ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal14n21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY074784.1| Triticum aestivum dehydroascorbate reductase (DHA... 400 e-108
2emb|AJ622892.1| Triticum durum partial mRNA for DRP5 protein (dr... 228 2e-56
3gb|DQ090998.1| Puccinellia tenuiflora dehydroascorbate reductase... 224 2e-55
4gb|DQ093638.1| Eustoma grandiflorum dehydroascorbate reductase p... 222 9e-55
5gb|AY106435.1| Zea mays PCO106999 mRNA sequence 103 6e-19
6gb|AY074786.1| Oryza sativa dehydroascorbate reductase (DHAR) mR... 72 2e-09
7dbj|AK070895.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
8dbj|AK061836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
9dbj|AB037970.1| Oryza sativa (japonica cultivar-group) DHAR1 mRN... 72 2e-09
10gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
11gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
12dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
13gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 44 0.48
14gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 42 1.9
15gb|DQ430382.1| Sorghum propinquum locus pSB1945 genomic sequence 42 1.9
16gb|DQ430381.1| Sorghum bicolor voucher PI585454 locus pSB1945 ge... 42 1.9
17gb|DQ430380.1| Sorghum bicolor voucher PI267539 locus pSB1945 ge... 42 1.9
18gb|DQ430379.1| Sorghum bicolor voucher PI267408 locus pSB1945 ge... 42 1.9
19gb|DQ430378.1| Sorghum bicolor voucher PI221607 locus pSB1945 ge... 42 1.9
20gb|DQ430377.1| Sorghum bicolor voucher PI152702 locus pSB1945 ge... 42 1.9
21gb|DQ430376.1| Sorghum bicolor voucher NSL92371 locus pSB1945 ge... 42 1.9
22gb|DQ430375.1| Sorghum bicolor voucher NSL87902 locus pSB1945 ge... 42 1.9
23gb|DQ430374.1| Sorghum bicolor voucher NSL87666 locus pSB1945 ge... 42 1.9
24gb|DQ430373.1| Sorghum bicolor voucher NSL77217 locus pSB1945 ge... 42 1.9
25gb|DQ430372.1| Sorghum bicolor voucher NSL77034 locus pSB1945 ge... 42 1.9
26gb|DQ430371.1| Sorghum bicolor voucher NSL56174 locus pSB1945 ge... 42 1.9
27gb|DQ430370.1| Sorghum bicolor voucher NSL56003 locus pSB1945 ge... 42 1.9
28gb|DQ430369.1| Sorghum bicolor voucher NSL55243 locus pSB1945 ge... 42 1.9
29gb|DQ430368.1| Sorghum bicolor voucher NSL51365 locus pSB1945 ge... 42 1.9
30gb|DQ430367.1| Sorghum bicolor voucher NSL51030 locus pSB1945 ge... 42 1.9
31gb|DQ430366.1| Sorghum bicolor voucher NSL50875 locus pSB1945 ge... 42 1.9
32gb|DQ430365.1| Sorghum bicolor voucher BTx623 locus pSB1945 geno... 42 1.9
33dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
34gb|AC109221.32| Mus musculus chromosome 7, clone RP23-207N2, com... 42 1.9
35gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
36dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.9
37gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 7.5
38gb|AC168056.3| Mus musculus BAC clone RP24-189B1 from chromosome... 40 7.5
39ref|XM_366481.1| Magnaporthe grisea 70-15 chromosome VII predict... 40 7.5
40ref|XM_714685.1| Candida albicans SC5314 hypothetical protein (C... 40 7.5
41ref|XM_714802.1| Candida albicans SC5314 hypothetical protein (C... 40 7.5
42gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.5
43gb|AF550129.1| Homo sapiens transcription factor Dp-1 (TFDP1) ge... 40 7.5
44gb|AC024608.4| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 7.5
45emb|AL662906.4| Human DNA sequence from clone RP11-111I12 on chr... 40 7.5
46emb|AL442125.13| Human DNA sequence from clone RP11-230F18 on ch... 40 7.5
47gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 7.5
48gb|AC091537.2| Rattus norvegicus strain Brown Norway clone RP31-... 40 7.5
49gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genom... 40 7.5
50gb|AC063918.21| Homo sapiens 3 BAC RP11-49C18 (Roswell Park Canc... 40 7.5
51gb|AC156608.10| Mus musculus chromosome 8, clone RP23-303A11, co... 40 7.5
52gb|AC078886.20| Homo sapiens 12 BAC RP11-299A16 (Roswell Park Ca... 40 7.5
53dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
54dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
55dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 7.5
56emb|BX088727.14| Zebrafish DNA sequence from clone DKEY-218A22 i... 40 7.5
57dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
58emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112... 40 7.5
59emb|Z84494.1|HSLUCA7 Human DNA sequence from clone XXcos-7 on ch... 40 7.5 
>gb|AY074784.1| Triticum aestivum dehydroascorbate reductase (DHAR) mRNA, complete
           cds
          Length = 956

