ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal14p01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108531.1| Zea mays PCO112988 mRNA sequence Length = 792 Score = 335 bits (169), Expect = 9e-89 Identities = 251/277 (90%), Gaps = 1/277 (0%) Strand = Plus / Minus Query: 242 ctaaaatccgtgaatcttgatactctctttctttgcaagtccagcctgcactagaaatgt 301 ||||||||||||||||||||| || ||||| || | | ||| ||||| |||||||| || Sbjct: 520 ctaaaatccgtgaatcttgatgctatcttttttcacgattccggcctggactagaaaagt 461 Query: 302 agcaacattcttacgctgatcaccttggagttggatgacctggcctagttctggatcctg 361 ||| ||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||||| Sbjct: 460 agcgacatttttacgctgatcaccttgcagttgaatgacctggcctagctctggatcctg 401 Query: 362 gactacagtaccattacagcagaattcctttttgagatccttgagaatcttgttgtagct 421 ||||||||||||||| |||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 400 gactacagtaccattgcagcagaactcttttttgagatccttgaggatcttgttgtagct 341 Query: 422 gtagtctttcttcaagccctgaacagttgtcagactctttcttccgttgcgctgctggac 481 ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 340 gtactctttcttcaagccctgaacagttgtcagactcttccttccgttgcgctgctgaat 281 Query: 482 acgcacatgcacatagttcttttgatccagcaccagc 518 |||||| ||||||||| || ||||||||||||||||| Sbjct: 280 acgcacgtgcacatag-tcctttgatccagcaccagc 245
>ref|NM_190883.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 360 Score = 291 bits (147), Expect = 1e-75 Identities = 251/283 (88%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 235 gtgttgcctaaaatccgtgaatcttgatactctctttctttgcaagtccagcc-tgcact 293 |||| |||||||| ||||| || ||||| |||||||||||| ||| ||||||| || ||| Sbjct: 356 gtgtagcctaaaacccgtgtattttgatgctctctttctttacaattccagccctgaact 297 Query: 294 agaaatgtagcaacattcttacgctgatcaccttggagttggatgacctggcctagttct 353 || || || |||||||| ||||||||||||||||| ||||| ||||||||||||| ||| Sbjct: 296 aggaacgtcgcaacatttttacgctgatcaccttgaagttgaatgacctggcctaactct 237 Query: 354 ggatcctggactacagtaccattacagcagaattcctttttgagatccttgagaatcttg 413 ||||| |||||||||||||||||||| |||||||||||||| ||||||||||| || ||| Sbjct: 236 ggatcttggactacagtaccattacaacagaattcctttttcagatccttgaggattttg 177 Query: 414 ttgtagctgtagtctttcttcaagccctgaacagttgtcagactctttcttccgttgcgc 473 ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 176 ttgtaactgtactctttcttcaagccctgaacagtagtcagactctttcttccgttgcgc 117 Query: 474 tgctggacacgcacatgcacatagttcttttgatccagcacca 516 ||||| | ||||| || |||||| || ||||||||||||||| Sbjct: 116 tgctgaatgcgcacgtgtacatag-tcctttgatccagcacca 75
>ref|XM_475493.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 348 Score = 254 bits (128), Expect = 3e-64 Identities = 218/248 (87%) Strand = Plus / Minus Query: 249 ccgtgaatcttgatactctctttctttgcaagtccagcctgcactagaaatgtagcaaca 308 |||||||||||||| | || ||||| |||| |||||||| ||||| || || |||||| Sbjct: 341 ccgtgaatcttgatgttgtccttcttagcaatcccagcctgaactaggaacgtggcaaca 282 Query: 309 ttcttacgctgatcaccttggagttggatgacctggcctagttctggatcctggactaca 368 |||||||||||||||||||| || || ||||||||||| || |||||||| ||||||||| Sbjct: 281 ttcttacgctgatcaccttgaagctgaatgacctggccaagctctggatcttggactaca 222 Query: 369 gtaccattacagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtct 428 |||||||| |||||||| |||||||| ||||||||||| ||||||||||| ||||| || Sbjct: 221 gtaccattgcagcagaactcctttttcagatccttgaggatcttgttgtaactgtactcc 162 Query: 429 ttcttcaagccctgaacagttgtcagactctttcttccgttgcgctgctggacacgcaca 488 ||||| |||||||||||||| || ||||||||||| |||||||||||||||| |||||| Sbjct: 161 ttctttaagccctgaacagtagttagactctttctgccgttgcgctgctggatgcgcaca 102 Query: 489 tgcacata 496 |||||||| Sbjct: 101 tgcacata 94
>dbj|AK070301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049M22, full insert sequence Length = 1410 Score = 254 bits (128), Expect = 3e-64 Identities = 218/248 (87%) Strand = Plus / Minus Query: 249 ccgtgaatcttgatactctctttctttgcaagtccagcctgcactagaaatgtagcaaca 308 |||||||||||||| | || ||||| |||| |||||||| ||||| || || |||||| Sbjct: 1178 ccgtgaatcttgatgttgtccttcttagcaatcccagcctgaactaggaacgtggcaaca 1119 Query: 309 ttcttacgctgatcaccttggagttggatgacctggcctagttctggatcctggactaca 368 |||||||||||||||||||| || || ||||||||||| || |||||||| ||||||||| Sbjct: 1118 ttcttacgctgatcaccttgaagctgaatgacctggccaagctctggatcttggactaca 1059 Query: 369 gtaccattacagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtct 428 |||||||| |||||||| |||||||| ||||||||||| ||||||||||| ||||| || Sbjct: 1058 gtaccattgcagcagaactcctttttcagatccttgaggatcttgttgtaactgtactcc 999 Query: 429 ttcttcaagccctgaacagttgtcagactctttcttccgttgcgctgctggacacgcaca 488 ||||| |||||||||||||| || ||||||||||| |||||||||||||||| |||||| Sbjct: 998 ttctttaagccctgaacagtagttagactctttctgccgttgcgctgctggatgcgcaca 939 Query: 489 tgcacata 496 |||||||| Sbjct: 938 tgcacata 931
>gb|AY104121.1| Zea mays PCO141133 mRNA sequence Length = 815 Score = 254 bits (128), Expect = 3e-64 Identities = 218/248 (87%) Strand = Plus / Minus Query: 249 ccgtgaatcttgatactctctttctttgcaagtccagcctgcactagaaatgtagcaaca 308 |||||||||||||| |||||||||| |||| |||||||| ||||| || ||||||||| Sbjct: 506 ccgtgaatcttgatgttctctttcttcgcaatcccagcctgaactaggaaagtagcaaca 447 Query: 309 ttcttacgctgatcaccttggagttggatgacctggcctagttctggatcctggactaca 368 ||||| ||||| ||||||||||| || |||||||||||||| ||||| ||||| |||||| Sbjct: 446 ttcttgcgctggtcaccttggagctgaatgacctggcctagctctgggtcctgaactaca 387 Query: 369 gtaccattacagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtct 428 |||||||| |||||||||||||| || ||||||||||| |||||||| |||||| | ||| Sbjct: 386 gtaccattgcagcagaattccttcttcagatccttgaggatcttgttatagctgaactct 327 Query: 429 ttcttcaagccctgaacagttgtcagactctttcttccgttgcgctgctggacacgcaca 488 ||||||| ||||| || || |||||||||||||| |||||||||||||||| |||||| Sbjct: 326 ttcttcagaccctggactgtagtcagactctttctgccgttgcgctgctggatgcgcaca 267 Query: 489 tgcacata 496 |||||||| Sbjct: 266 tgcacata 259
>dbj|AK058219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F05, full insert sequence Length = 731 Score = 246 bits (124), Expect = 6e-62 Identities = 217/248 (87%) Strand = Plus / Minus Query: 249 ccgtgaatcttgatactctctttctttgcaagtccagcctgcactagaaatgtagcaaca 308 |||||||||||||| | || ||||| |||| |||||||| ||||| || || |||||| Sbjct: 499 ccgtgaatcttgatgttgtccttcttagcaatcccagcctgaactaggaacgtggcaaca 440 Query: 309 ttcttacgctgatcaccttggagttggatgacctggcctagttctggatcctggactaca 368 |||||||||||||||||||| || || ||||||||||| || |||||||| ||||||||| Sbjct: 439 ttcttacgctgatcaccttgaagctgaatgacctggccaagctctggatcttggactaca 380 Query: 369 gtaccattacagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtct 428 |||||||| |||||||| |||||||| ||||||||||| ||||||||||| ||||| || Sbjct: 379 gtaccattgcagcagaactcctttttcagatccttgaggatcttgttgtaactgtactcc 320 Query: 429 ttcttcaagccctgaacagttgtcagactctttcttccgttgcgctgctggacacgcaca 488 ||||| |||||||||||||| || ||||||||||| |||||||||||||||| | |||| Sbjct: 319 ttctttaagccctgaacagtagttagactctttctgccgttgcgctgctggatgcacaca 260 Query: 489 tgcacata 496 |||||||| Sbjct: 259 tgcacata 252
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 210 bits (106), Expect = 3e-51 Identities = 161/178 (90%), Gaps = 1/178 (0%) Strand = Plus / Plus Query: 339 acctggcctagttctggatcctggactacagtaccattacagcagaattcctttttgaga 398 |||||||||| |||||||| |||||||||||||||||||| |||||||||||||| ||| Sbjct: 33644913 acctggcctaactctggatcttggactacagtaccattacaacagaattcctttttcaga 33644972 Query: 399 tccttgagaatcttgttgtagctgtagtctttcttcaagccctgaacagttgtcagactc 458 |||||||| || |||||||| ||||| ||||||||||||||||||||||| ||||||||| Sbjct: 33644973 tccttgaggattttgttgtaactgtactctttcttcaagccctgaacagtagtcagactc 33645032 Query: 459 tttcttccgttgcgctgctggacacgcacatgcacatagttcttttgatccagcacca 516 |||||||||||||||||||| | ||||| || |||||| || ||||||||||||||| Sbjct: 33645033 tttcttccgttgcgctgctgaatgcgcacgtgtacatag-tcctttgatccagcacca 33645089 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 286 cctgcactagaaatgtagcaacattcttacgctgatcaccttggagttggatgacctg 343 |||| ||||| || || |||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 33644768 cctgaactaggaacgtcgcaacatttttacgctgatcaccttgaagttgaatgacctg 33644825 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 235 gtgttgcctaaaatccgtgaatcttgatactctctttctttgcaagtccagcct 288 |||| |||||||| ||||| || ||||| |||||||||||| ||| |||||||| Sbjct: 33644640 gtgtagcctaaaacccgtgtattttgatgctctctttctttacaattccagcct 33644693
