 779 Score = 97.6 bits (49), Expect = 4e-17 Identities = 241/301 (80%), Gaps = 3/301 (0%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 |||||||||| || |||||||| || |||| ||||| ||||||||||| ||||| | | Sbjct: 430 tcttgtacatatgagcaatctcaggaaccagagggtcatcggggtttggatccgtcaaga 371 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 | ||||||||| ||||| || ||||| || | ||||| || |||||||||| | ||||| Sbjct: 370 gtgagcagatt-gaaagcagaaccttggaaatagtcaaggcggggctccatt-gttcctt 313 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttt 441 ||| || || | || || || |||||||| || |||||||| |||||||| |||||| Sbjct: 312 caatatgtccaagcatatactgccattgctattaatatttggatggaaaac-ttttgtcc 254 Query: 442 taaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaa 501 |||| |||||||| || || ||||| || || || || ||||| |||||||| || |||| Sbjct: 253 taaaagcaaccttaggaggtttgaaaggataatcaggaggaaaatgaatagtgactaaaa 194 Query: 502 atacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaaca 561 ||||||| |||||||| || || || | || ||||| ||||| ||||||||||| |||| Sbjct: 193 atacacccccagcataaggactatctggagggcccattatcgtagcttgccagtgaaaca 134 Query: 562 t 562 | Sbjct: 133 t 133
>dbj|AK099284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023129D13, full insert sequence Length = 754 Score = 97.6 bits (49), Expect = 4e-17 Identities = 168/205 (81%), Gaps = 2/205 (0%) Strand = Plus / Minus Query: 364 gggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatttgg 423 |||||||||| | ||||| | ||| ||||| || ||||| || ||||||||||| ||||| Sbjct: 389 gggctccattgg-tccttaaggatgtcaaggcaaatgctcccgttgctgttgatgtttgg 331 Query: 424 gtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaa 483 ||||||||||| || ||| || ||||||||||| ||||| || || || || || | Sbjct: 330 atggaaaaccttg-gtgcgaaacgccaccttgggtggtttgaagggataatcaggaggga 272 Query: 484 agtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcg 543 |||| || ||||| | || || ||||||||||||||||| |||||||||||||| |||| Sbjct: 271 agtggatggtaactaggaaaactccaccagcatatgggctatcagatggacccattatcg 212 Query: 544 tcgcttgccagtggaacatatcttc 568 | || |||||||||||||| ||||| Sbjct: 211 ttgcctgccagtggaacatgtcttc 187
>dbj|AK063826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-A09, full insert sequence Length = 767 Score = 97.6 bits (49), Expect = 4e-17 Identities = 168/205 (81%), Gaps = 2/205 (0%) Strand = Plus / Minus Query: 364 gggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatttgg 423 |||||||||| | ||||| | ||| ||||| || ||||| || ||||||||||| ||||| Sbjct: 399 gggctccattgg-tccttaaggatgtcaaggcaaatgctcccgttgctgttgatgtttgg 341 Query: 424 gtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaa 483 ||||||||||| || ||| || ||||||||||| ||||| || || || || || | Sbjct: 340 atggaaaaccttg-gtgcgaaacgccaccttgggtggtttgaagggataatcaggaggga 282 Query: 484 agtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcg 543 |||| || ||||| | || || ||||||||||||||||| |||||||||||||| |||| Sbjct: 281 agtggatggtaactaggaaaactccaccagcatatgggctatcagatggacccattatcg 222 Query: 544 tcgcttgccagtggaacatatcttc 568 | || |||||||||||||| ||||| Sbjct: 221 ttgcctgccagtggaacatgtcttc 197
>gb|L23762.1|TOM1KUC Lycopersicon esculentum ubiquitin carrier protein (Ubc) mRNA, complete cds Length = 825 Score = 97.6 bits (49), Expect = 4e-17 Identities = 155/189 (82%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||| ||||| || ||||||||||||||||| || || ||||||||||| ||| | || Sbjct: 429 atatccagacaaatacttccattgctgttgatgttgggatggaaaacctta-gttctgaa 371 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 |||||||| || ||||| || || || || || || || ||||| | |||||||||||| Sbjct: 370 ggcaacctttggaggcttaaaaggataatctggagggaaatgaattgaaaccaaaaatac 311 Query: 506 accaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatc 565 ||| |||||||| ||||| || | || |||||||| || |||||||| ||||||||||| Sbjct: 310 acctccagcataagggctatcggtaggccccatgattgttgcttgccaatggaacatatc 251 Query: 566 ttctgccac 574 |||||||| Sbjct: 250 ctctgccac 242
>dbj|AB074411.1| Oryza sativa (japonica cultivar-group) mRNA for ubiquitin-conjugating enzyme OsUBC5a, complete cds Length = 731 Score = 97.6 bits (49), Expect = 4e-17 Identities = 168/205 (81%), Gaps = 2/205 (0%) Strand = Plus / Minus Query: 364 gggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatttgg 423 |||||||||| | ||||| | ||| ||||| || ||||| || ||||||||||| ||||| Sbjct: 387 gggctccattgg-tccttaaggatgtcaaggcaaatgctcccgttgctgttgatgtttgg 329 Query: 424 gtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaa 483 ||||||||||| || ||| || ||||||||||| ||||| || || || || || | Sbjct: 328 atggaaaaccttg-gtgcgaaacgccaccttgggtggtttgaagggataatcaggaggga 270 Query: 484 agtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcg 543 |||| || ||||| | || || ||||||||||||||||| |||||||||||||| |||| Sbjct: 269 agtggatggtaactaggaaaactccaccagcatatgggctatcagatggacccattatcg 210 Query: 544 tcgcttgccagtggaacatatcttc 568 | || |||||||||||||| ||||| Sbjct: 209 ttgcctgccagtggaacatgtcttc 185
>ref|NM_111703.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT3G08690 mRNA, complete cds Length = 724 Score = 93.7 bits (47), Expect = 6e-16 Identities = 183/226 (80%), Gaps = 2/226 (0%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| |||| ||||| |||||||| || || ||||||||||| ||||| || Sbjct: 390 gcagggctccatt-gctctttcaaaatatcaaggcaaatacttccattgctattgatgtt 332 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||| ||| | ||||| || ||||| | ||||| ||||||||||| || || ||||| | Sbjct: 331 tggatggtacacctta-gtcttaaaagacacctttggtggcttgaaaggataatccggag 273 Query: 481 gaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatga 540 | || ||||||| ||||||||| || || || ||||| || ||||||| || ||||||| Sbjct: 272 ggaaatgaatagaaaccaaaaacactcctccggcatacggactttcaggaggtcccatga 213 Query: 541 tcgtcgcttgccagtggaacatatcttctgccacangaccggcgct 586 | || |||||||| |||||||| || || ||||| |||| ||||| Sbjct: 212 tagtggcttgccaatggaacatgtcctcagccaccggaccagcgct 167
>gb|AY091223.1| Arabidopsis thaliana putative ubiquitin conjugating enzyme 11 (UBC11) (At3g08690) mRNA, complete cds Length = 478 Score = 93.7 bits (47), Expect = 6e-16 Identities = 183/226 (80%), Gaps = 2/226 (0%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| |||| ||||| |||||||| || || ||||||||||| ||||| || Sbjct: 287 gcagggctccatt-gctctttcaaaatatcaaggcaaatacttccattgctattgatgtt 229 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||| ||| | ||||| || ||||| | ||||| ||||||||||| || || ||||| | Sbjct: 228 tggatggtacacctta-gtcttaaaagacacctttggtggcttgaaaggataatccggag 170 Query: 481 gaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatga 540 | || ||||||| ||||||||| || || || ||||| || ||||||| || ||||||| Sbjct: 169 ggaaatgaatagaaaccaaaaacactcctccggcatacggactttcaggaggtcccatga 110 Query: 541 tcgtcgcttgccagtggaacatatcttctgccacangaccggcgct 586 | || |||||||| |||||||| || || ||||| |||| ||||| Sbjct: 109 tagtggcttgccaatggaacatgtcctcagccaccggaccagcgct 64
>gb|AY063869.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC11 (At3g08690) mRNA, complete cds Length = 733 Score = 93.7 bits (47), Expect = 6e-16 Identities = 183/226 (80%), Gaps = 2/226 (0%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| |||| ||||| |||||||| || || ||||||||||| ||||| || Sbjct: 383 gcagggctccatt-gctctttcaaaatatcaaggcaaatacttccattgctattgatgtt 325 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||| ||| | ||||| || ||||| | ||||| ||||||||||| || || ||||| | Sbjct: 324 tggatggtacacctta-gtcttaaaagacacctttggtggcttgaaaggataatccggag 266 Query: 481 gaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatga 540 | || ||||||| ||||||||| || || || ||||| || ||||||| || ||||||| Sbjct: 265 ggaaatgaatagaaaccaaaaacactcctccggcatacggactttcaggaggtcccatga 206 Query: 541 tcgtcgcttgccagtggaacatatcttctgccacangaccggcgct 586 | || |||||||| |||||||| || || ||||| |||| ||||| Sbjct: 205 tagtggcttgccaatggaacatgtcctcagccaccggaccagcgct 160
>gb|AY639585.1| Picea abies ubiquitin-conjugating enzyme UBC1 mRNA, complete cds Length = 478 Score = 93.7 bits (47), Expect = 6e-16 Identities = 266/335 (79%), Gaps = 3/335 (0%) Strand = Plus / Minus Query: 204 cccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctc 263 ||||| || |||||||| ||||| ||||| || ||||||||||| || | | ||| || Sbjct: 332 cccattgcatacttctgagtccaactccttgcggtggactcatatttgcccctgtcagtc 273 Query: 264 ttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagtaga 323 |||||||| || |||||||| || || | || || || |||||||| ||||| | | | Sbjct: 272 ttgtacatatgagcaatctctggtacaagaggatcatctgggtttggatccgtcaacaaa 213 Query: 324 gagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctccttca 383 ||||| ||| ||||| | ||||| || | |||||| ||||| ||||| | | ||||| | Sbjct: 212 gagcaaatt-gaaagcaagaccttggagattgtcaaagcaggactccact-gttccttta 155 Query: 384 agatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgtttta 443 |||| ||||| ||||| ||||||||| | || ||||||||||||||||| ||| || || Sbjct: 154 agatgtcaaggcagatacttccattgttatttatatttgggtggaaaac-tttagtccta 96 Query: 444 aatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaat 503 || |||||||| || ||||||||||| || || || |||||||||||||| || | |||| Sbjct: 95 aaagcaacctttgggggcttgaatggataatcaggtggaaagtgaatagtcacaagaaat 36 Query: 504 acaccaccagcatatgggctttcagatggacccat 538 || || || ||||| ||||| ||||| || ||||| Sbjct: 35 acgccccctgcataggggctgtcagaaggtcccat 1
>gb|AY109411.1| Zea mays CL25406_3 mRNA sequence Length = 1037 Score = 93.7 bits (47), Expect = 6e-16 Identities = 284/359 (79%), Gaps = 3/359 (0%) Strand = Plus / Plus Query: 210 gcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctcttgtac 269 |||||| ||||||||||| ||||||| ||| ||| ||||| ||||| |||||||| Sbjct: 96 gcgtacctctgggtccaggtcctcgcggtgttctcgtacttgttccggtccgtcttgtac 155 Query: 270 atgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagtagagagcag 329 |||||||| ||||| ||||||| || ||||||||||| || || || || || |||||| Sbjct: 156 atgtgcgctatctcggggaccagaggatcgtcggggttcggatcggtcagcagggagcag 215 Query: 330 atttgaaaggagcacctttgatactgtcaatgcagggctccatttgctccttcaagatat 389 || || || |||||||| || | || | || |||||||| | | ||||||| ||| | Sbjct: 216 atg-gacagcagcaccttggagatggttagcgccgggctccactgg-tccttcaggatgt 273 Query: 390 caagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaatgca 449 |||| |||||||| || ||||||||||| ||||| ||||| ||||| || ||||| Sbjct: 274 caaggcagatgctcccgttgctgttgatgtttggatggaacaccttg-gtgcggaatgcc 332 Query: 450 accttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacca 509 ||||| ||||| ||||| || || || || ||||| || || ||||| | || |||||| Sbjct: 333 acctttggtggtttgaaaggataatcgggaggaaaatggattgtaactaggaaaacacca 392 Query: 510 ccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatcttc 568 |||| ||||||||| ||||| |||||||| || || || ||||||||||| |||||||| Sbjct: 393 ccagaatatgggctatcagaaggacccattattgttgcctgccagtggaatatatcttc 451
>gb|DQ027025.1| Arabidopsis thaliana ubiquitinating enzyme (At3g08690) mRNA, complete cds Length = 447 Score = 93.7 bits (47), Expect = 6e-16 Identities = 183/226 (80%), Gaps = 2/226 (0%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| |||| ||||| |||||||| || || ||||||||||| ||||| || Sbjct: 287 gcagggctccatt-gctctttcaaaatatcaaggcaaatacttccattgctattgatgtt 229 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||| ||| | ||||| || ||||| | ||||| ||||||||||| || || ||||| | Sbjct: 228 tggatggtacacctta-gtcttaaaagacacctttggtggcttgaaaggataatccggag 170 Query: 481 gaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatga 540 | || ||||||| ||||||||| || || || ||||| || ||||||| || ||||||| Sbjct: 169 ggaaatgaatagaaaccaaaaacactcctccggcatacggactttcaggaggtcccatga 110 Query: 541 tcgtcgcttgccagtggaacatatcttctgccacangaccggcgct 586 | || |||||||| |||||||| || || ||||| |||| ||||| Sbjct: 109 tagtggcttgccaatggaacatgtcctcagccaccggaccagcgct 64
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 462 ttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacaccaccagcatatggg 521 |||||||| || || || ||||| ||||| ||||||||||| || || |||||||| ||| Sbjct: 9116397 ttgaatggataatcaggaggaaaatgaatggtaaccaaaaacacgcctccagcataaggg 9116338 Query: 522 ctttcagatggacccatgatcgtcgcttgccagtggaacatatcttctgccaca 575 || || ||||||||||| | || || ||||||||||||||||||||||||||| Sbjct: 9116337 ctatctgatggacccatcagtgttgcctgccagtggaacatatcttctgccaca 9116284 Score = 75.8 bits (38), Expect = 1e-10 Identities = 72/82 (87%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 355 gtcaatgcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgtt 414 ||||||||||| ||||| | ||||||||||||||||||| || |||||||| ||||| || Sbjct: 9117631 gtcaatgcaggactccact-gctccttcaagatatcaaggcatatgcttccgttgctatt 9117573 Query: 415 gatatttgggtggaaaaccttt 436 || ||||||||||| |||||| Sbjct: 9117572 aatgtttgggtggaacaccttt 9117551 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 202 agcccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgc 261 ||||||| || || ||||||||||||||||| || |||||||| ||||| || || || Sbjct: 9118306 agcccatagcatatttctgggtccagctccttgcggtggactcgtacttggcccgatcag 9118247 Query: 262 tcttgtacatgtgcgcaatctccgggaccaa 292 ||||||||||||| |||||||| || ||||| Sbjct: 9118246 tcttgtacatgtgagcaatctctggaaccaa 9118216 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 534 cccatgatcgtcgcttgccagtggaacat 562 |||||||| || ||||||||||||||||| Sbjct: 1078803 cccatgattgttgcttgccagtggaacat 1078775
>dbj|AP005777.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0026F09 Length = 124371 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 462 ttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacaccaccagcatatggg 521 |||||||| || || || ||||| ||||| ||||||||||| || || |||||||| ||| Sbjct: 19160 ttgaatggataatcaggaggaaaatgaatggtaaccaaaaacacgcctccagcataaggg 19101 Query: 522 ctttcagatggacccatgatcgtcgcttgccagtggaacatatcttctgccaca 575 || || ||||||||||| | || || ||||||||||||||||||||||||||| Sbjct: 19100 ctatctgatggacccatcagtgttgcctgccagtggaacatatcttctgccaca 19047 Score = 75.8 bits (38), Expect = 1e-10 Identities = 72/82 (87%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 355 gtcaatgcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgtt 414 ||||||||||| ||||| | ||||||||||||||||||| || |||||||| ||||| || Sbjct: 20394 gtcaatgcaggactccact-gctccttcaagatatcaaggcatatgcttccgttgctatt 20336 Query: 415 gatatttgggtggaaaaccttt 436 || ||||||||||| |||||| Sbjct: 20335 aatgtttgggtggaacaccttt 20314 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 202 agcccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgc 261 ||||||| || || ||||||||||||||||| || |||||||| ||||| || || || Sbjct: 21069 agcccatagcatatttctgggtccagctccttgcggtggactcgtacttggcccgatcag 21010 Query: 262 tcttgtacatgtgcgcaatctccgggaccaa 292 ||||||||||||| |||||||| || ||||| Sbjct: 21009 tcttgtacatgtgagcaatctctggaaccaa 20979
>gb|U17250.1|BCSC1 Brassica oleracea ubiquitine conjugating enzyme mRNA, partial cds Length = 607 Score = 91.7 bits (46), Expect = 2e-15 Identities = 159/195 (81%), Gaps = 4/195 (2%) Strand = Plus / Minus Query: 389 tcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaatgc 448 |||||||||||||| |||||||||||||||| ||||| ||||||| | | || | Sbjct: 203 tcaagacagatgctgccattgctgttgatatc--ggtggtaaacctt--ggtgcgaaaga 148 Query: 449 aaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacc 508 |||||| ||||||||||| ||||| || || || |||||||| | ||| | ||| ||||| Sbjct: 147 aacctttggtggcttgaaggggtaatctggtgggaagtgaatggaaacaagaaacacacc 88 Query: 509 accagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatcttc 568 || | ||||||| |||| |||||||||||| ||||||||||||||||||||||| || Sbjct: 87 tccggagaatgggctatcagttggacccatgatagtcgcttgccagtggaacatatcatc 28 Query: 569 tgccacangaccggc 583 ||||| ||||||| Sbjct: 27 acccacaggaccggc 13
>gb|L29077.1|PEAUBC4 Pisum sativum ubiquitin conjugating enzyme (UBC4), complete cds Length = 909 Score = 91.7 bits (46), Expect = 2e-15 Identities = 174/214 (81%), Gaps = 2/214 (0%) Strand = Plus / Minus Query: 355 gtcaatgcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgtt 414 |||| |||||||||||||| ||||||||| |||||||||||| || || || ||||| || Sbjct: 464 gtcagtgcagggctccatt-gctccttcaggatatcaagacaaatactcccgttgctatt 406 Query: 415 gatatttgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagt 474 ||| || || || || ||||| || | ||||||||||| || |||||||| || || | Sbjct: 405 gatgttcggatgaaagacctta-gtcctgaatgcaaccttaggaggcttgaaaggataat 347 Query: 475 ccgggggaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggac 534 | || ||||| ||||| ||||||||||| ||||| |||||||| || || |||| |||| Sbjct: 346 ctggaggaaaatgaatggtaaccaaaaaaacacctccagcatacggactatcagccggac 287 Query: 535 ccatgatcgtcgcttgccagtggaacatatcttc 568 ||| || || |||||||| |||||||| ||||| Sbjct: 286 ccacaattgttgcttgccaatggaacatgtcttc 253
>ref|NM_001036151.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G64230 transcript variant AT1G64230.2 mRNA, complete cds Length = 885 Score = 89.7 bits (45), Expect = 1e-14 Identities = 154/189 (81%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 380 ttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgt 439 ||||| || ||||| || ||||||||||||||||||| ||| |||||||| || |||||| Sbjct: 391 ttcaaaatgtcaaggcaaatgcttccattgctgttgacattagggtggaacac-ttttgt 333 Query: 440 tttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaa 499 | ||||||||||| ||||| ||||| || || ||||| || |||||||| || || | Sbjct: 332 cctgaatgcaacctttggtggtttgaaaggataatccggagggaagtgaatggttacgag 273 Query: 500 aaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaa 559 ||| ||||| || | ||| || || |||||||||||||| || || |||||||| || || Sbjct: 272 aaagacaccgcctgaataaggactatcagatggacccattattgtagcttgccaatgaaa 213 Query: 560 catatcttc 568 ||| ||||| Sbjct: 212 catgtcttc 204 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 216 ttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctcttgtacatgtgc 275 ||||| |||||||| ||||| || ||||||||||| || | ||| | ||||||||||| Sbjct: 553 ttctgagtccagcttctcgcagtagactcatactttgctctatcggttttgtacatgtga 494 Query: 276 gcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 |||||||| || ||||| || || || |||||||||||||||| Sbjct: 493 gcaatctctggaaccaatggatcatctgggtttgggtccgtta 451