 Score =  400 bits (202), Expect = e-108
 Identities = 272/294 (92%), Gaps = 1/294 (0%)
 Strand = Plus / Minus

                                                                       
Query: 263 ggcgggggagcttacgggttcaccttcggcgcccacccggcgatcaggttctccttggtc 322
           |||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 724 ggcgggagggcttacgggttcactttcggcgcccacccggcgatcaggttctccttggtc 665

                                                                       
Query: 323 ggcttggtcttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctg 382
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gccttggtcttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctg 605

                                                                       
Query: 383 gtcagtgtttcagggaccttccagcctttgaagtgctccaggggcaacctggaggtggaa 442
           ||||| |||||||||||||||||||| ||||||||||||| |||| |||||||| ||| |
Sbjct: 604 gtcagggtttcagggaccttccagcccttgaagtgctcca-gggcgacctggagatggta 546

                                                                       
Query: 443 gagcttcggagccaagctgagatccgcggcggagacattcgccccgttgatatagggtcc 502
           |||||||||||||| |||||||||  | |||||||  |||||||| ||||| ||||||||
Sbjct: 545 gagcttcggagccaggctgagatcgacagcggagatgttcgccccattgatgtagggtcc 486

                                                                 
Query: 503 atgggcctttaggtgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 485 atgggccttcaggtgctcttcgagcgcctgcagctcatcaacaagtgccttctc 432



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 153 aggctcgctcgcattattccaa 174
           ||||||||||||||||||||||
Sbjct: 806 aggctcgctcgcattattccaa 785
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>emb|AJ622892.1| Triticum durum partial mRNA for DRP5 protein (drg5 gene)
          Length = 478

 Score =  228 bits (115), Expect = 2e-56
 Identities = 158/171 (92%), Gaps = 1/171 (0%)
 Strand = Plus / Plus

                                                                       
Query: 383 gtcagtgtttcagggaccttccagcctttgaagtgctccaggggcaacctggaggtggaa 442
           ||||| |||||||||||||||||||| |||||||||||||||| | |||||||||||| |
Sbjct: 1   gtcagggtttcagggaccttccagcccttgaagtgctccaggg-cgacctggaggtggta 59

                                                                       
Query: 443 gagcttcggagccaagctgagatccgcggcggagacattcgccccgttgatatagggtcc 502
           |||||||||||||| |||||||||  |||||||||  |||||||||||||| ||||||||
Sbjct: 60  gagcttcggagccaggctgagatcgacggcggagatgttcgccccgttgatgtagggtcc 119

                                                              
Query: 503 atgggcctttaggtgctcttccagtgcctgcagctcgtcaacaagtgcctt 553
           ||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 120 atgggccttcaggtgctcttcgagtgcctgcagctcgtcaacaagtgcctt 170
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>gb|DQ090998.1| Puccinellia tenuiflora dehydroascorbate reductase protein mRNA,
           partial cds
          Length = 202

 Score =  224 bits (113), Expect = 2e-55
 Identities = 162/177 (91%), Gaps = 1/177 (0%)
 Strand = Plus / Minus

                                                                       
Query: 272 gcttacgggttcaccttcggcgcccacccggcgatcaggttctccttggtcggcttggtc 331
           |||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 200 gcttacgggttcactttgggcgcccatccggcgatcaggttctccttggtgggcttggtc 141

                                                                       
Query: 332 ttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagtgtt 391
           |||||||| || || |||||||| ||||||| |||||||||||||||||||||||| |||
Sbjct: 140 ttgacgaaggattcccggctgaacagagccttggtgtaggcatggacgctggtcagggtt 81