>dbj|AP003290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684C02 Length = 80086 Score = 210 bits (106), Expect = 3e-51 Identities = 161/178 (90%), Gaps = 1/178 (0%) Strand = Plus / Plus Query: 339 acctggcctagttctggatcctggactacagtaccattacagcagaattcctttttgaga 398 |||||||||| |||||||| |||||||||||||||||||| |||||||||||||| ||| Sbjct: 59785 acctggcctaactctggatcttggactacagtaccattacaacagaattcctttttcaga 59844 Query: 399 tccttgagaatcttgttgtagctgtagtctttcttcaagccctgaacagttgtcagactc 458 |||||||| || |||||||| ||||| ||||||||||||||||||||||| ||||||||| Sbjct: 59845 tccttgaggattttgttgtaactgtactctttcttcaagccctgaacagtagtcagactc 59904 Query: 459 tttcttccgttgcgctgctggacacgcacatgcacatagttcttttgatccagcacca 516 |||||||||||||||||||| | ||||| || |||||| || ||||||||||||||| Sbjct: 59905 tttcttccgttgcgctgctgaatgcgcacgtgtacatag-tcctttgatccagcacca 59961 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 286 cctgcactagaaatgtagcaacattcttacgctgatcaccttggagttggatgacctg 343 |||| ||||| || || |||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 59640 cctgaactaggaacgtcgcaacatttttacgctgatcaccttgaagttgaatgacctg 59697 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 235 gtgttgcctaaaatccgtgaatcttgatactctctttctttgcaagtccagcct 288 |||| |||||||| ||||| || ||||| |||||||||||| ||| |||||||| Sbjct: 59512 gtgtagcctaaaacccgtgtattttgatgctctctttctttacaattccagcct 59565
>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04, complete sequence Length = 122599 Score = 186 bits (94), Expect = 5e-44 Identities = 142/158 (89%) Strand = Plus / Minus Query: 339 acctggcctagttctggatcctggactacagtaccattacagcagaattcctttttgaga 398 |||||||| || |||||||| ||||||||||||||||| |||||||| |||||||| ||| Sbjct: 79955 acctggccaagctctggatcttggactacagtaccattgcagcagaactcctttttcaga 79896 Query: 399 tccttgagaatcttgttgtagctgtagtctttcttcaagccctgaacagttgtcagactc 458 |||||||| ||||||||||| ||||| || ||||| |||||||||||||| || |||||| Sbjct: 79895 tccttgaggatcttgttgtaactgtactccttctttaagccctgaacagtagttagactc 79836 Query: 459 tttcttccgttgcgctgctggacacgcacatgcacata 496 ||||| |||||||||||||||| |||||||||||||| Sbjct: 79835 tttctgccgttgcgctgctggatgcgcacatgcacata 79798 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 286 cctgcactagaaatgtagcaacattcttacgctgatcaccttggagttggatgacctg 343 |||| ||||| || || |||||||||||||||||||||||||| || || |||||||| Sbjct: 80087 cctgaactaggaacgtggcaacattcttacgctgatcaccttgaagctgaatgacctg 80030
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 186 bits (94), Expect = 5e-44 Identities = 142/158 (89%) Strand = Plus / Minus Query: 339 acctggcctagttctggatcctggactacagtaccattacagcagaattcctttttgaga 398 |||||||| || |||||||| ||||||||||||||||| |||||||| |||||||| ||| Sbjct: 24394165 acctggccaagctctggatcttggactacagtaccattgcagcagaactcctttttcaga 24394106 Query: 399 tccttgagaatcttgttgtagctgtagtctttcttcaagccctgaacagttgtcagactc 458 |||||||| ||||||||||| ||||| || ||||| |||||||||||||| || |||||| Sbjct: 24394105 tccttgaggatcttgttgtaactgtactccttctttaagccctgaacagtagttagactc 24394046 Query: 459 tttcttccgttgcgctgctggacacgcacatgcacata 496 ||||| |||||||||||||||| |||||||||||||| Sbjct: 24394045 tttctgccgttgcgctgctggatgcgcacatgcacata 24394008 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 286 cctgcactagaaatgtagcaacattcttacgctgatcaccttggagttggatgacctg 343 |||| ||||| || || |||||||||||||||||||||||||| || || |||||||| Sbjct: 24394297 cctgaactaggaacgtggcaacattcttacgctgatcaccttgaagctgaatgacctg 24394240 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 339 acctggcctagttctggatcctggactacagtaccattacagcagaattcctttttgaga 398 ||||||||||| |||||||| | ||||||| || ||||||| | ||||||||||| ||| Sbjct: 19105512 acctggcctagatctggatcttagactacaataacattacaaccgaattccttttccaga 19105571 Query: 399 tcct 402 |||| Sbjct: 19105572 tcct 19105575 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 451 tcagactctttcttccgttgcgctgctggacacgcacatgcacatagttcttt 503 ||||| |||||||||||||| |||| || | ||||||||||||||| |||| Sbjct: 19105613 tcagattctttcttccgttgtgctgttgaatgggcacatgcacatagtccttt 19105665
>gb|AY365040.1| Zea mays translation initiation factor-like gene, partial sequence Length = 656 Score = 163 bits (82), Expect = 7e-37 Identities = 139/158 (87%) Strand = Plus / Minus Query: 339 acctggcctagttctggatcctggactacagtaccattacagcagaattcctttttgaga 398 ||||||||||| ||||| ||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 551 acctggcctagctctgggtcctgaactacagtaccattgcagcagaattccttcttcaga 492 Query: 399 tccttgagaatcttgttgtagctgtagtctttcttcaagccctgaacagttgtcagactc 458 |||||||| |||||||| |||||| | || ||||||| ||||| || || ||||||||| Sbjct: 491 tccttgaggatcttgttatagctgaactccttcttcagaccctggactgtagtcagactc 432 Query: 459 tttcttccgttgcgctgctggacacgcacatgcacata 496 ||||| |||||||||||||||| |||||||||||||| Sbjct: 431 tttctgccgttgcgctgctggatgcgcacatgcacata 394
>gb|BT013262.1| Lycopersicon esculentum clone 134804F, mRNA sequence Length = 1343 Score = 155 bits (78), Expect = 2e-34 Identities = 150/174 (86%) Strand = Plus / Minus Query: 281 tccagcctgcactagaaatgtagcaacattcttacgctgatcaccttggagttggatgac 340 ||||||||| || ||||| |||| ||| ||||| | ||| ||||| || ||||| || || Sbjct: 1075 tccagcctggacaagaaaggtagaaacgttcttcctctggtcaccctgaagttgaataac 1016 Query: 341 ctggcctagttctggatcctggactacagtaccattacagcagaattcctttttgagatc 400 |||||||||||| ||||||||||| ||||||||||| ||||||||||| || |||||||| Sbjct: 1015 ctggcctagttcaggatcctggacaacagtaccattgcagcagaattctttcttgagatc 956 Query: 401 cttgagaatcttgttgtagctgtagtctttcttcaagccctgaacagttgtcag 454 ||| || |||||||| |||||| | ||||||||||| ||||| ||||||||||| Sbjct: 955 cttcagtatcttgttatagctgaattctttcttcaacccctgcacagttgtcag 902
>gb|DQ222518.1| Solanum tuberosum clone 120A06 unknown mRNA Length = 699 Score = 145 bits (73), Expect = 2e-31 Identities = 160/189 (84%) Strand = Plus / Minus Query: 266 ctctttctttgcaagtccagcctgcactagaaatgtagcaacattcttacgctgatcacc 325 ||||||||| ||| ||||||||| || |||||||||| ||| ||||| ||||| ||| | Sbjct: 463 ctctttcttcacaattccagcctggacaagaaatgtagaaacgttcttccgctggtcatc 404 Query: 326 ttggagttggatgacctggcctagttctggatcctggactacagtaccattacagcagaa 385 || ||||| || |||||||||||||| |||||||| || ||||||||||| |||||||| Sbjct: 403 ctgaagttgaataacctggcctagttcaggatcctgaacgacagtaccattgcagcagaa 344 Query: 386 ttcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaagccctgaac 445 || || ||||||||||| || |||||||| ||||| | ||||||||||| ||||| || Sbjct: 343 ctctttcttgagatccttcagtatcttgttatagctaaattctttcttcaacccctgcac 284 Query: 446 agttgtcag 454 ||||||||| Sbjct: 283 agttgtcag 275
>gb|BT013323.1| Lycopersicon esculentum clone 135043R, mRNA sequence Length = 787 Score = 139 bits (70), Expect = 1e-29 Identities = 148/174 (85%) Strand = Plus / Minus Query: 281 tccagcctgcactagaaatgtagcaacattcttacgctgatcaccttggagttggatgac 340 ||||||||| || |||||||||| ||| ||||| | ||||||||| |||||||| || || Sbjct: 472 tccagcctggacaagaaatgtagaaacgttctttctctgatcaccctggagttgaataac 413 Query: 341 ctggcctagttctggatcctggactacagtaccattacagcagaattcctttttgagatc 400 |||||||||||||||||||||||| ||||||||||| ||||| || || || || || || Sbjct: 412 ctggcctagttctggatcctggacaacagtaccattgcagcaaaactctttcttaaggtc 353 Query: 401 cttgagaatcttgttgtagctgtagtctttcttcaagccctgaacagttgtcag 454 ||| || || || ||||||||| | ||||||||||| || || ||||||||||| Sbjct: 352 ctttagtattttattgtagctgaattctttcttcaatccttgcacagttgtcag 299
>dbj|AB003378.1| Salix bakko mRNA for SUI1 homolog, complete cds Length = 700 Score = 135 bits (68), Expect = 2e-28 Identities = 168/200 (84%), Gaps = 1/200 (0%) Strand = Plus / Minus Query: 318 tgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatta 377 |||||||| || ||||| |||||||| |||| || ||||||||||| ||||| ||||| Sbjct: 404 tgatcaccctgtagttgaatgacctgccctaactcaggatcctggacaacagttccattg 345 Query: 378 cagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaag 437 |||||||| || || ||||| ||||| || |||||||||||||| ||||| |||||||| Sbjct: 344 cagcagaactctttcttgaggtccttaagtatcttgttgtagctatagtccttcttcaat 285 Query: 438 ccctgaacagttgtcagactctttcttccgttgcgctgctggacacgcacatgcacatag 497 || |||||||| ||||| || || ||||| || |||||||| ||||||||||| ||||| Sbjct: 284 ccttgaacagtagtcaggcttttccttccattacgctgctgtacacgcacatgaacata- 226 Query: 498 ttcttttgatccagcaccag 517 ||||||| |||||||||| Sbjct: 225 atcttttgtcccagcaccag 206