>ref|NM_105097.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G64230 transcript variant AT1G64230.1 mRNA, complete cds Length = 846 Score = 89.7 bits (45), Expect = 1e-14 Identities = 154/189 (81%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 380 ttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgt 439 ||||| || ||||| || ||||||||||||||||||| ||| |||||||| || |||||| Sbjct: 403 ttcaaaatgtcaaggcaaatgcttccattgctgttgacattagggtggaacac-ttttgt 345 Query: 440 tttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaa 499 | ||||||||||| ||||| ||||| || || ||||| || |||||||| || || | Sbjct: 344 cctgaatgcaacctttggtggtttgaaaggataatccggagggaagtgaatggttacgag 285 Query: 500 aaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaa 559 ||| ||||| || | ||| || || |||||||||||||| || || |||||||| || || Sbjct: 284 aaagacaccgcctgaataaggactatcagatggacccattattgtagcttgccaatgaaa 225 Query: 560 catatcttc 568 ||| ||||| Sbjct: 224 catgtcttc 216 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 216 ttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctcttgtacatgtgc 275 ||||| |||||||| ||||| || ||||||||||| || | ||| | ||||||||||| Sbjct: 565 ttctgagtccagcttctcgcagtagactcatactttgctctatcggttttgtacatgtga 506 Query: 276 gcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 |||||||| || ||||| || || || |||||||||||||||| Sbjct: 505 gcaatctctggaaccaatggatcatctgggtttgggtccgtta 463
>gb|AY489135.1| Capsicum annuum ubiquitin-conjugating enzyme 8 mRNA, complete cds Length = 713 Score = 89.7 bits (45), Expect = 1e-14 Identities = 167/205 (81%), Gaps = 2/205 (0%) Strand = Plus / Minus Query: 364 gggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatttgg 423 |||||||||| | |||||||| || || || || ||||| || ||||||||||||||||| Sbjct: 343 gggctccatt-gttccttcaaaatgtcgaggcaaatgctaccgttgctgttgatatttgg 285 Query: 424 gtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaa 483 ||| || ||||| || |||| || ||||| || ||||||||||| || || || |||| Sbjct: 284 gtgaaataccttg-gtcctaaaagctacctttggaggcttgaatggataatcaggtggaa 226 Query: 484 agtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcg 543 | ||||| || || | ||| || || |||||||| || || |||||||||||||| | | Sbjct: 225 aatgaatggtcacaagaaacactccgccagcataaggactgtcagatggacccataagtg 166 Query: 544 tcgcttgccagtggaacatatcttc 568 ||||||||||||| ||||||||||| Sbjct: 165 tcgcttgccagtgaaacatatcttc 141 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 204 cccatcgcgtacttctgggtccagctcct 232 |||||||| ||||| |||||||||||||| Sbjct: 502 cccatcgcatacttttgggtccagctcct 474
>gb|AY133670.1| Arabidopsis thaliana At1g64230/F22C12_17 mRNA, complete cds Length = 447 Score = 89.7 bits (45), Expect = 1e-14 Identities = 154/189 (81%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 380 ttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgt 439 ||||| || ||||| || ||||||||||||||||||| ||| |||||||| || |||||| Sbjct: 269 ttcaaaatgtcaaggcaaatgcttccattgctgttgacattagggtggaacac-ttttgt 211 Query: 440 tttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaa 499 | ||||||||||| ||||| ||||| || || ||||| || |||||||| || || | Sbjct: 210 cctgaatgcaacctttggtggtttgaaaggataatccggagggaagtgaatggttacgag 151 Query: 500 aaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaa 559 ||| ||||| || | ||| || || |||||||||||||| || || |||||||| || || Sbjct: 150 aaagacaccgcctgaataaggactatcagatggacccattattgtagcttgccaatgaaa 91 Query: 560 catatcttc 568 ||| ||||| Sbjct: 90 catgtcttc 82 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 216 ttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctcttgtacatgtgc 275 ||||| |||||||| ||||| || ||||||||||| || | ||| | ||||||||||| Sbjct: 431 ttctgagtccagcttctcgcagtagactcatactttgctctatcggttttgtacatgtga 372 Query: 276 gcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 |||||||| || ||||| || || || |||||||||||||||| Sbjct: 371 gcaatctctggaaccaatggatcatctgggtttgggtccgtta 329
>gb|AF385718.1|AF385718 Arabidopsis thaliana At1g64230/F22C12_17 mRNA, complete cds Length = 738 Score = 89.7 bits (45), Expect = 1e-14 Identities = 154/189 (81%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 380 ttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgt 439 ||||| || ||||| || ||||||||||||||||||| ||| |||||||| || |||||| Sbjct: 395 ttcaaaatgtcaaggcaaatgcttccattgctgttgacattagggtggaacac-ttttgt 337 Query: 440 tttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaa 499 | ||||||||||| ||||| ||||| || || ||||| || |||||||| || || | Sbjct: 336 cctgaatgcaacctttggtggtttgaaaggataatccggagggaagtgaatggttacgag 277 Query: 500 aaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaa 559 ||| ||||| || | ||| || || |||||||||||||| || || |||||||| || || Sbjct: 276 aaagacaccgcctgaataaggactatcagatggacccattattgtagcttgccaatgaaa 217 Query: 560 catatcttc 568 ||| ||||| Sbjct: 216 catgtcttc 208 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 216 ttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctcttgtacatgtgc 275 ||||| |||||||| ||||| || ||||||||||| || | ||| | ||||||||||| Sbjct: 557 ttctgagtccagcttctcgcagtagactcatactttgctctatcggttttgtacatgtga 498 Query: 276 gcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 |||||||| || ||||| || || || |||||||||||||||| Sbjct: 497 gcaatctctggaaccaatggatcatctgggtttgggtccgtta 455
>emb|BX815683.1|CNS0ABHQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS83ZF06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 776 Score = 89.7 bits (45), Expect = 1e-14 Identities = 154/189 (81%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 380 ttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgt 439 ||||| || ||||| || ||||||||||||||||||| ||| |||||||| || |||||| Sbjct: 373 ttcaaaatgtcaaggcaaatgcttccattgctgttgacattagggtggaacac-ttttgt 315 Query: 440 tttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaa 499 | ||||||||||| ||||| ||||| || || ||||| || |||||||| || || | Sbjct: 314 cctgaatgcaacctttggtggtttgaaaggataatccggagggaagtgaatggttacgag 255 Query: 500 aaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaa 559 ||| ||||| || | ||| || || |||||||||||||| || || |||||||| || || Sbjct: 254 aaagacaccgcctgaataaggactatcagatggacccattattgtagcttgccaatgaaa 195 Query: 560 catatcttc 568 ||| ||||| Sbjct: 194 catgtcttc 186 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 216 ttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctcttgtacatgtgc 275 ||||| |||||||| ||||| || ||||||||||| || | ||| | ||||||||||| Sbjct: 535 ttctgagtccagcttctcgcagtagactcatactttgctctatcggttttgtacatgtga 476 Query: 276 gcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 |||||||| || ||||| || || || |||||||||||||||| Sbjct: 475 gcaatctctggaaccaatggatcatctgggtttgggtccgtta 433
>emb|BX816699.1|CNS0ABXP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH63ZG10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 782 Score = 89.7 bits (45), Expect = 1e-14 Identities = 154/189 (81%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 380 ttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgt 439 ||||| || ||||| || ||||||||||||||||||| ||| |||||||| || |||||| Sbjct: 402 ttcaaaatgtcaaggcaaatgcttccattgctgttgacattagggtggaacac-ttttgt 344 Query: 440 tttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaa 499 | ||||||||||| ||||| ||||| || || ||||| || |||||||| || || | Sbjct: 343 cctgaatgcaacctttggtggtttgaaaggataatccggagggaagtgaatggttacgag 284 Query: 500 aaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaa 559 ||| ||||| || | ||| || || |||||||||||||| || || |||||||| || || Sbjct: 283 aaagacaccgcctgaataaggactatcagatggacccattattgtagcttgccaatgaaa 224 Query: 560 catatcttc 568 ||| ||||| Sbjct: 223 catgtcttc 215 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 216 ttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctcttgtacatgtgc 275 ||||| |||||||| ||||| || ||||||||||| || | ||| | ||||||||||| Sbjct: 564 ttctgagtccagcttctcgcagtagactcatactttgctctatcggttttgtacatgtga 505 Query: 276 gcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 |||||||| || ||||| || || || |||||||||||||||| Sbjct: 504 gcaatctctggaaccaatggatcatctgggtttgggtccgtta 462
>gb|AF176040.1|AF176040 Mesembryanthemum crystallinum ubiquitin-conjugating enzyme UBC2 (Ubc2) mRNA, complete cds Length = 809 Score = 89.7 bits (45), Expect = 1e-14 Identities = 167/205 (81%), Gaps = 2/205 (0%) Strand = Plus / Minus Query: 364 gggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatttgg 423 |||||||||| ||||||||||||| || || || |||||||||||||| ||||||||||| Sbjct: 364 gggctccatt-gctccttcaagatgtcgaggcaaatgcttccattgctattgatatttgg 306 Query: 424 gtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaa 483 ||| |||||| ||||| | || || ||||||||||| || ||||| || || || || | Sbjct: 305 gtgaaaaacc-tttgtcctgaaagctaccttgggtggtttaaatggataatctggaggga 247 Query: 484 agtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcg 543 ||||||| ||||| | || | || || |||||||| || ||||| || ||||| || | Sbjct: 246 agtgaatggtaactaggaaaagccctcctgcatatggactgtcagaaggtcccataatgg 187 Query: 544 tcgcttgccagtggaacatatcttc 568 | |||||||| |||||||| ||||| Sbjct: 186 ttgcttgccaatggaacatgtcttc 162 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 202 agcccatcgcgtacttctgggtccagctcctcgctgtg 239 |||||||||| ||||||||||||||||||||||||||| Sbjct: 525 agcccatcgcatacttctgggtccagctcctcgctgtg 488
>gb|DQ027041.1| Arabidopsis thaliana ubiquitinating enzyme (At1g64230) mRNA, complete cds Length = 447 Score = 89.7 bits (45), Expect = 1e-14 Identities = 154/189 (81%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 380 ttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgt 439 ||||| || ||||| || ||||||||||||||||||| ||| |||||||| || |||||| Sbjct: 269 ttcaaaatgtcaaggcaaatgcttccattgctgttgacattagggtggaacac-ttttgt 211 Query: 440 tttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaa 499 | ||||||||||| ||||| ||||| || || ||||| || |||||||| || || | Sbjct: 210 cctgaatgcaacctttggtggtttgaaaggataatccggagggaagtgaatggttacgag 151 Query: 500 aaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaa 559 ||| ||||| || | ||| || || |||||||||||||| || || |||||||| || || Sbjct: 150 aaagacaccgcctgaataaggactatcagatggacccattattgtagcttgccaatgaaa 91 Query: 560 catatcttc 568 ||| ||||| Sbjct: 90 catgtcttc 82 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 216 ttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctcttgtacatgtgc 275 ||||| |||||||| ||||| || ||||||||||| || | ||| | ||||||||||| Sbjct: 431 ttctgagtccagcttctcgcagtagactcatactttgctctatcggttttgtacatgtga 372 Query: 276 gcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 |||||||| || ||||| || || || |||||||||||||||| Sbjct: 371 gcaatctctggaaccaatggatcatctgggtttgggtccgtta 329
>gb|DQ249816.1| Capsicum annuum ubiquitin-conjugating enzyme E2 mRNA, complete cds Length = 678 Score = 89.7 bits (45), Expect = 1e-14 Identities = 167/205 (81%), Gaps = 2/205 (0%) Strand = Plus / Minus Query: 364 gggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatttgg 423 |||||||||| | |||||||| || || || || ||||| || ||||||||||||||||| Sbjct: 354 gggctccatt-gttccttcaaaatgtcgaggcaaatgctaccgttgctgttgatatttgg 296 Query: 424 gtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaa 483 ||| || ||||| || |||| || ||||| || ||||||||||| || || || |||| Sbjct: 295 gtgaaataccttg-gtcctaaaagctacctttggaggcttgaatggataatcaggtggaa 237 Query: 484 agtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcg 543 | ||||| || || | ||| || || |||||||| || || |||||||||||||| | | Sbjct: 236 aatgaatggtcacaagaaacactccgccagcataaggactgtcagatggacccataagtg 177 Query: 544 tcgcttgccagtggaacatatcttc 568 ||||||||||||| ||||||||||| Sbjct: 176 tcgcttgccagtgaaacatatcttc 152 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 204 cccatcgcgtacttctgggtccagctcct 232 |||||||| ||||| |||||||||||||| Sbjct: 513 cccatcgcatacttttgggtccagctcct 485
>ref|NM_180784.1| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript variant AT5G41700.2 mRNA, complete cds Length = 909 Score = 87.7 bits (44), Expect = 4e-14 Identities = 115/136 (84%), Gaps = 2/136 (1%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| | || ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 463 gcagggctccatt-gttctttcaaaatgtcaaggcaaatgcttccgttgctgttgatatt 405 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||||| || ||||| || ||||||||||||| ||||| |||||||| |||||||| | Sbjct: 404 agggtgaaacaccttc-gtcctaaatgcaacctttggtggtttgaatggatagtccggag 346 Query: 481 gaaagtgaatagtaac 496 | |||||||| ||||| Sbjct: 345 ggaagtgaatggtaac 330
>ref|NM_123535.2| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript variant AT5G41700.4 mRNA, complete cds Length = 803 Score = 87.7 bits (44), Expect = 4e-14 Identities = 115/136 (84%), Gaps = 2/136 (1%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| | || ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 357 gcagggctccatt-gttctttcaaaatgtcaaggcaaatgcttccgttgctgttgatatt 299 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||||| || ||||| || ||||||||||||| ||||| |||||||| |||||||| | Sbjct: 298 agggtgaaacaccttc-gtcctaaatgcaacctttggtggtttgaatggatagtccggag 240 Query: 481 gaaagtgaatagtaac 496 | |||||||| ||||| Sbjct: 239 ggaagtgaatggtaac 224
>ref|NM_180785.1| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript variant AT5G41700.3 mRNA, complete cds Length = 1006 Score = 87.7 bits (44), Expect = 4e-14 Identities = 115/136 (84%), Gaps = 2/136 (1%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| | || ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 367 gcagggctccatt-gttctttcaaaatgtcaaggcaaatgcttccgttgctgttgatatt 309 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||||| || ||||| || ||||||||||||| ||||| |||||||| |||||||| | Sbjct: 308 agggtgaaacaccttc-gtcctaaatgcaacctttggtggtttgaatggatagtccggag 250 Query: 481 gaaagtgaatagtaac 496 | |||||||| ||||| Sbjct: 249 ggaagtgaatggtaac 234
>ref|NM_180783.1| Arabidopsis thaliana UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubiquitin conjugating enzyme AT5G41700 (UBC8) transcript variant AT5G41700.1 mRNA, complete cds Length = 864 Score = 87.7 bits (44), Expect = 4e-14 Identities = 115/136 (84%), Gaps = 2/136 (1%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| | || ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 418 gcagggctccatt-gttctttcaaaatgtcaaggcaaatgcttccgttgctgttgatatt 360 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||||| || ||||| || ||||||||||||| ||||| |||||||| |||||||| | Sbjct: 359 agggtgaaacaccttc-gtcctaaatgcaacctttggtggtttgaatggatagtccggag 301 Query: 481 gaaagtgaatagtaac 496 | |||||||| ||||| Sbjct: 300 ggaagtgaatggtaac 285
>gb|AY063074.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme 8 (At5g41700) mRNA, complete cds Length = 478 Score = 87.7 bits (44), Expect = 4e-14 Identities = 115/136 (84%), Gaps = 2/136 (1%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| | || ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 287 gcagggctccatt-gttctttcaaaatgtcaaggcaaatgcttccgttgctgttgatatt 229 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||||| || ||||| || ||||||||||||| ||||| |||||||| |||||||| | Sbjct: 228 agggtgaaacaccttc-gtcctaaatgcaacctttggtggtttgaatggatagtccggag 170 Query: 481 gaaagtgaatagtaac 496 | |||||||| ||||| Sbjct: 169 ggaagtgaatggtaac 154
>gb|AF370257.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC8 (At5g41700) mRNA, complete cds Length = 810 Score = 87.7 bits (44), Expect = 4e-14 Identities = 115/136 (84%), Gaps = 2/136 (1%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| | || ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 412 gcagggctccatt-gttctttcaaaatgtcaaggcaaatgcttccgttgctgttgatatt 354 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||||| || ||||| || ||||||||||||| ||||| |||||||| |||||||| | Sbjct: 353 agggtgaaacaccttc-gtcctaaatgcaacctttggtggtttgaatggatagtccggag 295 Query: 481 gaaagtgaatagtaac 496 | |||||||| ||||| Sbjct: 294 ggaagtgaatggtaac 279
>gb|AY072514.1| Arabidopsis thaliana ubiquitin-conjugating enzyme E2-17 kD 8 (MBK23.24) mRNA, complete cds Length = 476 Score = 87.7 bits (44), Expect = 4e-14 Identities = 115/136 (84%), Gaps = 2/136 (1%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| | || ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 287 gcagggctccatt-gttctttcaaaatgtcaaggcaaatgcttccgttgctgttgatatt 229 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||||| || ||||| || ||||||||||||| ||||| |||||||| |||||||| | Sbjct: 228 agggtgaaacaccttc-gtcctaaatgcaacctttggtggtttgaatggatagtccggag 170 Query: 481 gaaagtgaatagtaac 496 | |||||||| ||||| Sbjct: 169 ggaagtgaatggtaac 154
>gb|AY057631.1| Arabidopsis thaliana AT5g41700/MBK23_24 mRNA, complete cds Length = 653 Score = 87.7 bits (44), Expect = 4e-14 Identities = 115/136 (84%), Gaps = 2/136 (1%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| | || ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 353 gcagggctccatt-gttctttcaaaatgtcaaggcaaatgcttccgttgctgttgatatt 295 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||||| || ||||| || ||||||||||||| ||||| |||||||| |||||||| | Sbjct: 294 agggtgaaacaccttc-gtcctaaatgcaacctttggtggtttgaatggatagtccggag 236 Query: 481 gaaagtgaatagtaac 496 | |||||||| ||||| Sbjct: 235 ggaagtgaatggtaac 220
>gb|AY054595.1| Arabidopsis thaliana ubiquitin-conjugating enzyme E2-17 kD 8 (ubiquitin-protein ligase 8) (ubiquitin carrier protein 8) (MBK23.24) mRNA, complete cds Length = 755 Score = 87.7 bits (44), Expect = 4e-14 Identities = 115/136 (84%), Gaps = 2/136 (1%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| | || ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 463 gcagggctccatt-gttctttcaaaatgtcaaggcaaatgcttccgttgctgttgatatt 405 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||||| || ||||| || ||||||||||||| ||||| |||||||| |||||||| | Sbjct: 404 agggtgaaacaccttc-gtcctaaatgcaacctttggtggtttgaatggatagtccggag 346 Query: 481 gaaagtgaatagtaac 496 | |||||||| ||||| Sbjct: 345 ggaagtgaatggtaac 330
>gb|AF325009.2|AF325009 Arabidopsis thaliana AT5g41700 (AT5g41700/MBK23_24) mRNA, complete cds Length = 667 Score = 87.7 bits (44), Expect = 4e-14 Identities = 115/136 (84%), Gaps = 2/136 (1%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| | || ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 358 gcagggctccatt-gttctttcaaaatgtcaaggcaaatgcttccgttgctgttgatatt 300 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||||| || ||||| || ||||||||||||| ||||| |||||||| |||||||| | Sbjct: 299 agggtgaaacaccttc-gtcctaaatgcaacctttggtggtttgaatggatagtccggag 241 Query: 481 gaaagtgaatagtaac 496 | |||||||| ||||| Sbjct: 240 ggaagtgaatggtaac 225
>emb|BX832305.1|CNS0A1WR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH64ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 650 Score = 87.7 bits (44), Expect = 4e-14 Identities = 115/136 (84%), Gaps = 2/136 (1%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| | || ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 337 gcagggctccatt-gttctttcaaaatgtcaaggcaaatgcttccgttgctgttgatatt 279 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||||| || ||||| || ||||||||||||| ||||| |||||||| |||||||| | Sbjct: 278 agggtgaaacaccttc-gtcctaaatgcaacctttggtggtttgaatggatagtccggag 220 Query: 481 gaaagtgaatagtaac 496 | |||||||| ||||| Sbjct: 219 ggaagtgaatggtaac 204