                                                                    
Query: 392 tcagggaccttccagcctttgaagtgctccaggggcaacctggaggtggaagagctt 448
           || ||||||||||| |||||||| ||||||| ||||||||||||| |||||||||||
Sbjct: 80  tcggggaccttccatcctttgaaatgctcca-gggcaacctggagatggaagagctt 25
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>gb|DQ093638.1| Eustoma grandiflorum dehydroascorbate reductase protein mRNA,
           partial cds
          Length = 195

 Score =  222 bits (112), Expect = 9e-55
 Identities = 158/172 (91%), Gaps = 1/172 (0%)
 Strand = Plus / Minus

                                                                       
Query: 277 cgggttcaccttcggcgcccacccggcgatcaggttctccttggtcggcttggtcttgac 336
           ||||||||| || |||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 195 cgggttcactttgggcgcccatccggcgatcaggttctccttggtgggcttggtcttgac 136

                                                                       
Query: 337 gaacgactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagtgtttcagg 396
           ||| || || |||||||| ||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 135 gaaggattcccggctgaacagagccttggtgtaggcatggacgctggtcagggtttcagg 76

                                                               
Query: 397 gaccttccagcctttgaagtgctccaggggcaacctggaggtggaagagctt 448
           ||||||||| |||||||| ||||||| ||||||||||||| |||||||||||
Sbjct: 75  gaccttccatcctttgaaatgctcca-gggcaacctggagatggaagagctt 25
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>gb|AY106435.1| Zea mays PCO106999 mRNA sequence
          Length = 1141

 Score =  103 bits (52), Expect = 6e-19
 Identities = 221/276 (80%), Gaps = 1/276 (0%)
 Strand = Plus / Minus

                                                                       
Query: 281 ttcaccttcggcgcccacccggcgatcaggttctccttggtcggcttggtcttgacgaac 340
           |||||||| |||||||| || || |||| || ||||| ||  ||||| |||||||| || 
Sbjct: 728 ttcaccttgggcgcccatcccgcaatcacgtgctcctcggatggcttagtcttgacaaaa 669

                                                                       
Query: 341 gactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagtgtttcagggacc 400
           || || |||||||| ||||||| ||||||||| |||||| |||| ||  |||| |||| |
Sbjct: 668 gattcacggctgaaaagagccttggtgtaggcgtggacgttggttaggttttctgggatc 609

                                                                       
Query: 401 ttccagcctttgaagtgctccaggggcaacctggaggtggaagagcttcggagccaagct 460
           |||||||||||||| ||||||| | || | ||| |||||||| ||||| ||  ||| |||
Sbjct: 608 ttccagcctttgaaatgctcca-gtgcgatctgtaggtggaaaagctttggccccaggct 550

                                                                       
Query: 461 gagatccgcggcggagacattcgccccgttgatatagggtccatgggcctttaggtgctc 520
            ||||| || || || || ||| |||| || || ||||| ||||| || || || || ||
Sbjct: 549 aagatcagctgctgacacgttctccccatttatgtaggggccatgagctttgagatgatc 490

                                               
Query: 521 ttccagtgcctgcagctcgtcaacaagtgccttctc 556
            ||||||||||||||||| || | ||| ||||||||
Sbjct: 489 atccagtgcctgcagctcatccagaagcgccttctc 454
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>gb|AY074786.1| Oryza sativa dehydroascorbate reductase (DHAR) mRNA, complete cds
          Length = 1067

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 181/228 (79%), Gaps = 1/228 (0%)
 Strand = Plus / Minus

                                                                       
Query: 329 gtcttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagt 388
           ||||||| ||| || |||||||| || |||||||| ||||| ||||| ||  |||| || 
Sbjct: 666 gtcttgatgaaagattcgcggctaaacagagcctctgtgtaagcatgaacattggttagg 607

                                                                       
Query: 389 gtttcagggaccttccagcctttgaagtgctccaggggcaacctggaggtggaagagctt 448
             ||| |||| ||||||||||||||| ||||||| | ||||||||||| ||| |||||||
Sbjct: 606 tcttccgggatcttccagcctttgaaatgctcca-gagcaacctggagatggtagagctt 548

                                                                       
Query: 449 cggagccaagctgagatccgcggcggagacattcgccccgttgatatagggtccatgggc 508
            || |||| ||| || || || || || |  |||  |||||||||| |||| ||||| ||
Sbjct: 547 tggtgccaggctaaggtcagcagctgaaatgttctgcccgttgataaaggggccatgagc 488