>emb|AJ309088.1|PPI309088 Pinus pinaster partial mRNA for putative translation factor Length = 635 Score = 133 bits (67), Expect = 6e-28 Identities = 176/211 (83%), Gaps = 1/211 (0%) Strand = Plus / Minus Query: 305 aacattcttacgctgatcaccttggagttggatgacctggcctagttctggatcctggac 364 |||||| ||||| |||||||| || || || || ||||| || ||||| |||||||| || Sbjct: 473 aacatttttacgttgatcaccctgtagctgaatcacctgcccaagttcaggatcctgcac 414 Query: 365 tacagtaccattacagcagaattcctttttgagatccttgagaatcttgttgtagctgta 424 ||||| |||||||| || ||||| |||||||| || |||||||| ||||||||||| | Sbjct: 413 aacagtcccattacaacaaaattcttttttgaggtctttgagaattttgttgtagctaaa 354 Query: 425 gtctttcttcaagccctgaacagttgtcagactctttcttccgttgcgctgctggacacg 484 || ||| | || || || |||||||||||||||||||| |||||||||||||| | || Sbjct: 353 ttccttccttaaaccttgcacagttgtcagactctttctaccgttgcgctgctgtatgcg 294 Query: 485 cacatgcacatagttcttttgatccagcacc 515 |||||||||||| |||||| ||||| ||||| Sbjct: 293 cacatgcacata-ttctttagatccggcacc 264
>emb|AJ242801.1|SST242801 Sporobolus stapfianus partial mRNA for putative translation initiation factor eIF-1 Length = 796 Score = 125 bits (63), Expect = 2e-25 Identities = 156/187 (83%) Strand = Plus / Minus Query: 317 ctgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatt 376 ||||||||| || ||||| |||||||| || || ||||| |||||||| || |||||||| Sbjct: 440 ctgatcaccctgaagttgaatgacctgtccaagctctgggtcctggacaactgtaccatt 381 Query: 377 acagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaa 436 |||||||| ||||| ||||| || || || ||||||||||||||| | || |||||||| Sbjct: 380 gcagcagaactccttcttgaggtctttcaggatcttgttgtagctgaattccttcttcaa 321 Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctggacacgcacatgcacata 496 ||||||||||| ||||||||||| | || || |||||||||| |||||||| || || Sbjct: 320 accctgaacagtcgtcagactcttgcgaccattacgctgctggatgcgcacatgaacgta 261 Query: 497 gttcttt 503 || |||| Sbjct: 260 gtccttt 254
>emb|AJ519839.1|CAR519839 Coffea arabica mRNA for SUI1 protein Length = 678 Score = 123 bits (62), Expect = 6e-25 Identities = 128/150 (85%) Strand = Plus / Minus Query: 305 aacattcttacgctgatcaccttggagttggatgacctggcctagttctggatcctggac 364 |||||||||||||||||| ||||||||||| |||||||||||||||||||| || ||||| Sbjct: 413 aacattcttacgctgatccccttggagttgaatgacctggcctagttctgggtcttggac 354 Query: 365 tacagtaccattacagcagaattcctttttgagatccttgagaatcttgttgtagctgta 424 ||||||||||| ||||| || || || ||||| ||||| || || || ||||| ||| | Sbjct: 353 aacagtaccattgcagcaaaactctttcttgaggtccttcaggattttattgtaactgaa 294 Query: 425 gtctttcttcaagccctgaacagttgtcag 454 ||||||||||| || || ||||| ||||| Sbjct: 293 ctctttcttcaacccttgcacagtagtcag 264
>emb|AJ249397.1|PPR249397 Phleum pratense mRNA for putative protein translation factor SUI (SUI1 gene), partial Length = 560 Score = 121 bits (61), Expect = 2e-24 Identities = 161/193 (83%), Gaps = 1/193 (0%) Strand = Plus / Minus Query: 317 ctgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatt 376 ||||||||| |||||||| ||||||||||| || ||||| |||||||| || |||||||| Sbjct: 213 ctgatcaccctggagttgaatgacctggccaagctctgggtcctggacaactgtaccatt 154 Query: 377 acagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaa 436 ||||| || || || |||||||| ||||| ||||| |||||||| | || |||||||| Sbjct: 153 gcagcaaaactctttcttgagatctttgaggatcttactgtagctgaattccttcttcaa 94 Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctggacacgcacatgcacata 496 |||||| ||||| ||||||||||| | || || |||||||||| || ||||| || || Sbjct: 93 gccctggacagtagtcagactcttgcggccattacgctgctggatgcgtacatggacgta 34 Query: 497 gttcttttgatcc 509 | ||||||||||| Sbjct: 33 g-tcttttgatcc 22
>ref|XM_478516.1| Oryza sativa (japonica cultivar-group), mRNA Length = 348 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Minus Query: 317 ctgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatt 376 ||||||||| || ||||| ||||||||||| || ||||| |||||||| ||||||||||| Sbjct: 273 ctgatcaccctgaagttgaatgacctggccaagctctgggtcctggacaacagtaccatt 214 Query: 377 acagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaa 436 ||||| || || || |||||||| ||||| ||||||||||||||| | || |||||||| Sbjct: 213 gcagcaaaactctttcttgagatctttgaggatcttgttgtagctgaattccttcttcaa 154 Query: 437 gccctgaacagttgtcagactctt 460 ||||| ||||| ||||| ||||| Sbjct: 153 tccctggacagtggtcaggctctt 130
>gb|AF380357.1|AF380357 Porteresia coarctata translational initiation factor eIF1 mRNA, complete cds Length = 773 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Minus Query: 317 ctgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatt 376 ||||||||| || ||||| ||||||||||| || ||||| |||||||| ||||||||||| Sbjct: 428 ctgatcaccctgaagttgaatgacctggccaagctctgggtcctggacaacagtaccatt 369 Query: 377 acagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaa 436 ||||| || || || |||||||| ||||| ||||||||||||||| | || |||||||| Sbjct: 368 gcagcaaaactctttcttgagatctttgaggatcttgttgtagctgaattccttcttcaa 309 Query: 437 gccctgaacagttgtcagactctt 460 ||||| ||||| ||||| ||||| Sbjct: 308 tccctggacagtggtcaggctctt 285
>dbj|AK120697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170I05, full insert sequence Length = 752 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Minus Query: 317 ctgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatt 376 ||||||||| || ||||| ||||||||||| || ||||| |||||||| ||||||||||| Sbjct: 451 ctgatcaccctgaagttgaatgacctggccaagctctgggtcctggacaacagtaccatt 392 Query: 377 acagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaa 436 ||||| || || || |||||||| ||||| ||||||||||||||| | || |||||||| Sbjct: 391 gcagcaaaactctttcttgagatctttgaggatcttgttgtagctgaattccttcttcaa 332 Query: 437 gccctgaacagttgtcagactctt 460 ||||| ||||| ||||| ||||| Sbjct: 331 tccctggacagtggtcaggctctt 308
>dbj|AK105037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C07, full insert sequence Length = 1275 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Minus Query: 317 ctgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatt 376 ||||||||| || ||||| ||||||||||| || ||||| |||||||| ||||||||||| Sbjct: 974 ctgatcaccctgaagttgaatgacctggccaagctctgggtcctggacaacagtaccatt 915 Query: 377 acagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaa 436 ||||| || || || |||||||| ||||| ||||||||||||||| | || |||||||| Sbjct: 914 gcagcaaaactctttcttgagatctttgaggatcttgttgtagctgaattccttcttcaa 855 Query: 437 gccctgaacagttgtcagactctt 460 ||||| ||||| ||||| ||||| Sbjct: 854 tccctggacagtggtcaggctctt 831
>gb|AF094774.1|AF094774 Oryza sativa translation initiation factor (GOS2) mRNA, complete cds Length = 744 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Minus Query: 317 ctgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatt 376 ||||||||| || ||||| ||||||||||| || ||||| |||||||| ||||||||||| Sbjct: 431 ctgatcaccctgaagttgaatgacctggccaagctctgggtcctggacaacagtaccatt 372 Query: 377 acagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaa 436 ||||| || || || |||||||| ||||| ||||||||||||||| | || |||||||| Sbjct: 371 gcagcaaaactctttcttgagatctttgaggatcttgttgtagctgaattccttcttcaa 312 Query: 437 gccctgaacagttgtcagactctt 460 ||||| ||||| ||||| ||||| Sbjct: 311 tccctggacagtggtcaggctctt 288
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 99.6 bits (50), Expect = 9e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 339 acctggcctagttctggatcctggactacagtaccattacagcagaattcctttttgaga 398 |||||||| || ||||| |||||||| ||||||||||| ||||| || || || |||||| Sbjct: 20680177 acctggccaagctctgggtcctggacaacagtaccattgcagcaaaactctttcttgaga 20680236 Query: 399 tccttgagaatcttgttgtagctgtagtctttcttcaagccctgaacagttgtcagactc 458 || ||||| ||||||||||||||| | || |||||||| ||||| ||||| ||||| ||| Sbjct: 20680237 tctttgaggatcttgttgtagctgaattccttcttcaatccctggacagtggtcaggctc 20680296 Query: 459 tt 460 || Sbjct: 20680297 tt 20680298 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 345 cctagttctggatcctggactacagtaccattacagcagaattcctttttgagatccttg 404 ||||| |||| ||| ||||| |||||| ||||||||| |||||||||| ||||||| | Sbjct: 10476167 cctagctctgaatcatggaccacagtaacattacagccaaattccttttctagatcctag 10476108 Query: 405 agaatcttgttgtagctgtagtctttcttcaagccctgaacagttgtcagactctttctt 464 | || ||||| | |||||| ||| |||||||||| |||||| | |||| || |||||| Sbjct: 10476107 aatattttgttctggctgtattctctcttcaagccttgaacaataatcagtctttttctt 10476048 Query: 465 ccgttg 470 |||||| Sbjct: 10476047 ccgttg 10476042