>gb|AY085670.1| Arabidopsis thaliana clone 16865 mRNA, complete sequence Length = 747 Score = 87.7 bits (44), Expect = 4e-14 Identities = 115/136 (84%), Gaps = 2/136 (1%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| | || ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 418 gcagggctccatt-gttctttcaaaatgtcaaggcaaatgcttccgttgctgttgatatt 360 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||||| || ||||| || ||||||||||||| ||||||||||| || |||||||| | Sbjct: 359 agggtgaaacaccttc-gtcctaaatgcaacctttggtggcttgaaaggatagtccggag 301 Query: 481 gaaagtgaatagtaac 496 | |||||||| ||||| Sbjct: 300 ggaagtgaatggtaac 285 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Minus Query: 264 ttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 ||||||||||| |||||||| || || |||||||| || || ||||| ||||||| Sbjct: 514 ttgtacatgtgtgcaatctctggcactaacgggtcatctggatttggatccgtta 460
>dbj|AK117378.1| Arabidopsis thaliana At5g41080 mRNA for unknown protein, complete cds, clone: RAFL16-95-M21 Length = 2157 Score = 87.7 bits (44), Expect = 4e-14 Identities = 115/136 (84%), Gaps = 2/136 (1%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| | || ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 353 gcagggctccatt-gttctttcaaaatgtcaaggcaaatgcttccgttgctgttgatatt 295 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||||| || ||||| || ||||||||||||| ||||| |||||||| |||||||| | Sbjct: 294 agggtgaaacaccttc-gtcctaaatgcaacctttggtggtttgaatggatagtccggag 236 Query: 481 gaaagtgaatagtaac 496 | |||||||| ||||| Sbjct: 235 ggaagtgaatggtaac 220
>gb|DQ027022.1| Arabidopsis thaliana ubiquitinating enzyme (At5g41700) mRNA, complete cds Length = 447 Score = 87.7 bits (44), Expect = 4e-14 Identities = 115/136 (84%), Gaps = 2/136 (1%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| | || ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 287 gcagggctccatt-gttctttcaaaatgtcaaggcaaatgcttccgttgctgttgatatt 229 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||||| || ||||| || ||||||||||||| ||||| |||||||| |||||||| | Sbjct: 228 agggtgaaacaccttc-gtcctaaatgcaacctttggtggtttgaatggatagtccggag 170 Query: 481 gaaagtgaatagtaac 496 | |||||||| ||||| Sbjct: 169 ggaagtgaatggtaac 154
>emb|Z14992.1|ATUBC11 A.thaliana UBC11 mRNA for ubiquitin conjugating enzyme homolog Length = 543 Score = 85.7 bits (43), Expect = 1e-13 Identities = 162/199 (81%), Gaps = 2/199 (1%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| |||| ||||| |||||||| || || ||||||||||| ||||| || Sbjct: 197 gcagggctccatt-gctctttcaaaatatcaaggcaaatacttccattgctattgatgtt 139 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||| ||| | ||||| || ||||| | ||||| ||||||||||| || || ||||| | Sbjct: 138 tggatggtacacctta-gtcttaaaagacacctttggtggcttgaaaggataatccggag 80 Query: 481 gaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatga 540 | || ||||||| ||||||||| || || || ||||| || ||||||| || ||||||| Sbjct: 79 ggaaatgaatagaaaccaaaaacactcctccggcatacggactttcaggaggtcccatga 20 Query: 541 tcgtcgcttgccagtggaa 559 | || |||||||| ||||| Sbjct: 19 tagtggcttgccaatggaa 1
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 450 accttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacca 509 ||||||||||| ||||| || || || || || ||||| || ||||| | || || ||| Sbjct: 26775659 accttgggtggtttgaagggataatcaggagggaagtggatggtaactaggaaaactcca 26775718 Query: 510 ccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatcttc 568 |||||||||||||| |||||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 26775719 ccagcatatgggctatcagatggacccattatcgttgcctgccagtggaacatgtcttc 26775777 Score = 79.8 bits (40), Expect = 9e-12 Identities = 106/128 (82%) Strand = Plus / Minus Query: 204 cccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctc 263 ||||| || ||||||||||||||||| | ||||| | ||||||||| | |||||| || Sbjct: 34912664 cccatggcatacttctgggtccagctgcgggctgtcgtctcatactttggacggtccgtc 34912605 Query: 264 ttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagtaga 323 ||||||||||| |||||||| ||||| | |||||||| ||||| ||||| || || || Sbjct: 34912604 ttgtacatgtgggcaatctcagggacaagagggtcgtccgggttggggtcagtgagcagc 34912545 Query: 324 gagcagat 331 |||||||| Sbjct: 34912544 gagcagat 34912537 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 204 cccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctc 263 ||||| || ||||||||||||||||| | ||||| | ||||||||| | ||| || || Sbjct: 34934847 cccatggcatacttctgggtccagctgcgggctgtcgtctcatactttggacgatccgtc 34934788 Query: 264 ttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagtaga 323 ||||||||||| |||||||| ||||| | |||||||| ||||| ||||| || || || Sbjct: 34934787 ttgtacatgtgggcaatctcagggacaagagggtcgtccgggttggggtcagtgagcagc 34934728 Query: 324 gagcagat 331 |||||||| Sbjct: 34934727 gagcagat 34934720 Score = 65.9 bits (33), Expect = 1e-07 Identities = 82/97 (84%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 340 agcacctttgatactgtcaatgcagggctccatttgctccttcaagatatcaagacagat 399 |||||||| || | |||||| ||||||||||||| ||||||| | || ||||| || || Sbjct: 34933626 agcaccttagaaattgtcaaagcagggctccatt-gctccttaagaatgtcaaggcatat 34933568 Query: 400 gcttccattgctgttgatatttgggtggaaaaccttt 436 |||||||||||| ||||| ||||| ||||| |||||| Sbjct: 34933567 gcttccattgctattgatgtttggatggaagaccttt 34933531 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 449 aaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacc 508 |||||| || |||||||| |||||||||||||| || |||||| | || || || || || Sbjct: 34933043 aacctttggaggcttgaaggggtagtccggggggaaatgaatattcactaagaaaactcc 34932984 Query: 509 accagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatc 565 ||||||||| || || || | |||||||| || ||||| ||||| ||||||||||| Sbjct: 34932983 accagcatagggactatctggaggacccataatggtcgcctgccaatggaacatatc 34932927 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 449 aaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacc 508 |||||| || || ||||| |||||||||||||| || |||||| | ||||| || ||||| Sbjct: 34911741 aacctttggaggtttgaaggggtagtccggggggaaatgaatattcaccaagaaaacacc 34911682 Query: 509 accagcata 517 ||||||||| Sbjct: 34911681 accagcata 34911673 Score = 50.1 bits (25), Expect = 0.008 Identities = 80/97 (82%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 340 agcacctttgatactgtcaatgcagggctccatttgctccttcaagatatcaagacagat 399 |||||||| |||| |||||| ||||||||||| | | ||||| | || || || || || Sbjct: 34912134 agcaccttagatattgtcaaagcagggctccact-gttccttaagaatgtcgaggcatat 34912076 Query: 400 gcttccattgctgttgatatttgggtggaaaaccttt 436 |||||||||||| ||||| ||||| ||||| |||||| Sbjct: 34912075 gcttccattgctattgatgtttggatggaagaccttt 34912039 Score = 48.1 bits (24), Expect = 0.033 Identities = 61/72 (84%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 364 gggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatttgg 423 |||||||||| | ||||| | ||| ||||| || ||||| || ||||||||||| ||||| Sbjct: 26774848 gggctccattgg-tccttaaggatgtcaaggcaaatgctcccgttgctgttgatgtttgg 26774906 Query: 424 gtggaaaacctt 435 ||||||||||| Sbjct: 26774907 atggaaaacctt 26774918
>emb|BX833149.1|CNS09Z3U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL36ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 707 Score = 85.7 bits (43), Expect = 1e-13 Identities = 241/303 (79%), Gaps = 3/303 (0%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||| |||||||| || || || ||||| || ||||| |||||||| ||||| || | Sbjct: 453 tcttgtagatgtgcgctatttcaggaaccaaaggatcgtcagggtttggatccgtcagca 394 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 ||||| || || || || ||||| ||||| || | |||||||||||| | |||| || Sbjct: 393 atgagcatatg-gacagaagaaccttggatacggtaagtgcagggctccact-gctcttt 336 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttt 441 || || ||||||||||| |||||||| |||||||| |||||||| ||||||| || Sbjct: 335 cagaatgtcaagacagatacttccattactgttgatgtttgggtgataaaccttg-gtcc 277 Query: 442 taaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaa 501 || |||||||| ||||||||||| ||||| || || || |||| ||| ||||| | || Sbjct: 276 ggaaggcaacctttggtggcttgaaagggtaatctggtgggaagttaatggtaacaagaa 217 Query: 502 atacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaaca 561 | ||||| || ||| | ||||| || | |||||||||||| || |||||||| ||||||| Sbjct: 216 acacacctccggcaaacgggctatctgctggacccatgatagttgcttgccattggaaca 157 Query: 562 tat 564 ||| Sbjct: 156 tat 154
>dbj|AP003291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684E06 Length = 147004 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 450 accttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacca 509 ||||||||||| ||||| || || || || || ||||| || ||||| | || || ||| Sbjct: 11308 accttgggtggtttgaagggataatcaggagggaagtggatggtaactaggaaaactcca 11367 Query: 510 ccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatcttc 568 |||||||||||||| |||||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 11368 ccagcatatgggctatcagatggacccattatcgttgcctgccagtggaacatgtcttc 11426 Score = 48.1 bits (24), Expect = 0.033 Identities = 61/72 (84%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 364 gggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatttgg 423 |||||||||| | ||||| | ||| ||||| || ||||| || ||||||||||| ||||| Sbjct: 10497 gggctccattgg-tccttaaggatgtcaaggcaaatgctcccgttgctgttgatgtttgg 10555 Query: 424 gtggaaaacctt 435 ||||||||||| Sbjct: 10556 atggaaaacctt 10567
>dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0694A04 Length = 141476 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 450 accttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacca 509 ||||||||||| ||||| || || || || || ||||| || ||||| | || || ||| Sbjct: 122751 accttgggtggtttgaagggataatcaggagggaagtggatggtaactaggaaaactcca 122810 Query: 510 ccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatcttc 568 |||||||||||||| |||||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 122811 ccagcatatgggctatcagatggacccattatcgttgcctgccagtggaacatgtcttc 122869 Score = 48.1 bits (24), Expect = 0.033 Identities = 61/72 (84%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 364 gggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatttgg 423 |||||||||| | ||||| | ||| ||||| || ||||| || ||||||||||| ||||| Sbjct: 121940 gggctccattgg-tccttaaggatgtcaaggcaaatgctcccgttgctgttgatgtttgg 121998 Query: 424 gtggaaaacctt 435 ||||||||||| Sbjct: 121999 atggaaaacctt 122010
>gb|DQ294262.1| Solanum tuberosum clone 130D10 ubiquitin-conjugating enzyme E2-like protein mRNA, complete cds Length = 806 Score = 85.7 bits (43), Expect = 1e-13 Identities = 151/186 (81%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 401 cttccattgctgttgatatttgggtggaaaaccttttgttttaaatgcaaccttgggtgg 460 ||||||||||| ||||| || |||||||||||| || ||| ||||||||||||| || || Sbjct: 327 cttccattgctattgatgttagggtggaaaacc-ttagttctaaatgcaacctttggagg 269 Query: 461 cttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacaccaccagcatatgg 520 |||||| || || || || || || || || | |||||||||||||| || ||||| || Sbjct: 268 cttgaaaggataatcaggagggaaatggattgagaccaaaaatacacctcctgcataagg 209 Query: 521 gctttcagatggacccatgatcgtcgcttgccagtggaacatatcttctgccacangacc 580 ||| || | || |||||||| || |||||||| ||||||||||| || ||||| |||| Sbjct: 208 gctatctgtaggccccatgattgttgcttgccaatggaacatatcctcagccactggacc 149 Query: 581 ggcgct 586 ||||| Sbjct: 148 agcgct 143
>gb|L00641.1|ATHUBCD Arabidopsis thaliana ubiquitin conjugating enzyme mRNA, 3' end Length = 543 Score = 85.7 bits (43), Expect = 1e-13 Identities = 162/199 (81%), Gaps = 2/199 (1%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| |||| ||||| |||||||| || || ||||||||||| ||||| || Sbjct: 197 gcagggctccatt-gctctttcaaaatatcaaggcaaatacttccattgctattgatgtt 139 Query: 421 tgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggg 480 ||| ||| | ||||| || ||||| | ||||| ||||||||||| || || ||||| | Sbjct: 138 tggatggtacacctta-gtcttaaaagacacctttggtggcttgaaaggataatccggag 80 Query: 481 gaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatga 540 | || ||||||| ||||||||| || || || ||||| || ||||||| || ||||||| Sbjct: 79 ggaaatgaatagaaaccaaaaacactcctccggcatacggactttcaggaggtcccatga 20 Query: 541 tcgtcgcttgccagtggaa 559 | || |||||||| ||||| Sbjct: 19 tagtggcttgccaatggaa 1
>emb|BX815644.1|CNS0ABEX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS7ZD08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1496 Score = 81.8 bits (41), Expect = 2e-12 Identities = 153/189 (80%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 380 ttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgt 439 ||||| || ||||| || ||||||||||||||||||| ||| |||||||| | ||||||| Sbjct: 1173 ttcaaaatgtcaaggcaaatgcttccattgctgttgacattagggtggaaca-cttttgt 1115 Query: 440 tttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaa 499 | ||||||||||| ||||| |||| || || ||||| || |||||||| || || | Sbjct: 1114 cctgaatgcaacctttggtggtttgagaggataatccggagggaagtgaatggttacgag 1055 Query: 500 aaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaa 559 ||| ||||| || | ||| || || |||||||||||||| || || |||||||| || || Sbjct: 1054 aaagacaccgcctgaataaggactatcagatggacccattattgtagcttgccaatgaaa 995 Query: 560 catatcttc 568 ||| ||||| Sbjct: 994 catgtcttc 986 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 216 ttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctcttgtacatgtgc 275 ||||| |||||||| ||||| || ||||||||||| || | ||| | ||||||||||| Sbjct: 1335 ttctgagtccagcttctcgcagtagactcatactttgctctatcggttttgtacatgtga 1276 Query: 276 gcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 |||||||| || ||||| || || || |||||||||||||||| Sbjct: 1275 gcaatctctggaaccaatggatcatctgggtttgggtccgtta 1233
>emb|AJ867286.1| Oryza sativa (indica cultivar-group) mRNA for ubiquitin conjugating enzyme E2 (ubc4 gene) Length = 444 Score = 81.8 bits (41), Expect = 2e-12 Identities = 166/205 (80%), Gaps = 2/205 (0%) Strand = Plus / Minus Query: 364 gggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatttgg 423 |||||||||| | ||||| | ||| ||||| || ||||| || ||||||||||| ||||| Sbjct: 284 gggctccattgg-tccttaaggatgtcaaggcaaatgctcccgttgctgttgatgtttgg 226 Query: 424 gtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaa 483 ||||||||||| || ||| || ||||||||||| ||||| || || || || || | Sbjct: 225 atggaaaaccttg-gtgcgaaacgccaccttgggtggtttgaagggataatcaggaggga 167 Query: 484 agtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcg 543 |||| || ||||| | || || |||||| ||||||||| |||||||||||||| |||| Sbjct: 166 agtggatggtaactaggaaaactccaccacgatatgggctatcagatggacccattatcg 107 Query: 544 tcgcttgccagtggaacatatcttc 568 | || |||||||||||||| ||||| Sbjct: 106 ttgcctgccagtggaacatgtcttc 82
>gb|AY952317.1| Triticum aestivum cultivar 7269-10 immature spike ubiquitin-conjugating enzyme 2 mRNA, complete cds Length = 853 Score = 79.8 bits (40), Expect = 9e-12 Identities = 105/124 (84%), Gaps = 2/124 (1%) Strand = Plus / Minus Query: 355 gtcaatgcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgtt 414 ||||| ||||||||||| | ||||||| | |||||||| || ||||||||||||||||| Sbjct: 433 gtcaaagcagggctccact-gctccttaagaatatcaaggcatatgcttccattgctgtt 375 Query: 415 gatatttgggtggaaaaccttttgttttaaatgcaaccttgggtggcttgaatgggtagt 474 |||||| || ||||| ||| ||||| ||||| | ||||| ||||||||||| ||||| | Sbjct: 374 gatattaggatggaagacc-tttgtcttaaaagatacctttggtggcttgaaggggtaat 316 Query: 475 ccgg 478 |||| Sbjct: 315 ccgg 312 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 204 cccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctc 263 ||||| ||||||||||| |||||||| | ||||| | ||||||||| | ||||| || Sbjct: 583 cccatggcgtacttctgcgtccagctgcgggctgtcgtctcatactttgaccggtccgtc 524 Query: 264 ttgtacatgtgcgcaatctc 283 ||||||||||| |||||||| Sbjct: 523 ttgtacatgtgggcaatctc 504
>dbj|AP003446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1529_G03 Length = 100635 Score = 79.8 bits (40), Expect = 9e-12 Identities = 106/128 (82%) Strand = Plus / Minus Query: 204 cccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctc 263 ||||| || ||||||||||||||||| | ||||| | ||||||||| | |||||| || Sbjct: 42028 cccatggcatacttctgggtccagctgcgggctgtcgtctcatactttggacggtccgtc 41969 Query: 264 ttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagtaga 323 ||||||||||| |||||||| ||||| | |||||||| ||||| ||||| || || || Sbjct: 41968 ttgtacatgtgggcaatctcagggacaagagggtcgtccgggttggggtcagtgagcagc 41909 Query: 324 gagcagat 331 |||||||| Sbjct: 41908 gagcagat 41901 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 204 cccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctc 263 ||||| || ||||||||||||||||| | ||||| | ||||||||| | ||| || || Sbjct: 64211 cccatggcatacttctgggtccagctgcgggctgtcgtctcatactttggacgatccgtc 64152 Query: 264 ttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagtaga 323 ||||||||||| |||||||| ||||| | |||||||| ||||| ||||| || || || Sbjct: 64151 ttgtacatgtgggcaatctcagggacaagagggtcgtccgggttggggtcagtgagcagc 64092 Query: 324 gagcagat 331 |||||||| Sbjct: 64091 gagcagat 64084 Score = 65.9 bits (33), Expect = 1e-07 Identities = 82/97 (84%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 340 agcacctttgatactgtcaatgcagggctccatttgctccttcaagatatcaagacagat 399 |||||||| || | |||||| ||||||||||||| ||||||| | || ||||| || || Sbjct: 62990 agcaccttagaaattgtcaaagcagggctccatt-gctccttaagaatgtcaaggcatat 62932 Query: 400 gcttccattgctgttgatatttgggtggaaaaccttt 436 |||||||||||| ||||| ||||| ||||| |||||| Sbjct: 62931 gcttccattgctattgatgtttggatggaagaccttt 62895 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 449 aaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacc 508 |||||| || |||||||| |||||||||||||| || |||||| | || || || || || Sbjct: 62407 aacctttggaggcttgaaggggtagtccggggggaaatgaatattcactaagaaaactcc 62348 Query: 509 accagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatc 565 ||||||||| || || || | |||||||| || ||||| ||||| ||||||||||| Sbjct: 62347 accagcatagggactatctggaggacccataatggtcgcctgccaatggaacatatc 62291 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 449 aaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacc 508 |||||| || || ||||| |||||||||||||| || |||||| | ||||| || ||||| Sbjct: 41105 aacctttggaggtttgaaggggtagtccggggggaaatgaatattcaccaagaaaacacc 41046 Query: 509 accagcata 517 ||||||||| Sbjct: 41045 accagcata 41037 Score = 50.1 bits (25), Expect = 0.008 Identities = 80/97 (82%), Gaps = 1/97 (1%) Strand = Plus / Minus Query: 340 agcacctttgatactgtcaatgcagggctccatttgctccttcaagatatcaagacagat 399 |||||||| |||| |||||| ||||||||||| | | ||||| | || || || || || Sbjct: 41498 agcaccttagatattgtcaaagcagggctccact-gttccttaagaatgtcgaggcatat 41440 Query: 400 gcttccattgctgttgatatttgggtggaaaaccttt 436 |||||||||||| ||||| ||||| ||||| |||||| Sbjct: 41439 gcttccattgctattgatgtttggatggaagaccttt 41403