                                                           
Query: 509 ctttaggtgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
            || || ||||| || ||||||||||| ||   || ||||||||||||
Sbjct: 487 tttcagatgctcctcgagtgcctgcagttcagtaagaagtgccttctc 440
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>dbj|AK070895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074C02, full
           insert sequence
          Length = 1198

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 181/228 (79%), Gaps = 1/228 (0%)
 Strand = Plus / Minus

                                                                       
Query: 329 gtcttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagt 388
           ||||||| ||| || |||||||| || |||||||| ||||| ||||| ||  |||| || 
Sbjct: 667 gtcttgatgaaagattcgcggctaaacagagcctctgtgtaagcatgaacattggttagg 608

                                                                       
Query: 389 gtttcagggaccttccagcctttgaagtgctccaggggcaacctggaggtggaagagctt 448
             ||| |||| ||||||||||||||| ||||||| | ||||||||||| ||| |||||||
Sbjct: 607 tcttccgggatcttccagcctttgaaatgctcca-gagcaacctggagatggtagagctt 549

                                                                       
Query: 449 cggagccaagctgagatccgcggcggagacattcgccccgttgatatagggtccatgggc 508
            || |||| ||| || || || || || |  |||  |||||||||| |||| ||||| ||
Sbjct: 548 tggtgccaggctaaggtcagcagctgaaatgttctgcccgttgataaaggggccatgagc 489

                                                           
Query: 509 ctttaggtgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
            || || ||||| || ||||||||||| ||   || ||||||||||||
Sbjct: 488 tttcagatgctcctcgagtgcctgcagttcagtaagaagtgccttctc 441
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>dbj|AK061836.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D08, full
           insert sequence
          Length = 1053

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 181/228 (79%), Gaps = 1/228 (0%)
 Strand = Plus / Minus

                                                                       
Query: 329 gtcttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagt 388
           ||||||| ||| || |||||||| || |||||||| ||||| ||||| ||  |||| || 
Sbjct: 671 gtcttgatgaaagattcgcggctaaacagagcctctgtgtaagcatgaacattggttagg 612

                                                                       
Query: 389 gtttcagggaccttccagcctttgaagtgctccaggggcaacctggaggtggaagagctt 448
             ||| |||| ||||||||||||||| ||||||| | ||||||||||| ||| |||||||
Sbjct: 611 tcttccgggatcttccagcctttgaaatgctcca-gagcaacctggagatggtagagctt 553

                                                                       
Query: 449 cggagccaagctgagatccgcggcggagacattcgccccgttgatatagggtccatgggc 508
            || |||| ||| || || || || || |  |||  |||||||||| |||| ||||| ||
Sbjct: 552 tggtgccaggctaaggtcagcagctgaaatgttctgcccgttgataaaggggccatgagc 493

                                                           
Query: 509 ctttaggtgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
            || || ||||| || ||||||||||| ||   || ||||||||||||
Sbjct: 492 tttcagatgctcctcgagtgcctgcagttcagtaagaagtgccttctc 445
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>dbj|AB037970.1| Oryza sativa (japonica cultivar-group) DHAR1 mRNA for GSH-dependent
           dehydroascorbate reductase 1, complete cds
          Length = 1044

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 181/228 (79%), Gaps = 1/228 (0%)
 Strand = Plus / Minus

                                                                       
Query: 329 gtcttgacgaacgactcgcggctgaagagagcctcggtgtaggcatggacgctggtcagt 388
           ||||||| ||| || |||||||| || |||||||| ||||| ||||| ||  |||| || 
Sbjct: 636 gtcttgatgaaagattcgcggctaaacagagcctctgtgtaagcatgaacattggttagg 577

                                                                       
Query: 389 gtttcagggaccttccagcctttgaagtgctccaggggcaacctggaggtggaagagctt 448
             ||| |||| ||||||||||||||| ||||||| | ||||||||||| ||| |||||||
Sbjct: 576 tcttccgggatcttccagcctttgaaatgctcca-gagcaacctggagatggtagagctt 518

                                                                       
Query: 449 cggagccaagctgagatccgcggcggagacattcgccccgttgatatagggtccatgggc 508
            || |||| ||| || || || || || |  |||  |||||||||| |||| ||||| ||
Sbjct: 517 tggtgccaggctaaggtcagcagctgaaatgttctgcccgttgataaaggggccatgagc 458