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 99.6 bits (50), Expect = 9e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 339 acctggcctagttctggatcctggactacagtaccattacagcagaattcctttttgaga 398 |||||||| || ||||| |||||||| ||||||||||| ||||| || || || |||||| Sbjct: 32927 acctggccaagctctgggtcctggacaacagtaccattgcagcaaaactctttcttgaga 32986 Query: 399 tccttgagaatcttgttgtagctgtagtctttcttcaagccctgaacagttgtcagactc 458 || ||||| ||||||||||||||| | || |||||||| ||||| ||||| ||||| ||| Sbjct: 32987 tctttgaggatcttgttgtagctgaattccttcttcaatccctggacagtggtcaggctc 33046 Query: 459 tt 460 || Sbjct: 33047 tt 33048
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 339 acctggcctagttctggatcctggactacagtaccattacagcagaattcctttttgaga 398 |||||||| || |||||||| |||| |||||||||||| ||||||||||||||||| ||| Sbjct: 2840953 acctggccaagctctggatcttggagtacagtaccattgcagcagaattcctttttcaga 2841012 Query: 399 tccttgagaatcttgttgta 418 || ||||| ||||||||||| Sbjct: 2841013 tcattgaggatcttgttgta 2841032
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 339 acctggcctagttctggatcctggactacagtaccattacagcagaattcctttttgaga 398 |||||||| || |||||||| |||| |||||||||||| ||||||||||||||||| ||| Sbjct: 109181 acctggccaagctctggatcttggagtacagtaccattgcagcagaattcctttttcaga 109240 Query: 399 tccttgagaatcttgttgta 418 || ||||| ||||||||||| Sbjct: 109241 tcattgaggatcttgttgta 109260
>emb|X51910.1|OSGOS2G O.sativa (rice) constitutive GOS2 gene Length = 3192 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Minus Query: 339 acctggcctagttctggatcctggactacagtaccattacagcagaattcctttttgaga 398 |||||||| || ||||| |||||||| ||||||||||| ||||| || || || |||||| Sbjct: 2535 acctggccaagctctgggtcctggacaacagtaccattgcagcaaaactctttcttgaga 2476 Query: 399 tccttgagaatcttgttgtagctgtagtctttcttcaagccctgaacagttgtcagactc 458 || || || ||||||||||||||| | || |||||||| ||||| ||||| ||||| ||| Sbjct: 2475 tctttaaggatcttgttgtagctgaattccttcttcaatccctggacagtggtcaggctc 2416 Query: 459 tt 460 || Sbjct: 2415 tt 2414
>ref|NM_124857.2| Arabidopsis thaliana translation initiation factor AT5G54760 mRNA, complete cds Length = 706 Score = 79.8 bits (40), Expect = 8e-12 Identities = 142/176 (80%) Strand = Plus / Minus Query: 309 ttcttacgctgatcaccttggagttggatgacctggcctagttctggatcctggactaca 368 |||||||| || |||||||| || || || ||||| || ||||||| |||||| || ||| Sbjct: 421 ttcttacgttggtcaccttgaagctgtataacctgtccgagttctgaatcctgaaccaca 362 Query: 369 gtaccattacagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtct 428 || || || ||||| || || || ||||| ||||| || |||||| | |||||||| ||| Sbjct: 361 gtgccgttgcagcaaaactctttcttgaggtccttaagtatcttggtatagctgtactct 302 Query: 429 ttcttcaagccctgaacagttgtcagactctttcttccgttgcgctgctggacacg 484 ||||||| |||||| || ||||||| || || || || || |||||||||||||| Sbjct: 301 ttcttcaggccctggacggttgtcaagcttttcctaccatttcgctgctggacacg 246
>gb|AC146555.5| Medicago truncatula clone mth2-10p14, complete sequence Length = 127640 Score = 79.8 bits (40), Expect = 8e-12 Identities = 106/128 (82%) Strand = Plus / Minus Query: 351 tctggatcctggactacagtaccattacagcagaattcctttttgagatccttgagaatc 410 ||||| |||||||| || ||||||||||| || || ||||| || || || || |||||| Sbjct: 53683 tctgggtcctggacaactgtaccattacaacaaaactccttcttaaggtctttcagaatc 53624 Query: 411 ttgttgtagctgtagtctttcttcaagccctgaacagttgtcagactctttcttccgttg 470 |||||||| ||| | ||||||||||| ||||| |||||||||| || ||||| || || Sbjct: 53623 ttgttgtaactgaattctttcttcaatccctggacagttgtcaagctttttctaccattt 53564 Query: 471 cgctgctg 478 |||||||| Sbjct: 53563 cgctgctg 53556
>gb|BT005836.1| Arabidopsis thaliana At5g54760 gene, complete cds Length = 342 Score = 79.8 bits (40), Expect = 8e-12 Identities = 142/176 (80%) Strand = Plus / Minus Query: 309 ttcttacgctgatcaccttggagttggatgacctggcctagttctggatcctggactaca 368 |||||||| || |||||||| || || || ||||| || ||||||| |||||| || ||| Sbjct: 275 ttcttacgttggtcaccttgaagctgtataacctgtccgagttctgaatcctgaaccaca 216 Query: 369 gtaccattacagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtct 428 || || || ||||| || || || ||||| ||||| || |||||| | |||||||| ||| Sbjct: 215 gtgccgttgcagcaaaactctttcttgaggtccttaagtatcttggtatagctgtactct 156 Query: 429 ttcttcaagccctgaacagttgtcagactctttcttccgttgcgctgctggacacg 484 ||||||| |||||| || ||||||| || || || || || |||||||||||||| Sbjct: 155 ttcttcaggccctggacggttgtcaagcttttcctaccatttcgctgctggacacg 100
>ref|NM_118847.2| Arabidopsis thaliana translation initiation factor AT4G27130 mRNA, complete cds Length = 811 Score = 67.9 bits (34), Expect = 3e-08 Identities = 172/218 (78%) Strand = Plus / Minus Query: 267 tctttctttgcaagtccagcctgcactagaaatgtagcaacattcttacgctgatcacct 326 |||||||| |||| |||||||| ||||| || || | || ||||| | |||||| ||| Sbjct: 567 tctttcttcacaagcccagcctggactaggaacgtggagacgttcttcctctgatcgcct 508 Query: 327 tggagttggatgacctggcctagttctggatcctggactacagtaccattacagcagaat 386 || || || || ||||| || ||||||| || || || ||||| || || ||||| ||| Sbjct: 507 tgaagctgaataacctgtccgagttctgagtcttgaaccacagttccgttgcagcaaaat 448 Query: 387 tcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaagccctgaaca 446 || || ||||| ||||| || |||||| |||||||||| |||||||||| ||||| || Sbjct: 447 tctttcttgaggtccttaagtatcttggtgtagctgtactctttcttcagcccctggacc 388 Query: 447 gttgtcagactctttcttccgttgcgctgctggacacg 484 ||||||| || || || || || |||||||||||||| Sbjct: 387 gttgtcaagcttttcctaccattccgctgctggacacg 350
>gb|AY060537.1| Arabidopsis thaliana AT4g27130/T24A18_80 mRNA, complete cds Length = 342 Score = 67.9 bits (34), Expect = 3e-08 Identities = 172/218 (78%) Strand = Plus / Minus Query: 267 tctttctttgcaagtccagcctgcactagaaatgtagcaacattcttacgctgatcacct 326 |||||||| |||| |||||||| ||||| || || | || ||||| | |||||| ||| Sbjct: 317 tctttcttcacaagcccagcctggactaggaacgtggagacgttcttcctctgatcgcct 258 Query: 327 tggagttggatgacctggcctagttctggatcctggactacagtaccattacagcagaat 386 || || || || ||||| || ||||||| || || || ||||| || || ||||| ||| Sbjct: 257 tgaagctgaataacctgtccgagttctgagtcttgaaccacagttccgttgcagcaaaat 198 Query: 387 tcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaagccctgaaca 446 || || ||||| ||||| || |||||| |||||||||| |||||||||| ||||| || Sbjct: 197 tctttcttgaggtccttaagtatcttggtgtagctgtactctttcttcagcccctggacc 138 Query: 447 gttgtcagactctttcttccgttgcgctgctggacacg 484 ||||||| || || || || || |||||||||||||| Sbjct: 137 gttgtcaagcttttcctaccattccgctgctggacacg 100
>gb|AY037234.1| Arabidopsis thaliana AT4g27130/T24A18_80 mRNA, complete cds Length = 737 Score = 67.9 bits (34), Expect = 3e-08 Identities = 172/218 (78%) Strand = Plus / Minus Query: 267 tctttctttgcaagtccagcctgcactagaaatgtagcaacattcttacgctgatcacct 326 |||||||| |||| |||||||| ||||| || || | || ||||| | |||||| ||| Sbjct: 519 tctttcttcacaagcccagcctggactaggaacgtggagacgttcttcctctgatcgcct 460 Query: 327 tggagttggatgacctggcctagttctggatcctggactacagtaccattacagcagaat 386 || || || || ||||| || ||||||| || || || ||||| || || ||||| ||| Sbjct: 459 tgaagctgaataacctgtccgagttctgagtcttgaaccacagttccgttgcagcaaaat 400 Query: 387 tcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaagccctgaaca 446 || || ||||| ||||| || |||||| |||||||||| |||||||||| ||||| || Sbjct: 399 tctttcttgaggtccttaagtatcttggtgtagctgtactctttcttcagcccctggacc 340 Query: 447 gttgtcagactctttcttccgttgcgctgctggacacg 484 ||||||| || || || || || |||||||||||||| Sbjct: 339 gttgtcaagcttttcctaccattccgctgctggacacg 302
>emb|BX828314.1|CNS0A3U9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZH04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 738 Score = 67.9 bits (34), Expect = 3e-08 Identities = 172/218 (78%) Strand = Plus / Minus Query: 267 tctttctttgcaagtccagcctgcactagaaatgtagcaacattcttacgctgatcacct 326 |||||||| |||| |||||||| ||||| || || | || ||||| | |||||| ||| Sbjct: 496 tctttcttcacaagcccagcctggactaggaacgtggagacgttcttcctctgatcgcct 437 Query: 327 tggagttggatgacctggcctagttctggatcctggactacagtaccattacagcagaat 386 || || || || ||||| || ||||||| || || || ||||| || || ||||| ||| Sbjct: 436 tgaagctgaataacctgtccgagttctgagtcttgaaccacagttccgttgcagcaaaat 377 Query: 387 tcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaagccctgaaca 446 || || ||||| ||||| || |||||| |||||||||| |||||||||| ||||| || Sbjct: 376 tctttcttgaggtccttaagtatcttggtgtagctgtactctttcttcagcccctggacc 317 Query: 447 gttgtcagactctttcttccgttgcgctgctggacacg 484 ||||||| || || || || || |||||||||||||| Sbjct: 316 gttgtcaagcttttcctaccattccgctgctggacacg 279
