ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal6m01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT018175.1| Zea mays clone EL01N0557C11.c mRNA sequence Length = 780 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 437 ccctcgtgccgattcggcacgaggc 461 ||||||||||||||||||||||||| Sbjct: 32 ccctcgtgccgattcggcacgaggc 8
>gb|AY057456.1| Stizostedion vitreum clone C1-3 major histocompatibility class I receptor mRNA, complete cds Length = 1293 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 437 ccctcgtgccgattcggcacgaggc 461 ||||||||||||||||||||||||| Sbjct: 1112 ccctcgtgccgattcggcacgaggc 1088
>gb|AY620960.1| Pennisetum glaucum truncated vacuolar ATPase subunit c isoform mRNA, partial cds Length = 911 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 437 ccctcgtgccgattcggcacgaggc 461 ||||||||||||||||||||||||| Sbjct: 34 ccctcgtgccgattcggcacgaggc 10
>gb|BT016708.1| Zea mays clone Contig541 mRNA sequence Length = 1331 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 438 cctcgtgccgattcggcacgaggc 461 |||||||||||||||||||||||| Sbjct: 32 cctcgtgccgattcggcacgaggc 9 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 438 cctcgtgccgattcggcacgaggc 461 ||||||||||| |||||||||||| Sbjct: 10 cctcgtgccgaatcggcacgaggc 33
>gb|BT016274.1| Zea mays clone Contig107 mRNA sequence Length = 1486 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 438 cctcgtgccgattcggcacgaggc 461 |||||||||||||||||||||||| Sbjct: 496 cctcgtgccgattcggcacgaggc 473 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 438 cctcgtgccgattcggcacgaggc 461 ||||||||||| |||||||||||| Sbjct: 474 cctcgtgccgaatcggcacgaggc 497 Score = 40.1 bits (20), Expect = 6.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 435 agccctcgtgccga-ttcggcacgaggc 461 |||||||||||||| ||||||||||||| Sbjct: 447 agccctcgtgccgaattcggcacgaggc 474
>gb|AY190742.1| Pagrus major 40S ribosomal protein S15A mRNA, complete cds Length = 568 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 438 cctcgtgccgattcggcacgaggc 461 |||||||||||||||||||||||| Sbjct: 106 cctcgtgccgattcggcacgaggc 83
>gb|AY549572.1| Chlamydomonas reinhardtii mitochondrial NADH:ubiquinone oxidoreductase 10 kDa subunit precursor mRNA, complete cds; nuclear gene for mitochondrial product Length = 868 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 438 cctcgtgccgattcggcacgaggc 461 |||||||||||||||||||||||| Sbjct: 30 cctcgtgccgattcggcacgaggc 7 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 438 cctcgtgccgattcggcacgaggc 461 ||||||||||| |||||||||||| Sbjct: 8 cctcgtgccgaatcggcacgaggc 31
>emb|AJ619759.1| Polytomella sp. Pringsheim 198.80 mitochondrial atp3 gene for ATP synthase gamma chain, mitochondrial precursor Length = 1225 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 438 cctcgtgccgattcggcacgaggc 461 |||||||||||||||||||||||| Sbjct: 32 cctcgtgccgattcggcacgaggc 9
>gb|AF526250.1| Chlamys farreri clone iolscfcl363ct379cn399 ribosomal protein S20 mRNA, complete cds Length = 536 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 437 ccctcgtgccgattcggcacgagg 460 |||||||||||||||||||||||| Sbjct: 53 ccctcgtgccgattcggcacgagg 76
>gb|AY122071.1| Drosophila melanogaster AT15262 full insert cDNA Length = 1224 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 438 cctcgtgccgattcggcacgaggc 461 |||||||||||||||||||||||| Sbjct: 1 cctcgtgccgattcggcacgaggc 24
>dbj|AB228520.1| Aspergillus oryzae cDNA, contig sequence: AoEST5393 Length = 731 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 437 ccctcgtgccgattcggcacgagg 460 |||||||||||||||||||||||| Sbjct: 24 ccctcgtgccgattcggcacgagg 1
>gb|BC002897.2| Homo sapiens zinc finger protein 343, mRNA (cDNA clone IMAGE:3940750), complete cds Length = 847 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 438 cctcgtgccgattcggcacgaggc 461 |||||||||||||||||||||||| Sbjct: 1 cctcgtgccgattcggcacgaggc 24