>ref|NM_179131.1| Arabidopsis thaliana UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT4G27960 (UBC9) transcript variant AT4G27960.1 mRNA, complete cds Length = 686 Score = 75.8 bits (38), Expect = 1e-10 Identities = 142/174 (81%), Gaps = 2/174 (1%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||||||||| || ||||| |||||||| || || || |||||||| ||||||| | Sbjct: 464 tcttgtacatgtgagctatctcagggaccaaaggatcatctgggtttggatccgttaaca 405 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 ||| ||||| || || |||||||| || | ||| | ||||| ||||| | ||||||| Sbjct: 404 aagaacagatc-gatagcagcaccttggaaattgtgagagcaggactccact-gctcctt 347 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacctt 435 |||||| || || |||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 346 caagatgtcgaggcagatgcttccattgctgttaatgtttggatggaacacctt 293
>ref|NM_118934.1| Arabidopsis thaliana UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT4G27960 (UBC9) transcript variant AT4G27960.2 mRNA, complete cds Length = 896 Score = 75.8 bits (38), Expect = 1e-10 Identities = 142/174 (81%), Gaps = 2/174 (1%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||||||||| || ||||| |||||||| || || || |||||||| ||||||| | Sbjct: 602 tcttgtacatgtgagctatctcagggaccaaaggatcatctgggtttggatccgttaaca 543 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 ||| ||||| || || |||||||| || | ||| | ||||| ||||| | ||||||| Sbjct: 542 aagaacagatc-gatagcagcaccttggaaattgtgagagcaggactccact-gctcctt 485 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacctt 435 |||||| || || |||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 484 caagatgtcgaggcagatgcttccattgctgttaatgtttggatggaacacctt 431
>ref|XM_474269.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 75.8 bits (38), Expect = 1e-10 Identities = 142/174 (81%), Gaps = 2/174 (1%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||||||||| ||||||||||| |||||||| || |||||||| |||||||| || | Sbjct: 385 tcttgtacatgtgagcaatctccggcaccaacggatcatcggggttcgggtccgtcagca 326 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 | || || | |||| ||||| |||||||||| || | |||||| ||||| || ||||| Sbjct: 325 gtgaaca-aattgacaggaggacctttgatatggtaagtgcaggactcca-ctgttcctt 268 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacctt 435 | ||| || || || ||||| |||||||| || || || |||||||||||||| Sbjct: 267 gaggatgtcgaggcaaatgctgccattgctattaatgttcgggtggaaaacctt 214
>gb|AY142644.1| Arabidopsis thaliana E2 ubiquitin-conjugating enzyme 9 (UBC9) (At4g27960) mRNA, complete cds Length = 478 Score = 75.8 bits (38), Expect = 1e-10 Identities = 142/174 (81%), Gaps = 2/174 (1%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||||||||| || ||||| |||||||| || || || |||||||| ||||||| | Sbjct: 385 tcttgtacatgtgagctatctcagggaccaaaggatcatctgggtttggatccgttaaca 326 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 ||| ||||| || || |||||||| || | ||| | ||||| ||||| | ||||||| Sbjct: 325 aagaacagatc-gatagcagcaccttggaaattgtgagagcaggactccact-gctcctt 268 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacctt 435 |||||| || || |||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 267 caagatgtcgaggcagatgcttccattgctgttaatgtttggatggaacacctt 214
>emb|Z14990.1|ATUBC9 A.thaliana UBC9 mRNA for ubiquitin conjugating enzyme homolog Length = 687 Score = 75.8 bits (38), Expect = 1e-10 Identities = 142/174 (81%), Gaps = 2/174 (1%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||||||||| || ||||| |||||||| || || || |||||||| ||||||| | Sbjct: 435 tcttgtacatgtgagctatctcagggaccaaaggatcatctgggtttggatccgttaaca 376 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 ||| ||||| || || |||||||| || | ||| | ||||| ||||| | ||||||| Sbjct: 375 aagaacagatc-gatagcagcaccttggaaattgtgagagcaggactccact-gctcctt 318 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacctt 435 |||||| || || |||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 317 caagatgtcgaggcagatgcttccattgctgttaatgtttggatggaacacctt 264
>gb|AY080741.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC9 (At4g27960) mRNA, complete cds Length = 688 Score = 75.8 bits (38), Expect = 1e-10 Identities = 142/174 (81%), Gaps = 2/174 (1%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||||||||| || ||||| |||||||| || || || |||||||| ||||||| | Sbjct: 461 tcttgtacatgtgagctatctcagggaccaaaggatcatctgggtttggatccgttaaca 402 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 ||| ||||| || || |||||||| || | ||| | ||||| ||||| | ||||||| Sbjct: 401 aagaacagatc-gatagcagcaccttggaaattgtgagagcaggactccact-gctcctt 344 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacctt 435 |||||| || || |||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 343 caagatgtcgaggcagatgcttccattgctgttaatgtttggatggaacacctt 290
>emb|X72626.1|ATUCEE2B A.thaliana UbcAT4b mRNA for ubiquitin conjugating enzyme E2 Length = 643 Score = 75.8 bits (38), Expect = 1e-10 Identities = 142/174 (81%), Gaps = 2/174 (1%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||||||||| || ||||| |||||||| || || || |||||||| ||||||| | Sbjct: 419 tcttgtacatgtgagctatctcagggaccaaaggatcatctgggtttggatccgttaaca 360 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 ||| ||||| || || |||||||| || | ||| | ||||| ||||| | ||||||| Sbjct: 359 aagaacagatc-gatagcagcaccttggaaattgtgagagcaggactccact-gctcctt 302 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacctt 435 |||||| || || |||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 301 caagatgtcgaggcagatgcttccattgctgttaatgtttggatggaacacctt 248
>gb|AF325019.2|AF325019 Arabidopsis thaliana AT4g27960 (AT4g27960/T13J8_70) mRNA, complete cds Length = 896 Score = 75.8 bits (38), Expect = 1e-10 Identities = 142/174 (81%), Gaps = 2/174 (1%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||||||||| || ||||| |||||||| || || || |||||||| ||||||| | Sbjct: 602 tcttgtacatgtgagctatctcagggaccaaaggatcatctgggtttggatccgttaaca 543 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 ||| ||||| || || |||||||| || | ||| | ||||| ||||| | ||||||| Sbjct: 542 aagaacagatc-gatagcagcaccttggaaattgtgagagcaggactccact-gctcctt 485 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacctt 435 |||||| || || |||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 484 caagatgtcgaggcagatgcttccattgctgttaatgtttggatggaacacctt 431
>dbj|AK119682.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-A01, full insert sequence Length = 832 Score = 75.8 bits (38), Expect = 1e-10 Identities = 142/174 (81%), Gaps = 2/174 (1%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||||||||| ||||||||||| |||||||| || |||||||| |||||||| || | Sbjct: 540 tcttgtacatgtgagcaatctccggcaccaacggatcatcggggttcgggtccgtcagca 481 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 | || || | |||| ||||| |||||||||| || | |||||| ||||| || ||||| Sbjct: 480 gtgaaca-aattgacaggaggacctttgatatggtaagtgcaggactcca-ctgttcctt 423 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacctt 435 | ||| || || || ||||| |||||||| || || || |||||||||||||| Sbjct: 422 gaggatgtcgaggcaaatgctgccattgctattaatgttcgggtggaaaacctt 369
>gb|DQ027023.1| Arabidopsis thaliana ubiquitinating enzyme (At4g27960) mRNA, complete cds Length = 537 Score = 75.8 bits (38), Expect = 1e-10 Identities = 142/174 (81%), Gaps = 2/174 (1%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||||||||| || ||||| |||||||| || || || |||||||| ||||||| | Sbjct: 475 tcttgtacatgtgagctatctcagggaccaaaggatcatctgggtttggatccgttaaca 416 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 ||| ||||| || || |||||||| || | ||| | ||||| ||||| | ||||||| Sbjct: 415 aagaacagatc-gatagcagcaccttggaaattgtgagagcaggactccact-gctcctt 358 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacctt 435 |||||| || || |||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 357 caagatgtcgaggcagatgcttccattgctgttaatgtttggatggaacacctt 304
>gb|L00639.1|ATHUBCB Arabidopsis thaliana ubiquitin conjugating enzyme mRNA, complete cds Length = 658 Score = 75.8 bits (38), Expect = 1e-10 Identities = 142/174 (81%), Gaps = 2/174 (1%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||||||||| || ||||| |||||||| || || || |||||||| ||||||| | Sbjct: 435 tcttgtacatgtgagctatctcagggaccaaaggatcatctgggtttggatccgttaaca 376 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 ||| ||||| || || |||||||| || | ||| | ||||| ||||| | ||||||| Sbjct: 375 aagaacagatc-gatagcagcaccttggaaattgtgagagcaggactccact-gctcctt 318 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacctt 435 |||||| || || |||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 317 caagatgtcgaggcagatgcttccattgctgttaatgtttggatggaacacctt 264
>ref|XM_786369.1| PREDICTED: Strongylocentrotus purpuratus similar to Ubiquitin-conjugating enzyme E2-17 kDa (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (Effete protein) (LOC586593), mRNA Length = 444 Score = 73.8 bits (37), Expect = 6e-10 Identities = 146/181 (80%), Gaps = 1/181 (0%) Strand = Plus / Minus Query: 385 gatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaa 444 |||||| ||||||||||| ||||||||||| |||||||| ||| | | ||||||| | | Sbjct: 264 gatatctagacagatgctgccattgctgtttatatttggatggtaga-tttttgttgtga 206 Query: 445 atgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaata 504 | ||||||||||| || ||||| ||||| || | ||||||||||| | || ||||| | Sbjct: 205 aagcaaccttgggaggtttgaaggggtaatctgtaggaaagtgaattgaaaggaaaaaca 146 Query: 505 caccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatat 564 | |||| |||||| || |||| ||||||||| || || |||||||||||| |||||| Sbjct: 145 cgccactctgatatggactgtcaggtggacccattattgttgcttgccagtggtacatat 86 Query: 565 c 565 | Sbjct: 85 c 85
>dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDA7 Length = 82033 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 450 accttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacca 509 ||||| ||||||||||| ||||| || || || |||||||| ||||| | ||| ||||| Sbjct: 64446 acctttggtggcttgaaagggtaatctggtgggaagtgaatggtaacaagaaacacacct 64387 Query: 510 ccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatc 565 || ||| | ||||| || | |||||||||||| || |||||||| ||||||||||| Sbjct: 64386 ccggcaaacgggctatctgctggacccatgatagttgcttgccattggaacatatc 64331 Score = 60.0 bits (30), Expect = 9e-06 Identities = 79/94 (84%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 342 cacctttgatactgtcaatgcagggctccatttgctccttcaagatatcaagacagatgc 401 |||||| ||||| || | |||||||||||| | |||| |||| || ||||||||||| | Sbjct: 64691 caccttggatacggtaagtgcagggctccact-gctctttcagaatgtcaagacagatac 64633 Query: 402 ttccattgctgttgatatttgggtggaaaacctt 435 ||||||| |||||||| |||||||| ||||||| Sbjct: 64632 ttccattactgttgatgtttgggtgataaacctt 64599 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Minus Query: 234 gctgtggactcatacttcgcacggtcgctcttgtacatgtgcgcaatctccgggaccaac 293 ||||||||||| ||||| | ||||| ||||||| |||||||| || || || ||||| Sbjct: 65250 gctgtggactcgtacttgactcggtctgtcttgtagatgtgcgctatttcaggaaccaaa 65191 Query: 294 gggtcgtcggggtttgggtccgt 316 || ||||| |||||||| ||||| Sbjct: 65190 ggatcgtcagggtttggatccgt 65168
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgt 316 ||||||||||||| ||||||||||| |||||||| || |||||||| |||||||| Sbjct: 33649 tcttgtacatgtgagcaatctccggcaccaacggatcatcggggttcgggtccgt 33703
>gb|AF480945.1| Arabidopsis thaliana ubiquitin conjugating enzyme UBC9A (UBC9A) mRNA, complete cds Length = 723 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 216 ttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctcttgtacatgtgc 275 ||||| |||||||| ||||| || ||||||||||| || | ||| | ||||||||||| Sbjct: 518 ttctgagtccagcttctcgcagtagactcatactttgctctatcggttttgtacatgtga 459 Query: 276 gcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 |||||||| || ||||| || || || |||||||||||||||| Sbjct: 458 gcaatctctggaaccaatggatcatctgggtttgggtccgtta 416 Score = 65.9 bits (33), Expect = 1e-07 Identities = 151/189 (79%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 380 ttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgt 439 ||||| || ||||| || ||||||||||||||||||| ||| |||||||| | ||||||| Sbjct: 356 ttcaaaatgtcaaggcaaatgcttccattgctgttgacattagggtggaaca-cttttgt 298 Query: 440 tttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaa 499 | ||||||||||| ||||| ||||| || || ||||| || ||||| || || || | Sbjct: 297 cctgaatgcaacctttggtggtttgaaaggataatccggagggaagtggatggttacgag 238 Query: 500 aaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaa 559 ||| || || || | ||| || || || ||||||||||| || || |||||||| || || Sbjct: 237 aaagactccgcctgaataaggactatcggatggacccattattgtagcttgccaatgaaa 178 Query: 560 catatcttc 568 ||| ||||| Sbjct: 177 catgtcttc 169
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgt 316 ||||||||||||| ||||||||||| |||||||| || |||||||| |||||||| Sbjct: 34122267 tcttgtacatgtgagcaatctccggcaccaacggatcatcggggttcgggtccgt 34122321
>emb|BX816916.1|CNS0ABT7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH76ZE04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 467 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 216 ttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctcttgtacatgtgc 275 ||||| |||||||| ||||| || ||||||||||| || | ||| | ||||||||||| Sbjct: 265 ttctgagtccagcttctcgcagtagactcatactttgctctatcggttttgtacatgtga 206 Query: 276 gcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 |||||||| || ||||| || || || |||||||||||||||| Sbjct: 205 gcaatctctggaaccaatggatcatctgggtttgggtccgtta 163 Score = 61.9 bits (31), Expect = 2e-06 Identities = 74/87 (85%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 380 ttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgt 439 ||||| || ||||| || ||||||||||||||||||| ||| |||||||| | ||||||| Sbjct: 103 ttcaaaatgtcaaggcaaatgcttccattgctgttgacattagggtggaaca-cttttgt 45 Query: 440 tttaaatgcaaccttgggtggcttgaa 466 | ||||||||||| ||||| ||||| Sbjct: 44 cctgaatgcaacctttggtggtttgaa 18
>gb|AC007764.2|AC007764 Genomic sequence for Arabidopsis thaliana BAC F22C12 from chromosome I, complete sequence Length = 111222 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 216 ttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctcttgtacatgtgc 275 ||||| |||||||| ||||| || ||||||||||| || | ||| | ||||||||||| Sbjct: 15690 ttctgagtccagcttctcgcagtagactcatactttgctctatcggttttgtacatgtga 15749 Query: 276 gcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 |||||||| || ||||| || || || |||||||||||||||| Sbjct: 15750 gcaatctctggaaccaatggatcatctgggtttgggtccgtta 15792 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 380 ttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaa 429 ||||| || ||||| || ||||||||||||||||||| ||| |||||||| Sbjct: 15938 ttcaaaatgtcaaggcaaatgcttccattgctgttgacattagggtggaa 15987 Score = 46.1 bits (23), Expect = 0.13 Identities = 95/119 (79%) Strand = Plus / Plus Query: 450 accttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacca 509 ||||| ||||| ||||| || || ||||| || |||||||| || || | ||| ||||| Sbjct: 16073 acctttggtggtttgaaaggataatccggagggaagtgaatggttacgagaaagacaccg 16132 Query: 510 ccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatcttc 568 || | ||| || || |||||||||||||| || || |||||||| || ||||| ||||| Sbjct: 16133 cctgaataaggactatcagatggacccattattgtagcttgccaatgaaacatgtcttc 16191
>dbj|AK104783.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D03, full insert sequence Length = 1071 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgt 316 ||||||||||||| ||||||||||| |||||||| || |||||||| |||||||| Sbjct: 779 tcttgtacatgtgagcaatctccggcaccaacggatcatcggggttcgggtccgt 725
>dbj|AK060954.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-G05, full insert sequence Length = 1071 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgt 316 ||||||||||||| ||||||||||| |||||||| || |||||||| |||||||| Sbjct: 779 tcttgtacatgtgagcaatctccggcaccaacggatcatcggggttcgggtccgt 725
>gb|AY105836.1| Zea mays PCO130472 mRNA sequence Length = 915 Score = 69.9 bits (35), Expect = 9e-09 Identities = 133/163 (81%), Gaps = 2/163 (1%) Strand = Plus / Minus Query: 264 ttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagtaga 323 ||||||||||| || ||||| ||||| | |||||||| ||||| ||||| || || || Sbjct: 595 ttgtacatgtgggcgatctcagggacaagggggtcgtccgggttggggtcggtgaggagc 536 Query: 324 gagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctccttca 383 |||| ||| || ||||| |||||||||| |||| |||||||||||| ||||||||| | Sbjct: 535 gagctgatg-gagaggaggacctttgatatggtcagtgcagggctcca-ttgctccttga 478 Query: 384 agatatcaagacagatgcttccattgctgttgatatttgggtg 426 ||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 477 ggatatcaaggcaaatgctcccattagagttgatgtttgggtg 435 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 200 tcagcccatcgcgtacttctgggtccag 227 ||||||||| |||||||||||||||||| Sbjct: 659 tcagcccattgcgtacttctgggtccag 632
>emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0811B10, complete sequence Length = 99356 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgt 316 ||||||||||||| ||||||||||| |||||||| || |||||||| |||||||| Sbjct: 39357 tcttgtacatgtgagcaatctccggcaccaacggatcatcggggttcgggtccgt 39411
>emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 68 Length = 199749 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 374 tgctccttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacc 433 |||||||||||||| || || |||||||||||||||||||| || ||||| ||||| ||| Sbjct: 31813 tgctccttcaagatgtcgaggcagatgcttccattgctgttaatgtttggatggaacacc 31872 Query: 434 tt 435 || Sbjct: 31873 tt 31874 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 ||||||||||||| || ||||| |||||||| || || || |||||||| ||||||| Sbjct: 31610 tcttgtacatgtgagctatctcagggaccaaaggatcatctgggtttggatccgtta 31666
>emb|AL035524.1|ATT13J8 Arabidopsis thaliana DNA chromosome 4, BAC clone T13J8 (ESSAII project) Length = 83693 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 374 tgctccttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacc 433 |||||||||||||| || || |||||||||||||||||||| || ||||| ||||| ||| Sbjct: 26677 tgctccttcaagatgtcgaggcagatgcttccattgctgttaatgtttggatggaacacc 26736 Query: 434 tt 435 || Sbjct: 26737 tt 26738 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgtta 318 ||||||||||||| || ||||| |||||||| || || || |||||||| ||||||| Sbjct: 26474 tcttgtacatgtgagctatctcagggaccaaaggatcatctgggtttggatccgtta 26530
