>gb|AF123610.1|AF123610 Triticum aestivum clone RED1-TA NADPH-cytochrome P450 reductase mRNA,
            partial cds
          Length = 2333

 Score =  351 bits (177), Expect = 7e-94
 Identities = 236/252 (93%), Gaps = 9/252 (3%)
 Strand = Plus / Minus

                                                                        
Query: 1    ggtctttaatgtatacatgatatgtcctcatctcatctcaaactgtatgattcacatccc 60
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2285 ggtctttaatgtatacatgatatgtcc-catctcatctcaaactgtatgattcacatccc 2227

                                                                        
Query: 61   cccgctacaattttctcaggggtattttaagttctactaataatctacaacagcacttat 120
            |||||||||||||||||||||| ||||||||||||| ||||   ||||||||||||||||
Sbjct: 2226 cccgctacaattttctcaggggcattttaagttctattaat---ctacaacagcacttat 2170

                                                                        
Query: 121  tctttcaaccatccatccatacaataaatattagaaccatgttagatgtcaaagaattac 180
            ||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2169 tctttcaaccatccat----acaataaatattagaaccatgttagatgtcaaagaattac 2114

                                                                        
Query: 181  accgattaactccaattccgggggcaatgggatggatgcaggaaactcacgattgggatt 240
            |||||| |||||||||| ||||||||||||||||||||||| |||||||| | | |||||
Sbjct: 2113 accgatgaactccaatttcgggggcaatgggatggatgcagaaaactcac-aatcggatt 2055

                        
Query: 241  ggcatccaccat 252
            ||||||||||||
Sbjct: 2054 ggcatccaccat 2043

>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06,
              complete sequence
          Length = 151506

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 88/102 (86%), Gaps = 6/102 (5%)
 Strand = Plus / Minus

                                                                          
Query: 102    aatctacaacagc-acttattctttcaaccatccatccat--acaataaatattagaacc 158
              ||||||||||||  |||||||||||||| |||||||  |   | |||||||||  |||||
Sbjct: 141869 aatctacaacaggtacttattctttcaatcatccatataataataataaatatcggaacc 141810

                                                        
Query: 159    atgttagatgtcaaagaattacaccga---ttaactccaatt 197
              |||||||||||||||||||||||||||   ||||||||||||
Sbjct: 141809 atgttagatgtcaaagaattacaccgacttttaactccaatt 141768



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                      
Query: 223    aaactcacgattgggattggcatccaccatgcccatacag 262
              |||||||||||| |||||||||| ||||||| || |||||
Sbjct: 141738 aaactcacgatt-ggattggcatgcaccatggccttacag 141700

>emb|AL606446.1|OSJN00016 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F16,
             complete sequence
          Length = 119535

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 88/102 (86%), Gaps = 6/102 (5%)
 Strand = Plus / Minus

                                                                         
Query: 102   aatctacaacagc-acttattctttcaaccatccatccat--acaataaatattagaacc 158
             ||||||||||||  |||||||||||||| |||||||  |   | |||||||||  |||||
Sbjct: 15487 aatctacaacaggtacttattctttcaatcatccatataataataataaatatcggaacc 15428

                                                       
Query: 159   atgttagatgtcaaagaattacaccga---ttaactccaatt 197
             |||||||||||||||||||||||||||   ||||||||||||
Sbjct: 15427 atgttagatgtcaaagaattacaccgacttttaactccaatt 15386



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                     
Query: 223   aaactcacgattgggattggcatccaccatgcccatacag 262
             |||||||||||| |||||||||| ||||||| || |||||
Sbjct: 15356 aaactcacgatt-ggattggcatgcaccatggccttacag 15318

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 88/102 (86%), Gaps = 6/102 (5%)
 Strand = Plus / Minus

                                                                            
Query: 102      aatctacaacagc-acttattctttcaaccatccatccat--acaataaatattagaacc 158
                ||||||||||||  |||||||||||||| |||||||  |   | |||||||||  |||||
Sbjct: 33369608 aatctacaacaggtacttattctttcaatcatccatataataataataaatatcggaacc 33369549

                                                          
Query: 159      atgttagatgtcaaagaattacaccga---ttaactccaatt 197
                |||||||||||||||||||||||||||   ||||||||||||
Sbjct: 33369548 atgttagatgtcaaagaattacaccgacttttaactccaatt 33369507



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                        
Query: 223      aaactcacgattgggattggcatccaccatgcccatacag 262
                |||||||||||| |||||||||| ||||||| || |||||
Sbjct: 33369477 aaactcacgatt-ggattggcatgcaccatggccttacag 33369439

>gb|AC104716.4| Homo sapiens chromosome 8 clone RP11-81A21 map q24.13, complete sequence
          Length = 147651