>gb|AY088288.1| Arabidopsis thaliana clone 5206 mRNA, complete sequence Length = 805 Score = 67.9 bits (34), Expect = 3e-08 Identities = 172/218 (78%) Strand = Plus / Minus Query: 267 tctttctttgcaagtccagcctgcactagaaatgtagcaacattcttacgctgatcacct 326 |||||||| |||| |||||||| ||||| || || | || ||||| | |||||| ||| Sbjct: 567 tctttcttcacaagcccagcctggactaggaacgtggagacgttcttcctctgatcgcct 508 Query: 327 tggagttggatgacctggcctagttctggatcctggactacagtaccattacagcagaat 386 || || || || ||||| || ||||||| || || || ||||| || || ||||| ||| Sbjct: 507 tgaagctgaataacctgtccgagttctgagtcttgaaccacagttccgttgcagcaaaat 448 Query: 387 tcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaagccctgaaca 446 || || ||||| ||||| || |||||| |||||||||| |||||||||| ||||| || Sbjct: 447 tctttcttgaggtccttaagtatcttggtgtagctgtactctttcttcagcccctggacc 388 Query: 447 gttgtcagactctttcttccgttgcgctgctggacacg 484 ||||||| || || || || || |||||||||||||| Sbjct: 387 gttgtcaagcttttcctaccattccgctgctggacacg 350
>dbj|AP005104.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0042E08 Length = 166257 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 345 cctagttctggatcctggactacagtaccattacagcagaattcctttttgagatccttg 404 ||||| |||| ||| ||||| |||||| ||||||||| |||||||||| ||||||| | Sbjct: 27496 cctagctctgaatcatggaccacagtaacattacagccaaattccttttctagatcctag 27437 Query: 405 agaatcttgttgtagctgtagtctttcttcaagccctgaacagttgtcagactctttctt 464 | || ||||| | |||||| ||| |||||||||| |||||| | |||| || |||||| Sbjct: 27436 aatattttgttctggctgtattctctcttcaagccttgaacaataatcagtctttttctt 27377 Query: 465 ccgttg 470 |||||| Sbjct: 27376 ccgttg 27371
>dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBG8 Length = 80315 Score = 67.9 bits (34), Expect = 3e-08 Identities = 118/146 (80%) Strand = Plus / Minus Query: 339 acctggcctagttctggatcctggactacagtaccattacagcagaattcctttttgaga 398 ||||| || ||||||| |||||| || ||||| || || ||||| || || || ||||| Sbjct: 4167 acctgtccgagttctgaatcctgaaccacagtgccgttgcagcaaaactctttcttgagg 4108 Query: 399 tccttgagaatcttgttgtagctgtagtctttcttcaagccctgaacagttgtcagactc 458 ||||| || |||||| | |||||||| |||||||||| |||||| || ||||||| || Sbjct: 4107 tccttaagtatcttggtatagctgtactctttcttcaggccctggacggttgtcaagctt 4048 Query: 459 tttcttccgttgcgctgctggacacg 484 || || || || |||||||||||||| Sbjct: 4047 ttcctaccatttcgctgctggacacg 4022 Score = 58.0 bits (29), Expect = 3e-05 Identities = 112/137 (81%), Gaps = 2/137 (1%) Strand = Plus / Plus Query: 318 tgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatta 377 ||||||||||| || ||||||| || |||||||||| ||||| || || |||| || Sbjct: 67499 tgatcaccttgaagctggatgatcttgcctagttctttgtcctgcacaacgttaccgttg 67558 Query: 378 cagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaag 437 |||||||| || || || | ||||||||||||| | | ||||||||| |||||||| ||| Sbjct: 67559 cagcagaaatctttcttcaaatccttgagaatcctctcgtagctgtactctttctt-aag 67617 Query: 438 ccc-tgaacagttgtca 453 ||| |||||||| |||| Sbjct: 67618 cccttgaacagtcgtca 67634
>dbj|AK101048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033009H10, full insert sequence Length = 2452 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 345 cctagttctggatcctggactacagtaccattacagcagaattcctttttgagatccttg 404 ||||| |||| ||| ||||| |||||| ||||||||| |||||||||| ||||||| | Sbjct: 2254 cctagctctgaatcatggaccacagtaacattacagccaaattccttttctagatcctag 2195 Query: 405 agaatcttgttgtagctgtagtctttcttcaagccctgaacagttgtcagactctttctt 464 | || ||||| | |||||| ||| |||||||||| |||||| | |||| || |||||| Sbjct: 2194 aatattttgttctggctgtattctctcttcaagccttgaacaataatcagtctttttctt 2135 Query: 465 ccgttg 470 |||||| Sbjct: 2134 ccgttg 2129
>dbj|AK067031.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091L18, full insert sequence Length = 2921 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Minus Query: 345 cctagttctggatcctggactacagtaccattacagcagaattcctttttgagatccttg 404 ||||| |||| ||| ||||| |||||| ||||||||| |||||||||| ||||||| | Sbjct: 2784 cctagctctgaatcatggaccacagtaacattacagccaaattccttttctagatcctag 2725 Query: 405 agaatcttgttgtagctgtagtctttcttcaagccctgaacagttgtcagactctttctt 464 | || ||||| | |||||| ||| |||||||||| |||||| | |||| || |||||| Sbjct: 2724 aatattttgttctggctgtattctctcttcaagccttgaacaataatcagtctttttctt 2665 Query: 465 ccgttg 470 |||||| Sbjct: 2664 ccgttg 2659
>emb|AJ519840.1|CAR519840 Coffea arabica sui1 gene, exons 1-5 Length = 2677 Score = 65.9 bits (33), Expect = 1e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 338 gacctggcctagttctggatcctggactacagtaccattacagcagaattcctttttgag 397 |||||||||||||||||| || ||||| ||||||||||| ||||| || || || ||||| Sbjct: 2127 gacctggcctagttctgggtcttggacaacagtaccattgcagcaaaactctttcttgag 2068 Query: 398 atccttgagaatcttgttgtagctgtagtctttcttcaagccctgaacagttgtcag 454 ||||| || || || ||||| ||| | ||||| ||||| || || ||||| ||||| Sbjct: 2067 gtccttcaggattttattgtaactgaactctttgttcaacccttgcacagtagtcag 2011 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 305 aacattcttacgctgatcaccttggagttggatgacct 342 |||||||||||||||||| ||||||||||| ||||||| Sbjct: 2246 aacattcttacgctgatccccttggagttgaatgacct 2209
>gb|AF098672.1|AF098672 Brassica oleracea translation initiation factor nps45 mRNA, complete cds Length = 560 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 393 ttgagatccttgagaatcttgttgtagctgtagtctttcttcaagccctgaacagttgtc 452 ||||||||||| || |||||| |||||||||| |||||||||| ||||| ||||||||| Sbjct: 218 ttgagatccttaagtatcttggtgtagctgtactctttcttcagcccctggacagttgtc 159 Query: 453 a 453 | Sbjct: 158 a 158
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 378 cagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaag 437 ||||| ||||| || ||||| ||||| || |||||| |||||||||| |||||||||| Sbjct: 109009 cagcaaaattctttcttgaggtccttaagtatcttggtgtagctgtactctttcttcagc 109068 Query: 438 ccctgaacagttgtcagactctttcttccgttgcgctgctggacacg 484 ||||| || ||||||| || || || || || |||||||||||||| Sbjct: 109069 ccctggaccgttgtcaagcttttcctaccattccgctgctggacacg 109115
>emb|AL035680.1|ATT24A18 Arabidopsis thaliana DNA chromosome 4, BAC clone T24A18, partial sequence (ESSA project) Length = 45980 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 378 cagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaag 437 ||||| ||||| || ||||| ||||| || |||||| |||||||||| |||||||||| Sbjct: 25498 cagcaaaattctttcttgaggtccttaagtatcttggtgtagctgtactctttcttcagc 25557 Query: 438 ccctgaacagttgtcagactctttcttccgttgcgctgctggacacg 484 ||||| || ||||||| || || || || || |||||||||||||| Sbjct: 25558 ccctggaccgttgtcaagcttttcctaccattccgctgctggacacg 25604
>gb|AF521961.1| Helianthus annuus translation initiation factor B04 mRNA, complete cds Length = 621 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 356 atcctggactacagtaccattacagcagaattcctttttgagatccttgagaatcttgtt 415 |||||| || ||||| ||||||||||||||||| || |||||||| |||||||| || | Sbjct: 318 atcctgcacaacagtgccattacagcagaattctttcttgagatctttgagaattttatc 259 Query: 416 gtagctg 422 ||||||| Sbjct: 258 gtagctg 252
>gb|U81042.1|ATU81042 Arabidopsis thaliana translation initiation factor gene, complete cds Length = 1787 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 378 cagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaag 437 ||||| ||||| || ||||| ||||| || |||||| |||||||||| |||||||||| Sbjct: 1259 cagcaaaattctttcttgaggtccttaagtatcttggtgtagctgtactctttcttcagc 1200 Query: 438 ccctgaacagttgtcagactctttcttccgttgcgctgctggacacg 484 ||||| || ||||||| || || || || || |||||||||||||| Sbjct: 1199 ccctggaccgttgtcaagcttttcctaccattccgctgctggacacg 1153
>emb|BX828730.1|CNS0A3GG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZF02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 735 Score = 60.0 bits (30), Expect = 8e-06 Identities = 171/218 (78%) Strand = Plus / Minus Query: 267 tctttctttgcaagtccagcctgcactagaaatgtagcaacattcttacgctgatcacct 326 |||||||| |||| |||||||| ||||| || || | || ||||| | |||||| ||| Sbjct: 497 tctttcttcacaagcccagcctggactaggaacgtggagacgttcttcctctgatcgcct 438 Query: 327 tggagttggatgacctggcctagttctggatcctggactacagtaccattacagcagaat 386 || || || || ||||| || ||||||| || || || ||||| || || ||||| ||| Sbjct: 437 tgaagctgaataacctgtccgagttctgagtcttgaaccacagttccgttgcagcaaaat 378 Query: 387 tcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaagccctgaaca 446 || || ||||| ||||| || |||||| |||||||||| |||||||||| ||||| || Sbjct: 377 tctttcttgaggtccttaagtatcttggtgtagctgtactctttcttcagcccctggacc 318 Query: 447 gttgtcagactctttcttccgttgcgctgctggacacg 484 ||||| | || || || || || |||||||||||||| Sbjct: 317 gttgtaaagcttttcctaccattccgctgctggacacg 280