>gb|AY736121.1| Triticum aestivum ubiquitin-conjugating enzyme mRNA, complete cds Length = 460 Score = 67.9 bits (34), Expect = 4e-08 Identities = 186/234 (79%), Gaps = 2/234 (0%) Strand = Plus / Minus Query: 202 agcccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgc 261 ||||||| ||||||||||| |||||| | ||| |||||||| ||||| || || || Sbjct: 455 agcccatggcgtacttctgtgtccaggagcgcgccgtggactcgtacttggcccgatcag 396 Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagta 321 ||||||||||||| || ||||| || |||| || || |||||||| |||||||| || | Sbjct: 395 tcttgtacatgtgagcgatctcgggcaccagaggatcatcggggttcgggtccgtcagca 336 Query: 322 gagagcagatttgaaaggagcacctttgatactgtcaatgcagggctccatttgctcctt 381 || |||| |||| || || |||||||||| ||||| || |||||||| || ||||| Sbjct: 335 acgaacaga-ttgacagcaggacctttgatatggtcaaagccgggctcca-ctgttcctt 278 Query: 382 caagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacctt 435 | || ||||| || ||||| || ||||||||||| ||||||||||| ||||| Sbjct: 277 gagaatgtcaaggcaaatgctgccgttgctgttgatgtttgggtggaacacctt 224
>dbj|AK208479.1| Mus musculus cDNA, clone:Y2G0111I07, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000070851, based on BLAT search Length = 385 Score = 67.9 bits (34), Expect = 4e-08 Identities = 104/126 (82%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||||||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 281 atatcaagacagatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 223 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 222 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 163 Query: 506 accacc 511 |||||| Sbjct: 162 accacc 157
>ref|NM_201110.1| Danio rerio zgc:66323 (zgc:66323), mRNA Length = 939 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 394 acagatgcttccattgctgttgatatttgggtg 426 ||||||||||||||||||||||||||||||||| Sbjct: 313 acagatgcttccattgctgttgatatttgggtg 281
>gb|AY389716.1| Hyacinthus orientalis ubiquitin-conjugating enzyme 9 mRNA, partial cds Length = 650 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Minus Query: 204 cccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctc 263 ||||| ||||||||||||||||||||||| | ||| | |||||| || | ||| || Sbjct: 420 cccatggcgtacttctgggtccagctccttgatgtagtctcatatttgttcctgtctgtc 361 Query: 264 ttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgt 316 |||||||||||||| || || || |||||||| || || |||||||||||||| Sbjct: 360 ttgtacatgtgcgcgatttctggaaccaacggatcatctgggtttgggtccgt 308 Score = 56.0 bits (28), Expect = 1e-04 Identities = 102/124 (82%), Gaps = 2/124 (1%) Strand = Plus / Minus Query: 374 tgctccttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacc 433 ||||| ||||| ||||| || || ||||| || ||||| ||||||||||||||||| ||| Sbjct: 252 tgctctttcaaaatatccaggcaaatgctcccgttgctattgatatttgggtggaagacc 193 Query: 434 ttttgttttaaatgcaaccttgggtggcttgaatgggtagt-ccgggggaaagtgaatag 492 ||||| | ||||| ||||| ||||| || ||||| |||| |||| |||||||| || | Sbjct: 192 -tttgtcctgaatgctaccttaggtggtttaaatggatagtcccggaggaaagtggattg 134 Query: 493 taac 496 |||| Sbjct: 133 taac 130
>gb|AY702915.1|AY702915S1 Pisum sativum ubiquitin conjugating enzyme E2 mRNA, partial cds Length = 236 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 480 ggaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatg 539 ||||| ||||| ||||||||||| ||||| |||||||| || || |||| |||||||| Sbjct: 223 ggaaaatgaatggtaaccaaaaaaacacctccagcatacggactatcagccggacccata 164 Query: 540 atcgtcgcttgccagtggaacatatcttc 568 || || |||||||| |||||||| ||||| Sbjct: 163 attgttgcttgccaatggaacatgtcttc 135
>gb|BC055599.1| Danio rerio zgc:66323, mRNA (cDNA clone MGC:66323 IMAGE:5601898), complete cds Length = 939 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 394 acagatgcttccattgctgttgatatttgggtg 426 ||||||||||||||||||||||||||||||||| Sbjct: 313 acagatgcttccattgctgttgatatttgggtg 281
>gb|DQ118119.1|DQ118119S1 Lupinus albus ubiquitin conjugating enzyme E2 mRNA, partial cds Length = 178 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 480 ggaaagtgaatagtaaccaaaaatacaccaccagcatatgggctttcagatggacccatg 539 ||||| ||||| ||||||| ||||||||| ||||||||||| || |||| |||||||| Sbjct: 164 ggaaaatgaatggtaaccagaaatacacctccagcatatggactatcagcaggacccata 105 Query: 540 atcgtcgcttgccagtggaacatatcttc 568 || || |||||||| || ||||| ||||| Sbjct: 104 attgttgcttgccaatgaaacatgtcttc 76
>ref|XM_704049.1| PREDICTED: Danio rerio similar to ubiquitin-conjugating enzyme E2D 4 (putative), transcript variant 2 (LOC573457), mRNA Length = 545 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 394 acagatgcttccattgctgttgatatttgggtg 426 ||||||||||||||||||||||||||||||||| Sbjct: 263 acagatgcttccattgctgttgatatttgggtg 231
>ref|XM_683556.1| PREDICTED: Danio rerio similar to ubiquitin-conjugating enzyme E2D 4 (putative), transcript variant 1 (LOC573457), mRNA Length = 856 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 394 acagatgcttccattgctgttgatatttgggtg 426 ||||||||||||||||||||||||||||||||| Sbjct: 307 acagatgcttccattgctgttgatatttgggtg 275
>emb|BX324133.12| Zebrafish DNA sequence from clone CH211-209H1 in linkage group 10, complete sequence Length = 127130 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 394 acagatgcttccattgctgttgatatttgggtg 426 ||||||||||||||||||||||||||||||||| Sbjct: 73337 acagatgcttccattgctgttgatatttgggtg 73369
>gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BAC F17O14 genomic sequence, complete sequence Length = 90721 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Minus Query: 450 accttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacca 509 ||||| ||||||||||| || || ||||| || || ||||||| ||||||||| || || Sbjct: 52977 acctttggtggcttgaaaggataatccggagggaaatgaatagaaaccaaaaacactcct 52918 Query: 510 ccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacat 562 || ||||| || ||||||| || |||||||| || |||||||| |||||||| Sbjct: 52917 ccggcatacggactttcaggaggtcccatgatagtggcttgccaatggaacat 52865 Score = 54.0 bits (27), Expect = 5e-04 Identities = 55/63 (87%), Gaps = 1/63 (1%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| |||| ||||| |||||||| || || ||||||||||| ||||| || Sbjct: 53146 gcagggctccatt-gctctttcaaaatatcaaggcaaatacttccattgctattgatgtt 53088 Query: 421 tgg 423 ||| Sbjct: 53087 tgg 53085
>emb|AL929290.5| Zebrafish DNA sequence from clone CH211-67N1, complete sequence Length = 168517 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 394 acagatgcttccattgctgttgatatttgggtg 426 ||||||||||||||||||||||||||||||||| Sbjct: 109174 acagatgcttccattgctgttgatatttgggtg 109142
>dbj|AK058360.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-F04, full insert sequence Length = 355 Score = 63.9 bits (32), Expect = 5e-07 Identities = 104/128 (81%) Strand = Plus / Minus Query: 204 cccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctc 263 ||||| || |||||||||||||||| | ||||| | ||||||||| | ||| || || Sbjct: 143 cccatggcatacttctgggtccagccgcgggctgtcgtctcatactttggacgatccgtc 84 Query: 264 ttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgttagtaga 323 ||||||||||| |||||||| ||||| | |||||||| ||||| ||||| || || || Sbjct: 83 ttgtacatgtgggcaatctcagggacaagagggtcgtccgggttggggtcagtgagcagc 24 Query: 324 gagcagat 331 |||||||| Sbjct: 23 gagcagat 16
>gb|BC084849.1| Xenopus laevis hypothetical LOC495381, mRNA (cDNA clone MGC:85460 IMAGE:6937002), complete cds Length = 1557 Score = 63.9 bits (32), Expect = 5e-07 Identities = 135/168 (80%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 392 agacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaatgcaac 451 ||||| || |||||||||||||| || |||||||| | | ||||||| | |||||||| Sbjct: 446 agacaaatacttccattgctgtttatgtttgggtgatagat-ttttgttgtgaatgcaac 388 Query: 452 cttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacaccacc 511 ||| ||||| ||||| || ||||| | ||||||||||| || | ||||| ||||| || Sbjct: 387 ctttggtggtttgaaaggatagtctgttggaaagtgaattgtgaggaaaaagacaccccc 328 Query: 512 agcatatgggctttcagatggacccatgatcgtcgcttgccagtggaa 559 ||||||||| |||| ||| ||||| || || |||||||||||||| Sbjct: 327 ttgatatgggctgtcagttggtcccataatggttgcttgccagtggaa 280
>gb|AY083611.1| Oryza sativa elicitor and UV light related transcription factor (Elr) mRNA, complete cds Length = 576 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 262 tcttgtacatgtgcgcaatctccgggaccaacgggtcgtcggggtttgggtccgt 316 |||||||||||| ||||||||||| |||||||| || |||||||| |||||||| Sbjct: 508 tcttgtacatgtaagcaatctccggcaccaacggatcatcggggttcgggtccgt 454
>gb|AY082010.1| Gossypium raimondii ubiquitin-conjugating enzyme E2 gene, complete cds Length = 2013 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 385 gatatcaagacagatgcttccattgctgttgatatttgggtggaaaacctt 435 |||||||||||| ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 1199 gatatcaagacaaatgctcccattgctattgatgtttggatggaaaacctt 1149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 450 accttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacca 509 ||||| || |||||||| || || || || ||||| |||||| |||| ||||||||||| Sbjct: 1029 accttagggggcttgaaaggataatctggaggaaaatgaatactaactaaaaatacacct 970 Query: 510 ccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatcttc 568 || ||||| ||||| || || || |||||||| || |||||||| || ||||| ||||| Sbjct: 969 cccgcataagggctatcggaagggcccatgattgttgcttgccaatgaaacatgtcttc 911 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Minus Query: 204 cccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctc 263 ||||| || |||||||||||||||| | ||||| | |||||||| || || || || Sbjct: 1851 cccatagcatacttctgggtccagccacgtgctgtagcttcatactttgcccgatcagtc 1792 Query: 264 ttgtacatgtgcgcaatctccgg 286 || |||||||||||||||||||| Sbjct: 1791 ttatacatgtgcgcaatctccgg 1769
>gb|AY082009.1| Gossypium thurberi ubiquitin-conjugating enzyme E2 gene, complete cds Length = 2016 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 385 gatatcaagacagatgcttccattgctgttgatatttgggtggaaaacctt 435 |||||||||||| ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 1198 gatatcaagacaaatgctcccattgctattgatgtttggatggaaaacctt 1148 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 450 accttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacca 509 ||||| || |||||||| || || || || ||||| |||||| |||| ||||||||||| Sbjct: 1028 accttagggggcttgaaaggataatctggaggaaaatgaatactaactaaaaatacacct 969 Query: 510 ccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatcttc 568 || ||||| ||||| || || || |||||||| || |||||||| || ||||| ||||| Sbjct: 968 cccgcataagggctatcggaagggcccatgattgttgcttgccaatgaaacatgtcttc 910 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Minus Query: 204 cccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctc 263 ||||| || |||||||||||||||| | ||||| | |||||||| || || || || Sbjct: 1854 cccatggcatacttctgggtccagccacgtgctgtagcttcatactttgcccgatcagtc 1795 Query: 264 ttgtacatgtgcgcaatctccgg 286 || |||||||||||||||||||| Sbjct: 1794 ttatacatgtgcgcaatctccgg 1772
>gb|AY082008.1| Gossypium arboreum ubiquitin-conjugating enzyme E2 gene, complete cds Length = 1985 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 385 gatatcaagacagatgcttccattgctgttgatatttgggtggaaaacctt 435 |||||||||||| ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 1197 gatatcaagacaaatgctcccattgctattgatgtttggatggaaaacctt 1147 Score = 56.0 bits (28), Expect = 1e-04 Identities = 105/131 (80%) Strand = Plus / Minus Query: 450 accttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacca 509 ||||| || |||||||| || || || || ||||| |||||| |||| ||||||||||| Sbjct: 1027 accttagggggcttgaaaggataatctggaggaaaatgaatactaactaaaaatacacct 968 Query: 510 ccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatcttct 569 || ||||| ||||| || || || ||||||| || |||||||| || ||||| ||||| Sbjct: 967 cccgcataagggctatcggaagggcccatgagtgttgcttgccaatgaaacatgtcttca 908 Query: 570 gccacangacc 580 || ||| |||| Sbjct: 907 gctacaggacc 897
>gb|AY082007.1| Gossypium hirsutum ubiquitin-conjugating enzyme E2 (UBC2) gene, complete cds Length = 1953 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 385 gatatcaagacagatgcttccattgctgttgatatttgggtggaaaacctt 435 |||||||||||| ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 1198 gatatcaagacaaatgctcccattgctattgatgtttggatggaaaacctt 1148 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 450 accttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacca 509 ||||| || |||||||| || || || || ||||| |||||| |||| ||||||||||| Sbjct: 1028 accttagggggcttgaaaggataatctggaggaaaatgaatactaactaaaaatacacct 969 Query: 510 ccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatcttc 568 || ||||| ||||| || || || |||||||| || |||||||| || ||||| ||||| Sbjct: 968 cccgcataagggctatcggaagggcccatgattgttgcttgccaatgaaacatgtcttc 910 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Minus Query: 204 cccatcgcgtacttctgggtccagctcctcgctgtggactcatacttcgcacggtcgctc 263 ||||| || |||||||||||||||| | ||||| | |||||||| || || || || Sbjct: 1791 cccatggcatacttctgggtccagccacgtgctgtagcttcatactttgcccgatcagtc 1732 Query: 264 ttgtacatgtgcgcaatctcc 284 || |||||||||||||||||| Sbjct: 1731 ttatacatgtgcgcaatctcc 1711
>gb|AY082006.1| Gossypium hirsutum ubiquitin-conjugating enzyme E2 (UBC1) gene, complete cds Length = 1982 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 385 gatatcaagacagatgcttccattgctgttgatatttgggtggaaaacctt 435 |||||||||||| ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 1196 gatatcaagacaaatgctcccattgctattgatgtttggatggaaaacctt 1146 Score = 56.0 bits (28), Expect = 1e-04 Identities = 105/131 (80%) Strand = Plus / Minus Query: 450 accttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacca 509 ||||| || |||||||| || || || || ||||| |||||| |||| ||||||||||| Sbjct: 1026 accttagggggcttgaaaggataatctggaggaaaatgaatactaactaaaaatacacct 967 Query: 510 ccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatcttct 569 || ||||| ||||| || || || ||||||| || |||||||| || ||||| ||||| Sbjct: 966 cccgcataagggctatcggaagggcccatgagtgttgcttgccaatgaaacatgtcttca 907 Query: 570 gccacangacc 580 || ||| |||| Sbjct: 906 gctacaggacc 896
>ref|NM_124709.2| Arabidopsis thaliana UBC10; ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G53300 (UBC10) transcript variant AT5G53300.2 mRNA, complete cds Length = 837 Score = 60.0 bits (30), Expect = 9e-06 Identities = 168/213 (78%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 374 tgctccttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacc 433 |||||||||||||| || || || ||||| || |||||||| || || || ||||| ||| Sbjct: 377 tgctccttcaagatgtcgaggcaaatgctaccgttgctgttaatgttgggatggaacacc 318 Query: 434 ttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagt 493 || || |||| || ||||| || |||||||||||||| ||||| || || || || || Sbjct: 317 -ttggtcctaaaggccaccttaggaggcttgaatgggtaatccggagggaaatggatggt 259 Query: 494 aaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgcca 553 || | || ||||| |||||||| || || || || |||||||| ||||| || ||||| Sbjct: 258 tacaaggaaaacacctccagcataaggactctctgaaggacccattatcgttgcctgcca 199 Query: 554 gtggaacatatcttctgccacangaccggcgct 586 ||| ||||| ||||| || ||| |||| ||||| Sbjct: 198 gtgaaacatgtcttcagcaacaggacctgcgct 166
>ref|NM_180850.1| Arabidopsis thaliana UBC10; ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G53300 (UBC10) transcript variant AT5G53300.1 mRNA, complete cds Length = 856 Score = 60.0 bits (30), Expect = 9e-06 Identities = 168/213 (78%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 374 tgctccttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacc 433 |||||||||||||| || || || ||||| || |||||||| || || || ||||| ||| Sbjct: 396 tgctccttcaagatgtcgaggcaaatgctaccgttgctgttaatgttgggatggaacacc 337 Query: 434 ttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagt 493 || || |||| || ||||| || |||||||||||||| ||||| || || || || || Sbjct: 336 -ttggtcctaaaggccaccttaggaggcttgaatgggtaatccggagggaaatggatggt 278 Query: 494 aaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgcca 553 || | || ||||| |||||||| || || || || |||||||| ||||| || ||||| Sbjct: 277 tacaaggaaaacacctccagcataaggactctctgaaggacccattatcgttgcctgcca 218 Query: 554 gtggaacatatcttctgccacangaccggcgct 586 ||| ||||| ||||| || ||| |||| ||||| Sbjct: 217 gtgaaacatgtcttcagcaacaggacctgcgct 185
>ref|NM_200959.2| Danio rerio zgc:55886 (zgc:55886), mRNA Length = 1935 Score = 60.0 bits (30), Expect = 9e-06 Identities = 79/94 (84%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 394 acagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaatgcaacct 453 ||||||||| |||||||||||||||||||||| || || | |||| |||||||||||| Sbjct: 502 acagatgctgccattgctgttgatatttgggt-gataaattcttgtggtaaatgcaacct 444 Query: 454 tgggtggcttgaatgggtagtccgggggaaagtg 487 | || || ||||| ||||| || | ||||||||| Sbjct: 443 ttggcggtttgaaggggtaatctgtgggaaagtg 410
>gb|AY724500.1| Rattus norvegicus clone UI-R-FJ0-cpx-a-24-0-UI unknown mRNA Length = 2115 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 483 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 425 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 424 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 365 Query: 506 accacc 511 |||||| Sbjct: 364 accacc 359
>gb|BC072696.1| Rattus norvegicus ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), mRNA (cDNA clone MGC:91644 IMAGE:7105617), complete cds Length = 1475 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 459 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 401 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 400 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 341 Query: 506 accacc 511 |||||| Sbjct: 340 accacc 335
>gb|AC091474.2| Mus musculus chromosome X clone RP21-643D22 complete sequence Length = 198426 Score = 60.0 bits (30), Expect = 9e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 195620 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 195678 Query: 446 tgcaaccttgggtggcttgaatgggtagtc 475 ||||||||| ||||| ||||| |||||||| Sbjct: 195679 tgcaaccttaggtggtttgaaggggtagtc 195708
>gb|BC023266.1| Mus musculus ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), mRNA (cDNA clone IMAGE:2646785), partial cds Length = 1279 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 265 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 207 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 206 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 147 Query: 506 accacc 511 |||||| Sbjct: 146 accacc 141
>gb|BC048896.1| Danio rerio zgc:55886, mRNA (cDNA clone MGC:55886 IMAGE:3818716), complete cds Length = 1796 Score = 60.0 bits (30), Expect = 9e-06 Identities = 79/94 (84%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 394 acagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaatgcaacct 453 ||||||||| |||||||||||||||||||||| || || | |||| |||||||||||| Sbjct: 444 acagatgctgccattgctgttgatatttgggt-gataaattcttgtggtaaatgcaacct 386 Query: 454 tgggtggcttgaatgggtagtccgggggaaagtg 487 | || || ||||| ||||| || | ||||||||| Sbjct: 385 ttggcggtttgaaggggtaatctgtgggaaagtg 352