                                                           
Query: 509 ctttaggtgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
            || || ||||| || ||||||||||| ||   || ||||||||||||
Sbjct: 457 tttcagatgctcctcgagtgcctgcagttcagtaagaagtgccttctc 410
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>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07,
             complete sequence
          Length = 164477

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 48/54 (88%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                   
Query: 395   gggaccttccagcctttgaagtgctccaggggcaacctggaggtggaagagctt 448
             |||| ||||||||||||||| ||||||| | ||||||||||| ||| |||||||
Sbjct: 50721 gggatcttccagcctttgaaatgctcca-gagcaacctggagatggtagagctt 50773
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>gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1654_B10,
              complete sequence
          Length = 140282

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 48/54 (88%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                    
Query: 395    gggaccttccagcctttgaagtgctccaggggcaacctggaggtggaagagctt 448
              |||| ||||||||||||||| ||||||| | ||||||||||| ||| |||||||
Sbjct: 118740 gggatcttccagcctttgaaatgctcca-gagcaacctggagatggtagagctt 118792
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 48/54 (88%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                    
Query: 395    gggaccttccagcctttgaagtgctccaggggcaacctggaggtggaagagctt 448
              |||| ||||||||||||||| ||||||| | ||||||||||| ||| |||||||
Sbjct: 846298 gggatcttccagcctttgaaatgctcca-gagcaacctggagatggtagagctt 846350
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>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 319     ggtcggcttggtcttgacgaacgact 344
               ||||||| ||||||||||||||||||
Sbjct: 1119794 ggtcggcctggtcttgacgaacgact 1119769
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 503     atgggcctttaggtgctcttccagt 527
               |||||||||||||||||||| ||||
Sbjct: 3943514 atgggcctttaggtgctcttgcagt 3943538
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>gb|DQ430382.1| Sorghum propinquum locus pSB1945 genomic sequence
          Length = 610

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 516 tgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||| ||||||||||||||||| || | ||| ||||||||
Sbjct: 597 tgctcatccagtgcctgcagctcatccagaagcgccttctc 557
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>gb|DQ430381.1| Sorghum bicolor voucher PI585454 locus pSB1945 genomic sequence
          Length = 618

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 516 tgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||| ||||||||||||||||| || | ||| ||||||||
Sbjct: 605 tgctcatccagtgcctgcagctcatccagaagcgccttctc 565
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>gb|DQ430380.1| Sorghum bicolor voucher PI267539 locus pSB1945 genomic sequence
          Length = 798

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 516 tgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||| ||||||||||||||||| || | ||| ||||||||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctc 745
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>gb|DQ430379.1| Sorghum bicolor voucher PI267408 locus pSB1945 genomic sequence
          Length = 609

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 516 tgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||| ||||||||||||||||| || | ||| ||||||||
Sbjct: 596 tgctcatccagtgcctgcagctcatccagaagcgccttctc 556
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>gb|DQ430378.1| Sorghum bicolor voucher PI221607 locus pSB1945 genomic sequence
          Length = 798

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 516 tgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||| ||||||||||||||||| || | ||| ||||||||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctc 745
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>gb|DQ430377.1| Sorghum bicolor voucher PI152702 locus pSB1945 genomic sequence
          Length = 798

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 516 tgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||| ||||||||||||||||| || | ||| ||||||||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctc 745
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>gb|DQ430376.1| Sorghum bicolor voucher NSL92371 locus pSB1945 genomic sequence
          Length = 798

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 516 tgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||| ||||||||||||||||| || | ||| ||||||||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctc 745
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>gb|DQ430375.1| Sorghum bicolor voucher NSL87902 locus pSB1945 genomic sequence
          Length = 798

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 516 tgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||| ||||||||||||||||| || | ||| ||||||||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctc 745
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>gb|DQ430374.1| Sorghum bicolor voucher NSL87666 locus pSB1945 genomic sequence
          Length = 798

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 516 tgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||| ||||||||||||||||| || | ||| ||||||||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctc 745
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>gb|DQ430373.1| Sorghum bicolor voucher NSL77217 locus pSB1945 genomic sequence
          Length = 798

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 516 tgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||| ||||||||||||||||| || | ||| ||||||||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctc 745
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>gb|DQ430372.1| Sorghum bicolor voucher NSL77034 locus pSB1945 genomic sequence
          Length = 798