>gb|AY617076.1| Bassia scoparia putative translation initiation factor mRNA, partial cds Length = 207 Score = 60.0 bits (30), Expect = 8e-06 Identities = 117/146 (80%) Strand = Plus / Minus Query: 303 gcaacattcttacgctgatcaccttggagttggatgacctggcctagttctggatcctgg 362 ||||| |||||||||||||| ||||| |||||||| |||| ||||| || ||||| Sbjct: 146 gcaaccttcttacgctgatcgccttgcagttggataaccttccctagctccttgtcctgt 87 Query: 363 actacagtaccattacagcagaattcctttttgagatccttgagaatcttgttgtagctg 422 || ||| | || || |||||||| ||||||||||| || ||||| ||||| | ||||||| Sbjct: 86 acaacattgccgttgcagcagaactcctttttgaggtctttgagtatcttctcgtagctg 27 Query: 423 tagtctttcttcaagccctgaacagt 448 | || ||||||| || |||||||| Sbjct: 26 aaatccttcttcagaccttgaacagt 1
>ref|NM_180861.1| Arabidopsis thaliana translation initiation factor AT5G54940 transcript variant AT5G54940.1 mRNA, complete cds Length = 617 Score = 58.0 bits (29), Expect = 3e-05 Identities = 112/137 (81%), Gaps = 2/137 (1%) Strand = Plus / Minus Query: 318 tgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatta 377 ||||||||||| || ||||||| || |||||||||| ||||| || || |||| || Sbjct: 433 tgatcaccttgaagctggatgatcttgcctagttctttgtcctgcacaacgttaccgttg 374 Query: 378 cagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaag 437 |||||||| || || || | ||||||||||||| | | ||||||||| |||||||| ||| Sbjct: 373 cagcagaaatctttcttcaaatccttgagaatcctctcgtagctgtactctttctt-aag 315 Query: 438 ccc-tgaacagttgtca 453 ||| |||||||| |||| Sbjct: 314 cccttgaacagtcgtca 298
>ref|NM_124876.3| Arabidopsis thaliana translation initiation factor AT5G54940 transcript variant AT5G54940.2 mRNA, complete cds Length = 592 Score = 58.0 bits (29), Expect = 3e-05 Identities = 112/137 (81%), Gaps = 2/137 (1%) Strand = Plus / Minus Query: 318 tgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatta 377 ||||||||||| || ||||||| || |||||||||| ||||| || || |||| || Sbjct: 367 tgatcaccttgaagctggatgatcttgcctagttctttgtcctgcacaacgttaccgttg 308 Query: 378 cagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaag 437 |||||||| || || || | ||||||||||||| | | ||||||||| |||||||| ||| Sbjct: 307 cagcagaaatctttcttcaaatccttgagaatcctctcgtagctgtactctttctt-aag 249 Query: 438 ccc-tgaacagttgtca 453 ||| |||||||| |||| Sbjct: 248 cccttgaacagtcgtca 232
>gb|AY133677.1| Arabidopsis thaliana AT5g54940/MBG8_21 mRNA, complete cds Length = 339 Score = 58.0 bits (29), Expect = 3e-05 Identities = 112/137 (81%), Gaps = 2/137 (1%) Strand = Plus / Minus Query: 318 tgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatta 377 ||||||||||| || ||||||| || |||||||||| ||||| || || |||| || Sbjct: 263 tgatcaccttgaagctggatgatcttgcctagttctttgtcctgcacaacgttaccgttg 204 Query: 378 cagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaag 437 |||||||| || || || | ||||||||||||| | | ||||||||| |||||||| ||| Sbjct: 203 cagcagaaatctttcttcaaatccttgagaatcctctcgtagctgtactctttctt-aag 145 Query: 438 ccc-tgaacagttgtca 453 ||| |||||||| |||| Sbjct: 144 cccttgaacagtcgtca 128
>gb|AF385736.1|AF385736 Arabidopsis thaliana AT5g54940/MBG8_21 mRNA, complete cds Length = 591 Score = 58.0 bits (29), Expect = 3e-05 Identities = 112/137 (81%), Gaps = 2/137 (1%) Strand = Plus / Minus Query: 318 tgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatta 377 ||||||||||| || ||||||| || |||||||||| ||||| || || |||| || Sbjct: 368 tgatcaccttgaagctggatgatcttgcctagttctttgtcctgcacaacgttaccgttg 309 Query: 378 cagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaag 437 |||||||| || || || | ||||||||||||| | | ||||||||| |||||||| ||| Sbjct: 308 cagcagaaatctttcttcaaatccttgagaatcctctcgtagctgtactctttctt-aag 250 Query: 438 ccc-tgaacagttgtca 453 ||| |||||||| |||| Sbjct: 249 cccttgaacagtcgtca 233
>emb|BX833097.1|CNS0A21C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL34ZB02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 545 Score = 58.0 bits (29), Expect = 3e-05 Identities = 112/137 (81%), Gaps = 2/137 (1%) Strand = Plus / Minus Query: 318 tgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatta 377 ||||||||||| || ||||||| || |||||||||| ||||| || || |||| || Sbjct: 319 tgatcaccttgaagctggatgatcttgcctagttctttgtcctgcacaacgttaccgttg 260 Query: 378 cagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaag 437 |||||||| || || || | ||||||||||||| | | ||||||||| |||||||| ||| Sbjct: 259 cagcagaaatctttcttcaaatccttgagaatcctctcgtagctgtactctttctt-aag 201 Query: 438 ccc-tgaacagttgtca 453 ||| |||||||| |||| Sbjct: 200 cccttgaacagtcgtca 184
>emb|BX831257.1|CNS0A0P2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS72ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 544 Score = 58.0 bits (29), Expect = 3e-05 Identities = 112/137 (81%), Gaps = 2/137 (1%) Strand = Plus / Minus Query: 318 tgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatta 377 ||||||||||| || ||||||| || |||||||||| ||||| || || |||| || Sbjct: 319 tgatcaccttgaagctggatgatcttgcctagttctttgtcctgcacaacgttaccgttg 260 Query: 378 cagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaag 437 |||||||| || || || | ||||||||||||| | | ||||||||| |||||||| ||| Sbjct: 259 cagcagaaatctttcttcaaatccttgagaatcctctcgtagctgtactctttctt-aag 201 Query: 438 ccc-tgaacagttgtca 453 ||| |||||||| |||| Sbjct: 200 cccttgaacagtcgtca 184
>gb|AY087132.1| Arabidopsis thaliana clone 32071 mRNA, complete sequence Length = 585 Score = 58.0 bits (29), Expect = 3e-05 Identities = 112/137 (81%), Gaps = 2/137 (1%) Strand = Plus / Minus Query: 318 tgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatta 377 ||||||||||| || ||||||| || |||||||||| ||||| || || |||| || Sbjct: 368 tgatcaccttgaagctggatgatcttgcctagttctttgtcctgcacaacgttaccgttg 309 Query: 378 cagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaag 437 |||||||| || || || | ||||||||||||| | | ||||||||| |||||||| ||| Sbjct: 308 cagcagaaatctttcttcaaatccttgagaatcctctcgtagctgtactctttctt-aag 250 Query: 438 ccc-tgaacagttgtca 453 ||| |||||||| |||| Sbjct: 249 cccttgaacagtcgtca 233
>ref|NM_104307.3| Arabidopsis thaliana translation initiation factor AT1G54290 mRNA, complete cds Length = 811 Score = 56.0 bits (28), Expect = 1e-04 Identities = 133/168 (79%) Strand = Plus / Minus Query: 317 ctgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatt 376 |||||||||||| || || || ||||| |||| ||| | |||||||| || || ||||| Sbjct: 511 ctgatcaccttgaagctgaataacctgtcctaattcagagtcctggacgacggtgccatt 452 Query: 377 acagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaa 436 ||||||||||| || || || || || || |||||| | ||||| || |||||||| | Sbjct: 451 gcagcagaattctttcttaaggtctttaagtatcttgctatagctatactctttcttaag 392 Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctggacacg 484 ||||| |||||||||| || ||||| || || |||||||| ||||| Sbjct: 391 cccctggacagttgtcaagctttttctaccattacgctgctgaacacg 344
>gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0014C03, complete sequence Length = 143739 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 339 acctggcctagttctggatcctggactacagtaccattacagcagaattcctttttgaga 398 ||||||||||| |||||||| | ||||||| || ||||||| | ||||||||||| ||| Sbjct: 118155 acctggcctagatctggatcttagactacaataacattacaaccgaattccttttccaga 118214 Query: 399 tcct 402 |||| Sbjct: 118215 tcct 118218 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 451 tcagactctttcttccgttgcgctgctggacacgcacatgcacatagttcttt 503 ||||| |||||||||||||| |||| || | ||||||||||||||| |||| Sbjct: 118256 tcagattctttcttccgttgtgctgttgaatgggcacatgcacatagtccttt 118308
>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21, complete sequence Length = 151267 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 339 acctggcctagttctggatcctggactacagtaccattacagcagaattcctttttgaga 398 ||||||||||| |||||||| | ||||||| || ||||||| | ||||||||||| ||| Sbjct: 27410 acctggcctagatctggatcttagactacaataacattacaaccgaattccttttccaga 27469 Query: 399 tcct 402 |||| Sbjct: 27470 tcct 27473 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 451 tcagactctttcttccgttgcgctgctggacacgcacatgcacatagttcttt 503 ||||| |||||||||||||| |||| || | ||||||||||||||| |||| Sbjct: 27511 tcagattctttcttccgttgtgctgttgaatgggcacatgcacatagtccttt 27563