>ref|XM_974387.1| PREDICTED: Mus musculus similar to ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) (LOC630212), mRNA Length = 444 Score = 60.0 bits (30), Expect = 9e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 263 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 205 Query: 446 tgcaaccttgggtggcttgaatgggtagtc 475 ||||||||| ||||| ||||| |||||||| Sbjct: 204 tgcaaccttaggtggtttgaaggggtagtc 175
>emb|Z14991.1|ATUBC10 A.thaliana UBC10 mRNA for ubiquitin conjugating enzyme homolog Length = 818 Score = 60.0 bits (30), Expect = 9e-06 Identities = 168/213 (78%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 374 tgctccttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacc 433 |||||||||||||| || || || ||||| || |||||||| || || || ||||| ||| Sbjct: 407 tgctccttcaagatgtcgaggcaaatgctaccgttgctgttaatgttgggatggaacacc 348 Query: 434 ttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagt 493 || || |||| || ||||| || |||||||||||||| ||||| || || || || || Sbjct: 347 -ttggtcctaaaggccaccttaggaggcttgaatgggtaatccggagggaaatggatggt 289 Query: 494 aaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgcca 553 || | || ||||| |||||||| || || || || |||||||| ||||| || ||||| Sbjct: 288 tacaaggaaaacacctccagcataaggactctctgaaggacccattatcgttgcctgcca 229 Query: 554 gtggaacatatcttctgccacangaccggcgct 586 ||| ||||| ||||| || ||| |||| ||||| Sbjct: 228 gtgaaacatgtcttcagcaacaggacctgcgct 196
>gb|AY113937.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC10 (At5g53300) mRNA, complete cds Length = 478 Score = 60.0 bits (30), Expect = 9e-06 Identities = 168/213 (78%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 374 tgctccttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacc 433 |||||||||||||| || || || ||||| || |||||||| || || || ||||| ||| Sbjct: 275 tgctccttcaagatgtcgaggcaaatgctaccgttgctgttaatgttgggatggaacacc 216 Query: 434 ttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagt 493 || || |||| || ||||| || |||||||||||||| ||||| || || || || || Sbjct: 215 -ttggtcctaaaggccaccttaggaggcttgaatgggtaatccggagggaaatggatggt 157 Query: 494 aaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgcca 553 || | || ||||| |||||||| || || || || |||||||| ||||| || ||||| Sbjct: 156 tacaaggaaaacacctccagcataaggactctctgaaggacccattatcgttgcctgcca 97 Query: 554 gtggaacatatcttctgccacangaccggcgct 586 ||| ||||| ||||| || ||| |||| ||||| Sbjct: 96 gtgaaacatgtcttcagcaacaggacctgcgct 64
>gb|AF326872.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC10 (At5g53300) mRNA, complete cds Length = 768 Score = 60.0 bits (30), Expect = 9e-06 Identities = 168/213 (78%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 374 tgctccttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacc 433 |||||||||||||| || || || ||||| || |||||||| || || || ||||| ||| Sbjct: 369 tgctccttcaagatgtcgaggcaaatgctaccgttgctgttaatgttgggatggaacacc 310 Query: 434 ttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagt 493 || || |||| || ||||| || |||||||||||||| ||||| || || || || || Sbjct: 309 -ttggtcctaaaggccaccttaggaggcttgaatgggtaatccggagggaaatggatggt 251 Query: 494 aaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgcca 553 || | || ||||| |||||||| || || || || |||||||| ||||| || ||||| Sbjct: 250 tacaaggaaaacacctccagcataaggactctctgaaggacccattatcgttgcctgcca 191 Query: 554 gtggaacatatcttctgccacangaccggcgct 586 ||| ||||| ||||| || ||| |||| ||||| Sbjct: 190 gtgaaacatgtcttcagcaacaggacctgcgct 158
>gb|BC065678.1| Danio rerio zgc:55886, mRNA (cDNA clone MGC:77149 IMAGE:6961245), complete cds Length = 1935 Score = 60.0 bits (30), Expect = 9e-06 Identities = 79/94 (84%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 394 acagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaatgcaacct 453 ||||||||| |||||||||||||||||||||| || || | |||| |||||||||||| Sbjct: 502 acagatgctgccattgctgttgatatttgggt-gataaattcttgtggtaaatgcaacct 444 Query: 454 tgggtggcttgaatgggtagtccgggggaaagtg 487 | || || ||||| ||||| || | ||||||||| Sbjct: 443 ttggcggtttgaaggggtaatctgtgggaaagtg 410
>gb|AY129488.1| Arabidopsis thaliana AT5g53300/K19E1_10 mRNA, complete cds Length = 447 Score = 60.0 bits (30), Expect = 9e-06 Identities = 168/213 (78%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 374 tgctccttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacc 433 |||||||||||||| || || || ||||| || |||||||| || || || ||||| ||| Sbjct: 275 tgctccttcaagatgtcgaggcaaatgctaccgttgctgttaatgttgggatggaacacc 216 Query: 434 ttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagt 493 || || |||| || ||||| || |||||||||||||| ||||| || || || || || Sbjct: 215 -ttggtcctaaaggccaccttaggaggcttgaatgggtaatccggagggaaatggatggt 157 Query: 494 aaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgcca 553 || | || ||||| |||||||| || || || || |||||||| ||||| || ||||| Sbjct: 156 tacaaggaaaacacctccagcataaggactctctgaaggacccattatcgttgcctgcca 97 Query: 554 gtggaacatatcttctgccacangaccggcgct 586 ||| ||||| ||||| || ||| |||| ||||| Sbjct: 96 gtgaaacatgtcttcagcaacaggacctgcgct 64
>gb|BC098220.1| Mus musculus ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), mRNA (cDNA clone MGC:106875 IMAGE:963757), complete cds Length = 1535 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 515 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 457 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 456 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 397 Query: 506 accacc 511 |||||| Sbjct: 396 accacc 391
>emb|CR608137.1| full-length cDNA clone CS0DI034YG18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1379 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 385 gatatcaagacagatgcttccattgctgttgatatttgggtg 426 ||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 325 gatatcaaggcagatgctgccattgctgttgatattagggtg 284
>dbj|AK001446.1| Homo sapiens cDNA FLJ10584 fis, clone NT2RP2003737, highly similar to UBIQUITIN-CONJUGATING ENZYME E2-17 KD 2 (EC 6.3.2.19) Length = 1398 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 385 gatatcaagacagatgcttccattgctgttgatatttgggtg 426 ||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 349 gatatcaaggcagatgctgccattgctgttgatattagggtg 308
>dbj|AK151594.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830031P20 product:ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), full insert sequence Length = 1520 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 521 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 463 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 462 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 403 Query: 506 accacc 511 |||||| Sbjct: 402 accacc 397
>gb|AY065059.1| Arabidopsis thaliana AT5g53300/K19E1_10 mRNA, complete cds Length = 752 Score = 60.0 bits (30), Expect = 9e-06 Identities = 168/213 (78%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 374 tgctccttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacc 433 |||||||||||||| || || || ||||| || |||||||| || || || ||||| ||| Sbjct: 369 tgctccttcaagatgtcgaggcaaatgctaccgttgctgttaatgttgggatggaacacc 310 Query: 434 ttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagt 493 || || |||| || ||||| || |||||||||||||| ||||| || || || || || Sbjct: 309 -ttggtcctaaaggccaccttaggaggcttgaatgggtaatccggagggaaatggatggt 251 Query: 494 aaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgcca 553 || | || ||||| |||||||| || || || || |||||||| ||||| || ||||| Sbjct: 250 tacaaggaaaacacctccagcataaggactctctgaaggacccattatcgttgcctgcca 191 Query: 554 gtggaacatatcttctgccacangaccggcgct 586 ||| ||||| ||||| || ||| |||| ||||| Sbjct: 190 gtgaaacatgtcttcagcaacaggacctgcgct 158
>dbj|AK159125.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420002M12 product:ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), full insert sequence Length = 1559 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 560 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 502 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 501 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 442 Query: 506 accacc 511 |||||| Sbjct: 441 accacc 436
>dbj|AK152541.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830078K14 product:ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), full insert sequence Length = 1493 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 494 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 436 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 435 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 376 Query: 506 accacc 511 |||||| Sbjct: 375 accacc 370
>dbj|AK167801.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730027J23 product:ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), full insert sequence Length = 2137 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 522 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 464 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 463 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 404 Query: 506 accacc 511 |||||| Sbjct: 403 accacc 398
>dbj|AK167650.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:I530027B11 product:ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), full insert sequence Length = 1497 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 498 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 440 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 439 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 380 Query: 506 accacc 511 |||||| Sbjct: 379 accacc 374
>dbj|AK153423.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830159L11 product:ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), full insert sequence Length = 1717 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 560 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 502 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 501 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 442 Query: 506 accacc 511 |||||| Sbjct: 441 accacc 436
>dbj|AK153410.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830156M24 product:ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), full insert sequence Length = 1520 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 521 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 463 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 462 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 403 Query: 506 accacc 511 |||||| Sbjct: 402 accacc 397
>dbj|AK152231.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830057E05 product:ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), full insert sequence Length = 1520 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 521 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 463 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 462 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 403 Query: 506 accacc 511 |||||| Sbjct: 402 accacc 397
>dbj|AK151295.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830027M09 product:ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), full insert sequence Length = 2079 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 614 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 556 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 555 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 496 Query: 506 accacc 511 |||||| Sbjct: 495 accacc 490
>dbj|AK153100.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830122N08 product:ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), full insert sequence Length = 2079 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 614 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 556 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 555 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 496 Query: 506 accacc 511 |||||| Sbjct: 495 accacc 490
>dbj|AK159963.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420041E15 product:ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), full insert sequence Length = 2109 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 494 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 436 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 435 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 376 Query: 506 accacc 511 |||||| Sbjct: 375 accacc 370
>dbj|AK153111.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830123E16 product:ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), full insert sequence Length = 1521 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 522 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 464 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 463 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 404 Query: 506 accacc 511 |||||| Sbjct: 403 accacc 398
>dbj|AK165235.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F420015L06 product:ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), full insert sequence Length = 2355 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 741 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 683 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 682 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 623 Query: 506 accacc 511 |||||| Sbjct: 622 accacc 617
>dbj|AK159546.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420023I03 product:ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), full insert sequence Length = 1495 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 496 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 438 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 437 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 378 Query: 506 accacc 511 |||||| Sbjct: 377 accacc 372
>dbj|AK167138.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0033L24 product:ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), full insert sequence Length = 1463 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 463 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 405 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 404 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 345 Query: 506 accacc 511 |||||| Sbjct: 344 accacc 339
>dbj|AK167077.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0029L18 product:ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), full insert sequence Length = 1509 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 510 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 452 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 451 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 392 Query: 506 accacc 511 |||||| Sbjct: 391 accacc 386
>dbj|AK169177.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920087L17 product:ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), full insert sequence Length = 2345 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 872 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 814 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 813 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 754 Query: 506 accacc 511 |||||| Sbjct: 753 accacc 748
>dbj|AK009936.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310051N01 product:UBIQUITIN-CONJUGATING ENZYME E2-17 KDA 3 (EC 6.3.2.19) (UBIQUITIN- PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) (E2(17)KB 3) homolog [Homo sapiens], full insert sequence Length = 1437 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 439 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 381 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 380 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 321 Query: 506 accacc 511 |||||| Sbjct: 320 accacc 315
>dbj|AK003163.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1100001F19 product:UBIQUITIN-CONJUGATING ENZYME E2-17 KDA 3 (EC 6.3.2.19) (UBIQUITIN- PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) (E2(17)KB 3) homolog [Homo sapiens], full insert sequence Length = 1450 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 451 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 393 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 392 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 333 Query: 506 accacc 511 |||||| Sbjct: 332 accacc 327
>dbj|AK032885.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720467J07 product:UBIQUITIN-CONJUGATING ENZYME E2-17 KDA 3 (EC 6.3.2.19) (UBIQUITIN- PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) (E2(17)KB 3) homolog [Homo sapiens], full insert sequence Length = 1513 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 510 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 452 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 451 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 392 Query: 506 accacc 511 |||||| Sbjct: 391 accacc 386
>gb|AC004985.2| Homo sapiens PAC clone RP5-1165K10 from 7, complete sequence Length = 159507 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 385 gatatcaagacagatgcttccattgctgttgatatttgggtg 426 ||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 16703 gatatcaaggcagatgctgccattgctgttgatattagggtg 16744
>dbj|AK009276.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310010L05 product:UBIQUITIN-CONJUGATING ENZYME E2-17 KDA 3 (EC 6.3.2.19) (UBIQUITIN- PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) (E2(17)KB 3) homolog [Homo sapiens], full insert sequence Length = 1209 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 442 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 384 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 383 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 324 Query: 506 accacc 511 |||||| Sbjct: 323 accacc 318
>ref|NM_001021190.1| Schizosaccharomyces pombe 972h- ubiquitin conjugating enzyme (SPBC119.02), partial mRNA Length = 444 Score = 60.0 bits (30), Expect = 9e-06 Identities = 90/110 (81%) Strand = Plus / Minus Query: 450 accttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacca 509 ||||| |||||||||||||||||||||| || || ||||| | | || || |||||| Sbjct: 200 acctttggtggcttgaatgggtagtccgtagggaaatgaatggacaagaagaagacacca 141 Query: 510 ccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaa 559 || ||||| ||||| |||| ||||||||||| || |||||||| ||||| Sbjct: 140 cccgcataagggctgtcagcaggacccatgattgtagcttgccaatggaa 91