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 516 tgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||| ||||||||||||||||| || | ||| ||||||||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctc 745
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>gb|DQ430371.1| Sorghum bicolor voucher NSL56174 locus pSB1945 genomic sequence
          Length = 798

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 516 tgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||| ||||||||||||||||| || | ||| ||||||||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctc 745
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>gb|DQ430370.1| Sorghum bicolor voucher NSL56003 locus pSB1945 genomic sequence
          Length = 798

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 516 tgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||| ||||||||||||||||| || | ||| ||||||||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctc 745
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>gb|DQ430369.1| Sorghum bicolor voucher NSL55243 locus pSB1945 genomic sequence
          Length = 798

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 516 tgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||| ||||||||||||||||| || | ||| ||||||||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctc 745
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>gb|DQ430368.1| Sorghum bicolor voucher NSL51365 locus pSB1945 genomic sequence
          Length = 798

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 516 tgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||| ||||||||||||||||| || | ||| ||||||||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctc 745
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>gb|DQ430367.1| Sorghum bicolor voucher NSL51030 locus pSB1945 genomic sequence
          Length = 618

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 516 tgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||| ||||||||||||||||| || | ||| ||||||||
Sbjct: 605 tgctcatccagtgcctgcagctcatccagaagcgccttctc 565
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>gb|DQ430366.1| Sorghum bicolor voucher NSL50875 locus pSB1945 genomic sequence
          Length = 798

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 516 tgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||| ||||||||||||||||| || | ||| ||||||||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctc 745
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>gb|DQ430365.1| Sorghum bicolor voucher BTx623 locus pSB1945 genomic sequence
          Length = 798

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 516 tgctcttccagtgcctgcagctcgtcaacaagtgccttctc 556
           ||||| ||||||||||||||||| || | ||| ||||||||
Sbjct: 785 tgctcatccagtgcctgcagctcatccagaagcgccttctc 745
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 19       acactcacaacacatgcacac 39
                |||||||||||||||||||||
Sbjct: 15563522 acactcacaacacatgcacac 15563542



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 20       cactcacaacacatgcacac 39
                ||||||||||||||||||||
Sbjct: 13201011 cactcacaacacatgcacac 13201030
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>gb|AC109221.32| Mus musculus chromosome 7, clone RP23-207N2, complete sequence
          Length = 195657

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 87    agccaggcagggggcagacag 107
             |||||||||||||||||||||
Sbjct: 71257 agccaggcagggggcagacag 71277
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 19       acactcacaacacatgcacac 39
                |||||||||||||||||||||
Sbjct: 15518787 acactcacaacacatgcacac 15518807



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 20       cactcacaacacatgcacac 39
                ||||||||||||||||||||
Sbjct: 13155285 cactcacaacacatgcacac 13155304
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 276    acgggttcaccttcggcgccc 296
              |||||||||||||||||||||
Sbjct: 209716 acgggttcaccttcggcgccc 209736
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    ccttggtcggcttggtcttg 334
              ||||||||||||||||||||
Sbjct: 505341 ccttggtcggcttggtcttg 505322
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>gb|AC168056.3| Mus musculus BAC clone RP24-189B1 from chromosome 13, complete sequence
          Length = 179458

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   cctggaggtggaagagcttc 449
             ||||||||||||||||||||
Sbjct: 51516 cctggaggtggaagagcttc 51497
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>ref|XM_366481.1| Magnaporthe grisea 70-15 chromosome VII predicted protein
           (MG02557.4) partial mRNA
          Length = 966

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 322 cggcttggtcttgacgaacg 341
           ||||||||||||||||||||
Sbjct: 216 cggcttggtcttgacgaacg 197
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>ref|XM_714685.1| Candida albicans SC5314 hypothetical protein (CaO19_14092), mRNA
          Length = 1569

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 214  tactactgccatcactactggcac 237
            ||||||||||| ||||||||||||
Sbjct: 1363 tactactgccagcactactggcac 1340
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>ref|XM_714802.1| Candida albicans SC5314 hypothetical protein (CaO19_6800), mRNA
          Length = 1569

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 214  tactactgccatcactactggcac 237
            ||||||||||| ||||||||||||
Sbjct: 1363 tactactgccagcactactggcac 1340
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 20       cactcacaacacatgcacac 39
                ||||||||||||||||||||
Sbjct: 25076004 cactcacaacacatgcacac 25076023
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>gb|AF550129.1| Homo sapiens transcription factor Dp-1 (TFDP1) gene, partial cds
          Length = 55319