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 118    tattctttcaaccatccatcca 139
              ||||||||||||||||||||||
Sbjct: 102189 tattctttcaaccatccatcca 102168

>gb|AF216671.7| Homo sapiens chromosome 8 clone RP11-300I14 map q24.13, complete
             sequence
          Length = 183027

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 118   tattctttcaaccatccatcca 139
             ||||||||||||||||||||||
Sbjct: 79801 tattctttcaaccatccatcca 79780

>gb|AC133331.3| Homo sapiens chromosome 8 clone RP11-156O22 map q24.13, complete
             sequence
          Length = 174972

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 118   tattctttcaaccatccatcca 139
             ||||||||||||||||||||||
Sbjct: 64274 tattctttcaaccatccatcca 64253

>gb|AC009908.13| Homo sapiens chromosome 8, clone RP11-6D1, complete sequence
          Length = 174981

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 118   tattctttcaaccatccatcca 139
             ||||||||||||||||||||||
Sbjct: 64275 tattctttcaaccatccatcca 64254

>gb|AC115039.7| Mus musculus chromosome 6, clone RP24-279C2, complete sequence
          Length = 195362

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 4      ctttaatgtatacatgatatg 24
              |||||||||||||||||||||
Sbjct: 143564 ctttaatgtatacatgatatg 143584

>emb|CR450724.10| Zebrafish DNA sequence from clone DKEY-168I4 in linkage group 18,
             complete sequence
          Length = 197565

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 120   ttctttcaaccatccatccat 140
             |||||||||||||||||||||
Sbjct: 72773 ttctttcaaccatccatccat 72793

>ref|XM_650695.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (23.t00030)
           partial mRNA
          Length = 381

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 81  ggtattttaagttctactaataatc 105
           ||||||| |||||||||||||||||
Sbjct: 350 ggtatttgaagttctactaataatc 326

>gb|AC102132.3| Mus musculus chromosome 18, clone RP23-231D1, complete sequence
          Length = 183544

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 130    catccatccatacaataaata 150
              |||||||||||||||||||||
Sbjct: 175990 catccatccatacaataaata 176010

>emb|AL596252.11| Mouse DNA sequence from clone RP23-123O10 on chromosome 11 Contains the
              3' end of the Acac gene for acetyl-Coenzyme A carboxylase,
              complete sequence
          Length = 187803

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 186    ttaactccaattccgggggcaatgggatg 214
              |||||||||||||| |||| |||||||||
Sbjct: 153054 ttaactccaattccagggggaatgggatg 153082

>emb|BX324227.16| Zebrafish DNA sequence from clone CH211-149M17 in linkage group 15,
              complete sequence
          Length = 129726

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 124    ttcaaccatccatccatacaa 144
              |||||||||||||||||||||
Sbjct: 123296 ttcaaccatccatccatacaa 123316

>emb|BX247951.11| Zebrafish DNA sequence from clone DKEY-246A16 in linkage group 18,
             complete sequence
          Length = 189723

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 120   ttctttcaaccatccatccat 140
             |||||||||||||||||||||
Sbjct: 97716 ttctttcaaccatccatccat 97696

>gb|AC133955.4| Mus musculus BAC clone RP23-249M4 from 6, complete sequence
          Length = 185272

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 4      ctttaatgtatacatgatatg 24
              |||||||||||||||||||||
Sbjct: 181481 ctttaatgtatacatgatatg 181461

>gb|AC149313.2| Phakopsora pachyrhizi clone JGIAFNA-101K11, complete sequence
          Length = 42565

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   tctttcaaccatccatccat 140
             ||||||||||||||||||||
Sbjct: 36267 tctttcaaccatccatccat 36286

>gb|BT017201.1| Zea mays clone EL01N0371F12.c mRNA sequence
          Length = 1192

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   ctcatctcaaactgtatgat 51
            ||||||||||||||||||||
Sbjct: 1117 ctcatctcaaactgtatgat 1098

>gb|AC120339.18| Mus musculus chromosome 14, clone RP23-126A8, complete sequence
          Length = 228458

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 143   aataaatattagaaccatgttaga 166
             ||||||||||||||||| ||||||
Sbjct: 53745 aataaatattagaaccaggttaga 53722

>gb|AC089991.2| Bos taurus clone RP42-194K3, complete sequence
          Length = 159196

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    ttttaagttctactaataat 104
             ||||||||||||||||||||
Sbjct: 75169 ttttaagttctactaataat 75150

>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     ttttaagttctactaataat 104
              ||||||||||||||||||||
Sbjct: 831730 ttttaagttctactaataat 831711

>emb|BX537109.14| Zebrafish DNA sequence from clone DKEY-86P22 in linkage group 14,
             complete sequence
          Length = 231134

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 117   ttattctttcaaccatccatccat 140
             ||||||| ||||||||||||||||
Sbjct: 70491 ttattctctcaaccatccatccat 70468