>dbj|AK088448.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430016N16 product:UBIQUITIN-CONJUGATING ENZYME E2-17 KDA 3 (EC 6.3.2.19) (UBIQUITIN- PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) (E2(17)KB 3) homolog [Homo sapiens], full insert sequence Length = 2079 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 470 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 412 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 411 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 352 Query: 506 accacc 511 |||||| Sbjct: 351 accacc 346
>dbj|AK049906.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630010F02 product:UBIQUITIN-CONJUGATING ENZYME E2-17 KDA 3 (EC 6.3.2.19) (UBIQUITIN- PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) (E2(17)KB 3) homolog [Homo sapiens], full insert sequence Length = 2620 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 501 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 443 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 442 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 383 Query: 506 accacc 511 |||||| Sbjct: 382 accacc 377
>gb|AY039566.1| Arabidopsis thaliana AT5g53300/K19E1_10 mRNA, complete cds Length = 713 Score = 60.0 bits (30), Expect = 9e-06 Identities = 168/213 (78%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 374 tgctccttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacc 433 |||||||||||||| || || || ||||| || |||||||| || || || ||||| ||| Sbjct: 373 tgctccttcaagatgtcgaggcaaatgctaccgttgctgttaatgttgggatggaacacc 314 Query: 434 ttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagt 493 || || |||| || ||||| || |||||||||||||| ||||| || || || || || Sbjct: 313 -ttggtcctaaaggccaccttaggaggcttgaatgggtaatccggagggaaatggatggt 255 Query: 494 aaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgcca 553 || | || ||||| |||||||| || || || || |||||||| ||||| || ||||| Sbjct: 254 tacaaggaaaacacctccagcataaggactctctgaaggacccattatcgttgcctgcca 195 Query: 554 gtggaacatatcttctgccacangaccggcgct 586 ||| ||||| ||||| || ||| |||| ||||| Sbjct: 194 gtgaaacatgtcttcagcaacaggacctgcgct 162
>gb|AF325005.2|AF325005 Arabidopsis thaliana AT5g53300 (AT5g53300/K19E1_10) mRNA, complete cds Length = 731 Score = 60.0 bits (30), Expect = 9e-06 Identities = 168/213 (78%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 374 tgctccttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacc 433 |||||||||||||| || || || ||||| || |||||||| || || || ||||| ||| Sbjct: 364 tgctccttcaagatgtcgaggcaaatgctaccgttgctgttaatgttgggatggaacacc 305 Query: 434 ttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagt 493 || || |||| || ||||| || |||||||||||||| ||||| || || || || || Sbjct: 304 -ttggtcctaaaggccaccttaggaggcttgaatgggtaatccggagggaaatggatggt 246 Query: 494 aaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgcca 553 || | || ||||| |||||||| || || || || |||||||| ||||| || ||||| Sbjct: 245 tacaaggaaaacacctccagcataaggactctctgaaggacccattatcgttgcctgcca 186 Query: 554 gtggaacatatcttctgccacangaccggcgct 586 ||| ||||| ||||| || ||| |||| ||||| Sbjct: 185 gtgaaacatgtcttcagcaacaggacctgcgct 153
>gb|AF324718.2|AF324718 Arabidopsis thaliana AT5g53300 (AT5g53300/K19E1_10) mRNA, complete cds Length = 748 Score = 60.0 bits (30), Expect = 9e-06 Identities = 168/213 (78%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 374 tgctccttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacc 433 |||||||||||||| || || || ||||| || |||||||| || || || ||||| ||| Sbjct: 365 tgctccttcaagatgtcgaggcaaatgctaccgttgctgttaatgttgggatggaacacc 306 Query: 434 ttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagt 493 || || |||| || ||||| || |||||||||||||| ||||| || || || || || Sbjct: 305 -ttggtcctaaaggccaccttaggaggcttgaatgggtaatccggagggaaatggatggt 247 Query: 494 aaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgcca 553 || | || ||||| |||||||| || || || || |||||||| ||||| || ||||| Sbjct: 246 tacaaggaaaacacctccagcataaggactctctgaaggacccattatcgttgcctgcca 187 Query: 554 gtggaacatatcttctgccacangaccggcgct 586 ||| ||||| ||||| || ||| |||| ||||| Sbjct: 186 gtgaaacatgtcttcagcaacaggacctgcgct 154
>gb|BC024351.1| Mus musculus ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), mRNA (cDNA clone IMAGE:5059718), containing frame-shift errors Length = 804 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 549 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 491 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 490 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 431 Query: 506 accacc 511 |||||| Sbjct: 430 accacc 425
>dbj|AK004001.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110031F06 product:UBIQUITIN-CONJUGATING ENZYME E2-17 KDA 3 (EC 6.3.2.19) (UBIQUITIN- PROTEIN LIGASE) (UBIQUITIN CARRIER PROTEIN) (E2(17)KB 3) homolog [Homo sapiens], full insert sequence Length = 1509 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 510 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 452 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 451 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 392 Query: 506 accacc 511 |||||| Sbjct: 391 accacc 386
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 60.0 bits (30), Expect = 9e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Minus Query: 337 aggagcacctttgatactgtcaatgcagggctccatttgctccttcaagatatcaagaca 396 ||||| |||||||||| |||||||| |||||||| | ||||||| | ||| ||||| || Sbjct: 6896291 aggaggacctttgatatggtcaatgctgggctccact-gctccttgaggatgtcaaggca 6896233 Query: 397 gatgcttccattgctgttgatatttgggtg 426 |||||||||||| |||||| |||||||| Sbjct: 6896232 aatgcttccattggagttgatgtttgggtg 6896203
>emb|BX829864.1|CNS0A1IT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB41ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 708 Score = 60.0 bits (30), Expect = 9e-06 Identities = 168/213 (78%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 374 tgctccttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacc 433 |||||||||||||| || || || ||||| || |||||||| || || || ||||| ||| Sbjct: 350 tgctccttcaagatgtcgaggcaaatgctaccgttgctgttaatgttgggatggaacacc 291 Query: 434 ttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagt 493 || || |||| || ||||| || |||||||||||||| ||||| || || || || || Sbjct: 290 -ttggtcctaaaggccaccttaggaggcttgaatgggtaatccggagggaaatggatggt 232 Query: 494 aaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgcca 553 || | || ||||| |||||||| || || || || |||||||| ||||| || ||||| Sbjct: 231 tacaaggaaaacacctccagcataaggactctctgaaggacccattatcgttgcctgcca 172 Query: 554 gtggaacatatcttctgccacangaccggcgct 586 ||| ||||| ||||| || ||| |||| ||||| Sbjct: 171 gtgaaacatgtcttcagcaacaggacctgcgct 139
>ref|NM_031237.1| Rattus norvegicus ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) (Ube2d3), mRNA Length = 1531 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 536 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 478 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 477 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 418 Query: 506 accacc 511 |||||| Sbjct: 417 accacc 412
>gb|AY086447.1| Arabidopsis thaliana clone 25162 mRNA, complete sequence Length = 743 Score = 60.0 bits (30), Expect = 9e-06 Identities = 168/213 (78%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 374 tgctccttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacc 433 |||||||||||||| || || || ||||| || |||||||| || || || ||||| ||| Sbjct: 373 tgctccttcaagatgtcgaggcaaatgctaccgttgctgttaatgttgggatggaacacc 314 Query: 434 ttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagt 493 || || |||| || ||||| || |||||||||||||| ||||| || || || || || Sbjct: 313 -ttggtcctaaaggccaccttaggaggcttgaatgggtaatccggagggaaatggatggt 255 Query: 494 aaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgcca 553 || | || ||||| |||||||| || || || || |||||||| ||||| || ||||| Sbjct: 254 tacaaggaaaacacctccagcataaggactctctgaaggacccattatcgttgcctgcca 195 Query: 554 gtggaacatatcttctgccacangaccggcgct 586 ||| ||||| ||||| || ||| |||| ||||| Sbjct: 194 gtgaaacatgtcttcagcaacaggacctgcgct 162
>dbj|AP006156.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1043F11 Length = 167137 Score = 60.0 bits (30), Expect = 9e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Minus Query: 337 aggagcacctttgatactgtcaatgcagggctccatttgctccttcaagatatcaagaca 396 ||||| |||||||||| |||||||| |||||||| | ||||||| | ||| ||||| || Sbjct: 124186 aggaggacctttgatatggtcaatgctgggctccact-gctccttgaggatgtcaaggca 124128 Query: 397 gatgcttccattgctgttgatatttgggtg 426 |||||||||||| |||||| |||||||| Sbjct: 124127 aatgcttccattggagttgatgtttgggtg 124098
>gb|AY949605.1| Hylobates lar orthologous to Homo sapiens retroposed sequence ENSG00000149345 genomic sequence Length = 443 Score = 60.0 bits (30), Expect = 9e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 262 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 204 Query: 446 tgcaaccttgggtggcttgaatgggtagtc 475 ||||||||| ||||| ||||| |||||||| Sbjct: 203 tgcaaccttaggtggtttgaaggggtagtc 174
>gb|BC057941.1| Mus musculus ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), mRNA (cDNA clone MGC:68121 IMAGE:5323636), complete cds Length = 1500 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 481 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 423 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 422 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 363 Query: 506 accacc 511 |||||| Sbjct: 362 accacc 357
>dbj|AK065902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047C20, full insert sequence Length = 896 Score = 60.0 bits (30), Expect = 9e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Minus Query: 337 aggagcacctttgatactgtcaatgcagggctccatttgctccttcaagatatcaagaca 396 ||||| |||||||||| |||||||| |||||||| | ||||||| | ||| ||||| || Sbjct: 473 aggaggacctttgatatggtcaatgctgggctccact-gctccttgaggatgtcaaggca 415 Query: 397 gatgcttccattgctgttgatatttgggtg 426 |||||||||||| |||||| |||||||| Sbjct: 414 aatgcttccattggagttgatgtttgggtg 385
>dbj|AK059627.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H11, full insert sequence Length = 899 Score = 60.0 bits (30), Expect = 9e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Minus Query: 337 aggagcacctttgatactgtcaatgcagggctccatttgctccttcaagatatcaagaca 396 ||||| |||||||||| |||||||| |||||||| | ||||||| | ||| ||||| || Sbjct: 465 aggaggacctttgatatggtcaatgctgggctccact-gctccttgaggatgtcaaggca 407 Query: 397 gatgcttccattgctgttgatatttgggtg 426 |||||||||||| |||||| |||||||| Sbjct: 406 aatgcttccattggagttgatgtttgggtg 377
>gb|BC004104.2| Homo sapiens ubiquitin-conjugating enzyme E2D 4 (putative), mRNA (cDNA clone MGC:10513 IMAGE:3835609), complete cds Length = 1415 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 385 gatatcaagacagatgcttccattgctgttgatatttgggtg 426 ||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 353 gatatcaaggcagatgctgccattgctgttgatattagggtg 312
>gb|AF125045.1|AF125045 Homo sapiens ubiquitin-conjugating enzyme 1 isoform mRNA, complete cds Length = 1315 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 385 gatatcaagacagatgcttccattgctgttgatatttgggtg 426 ||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 247 gatatcaaggcagatgctgccattgctgttgatattagggtg 206
>gb|AF125044.1|AF125044 Homo sapiens ubiquitin-conjugating enzyme HBUCE1 mRNA, complete cds Length = 1471 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 385 gatatcaagacagatgcttccattgctgttgatatttgggtg 426 ||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 400 gatatcaaggcagatgctgccattgctgttgatattagggtg 359
>ref|NM_015983.2| Homo sapiens ubiquitin-conjugating enzyme E2D 4 (putative) (UBE2D4), mRNA Length = 1398 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 385 gatatcaagacagatgcttccattgctgttgatatttgggtg 426 ||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 349 gatatcaaggcagatgctgccattgctgttgatattagggtg 308
>emb|AJ718239.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT4-11-240, cultivar Bright Yellow 2 Length = 223 Score = 60.0 bits (30), Expect = 9e-06 Identities = 102/125 (81%), Gaps = 1/125 (0%) Strand = Plus / Minus Query: 389 tcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaatgc 448 ||||| || ||||| || |||||||| || ||||||||||||| ||||||| | || || Sbjct: 219 tcaaggcatatgctcccgttgctgtttatgtttgggtggaaaa-cttttgtcctgaaagc 161 Query: 449 aaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacc 508 ||||| |||||||||||||| || || || ||||| ||||| || ||| ||| ||||| Sbjct: 160 taccttaggtggcttgaatggataatcgggaggaaaatgaatcgtcnccagaaaaacacc 101 Query: 509 accag 513 ||||| Sbjct: 100 accag 96
>ref|NM_025356.2| Mus musculus ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) (Ube2d3), mRNA Length = 2620 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 501 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 443 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 442 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 383 Query: 506 accacc 511 |||||| Sbjct: 382 accacc 377
>gb|DQ027024.1| Arabidopsis thaliana ubiquitinating enzyme (At5g53300) mRNA, complete cds Length = 447 Score = 60.0 bits (30), Expect = 9e-06 Identities = 168/213 (78%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 374 tgctccttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacc 433 |||||||||||||| || || || ||||| || |||||||| || || || ||||| ||| Sbjct: 275 tgctccttcaagatgtcgaggcaaatgctaccgttgctgttaatgttgggatggaacacc 216 Query: 434 ttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagt 493 || || |||| || ||||| || |||||||||||||| ||||| || || || || || Sbjct: 215 -ttggtcctaaaggccaccttaggaggcttgaatgggtaatccggagggaaatggatggt 157 Query: 494 aaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgcca 553 || | || ||||| |||||||| || || || || |||||||| ||||| || ||||| Sbjct: 156 tacaaggaaaacacctccagcataaggactctctgaaggacccattatcgttgcctgcca 97 Query: 554 gtggaacatatcttctgccacangaccggcgct 586 ||| ||||| ||||| || ||| |||| ||||| Sbjct: 96 gtgaaacatgtcttcagcaacaggacctgcgct 64
>gb|DQ284472.1| Solanum tuberosum clone 116D11 ubiquitin-conjugating protein-like mRNA, complete cds Length = 531 Score = 60.0 bits (30), Expect = 9e-06 Identities = 112/138 (81%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||| ||||| || ||||||||||| ||||| || || ||||||||| || ||| | || Sbjct: 185 atatccagacaaatacttccattgctattgatgttgggatggaaaacc-ttagttctgaa 127 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 |||||||| || ||||| || || || || || || || ||||| | |||||||||||| Sbjct: 126 ggcaacctttggaggcttaaaaggataatctggagggaaatgaattgaaaccaaaaatac 67 Query: 506 accaccagcatatgggct 523 ||| |||||||| ||||| Sbjct: 66 acctccagcataagggct 49
>gb|U13177.1|RNU13177 Rattus norvegicus clone ubc4a ubiquitin conjugating enzyme (E217kB) mRNA, complete cds Length = 901 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 466 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 408 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 407 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 348 Query: 506 accacc 511 |||||| Sbjct: 347 accacc 342
>gb|U13175.1|RNU13175 Rattus norvegicus clone ubc10a ubiquitin conjugating enzyme (E217kB) mRNA, complete cds Length = 798 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 390 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 332 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 331 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 272 Query: 506 accacc 511 |||||| Sbjct: 271 accacc 266
>gb|L37384.1|YSPUBC4A Schizosaccharomyces pombe UBC4 mRNA fragment Length = 501 Score = 60.0 bits (30), Expect = 9e-06 Identities = 90/110 (81%) Strand = Plus / Minus Query: 450 accttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacca 509 ||||| |||||||||||||||||||||| || || ||||| | | || || |||||| Sbjct: 221 acctttggtggcttgaatgggtagtccgtagggaaatgaatggacaagaagaagacacca 162 Query: 510 ccagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaa 559 || ||||| ||||| |||| ||||||||||| || |||||||| ||||| Sbjct: 161 cccgcataagggctgtcagcaggacccatgattgtagcttgccaatggaa 112
>emb|AL669976.11| Mouse DNA sequence from clone RP23-15J3 on chromosome X, complete sequence Length = 227762 Score = 60.0 bits (30), Expect = 9e-06 Identities = 76/90 (84%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 73763 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 73821 Query: 446 tgcaaccttgggtggcttgaatgggtagtc 475 ||||||||| ||||| ||||| |||||||| Sbjct: 73822 tgcaaccttaggtggtttgaaggggtagtc 73851
>gb|L00640.1|ATHUBCC Arabidopsis thaliana ubiquitin conjugating enzyme mRNA, complete cds Length = 818 Score = 60.0 bits (30), Expect = 9e-06 Identities = 168/213 (78%), Gaps = 1/213 (0%) Strand = Plus / Minus Query: 374 tgctccttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacc 433 |||||||||||||| || || || ||||| || |||||||| || || || ||||| ||| Sbjct: 407 tgctccttcaagatgtcgaggcaaatgctaccgttgctgttaatgttgggatggaacacc 348 Query: 434 ttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagt 493 || || |||| || ||||| || |||||||||||||| ||||| || || || || || Sbjct: 347 -ttggtcctaaaggccaccttaggaggcttgaatgggtaatccggagggaaatggatggt 289 Query: 494 aaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgcca 553 || | || ||||| |||||||| || || || || |||||||| ||||| || ||||| Sbjct: 288 tacaaggaaaacacctccagcataaggactctctgaaggacccattatcgttgcctgcca 229 Query: 554 gtggaacatatcttctgccacangaccggcgct 586 ||| ||||| ||||| || ||| |||| ||||| Sbjct: 228 gtgaaacatgtcttcagcaacaggacctgcgct 196
>dbj|AB006852.1| Rattus norvegicus mRNA for phosphoarginine phosphatase, complete cds Length = 1531 Score = 60.0 bits (30), Expect = 9e-06 Identities = 103/126 (81%), Gaps = 1/126 (0%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| || ||| | ||||| |||| Sbjct: 536 atatcaagacaaatgctgccattactgttaatatttggatgataaat-tcttgttgtaaa 478 Query: 446 tgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatac 505 ||||||||| ||||| ||||| |||||||| | ||||| ||||| || | || ||||| Sbjct: 477 tgcaaccttaggtggtttgaaggggtagtctgtaggaaaatgaattgtcaaaaagaatac 418 Query: 506 accacc 511 |||||| Sbjct: 417 accacc 412