>gb|BT000649.1| Arabidopsis thaliana putative protein translation factor Sui1 homolog (At1g54290/F20D21_53) mRNA, complete cds Length = 342 Score = 56.0 bits (28), Expect = 1e-04 Identities = 133/168 (79%) Strand = Plus / Minus Query: 317 ctgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatt 376 |||||||||||| || || || ||||| |||| ||| | |||||||| || || ||||| Sbjct: 267 ctgatcaccttgaagctgaataacctgtcctaattcagagtcctggacgacggtgccatt 208 Query: 377 acagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaa 436 ||||||||||| || || || || || || |||||| | ||||| || |||||||| | Sbjct: 207 gcagcagaattctttcttaaggtctttaagtatcttgctatagctatactctttcttaag 148 Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctggacacg 484 ||||| |||||||||| || ||||| || || |||||||| ||||| Sbjct: 147 cccctggacagttgtcaagctttttctaccattacgctgctgaacacg 100
>gb|DQ083224.1| Oryza sativa (indica cultivar-group) clone 5B11F72 mRNA sequence Length = 358 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 393 ttgagatccttgagaatcttgttgtagctgtagtctttcttcaagccctgaacagttgtc 452 |||||||| || || ||||||||||||||| | || |||||||| ||||| ||||| ||| Sbjct: 340 ttgagatctttaaggatcttgttgtagctgaattccttcttcaatccctggacagtggtc 281 Query: 453 agactctt 460 || ||||| Sbjct: 280 aggctctt 273
>gb|AF372910.1|AF372910 Arabidopsis thaliana At1g54290/F20D21_53 mRNA, complete cds Length = 742 Score = 56.0 bits (28), Expect = 1e-04 Identities = 133/168 (79%) Strand = Plus / Minus Query: 317 ctgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatt 376 |||||||||||| || || || ||||| |||| ||| | |||||||| || || ||||| Sbjct: 449 ctgatcaccttgaagctgaataacctgtcctaattcagagtcctggacgacggtgccatt 390 Query: 377 acagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaa 436 ||||||||||| || || || || || || |||||| | ||||| || |||||||| | Sbjct: 389 gcagcagaattctttcttaaggtctttaagtatcttgctatagctatactctttcttaag 330 Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctggacacg 484 ||||| |||||||||| || ||||| || || |||||||| ||||| Sbjct: 329 cccctggacagttgtcaagctttttctaccattacgctgctgaacacg 282
>emb|BX817291.1|CNS0ACKO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL12ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 748 Score = 56.0 bits (28), Expect = 1e-04 Identities = 133/168 (79%) Strand = Plus / Minus Query: 317 ctgatcaccttggagttggatgacctggcctagttctggatcctggactacagtaccatt 376 |||||||||||| || || || ||||| |||| ||| | |||||||| || || ||||| Sbjct: 448 ctgatcaccttgaagctgaataacctgtcctaattcagagtcctggacgacggtgccatt 389 Query: 377 acagcagaattcctttttgagatccttgagaatcttgttgtagctgtagtctttcttcaa 436 ||||||||||| || || || || || || |||||| | ||||| || |||||||| | Sbjct: 388 gcagcagaattctttcttaaggtctttaagtatcttgctatagctatactctttcttaag 329 Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctggacacg 484 ||||| |||||||||| || ||||| || || |||||||| ||||| Sbjct: 328 cccctggacagttgtcaagctttttctaccattacgctgctgaacacg 281
>gb|L41693.1|PS300016E Eucalyptus globulus bicostata symbiont (F00058) mRNA, ESTun016 Length = 256 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Minus Query: 357 tcctggactacagtaccattacagcagaattcctttttgagatccttgagaatcttgttg 416 ||||| |||||||| ||||| ||||| |||| || || || |||||||| |||||||| Sbjct: 252 tcctgaactacagttccattgcagcaaaattgtttcttcaggtccttgagtatcttgtta 193 Query: 417 tagctgtagtctttcttcaagccctgaacagttgtcagactctttcttccgttgcgctgc 476 |||||| | || ||||||| || || ||||| |||| || || || || ||||||||| Sbjct: 192 tagctgaactccttcttcagaccttgcacagtggtcaagcttttcctaccattgcgctgc 133 Query: 477 tggacacg 484 |||||||| Sbjct: 132 tggacacg 125
>gb|DQ083223.1| Oryza sativa (indica cultivar-group) clone 5B12A69 mRNA sequence Length = 209 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 317 ctgatcaccttggagttggatgacctggcctagttctggatcctggactacagt 370 ||||||||| || ||||| ||||||||||| || ||||| |||||||| ||||| Sbjct: 54 ctgatcaccctgaagttgaatgacctggccaagctctgggtcctggacaacagt 1
>gb|AC005287.4| Arabidopsis thaliana chromosome I BAC F20D21 genomic sequence, complete sequence Length = 143186 Score = 48.1 bits (24), Expect = 0.030 Identities = 102/128 (79%) Strand = Plus / Plus Query: 357 tcctggactacagtaccattacagcagaattcctttttgagatccttgagaatcttgttg 416 |||||||| || || ||||| ||||||||||| || || || || || || |||||| | Sbjct: 40514 tcctggacgacggtgccattgcagcagaattctttcttaaggtctttaagtatcttgcta 40573 Query: 417 tagctgtagtctttcttcaagccctgaacagttgtcagactctttcttccgttgcgctgc 476 ||||| || |||||||| | ||||| |||||||||| || ||||| || || |||||| Sbjct: 40574 tagctatactctttcttaagcccctggacagttgtcaagctttttctaccattacgctgc 40633 Query: 477 tggacacg 484 || ||||| Sbjct: 40634 tgaacacg 40641
>gb|AC157941.4| Mus musculus BAC clone RP24-253I2 from chromosome 3, complete sequence Length = 204323 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 490 gcacatagttcttttgatccagcac 514 ||||||| ||||||||||||||||| Sbjct: 113144 gcacatatttcttttgatccagcac 113120
>gb|AC150773.2| Xenopus tropicalis clone CH216-69F7, complete sequence Length = 115925 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 257 cttgatactctctttctttgcaagt 281 |||||| |||||||||||||||||| Sbjct: 74553 cttgattctctctttctttgcaagt 74577
>gb|AF091857.1|AF091857 Pimpinella brachycarpa protein translation factor SUI1 homolog mRNA, complete cds Length = 533 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Minus Query: 366 acagtaccattacagcagaattcctttttgagatccttgagaatcttgttgtagctg 422 |||||||||||||| || | |||| || || |||||||||||||||| ||||||| Sbjct: 265 acagtaccattacaacaaagcgccttcttaaggtccttgagaatcttgtcgtagctg 209
>gb|AC133170.2| Mus musculus BAC clone RP24-267K11 from 3, complete sequence Length = 158692 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 490 gcacatagttcttttgatccagcac 514 ||||||| ||||||||||||||||| Sbjct: 124058 gcacatatttcttttgatccagcac 124082
>gb|AC009343.9| Drosophila melanogaster clone BACR08L17, complete sequence Length = 182492 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 gttgcgctgctggacacgca 486 |||||||||||||||||||| Sbjct: 123116 gttgcgctgctggacacgca 123097
>ref|XM_516381.1| PREDICTED: Pan troglodytes similar to translation factor sui1 homolog (LOC460285), mRNA Length = 599 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||||||||| ||||| ||||||| ||||| || ||||||| Sbjct: 404 gccctgaacagtagtcagtgtctttctgccgttccgttgctgga 361
>gb|AC123708.17| Mus musculus chromosome 9, clone RP23-366E1, complete sequence Length = 195563 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||| ||||| ||||| |||| || |||||||||||||||| Sbjct: 128443 gccctgcacagtggtcagcgtcttcctgccgttgcgctgctgga 128486
>gb|AC186551.1| Pan troglodytes chromosome 7 clone CH251-720G4, complete sequence Length = 173362 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tttttgagatccttgagaatcttg 413 |||||||||||||||| ||||||| Sbjct: 6670 tttttgagatccttgaaaatcttg 6693
>gb|DQ279927.1| Human herpesvirus 4 strain AG876, complete genome Length = 172764 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 gctgctggacacgcacatgc 491 |||||||||||||||||||| Sbjct: 73728 gctgctggacacgcacatgc 73747
>gb|AC123865.5| Mus musculus BAC clone RP23-365C14 from chromosome 10, complete sequence Length = 212994 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 cacaccgatgccaaattcaaatgt 100 ||||| |||||||||||||||||| Sbjct: 116478 cacactgatgccaaattcaaatgt 116501
>gb|AC124722.3| Mus musculus BAC clone RP23-389E7 from chromosome 6, complete sequence Length = 193830 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tccgtgaatcttgatactct 267 |||||||||||||||||||| Sbjct: 107099 tccgtgaatcttgatactct 107118
>gb|AC102432.9| Mus musculus chromosome 19, clone RP24-114A21, complete sequence Length = 199240 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 tggacacgcacatgcacata 496 |||||||||||||||||||| Sbjct: 123636 tggacacgcacatgcacata 123617
>gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, complete sequence Length = 215356 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 tggacacgcacatgcacata 496 |||||||||||||||||||| Sbjct: 7427 tggacacgcacatgcacata 7446