>emb|AL096771.11|HSJ238D15 Human DNA sequence from clone RP1-238D15 on chromosome 6q12-14.3
            Contains 3' end of COL12A1 gene  for collagen, type XII,
            alpha 1, complete sequence
          Length = 112292

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   aataatctacaacagcactt 118
            ||||||||||||||||||||
Sbjct: 3528 aataatctacaacagcactt 3509

>emb|CR382401.1| Plasmodium falciparum chromosome 6, complete sequence; segment 4/5
          Length = 337203

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    catacaataaatattagaac 157
              ||||||||||||||||||||
Sbjct: 283639 catacaataaatattagaac 283658

>gb|AC084430.13| Homo sapiens 12p BAC RP11-96B19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 72022

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 129   ccatccatccatacaataaatatt 152
             |||||||||||| |||||||||||
Sbjct: 10295 ccatccatccatccaataaatatt 10318

>gb|AC158380.2| Mus musculus BAC clone RP24-178I16 from chromosome 6, complete sequence
          Length = 168179

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 129    ccatccatccatacaataaatatt 152
              |||||||||||| |||||||||||
Sbjct: 147030 ccatccatccatgcaataaatatt 147007

>gb|AC153646.3| Mus musculus BAC clone RP24-493K8 from chromosome 13, complete sequence
          Length = 166314

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    catctcaaactgtatgattc 53
             ||||||||||||||||||||
Sbjct: 46907 catctcaaactgtatgattc 46888

>gb|AF165906.1|AF165901S6 Homo sapiens GABA receptor subunit alpha 3 (GABRA3) gene, exon 6
          Length = 822

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 129 ccatccatccatacaataaa 148
           ||||||||||||||||||||
Sbjct: 139 ccatccatccatacaataaa 120

>gb|AC160147.6| Mus musculus 10 BAC RP24-576A6 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 145198

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   attggcatccaccatgccca 257
             ||||||||||||||||||||
Sbjct: 31206 attggcatccaccatgccca 31225

>gb|AF282854.4| Homo sapiens chromosome X clone RP11-157E12 map q28, complete sequence
          Length = 187411

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   ccatccatccatacaataaa 148
             ||||||||||||||||||||
Sbjct: 10832 ccatccatccatacaataaa 10851

>gb|AC116666.2| Homo sapiens chromosome X clone RP11-329E24 map q28, complete sequence
          Length = 169351

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    ccatccatccatacaataaa 148
              ||||||||||||||||||||
Sbjct: 142849 ccatccatccatacaataaa 142868

>emb|BX005235.8| Zebrafish DNA sequence from clone DKEY-68L7 in linkage group 23,
             complete sequence
          Length = 141636

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 117   ttattctttcaaccatccatccat 140
             |||||||| |||||||||||||||
Sbjct: 31550 ttattcttccaaccatccatccat 31573

>gb|AY103952.1| Zea mays PCO116681 mRNA sequence
          Length = 1813

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   ctcatctcaaactgtatgat 51
            ||||||||||||||||||||
Sbjct: 1689 ctcatctcaaactgtatgat 1670



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 161  gttagatgtcaaagaattacaccgattaactc 192
            |||||||||||||||||| ||| ||| |||||
Sbjct: 1557 gttagatgtcaaagaattgcactgatcaactc 1526

>gb|AC127590.3| Mus musculus BAC clone RP23-147I5 from 13, complete sequence
          Length = 208251

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     catctcaaactgtatgattc 53
              ||||||||||||||||||||
Sbjct: 177759 catctcaaactgtatgattc 177740

>emb|AL627385.13| Mouse DNA sequence from clone RP23-229I19 on chromosome X, complete
             sequence
          Length = 209817

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   tgggatggatgcaggaaact 227
             ||||||||||||||||||||
Sbjct: 16368 tgggatggatgcaggaaact 16387

>gb|U81834.1|HSU81834 Human cosmid LL12NC01-95H4, ETV6 gene, exon 2 and partial cds
          Length = 36558

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 129   ccatccatccatacaataaatatt 152
             |||||||||||| |||||||||||
Sbjct: 26322 ccatccatccatccaataaatatt 26299

>emb|AL929508.6| Zebrafish DNA sequence from clone CH211-158G13, complete sequence
          Length = 180029

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 117    ttattctttcaaccatccatccat 140
              |||||||| |||||||||||||||
Sbjct: 173397 ttattcttccaaccatccatccat 173374


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,406,249
Number of Sequences: 3902068
Number of extensions: 3406249
Number of successful extensions: 63273
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63153
Number of HSP's gapped (non-prelim): 116
length of query: 274
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 252
effective length of database: 17,147,199,772
effective search space: 4321094342544
effective search space used: 4321094342544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)