>emb|BX833981.1|CNS0A0DI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL88ZC07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 769 Score = 58.0 bits (29), Expect = 3e-05 Identities = 167/212 (78%), Gaps = 1/212 (0%) Strand = Plus / Minus Query: 374 tgctccttcaagatatcaagacagatgcttccattgctgttgatatttgggtggaaaacc 433 |||||||||||||| || || || ||||| || |||||||| || || || ||||| ||| Sbjct: 362 tgctccttcaagatgtcgaggcaaatgctaccgttgctgttaatgttgggatggaacacc 303 Query: 434 ttttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagt 493 || || |||| || ||||| || |||||||||||||| ||||| || || || || || Sbjct: 302 -ttggtcctaaaggccaccttaggaggcttgaatgggtaatccggagggaaatggatggt 244 Query: 494 aaccaaaaatacaccaccagcatatgggctttcagatggacccatgatcgtcgcttgcca 553 || | || ||||| |||||||| || || || || |||||||| ||||| || ||||| Sbjct: 243 tacaaggaaaacacctccagcataaggactctctgaaggacccattatcgttgcctgcca 184 Query: 554 gtggaacatatcttctgccacangaccggcgc 585 ||| ||||| ||||| || ||| |||| |||| Sbjct: 183 gtgaaacatgtcttcagcaacaggacctgcgc 152
>ref|NM_001031153.1| Gallus gallus ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) (UBE2D3), mRNA Length = 1961 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 436 ttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaa 495 ||||| ||||||||||||| ||||| ||||| |||||||| | ||||||||||| || | Sbjct: 285 ttgttgtaaatgcaaccttaggtggtttgaaagggtagtctgtaggaaagtgaattgtca 226 Query: 496 ccaaaaatacaccacc 511 || ||||||||||| Sbjct: 225 agaagaatacaccacc 210
>emb|CR652711.2|CNS0F2LP Tetraodon nigroviridis full-length cDNA Length = 910 Score = 56.0 bits (28), Expect = 1e-04 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 401 cttccattgctgttgatatttgggtggaaaaccttttgttttaaatgcaaccttgggtgg 460 |||||||||||||||||||| |||||| | | ||||||| |||||||||| || ||||| Sbjct: 157 cttccattgctgttgatattagggtggtata-tttttgttgtaaatgcaacttttggtgg 99 Query: 461 cttgaatgggta 472 ||||| ||||| Sbjct: 98 tttgaaggggta 87
>emb|CR650501.2|CNS0F0WB Tetraodon nigroviridis full-length cDNA Length = 974 Score = 56.0 bits (28), Expect = 1e-04 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 401 cttccattgctgttgatatttgggtggaaaaccttttgttttaaatgcaaccttgggtgg 460 |||||||||||||||||||| |||||| | | ||||||| |||||||||| || ||||| Sbjct: 160 cttccattgctgttgatattagggtggtata-tttttgttgtaaatgcaacttttggtgg 102 Query: 461 cttgaatgggta 472 ||||| ||||| Sbjct: 101 tttgaaggggta 90
>emb|AJ719875.1| Gallus gallus mRNA for hypothetical protein, clone 7i20 Length = 1990 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 436 ttgttttaaatgcaaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaa 495 ||||| ||||||||||||| ||||| ||||| |||||||| | ||||||||||| || | Sbjct: 285 ttgttgtaaatgcaaccttaggtggtttgaaagggtagtctgtaggaaagtgaattgtca 226 Query: 496 ccaaaaatacaccacc 511 || ||||||||||| Sbjct: 225 agaagaatacaccacc 210
>gb|AC182754.1| Gasterosteus aculeatus clone VMRC28-42C14, complete sequence Length = 138028 Score = 56.0 bits (28), Expect = 1e-04 Identities = 59/68 (86%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||| ||||| || || |||||||||||||||||||||||| ||| ||||||| | || Sbjct: 12732 atatccagacaaatactcccattgctgttgatatttgggtggtaaa-tttttgttgtgaa 12790 Query: 446 tgcaacct 453 |||||||| Sbjct: 12791 tgcaacct 12798
>ref|NM_127226.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT2G16740 mRNA, complete cds Length = 810 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 531 ggacccatgatcgtcgcttgccagtggaacatatcttct 569 |||||||| || || |||||||||||||||||||||||| Sbjct: 277 ggacccattatagtagcttgccagtggaacatatcttct 239
>ref|XM_463908.1| Oryza sativa (japonica cultivar-group), mRNA Length = 815 Score = 54.0 bits (27), Expect = 5e-04 Identities = 156/198 (78%), Gaps = 1/198 (0%) Strand = Plus / Minus Query: 389 tcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaatgc 448 ||||| |||||| | ||||||||||| || ||||| ||||| ||| || || || ||||| Sbjct: 347 tcaaggcagatgttgccattgctgtttatgtttggatggaacacc-ttggtcttgaatgc 289 Query: 449 aaccttgggtggcttgaatgggtagtccgggggaaagtgaatagtaaccaaaaatacacc 508 ||||| || |||||||| |||||||| || || ||||| || || |||| || || || Sbjct: 288 cacctttggaggcttgaaagggtagtcaggagggaagtggatggtcaccaggaacactcc 229 Query: 509 accagcatatgggctttcagatggacccatgatcgtcgcttgccagtggaacatatcttc 568 |||| || ||||| ||| || |||||||| || ||||||||||||||||| || || Sbjct: 228 tccagagtaggggctgtcattgggccccatgattgttgcttgccagtggaacatgtcatc 169 Query: 569 tgccacangaccggcgct 586 | |||| | |||||||| Sbjct: 168 agacacaggcccggcgct 151
>ref|XM_517968.1| PREDICTED: Pan troglodytes similar to ubiquitin conjugating enzyme (LOC462108), mRNA Length = 1304 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 680 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 622 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 621 tgcaaccttaggtggtttgaaggggta 595
>ref|NM_181838.1| Homo sapiens ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) (UBE2D2), transcript variant 2, mRNA Length = 2879 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 1053 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 995 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 994 tgcaaccttaggtggtttgaaggggta 968
>ref|NM_003339.2| Homo sapiens ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) (UBE2D2), transcript variant 1, mRNA Length = 2715 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 889 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 831 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 830 tgcaaccttaggtggtttgaaggggta 804
>ref|XM_614060.2| PREDICTED: Bos taurus similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 1 (LOC541003), mRNA Length = 2214 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 642 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 584 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 583 tgcaaccttaggtggtttgaaggggta 557
>ref|XM_878133.1| PREDICTED: Bos taurus similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 2 (LOC541003), mRNA Length = 2196 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 642 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 584 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 583 tgcaaccttaggtggtttgaaggggta 557
>ref|NM_019912.1| Mus musculus ubiquitin-conjugating enzyme E2D 2 (Ube2d2), mRNA Length = 2410 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||||| || || | ||||| |||| Sbjct: 649 atatcaagacaaatgctgccattactgttaatatttgggt-gataaattcttgttgtaaa 591 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| || || ||||| ||||| Sbjct: 590 tgcaaccttaggcggtttgaaggggta 564
>gb|AY651263.1| Homo sapiens ubiquitin-conjugating enzyme E2 D2 transcript variant 1 mRNA, complete cds Length = 1715 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 645 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 587 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 586 tgcaaccttaggtggtttgaaggggta 560
>gb|BC003923.1| Mus musculus ubiquitin-conjugating enzyme E2D 2, mRNA (cDNA clone MGC:7285 IMAGE:3485259), complete cds Length = 924 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||||| || || | ||||| |||| Sbjct: 674 atatcaagacaaatgctgccattactgttaatatttgggt-gataaattcttgttgtaaa 616 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| || || ||||| ||||| Sbjct: 615 tgcaaccttaggcggtttgaaggggta 589
>ref|XM_850927.1| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 6 (LOC612742), mRNA Length = 2283 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 469 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 411 Query: 446 tgcaaccttgggtggcttgaatgggta 472 |||||||| ||||||||||| ||||| Sbjct: 410 cgcaaccttaggtggcttgaaggggta 384
>ref|XM_850890.1| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 5 (LOC612742), mRNA Length = 2703 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 889 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 831 Query: 446 tgcaaccttgggtggcttgaatgggta 472 |||||||| ||||||||||| ||||| Sbjct: 830 cgcaaccttaggtggcttgaaggggta 804
>ref|XM_850849.1| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 4 (LOC612742), mRNA Length = 2324 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 670 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 612 Query: 446 tgcaaccttgggtggcttgaatgggta 472 |||||||| ||||||||||| ||||| Sbjct: 611 cgcaaccttaggtggcttgaaggggta 585
>ref|XM_850803.1| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 3 (LOC612742), mRNA Length = 1121 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 670 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 612 Query: 446 tgcaaccttgggtggcttgaatgggta 472 |||||||| ||||||||||| ||||| Sbjct: 611 cgcaaccttaggtggcttgaaggggta 585
>ref|XM_843232.1| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 1 (LOC612742), mRNA Length = 1113 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 670 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 612 Query: 446 tgcaaccttgggtggcttgaatgggta 472 |||||||| ||||||||||| ||||| Sbjct: 611 cgcaaccttaggtggcttgaaggggta 585
>gb|BC114654.1| Bos taurus cDNA clone MGC:138112 IMAGE:8082521, complete cds Length = 1851 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 750 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 692 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 691 tgcaaccttaggtggtttgaaggggta 665
>emb|Z14989.1|ATUBC8 A.thaliana UBC8 gene for ubiquitin conjugating enzyme homolog Length = 1447 Score = 54.0 bits (27), Expect = 5e-04 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 361 gcagggctccatttgctccttcaagatatcaagacagatgcttccattgctgttgatatt 420 ||||||||||||| | || ||||| || ||||| || |||||||| |||||||||||||| Sbjct: 925 gcagggctccatt-gttctttcaaaatgtcaaggcaaatgcttccgttgctgttgatatt 867 Query: 421 tgggtggaaaacctt 435 ||||| || ||||| Sbjct: 866 agggtgaaacacctt 852
>gb|AY091232.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2 (At2g16740) mRNA, complete cds Length = 478 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 531 ggacccatgatcgtcgcttgccagtggaacatatcttct 569 |||||||| || || |||||||||||||||||||||||| Sbjct: 119 ggacccattatagtagcttgccagtggaacatatcttct 81
>gb|AY063872.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme (At2g16740) mRNA, complete cds Length = 825 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 531 ggacccatgatcgtcgcttgccagtggaacatatcttct 569 |||||||| || || |||||||||||||||||||||||| Sbjct: 276 ggacccattatagtagcttgccagtggaacatatcttct 238
>gb|BC033349.1| Homo sapiens ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), transcript variant 1, mRNA (cDNA clone MGC:42697 IMAGE:4827210), complete cds Length = 1979 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 889 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 831 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 830 tgcaaccttaggtggtttgaaggggta 804
>emb|CR623635.1| full-length cDNA clone CS0DF013YF13 of Fetal brain of Homo sapiens (human) Length = 1542 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 519 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 461 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 460 tgcaaccttaggtggtttgaaggggta 434
>emb|CR622545.1| full-length cDNA clone CS0DM006YN11 of Fetal liver of Homo sapiens (human) Length = 1579 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 519 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 461 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 460 tgcaaccttaggtggtttgaaggggta 434
>emb|CR618308.1| full-length cDNA clone CS0DA012YJ02 of Neuroblastoma of Homo sapiens (human) Length = 1684 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 650 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 592 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 591 tgcaaccttaggtggtttgaaggggta 565
>emb|CR611730.1| full-length cDNA clone CS0DF003YM24 of Fetal brain of Homo sapiens (human) Length = 1580 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 511 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 453 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 452 tgcaaccttaggtggtttgaaggggta 426
>emb|CR607642.1| full-length cDNA clone CS0DN004YL06 of Adult brain of Homo sapiens (human) Length = 1746 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 708 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 650 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 649 tgcaaccttaggtggtttgaaggggta 623
>emb|CR606151.1| full-length cDNA clone CS0DH001YD11 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1833 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 777 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 719 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 718 tgcaaccttaggtggtttgaaggggta 692
>emb|CR596483.1| full-length cDNA clone CS0DN002YH07 of Adult brain of Homo sapiens (human) Length = 1698 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 658 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 600 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 599 tgcaaccttaggtggtttgaaggggta 573
>emb|CR592107.1| full-length cDNA clone CS0DI014YF13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 897 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 658 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 600 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 599 tgcaaccttaggtggtttgaaggggta 573
>emb|CR591688.1| full-length cDNA clone CS0DB009YK19 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1690 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 691 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 633 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 632 tgcaaccttaggtggtttgaaggggta 606
>dbj|AK001311.1| Homo sapiens cDNA FLJ10449 fis, clone NT2RP1000947, highly similar to Human E2 ubiquitin conjugating enzyme UbcH5B mRNA Length = 1732 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 662 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 604 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 603 tgcaaccttaggtggtttgaaggggta 577
>dbj|AK001428.1| Homo sapiens cDNA FLJ10566 fis, clone NT2RP2002959, highly similar to UBIQUITIN-CONJUGATING ENZYME E2-17 KD 2 (EC 6.3.2.19) Length = 2526 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 716 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 658 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 657 tgcaaccttaggtggtttgaaggggta 631
>gb|AY291287.1| Bos taurus E2 ubiquitin conjugating enzyme UbcH5B (UBCH5B) mRNA, partial cds Length = 267 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||| | || || | ||||| |||| Sbjct: 206 atatcaagacaaatgctgccattactgttaatatttggat-gataaattcttgttgtaaa 148 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| ||||| ||||| ||||| Sbjct: 147 tgcaaccttaggtggtttgaaggggta 121
>gb|AC005825.4| Arabidopsis thaliana chromosome 2 clone T24I21 map mi398, complete sequence Length = 112792 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 531 ggacccatgatcgtcgcttgccagtggaacatatcttct 569 |||||||| || || |||||||||||||||||||||||| Sbjct: 72486 ggacccattatagtagcttgccagtggaacatatcttct 72448
>dbj|AK136197.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420474N15 product:ubiquitin-conjugating enzyme E2D 2, full insert sequence Length = 2363 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||||| || || | ||||| |||| Sbjct: 631 atatcaagacaaatgctgccattactgttaatatttgggt-gataaattcttgttgtaaa 573 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| || || ||||| ||||| Sbjct: 572 tgcaaccttaggcggtttgaaggggta 546
>dbj|AK139623.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020006O10 product:ubiquitin-conjugating enzyme E2D 2, full insert sequence Length = 2162 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||||| || || | ||||| |||| Sbjct: 659 atatcaagacaaatgctgccattactgttaatatttgggt-gataaattcttgttgtaaa 601 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| || || ||||| ||||| Sbjct: 600 tgcaaccttaggcggtttgaaggggta 574
>dbj|AK148089.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370013N14 product:ubiquitin-conjugating enzyme E2D 2, full insert sequence Length = 1854 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||||| || || | ||||| |||| Sbjct: 515 atatcaagacaaatgctgccattactgttaatatttgggt-gataaattcttgttgtaaa 457 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| || || ||||| ||||| Sbjct: 456 tgcaaccttaggcggtttgaaggggta 430
>dbj|AK147568.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1080J15 product:ubiquitin-conjugating enzyme E2D 2, full insert sequence Length = 8158 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||||| || || | ||||| |||| Sbjct: 6379 atatcaagacaaatgctgccattactgttaatatttgggt-gataaattcttgttgtaaa 6321 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| || || ||||| ||||| Sbjct: 6320 tgcaaccttaggcggtttgaaggggta 6294
>dbj|AK162093.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420408P12 product:ubiquitin-conjugating enzyme E2D 2, full insert sequence Length = 2255 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||||| || || | ||||| |||| Sbjct: 498 atatcaagacaaatgctgccattactgttaatatttgggt-gataaattcttgttgtaaa 440 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| || || ||||| ||||| Sbjct: 439 tgcaaccttaggcggtttgaaggggta 413
>dbj|AK160567.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410124B20 product:ubiquitin-conjugating enzyme E2D 2, full insert sequence Length = 905 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||||| || || | ||||| |||| Sbjct: 666 atatcaagacaaatgctgccattactgttaatatttgggt-gataaattcttgttgtaaa 608 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| || || ||||| ||||| Sbjct: 607 tgcaaccttaggcggtttgaaggggta 581
>dbj|AK172088.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830035L19 product:ubiquitin-conjugating enzyme E2D 2, full insert sequence Length = 2299 Score = 54.0 bits (27), Expect = 5e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 386 atatcaagacagatgcttccattgctgttgatatttgggtggaaaaccttttgttttaaa 445 ||||||||||| ||||| ||||| ||||| |||||||||| || || | ||||| |||| Sbjct: 520 atatcaagacaaatgctgccattactgttaatatttgggt-gataaattcttgttgtaaa 462 Query: 446 tgcaaccttgggtggcttgaatgggta 472 ||||||||| || || ||||| ||||| Sbjct: 461 tgcaaccttaggcggtttgaaggggta 435 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,411,564 Number of Sequences: 3902068 Number of extensions: 5411564 Number of successful extensions: 104685 Number of sequences better than 10.0: 476 Number of HSP's better than 10.0 without gapping: 450 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 103232 Number of HSP's gapped (non-prelim): 1326 length of query: 586 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 563 effective length of database: 17,143,297,704 effective search space: 9651676607352 effective search space used: 9651676607352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