>ref|NM_005875.2| Homo sapiens eukaryotic translation initiation factor 1B (EIF1B), mRNA Length = 1014 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||||||||| ||||| ||||||| ||||| || ||||||| Sbjct: 407 gccctgaacagtagtcagtgtctttctgccgttccgttgctgga 364
>gb|BC006996.1| Homo sapiens eukaryotic translation initiation factor 1B, mRNA (cDNA clone MGC:12271 IMAGE:4044439), complete cds Length = 1023 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||||||||| ||||| ||||||| ||||| || ||||||| Sbjct: 391 gccctgaacagtagtcagtgtctttctgccgttccgttgctgga 348
>gb|AC104186.2| Homo sapiens chromosome 3 clone RP11-391M1, complete sequence Length = 186317 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||||||||| ||||| ||||||| ||||| || ||||||| Sbjct: 20555 gccctgaacagtagtcagtgtctttctgccgttccgttgctgga 20512
>emb|CR610118.1| full-length cDNA clone CS0DI083YG09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 869 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||||||||| ||||| ||||||| ||||| || ||||||| Sbjct: 285 gccctgaacagtagtcagtgtctttctgccgttccgttgctgga 242
>emb|CR601510.1| full-length cDNA clone CS0DI009YF18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 706 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||||||||| ||||| ||||||| ||||| || ||||||| Sbjct: 204 gccctgaacagtagtcagtgtctttctgccgttccgttgctgga 161
>emb|CR600400.1| full-length cDNA clone CS0DN002YE04 of Adult brain of Homo sapiens (human) Length = 790 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||||||||| ||||| ||||||| ||||| || ||||||| Sbjct: 206 gccctgaacagtagtcagtgtctttctgccgttccgttgctgga 163
>ref|NM_176144.1| Drosophila melanogaster CG33144-RA (CG33144), mRNA Length = 4515 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 gttgcgctgctggacacgca 486 |||||||||||||||||||| Sbjct: 1724 gttgcgctgctggacacgca 1743
>gb|AC097512.2| Homo sapiens BAC clone RP11-412P11 from 4, complete sequence Length = 149282 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 atttgagtgttgcctaaaat 248 |||||||||||||||||||| Sbjct: 6346 atttgagtgttgcctaaaat 6327
>gb|AC090648.5| Genomic sequence for Mus musculus, clone RP23-331I23, complete sequence Length = 198695 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tccgtgaatcttgatactct 267 |||||||||||||||||||| Sbjct: 87691 tccgtgaatcttgatactct 87672
>gb|BC033505.1| Mus musculus eukaryotic translation initiation factor 1B, mRNA (cDNA clone MGC:36534 IMAGE:4209443), complete cds Length = 910 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||| ||||| ||||| |||| || |||||||||||||||| Sbjct: 323 gccctgcacagtggtcagcgtcttcctgccgttgcgctgctgga 280
>gb|BC030319.1| Mus musculus eukaryotic translation initiation factor 1B, mRNA (cDNA clone MGC:40900 IMAGE:5372299), complete cds Length = 891 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||| ||||| ||||| |||| || |||||||||||||||| Sbjct: 221 gccctgcacagtggtcagcgtcttcctgccgttgcgctgctgga 178
>ref|NM_026892.1| Mus musculus eukaryotic translation initiation factor 1B (Eif1b), mRNA Length = 885 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||| ||||| ||||| |||| || |||||||||||||||| Sbjct: 319 gccctgcacagtggtcagcgtcttcctgccgttgcgctgctgga 276
>emb|CR542223.1| Homo sapiens full open reading frame cDNA clone RZPDo834C1025D for gene GC20, translation factor sui1 homolog; complete cds, without stopcodon Length = 339 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||||||||| ||||| ||||||| ||||| || ||||||| Sbjct: 147 gccctgaacagtagtcagtgtctttctgccgttccgttgctgga 104
>emb|BX248080.21| Zebrafish DNA sequence from clone CH211-226C1 in linkage group 5, complete sequence Length = 188075 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 acaacttgcatcaacacacc 82 |||||||||||||||||||| Sbjct: 127788 acaacttgcatcaacacacc 127769
>dbj|AB169765.1| Macaca fascicularis brain cDNA, clone: QtrA-11743, similar to human translation factor sui1 homolog (GC20), mRNA, RefSeq: NM_005875.1 Length = 1019 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||||||||| ||||| ||||||| ||||| || ||||||| Sbjct: 407 gccctgaacagtagtcagtgtctttctgccgttccgttgctgga 364
>dbj|AK013965.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110001N14 product:ADULT MALE CEREBELLUM CDNA, RIKEN FULL-LENGTH ENRICHED LIBRARY, CLONE:1500010M16:SIMILAR TO PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG, FULL INSERT SEQUENCE homolog [Mus musculus], full insert sequence Length = 849 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||| ||||| ||||| |||| || |||||||||||||||| Sbjct: 325 gccctgcacagtggtcagcgtcttcctgccgttgcgctgctgga 282
>dbj|AK005192.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500010M16 product:Protein translation factor SUI1 homolog GC20 homolog [Homo sapiens], full insert sequence Length = 885 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||| ||||| ||||| |||| || |||||||||||||||| Sbjct: 319 gccctgcacagtggtcagcgtcttcctgccgttgcgctgctgga 276
>dbj|AK223448.1| Homo sapiens mRNA for translation factor sui1 homolog, clone: FCC113D06 Length = 929 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||||||||| ||||| ||||||| ||||| || ||||||| Sbjct: 402 gccctgaacagtagtcagtgtctttctgccgttccgttgctgga 359
>gb|BT003306.1| Drosophila melanogaster GH08706 full insert cDNA Length = 4533 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 gttgcgctgctggacacgca 486 |||||||||||||||||||| Sbjct: 1724 gttgcgctgctggacacgca 1743
>gb|AF263452.1|AF263452 Homo sapiens translational factor eIF-1 mRNA, complete cds Length = 945 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||||||||| ||||| ||||||| ||||| || ||||||| Sbjct: 380 gccctgaacagtagtcagtgtctttctgccgttccgttgctgga 337
>gb|AF077052.1| Homo sapiens protein translation factor sui1 homolog mRNA, complete cds Length = 992 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||||||||| ||||| ||||||| ||||| || ||||||| Sbjct: 388 gccctgaacagtagtcagtgtctttctgccgttccgttgctgga 345
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 agtgttgcctaaaatccgtg 253 |||||||||||||||||||| Sbjct: 1712792 agtgttgcctaaaatccgtg 1712773
>gb|AY894036.1| Synthetic construct Homo sapiens clone FLH131152.01L translation factor sui1-like (GC20) mRNA, partial cds Length = 342 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 437 gccctgaacagttgtcagactctttcttccgttgcgctgctgga 480 |||||||||||| ||||| ||||||| ||||| || ||||||| Sbjct: 147 gccctgaacagtagtcagtgtctttctgccgttccgttgctgga 104
>emb|V01555.2|EBV Epstein-Barr virus (EBV) genome, strain B95-8 Length = 172281 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 gctgctggacacgcacatgc 491 |||||||||||||||||||| Sbjct: 85882 gctgctggacacgcacatgc 85901
>gb|AE003828.4| Drosophila melanogaster chromosome 2R, section 22 of 73 of the complete sequence Length = 257907 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 gttgcgctgctggacacgca 486 |||||||||||||||||||| Sbjct: 115030 gttgcgctgctggacacgca 115011
>gb|AY961628.3| Human herpesvirus 4 strain GD1, complete genome Length = 171657 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 gctgctggacacgcacatgc 491 |||||||||||||||||||| Sbjct: 73612 gctgctggacacgcacatgc 73631
>emb|AJ507799.2|HHV507799 Human herpesvirus 4 complete wild type genome Length = 171823 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 gctgctggacacgcacatgc 491 |||||||||||||||||||| Sbjct: 73594 gctgctggacacgcacatgc 73613
>gb|M80517.1|HS4B958RAJ Epstein-Barr virus, artifactual joining of B95-8 complete genome and the sequences from Raji of the large deletion found in B95-8 Length = 184113 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 gctgctggacacgcacatgc 491 |||||||||||||||||||| Sbjct: 85882 gctgctggacacgcacatgc 85901 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,913,987 Number of Sequences: 3902068 Number of extensions: 4913987 Number of successful extensions: 91772 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 91416 Number of HSP's gapped (non-prelim): 341 length of query: 532 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 509 effective length of database: 17,143,297,704 effective search space: 8725938531336 effective search space used: 8725938531336 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
