ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal15h07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YEEJ_ECO57 (Q8X8V7) Hypothetical protein yeeJ 30 4.3
2DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-re... 30 5.7

>YEEJ_ECO57 (Q8X8V7) Hypothetical protein yeeJ|
          Length = 2660

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = -2

Query: 572 VQESPAVNSPSTVSENAVDKPPPAMSFNFEQEVQVNQKEIMDMYMKSMQQFTESLAKM 399
           V++   ++ P+ VSEN +  PP   S N EQ++    ++I  +  + M   +E  A M
Sbjct: 109 VRQGDELDVPAQVSENNLTPPPGNSSGNLEQQIASTSQQIGSLLAEDMN--SEQAANM 164



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>DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-related formin-2)|
           (DRF2) (mDia3)
          Length = 1098

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 18/63 (28%), Positives = 36/63 (57%)
 Frame = -2

Query: 575 TVQESPAVNSPSTVSENAVDKPPPAMSFNFEQEVQVNQKEIMDMYMKSMQQFTESLAKMK 396
           T +E P +   S   + AV + PPA+  + ++ + +++KE++D++ K M+    +  K K
Sbjct: 59  TKREKPVIQH-SIDYQTAVVEIPPALIVHDDRSLILSEKEVLDLFEKMMEDMNLNEEK-K 116

Query: 395 LPL 387
            PL
Sbjct: 117 APL 119


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,381,774
Number of Sequences: 219361
Number of extensions: 902593
Number of successful extensions: 2647
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2647
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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