ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal15b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y334_BUCBP (Q89AG0) Hypothetical UPF0076 protein bbp_334 28 4.7
2Y2392_ARCFU (O30279) Hypothetical protein AF2392 28 6.1
3AGT2_RAT (Q64565) Alanine--glyoxylate aminotransferase 2, mitoch... 28 6.1
4GPI8_PONPY (Q5R6L8) GPI-anchor transamidase precursor (EC 3.-.-.... 28 6.1
5GPI8_PIG (Q4KRV1) GPI-anchor transamidase precursor (EC 3.-.-.-)... 28 6.1
6GPI8_HUMAN (Q92643) GPI-anchor transamidase precursor (EC 3.-.-.... 28 6.1
7GPI8_BOVIN (Q3MHZ7) GPI-anchor transamidase precursor (EC 3.-.-.... 28 6.1
8O52L2_HUMAN (Q8NGH6) Olfactory receptor 52L2 28 8.0
9O52L1_HUMAN (Q8NGH7) Olfactory receptor 52L1 28 8.0

>Y334_BUCBP (Q89AG0) Hypothetical UPF0076 protein bbp_334|
          Length = 126

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +3

Query: 66  YNFLRGILSSTNNLQQHLFFQPSIHTINIRTMLDVKELH 182
           + FL G +S T+N+  ++ FQ      NI  +L+ KE++
Sbjct: 26  FTFLSGQISQTDNINTNISFQTQSILQNINYILESKEMN 64



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>Y2392_ARCFU (O30279) Hypothetical protein AF2392|
          Length = 86

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
 Frame = +3

Query: 180 HRLTPIPGAMG---WMQETHDWDWHPPCPYRPS 269
           +R T +PG M    W    H WD+ P  PY P+
Sbjct: 17  YRATGLPGWMRCRWWGYRDHPWDYPPYPPYPPA 49



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>AGT2_RAT (Q64565) Alanine--glyoxylate aminotransferase 2, mitochondrial|
           precursor (EC 2.6.1.44)
           ((R)-3-amino-2-methylpropionate--pyruvate transaminase)
           (EC 2.6.1.40) (AGT 2) (Beta-alanine-pyruvate
           aminotransferase) (Beta-ALAAT II) (D-AIBAT)
          Length = 512

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 175 NYTD*LQFRGQWDGCRKLTIGI 240
           N+TD + FRG + GC   T+G+
Sbjct: 184 NHTDIISFRGAYHGCSPYTLGL 205



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>GPI8_PONPY (Q5R6L8) GPI-anchor transamidase precursor (EC 3.-.-.-) (GPI|
           transamidase) (Phosphatidylinositol-glycan biosynthesis,
           class K protein) (PIG-K)
          Length = 395

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 40  KLYDSHPPATIFSGVF*VLLIIYNSTYSFNH 132
           KL D HPP     G++ ++++++  TY   H
Sbjct: 360 KLKDWHPPGGFILGLWALIIMVFFKTYGIKH 390



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>GPI8_PIG (Q4KRV1) GPI-anchor transamidase precursor (EC 3.-.-.-) (GPI|
           transamidase) (Phosphatidylinositol-glycan biosynthesis,
           class K protein) (PIG-K)
          Length = 395

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 40  KLYDSHPPATIFSGVF*VLLIIYNSTYSFNH 132
           KL D HPP     G++ ++++++  TY   H
Sbjct: 360 KLKDWHPPGGFILGLWALIIMVFFKTYGIKH 390



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>GPI8_HUMAN (Q92643) GPI-anchor transamidase precursor (EC 3.-.-.-) (GPI|
           transamidase) (Phosphatidylinositol-glycan biosynthesis,
           class K protein) (PIG-K) (hGPI8)
          Length = 395

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 40  KLYDSHPPATIFSGVF*VLLIIYNSTYSFNH 132
           KL D HPP     G++ ++++++  TY   H
Sbjct: 360 KLKDWHPPGGFILGLWALIIMVFFKTYGIKH 390



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>GPI8_BOVIN (Q3MHZ7) GPI-anchor transamidase precursor (EC 3.-.-.-) (GPI|
           transamidase) (Phosphatidylinositol-glycan biosynthesis,
           class K protein) (PIG-K)
          Length = 395

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 40  KLYDSHPPATIFSGVF*VLLIIYNSTYSFNH 132
           KL D HPP     G++ ++++++  TY   H
Sbjct: 360 KLKDWHPPGGFILGLWALIIMVFFKTYGIKH 390



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>O52L2_HUMAN (Q8NGH6) Olfactory receptor 52L2|
          Length = 304

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 214 HPIAPGIGVNRCNSLTSNMVLIFIVWMD 131
           H IA  +G+    +L  N+ ++FI+WMD
Sbjct: 28  HWIALPLGILYLLALVGNVTILFIIWMD 55



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>O52L1_HUMAN (Q8NGH7) Olfactory receptor 52L1|
          Length = 314

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 214 HPIAPGIGVNRCNSLTSNMVLIFIVWMD 131
           H IA  +G+    +L  N+ ++FI+WMD
Sbjct: 28  HWIALPLGILYLLALVGNVTILFIIWMD 55


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,482,055
Number of Sequences: 219361
Number of extensions: 850404
Number of successful extensions: 1906
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1905
length of database: 80,573,946
effective HSP length: 66
effective length of database: 66,096,120
effective search space used: 1586306880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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