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    cacactcacaacacatgcac 37
             ||||||||||||||||||||
Sbjct: 26835 cacactcacaacacatgcac 26816
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>gb|AC024608.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-333I24, complete
              sequence
          Length = 215829

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 18     cacactcacaacacatgcacaccc 41
              ||||| ||||||||||||||||||
Sbjct: 110051 cacacacacaacacatgcacaccc 110028
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>emb|AL662906.4| Human DNA sequence from clone RP11-111I12 on chromosome 1 Contains a
              novel gene, complete sequence
          Length = 134028

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 420    ccaggggcaacctggaggtg 439
              ||||||||||||||||||||
Sbjct: 125296 ccaggggcaacctggaggtg 125315
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>emb|AL442125.13| Human DNA sequence from clone RP11-230F18 on chromosome 13 Contains the
              5' end of the gene for FLJ10704 (FLJ20092), a  novel gene,
              a novel gene (FLJ20623), the TFDP1 gene for transcription
              factor Dp-1 (DP-1, DRTF1) and 5 CpG islands, complete
              sequence
          Length = 184889

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     cacactcacaacacatgcac 37
              ||||||||||||||||||||
Sbjct: 149704 cacactcacaacacatgcac 149685
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 300     cggcgatcaggttctccttg 319
               ||||||||||||||||||||
Sbjct: 3304928 cggcgatcaggttctccttg 3304947
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>gb|AC091537.2| Rattus norvegicus strain Brown Norway clone RP31-78C13, complete sequence
          Length = 119664

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     cactcacaacacatgcacac 39
              ||||||||||||||||||||
Sbjct: 102458 cactcacaacacatgcacac 102439
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>gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete
              sequence
          Length = 170020

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     cactcacaacacatgcacac 39
              ||||||||||||||||||||
Sbjct: 107811 cactcacaacacatgcacac 107830
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>gb|AC063918.21| Homo sapiens 3 BAC RP11-49C18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 97001

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 390   tttcagggaccttccagcct 409
             ||||||||||||||||||||
Sbjct: 18007 tttcagggaccttccagcct 17988
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>gb|AC156608.10| Mus musculus chromosome 8, clone RP23-303A11, complete sequence
          Length = 229633

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 16     ttcacactcacaacacatgcacac 39
              |||||| |||||||||||||||||
Sbjct: 206084 ttcacattcacaacacatgcacac 206061
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>gb|AC078886.20| Homo sapiens 12 BAC RP11-299A16 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 36964

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 24   cacaacacatgcacaccctt 43
            ||||||||||||||||||||
Sbjct: 8877 cacaacacatgcacaccctt 8896
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 20       cactcacaacacatgcacac 39
                ||||||||||||||||||||
Sbjct: 25167313 cactcacaacacatgcacac 25167332
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 20      cactcacaacacatgcacac 39
               ||||||||||||||||||||
Sbjct: 2053973 cactcacaacacatgcacac 2053954
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 304     gatcaggttctccttggtcg 323
               ||||||||||||||||||||
Sbjct: 3814314 gatcaggttctccttggtcg 3814295
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>emb|BX088727.14| Zebrafish DNA sequence from clone DKEY-218A22 in linkage group 2,
             complete sequence
          Length = 185178

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   ctcgcattattccaaaccca 179
             ||||||||||||||||||||
Sbjct: 28852 ctcgcattattccaaaccca 28833
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>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0026E05
          Length = 159860

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     cactcacaacacatgcacac 39
              ||||||||||||||||||||
Sbjct: 104181 cactcacaacacatgcacac 104162
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>emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112_F01 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 193499

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     cactcacaacacatgcacac 39
              ||||||||||||||||||||
Sbjct: 129732 cactcacaacacatgcacac 129713
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>emb|Z84494.1|HSLUCA7 Human DNA sequence from clone XXcos-7 on chromosome 3, complete
             sequence
          Length = 16950

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    agccaggcagggggcagaca 106
             ||||||||||||||||||||
Sbjct: 12882 agccaggcagggggcagaca 12863


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,426,789
Number of Sequences: 3902068
Number of extensions: 3426789
Number of successful extensions: 64930
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64501
Number of HSP's gapped (non-prelim): 417
length of query: 556
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 533
effective length of database: 17,143,297,704
effective search space: 9137377676232
effective search space used: 9137377676232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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