>gb|AY609483.1| Sus scrofa clone Clu_131.scr.msk.p1.Contig2, mRNA sequence Length = 1502 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 438 cctcgtgccgattcggcacgaggc 461 |||||||||||||||||||||||| Sbjct: 1398 cctcgtgccgattcggcacgaggc 1421
>gb|AY551094.1| Crassostrea gigas cavortin mRNA, complete cds Length = 778 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 438 cctcgtgccgattcggcacgagg 460 ||||||||||||||||||||||| Sbjct: 1 cctcgtgccgattcggcacgagg 23
>gb|BT018602.1| Zea mays clone EL01N0449E02.d mRNA sequence Length = 1546 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 438 cctcgtgccgattcggcacgagg 460 ||||||||||||||||||||||| Sbjct: 1138 cctcgtgccgattcggcacgagg 1116 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 436 gccctcgtgccgattcggcacgagg 460 ||||||||||||| ||||||||||| Sbjct: 1114 gccctcgtgccgaatcggcacgagg 1138
>gb|AY857765.1| Triticum monococcum glyceraldehyde-3-phosphate dehydrogenase (GPD1) mRNA, partial cds Length = 630 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 438 cctcgtgccgattcggcacgagg 460 ||||||||||||||||||||||| Sbjct: 23 cctcgtgccgattcggcacgagg 1 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 438 cctcgtgccgattcggcacgaggc 461 ||||||||||| |||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgaggc 24
>gb|BT015300.1| Drosophila melanogaster AT22779 full insert cDNA Length = 1541 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 438 cctcgtgccgattcggcacgagg 460 ||||||||||||||||||||||| Sbjct: 23 cctcgtgccgattcggcacgagg 1 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 438 cctcgtgccgattcggcacgaggc 461 ||||||||||| |||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgaggc 24
>gb|AY223112.1| Schistosoma japonicum clone ZZD1382 mRNA sequence Length = 1276 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 438 cctcgtgccgattcggcacgagg 460 ||||||||||||||||||||||| Sbjct: 1 cctcgtgccgattcggcacgagg 23 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 ccctcgtgccgattcggcacgagg 460 |||||||||||| ||||||||||| Sbjct: 24 ccctcgtgccgaatcggcacgagg 1
>gb|AY222865.1| Schistosoma japonicum clone ZZD1198 mRNA sequence Length = 711 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 438 cctcgtgccgattcggcacgagg 460 ||||||||||||||||||||||| Sbjct: 23 cctcgtgccgattcggcacgagg 1 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 438 cctcgtgccgattcggcacgaggc 461 ||||||||||| |||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgaggc 24
>gb|AY113216.1| Drosophila melanogaster AT07420 full insert cDNA Length = 1395 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 438 cctcgtgccgattcggcacgagg 460 ||||||||||||||||||||||| Sbjct: 23 cctcgtgccgattcggcacgagg 1
>gb|AF304353.1|AF304353 Lampetra fluviatilis endophilin SH3p4 mRNA, complete cds Length = 1337 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 437 ccctcgtgccgattcggcacgag 459 ||||||||||||||||||||||| Sbjct: 1252 ccctcgtgccgattcggcacgag 1274
>gb|BC002907.2| Homo sapiens hypothetical protein FLJ20512, mRNA (cDNA clone MGC:10300 IMAGE:3941377), complete cds Length = 707 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 438 cctcgtgccgattcggcacgagg 460 ||||||||||||||||||||||| Sbjct: 23 cctcgtgccgattcggcacgagg 1 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 438 cctcgtgccgattcggcacgaggc 461 ||||||||||| |||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgaggc 24
>gb|AY849619.1| Magnaporthe grisea transporter-like protein mRNA, complete cds Length = 1770 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 438 cctcgtgccgattcggcacgagg 460 ||||||||||||||||||||||| Sbjct: 2 cctcgtgccgattcggcacgagg 24 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 438 cctcgtgccgattcggcacgaggc 461 ||||||||||| |||||||||||| Sbjct: 24 cctcgtgccgaatcggcacgaggc 1
>gb|BT015177.1| Drosophila melanogaster SD19814 full insert cDNA Length = 5154 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 ctcgtgccgattcggcacgagg 460 |||||||||||||||||||||| Sbjct: 1 ctcgtgccgattcggcacgagg 22
>ref|XM_369401.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG06063.4) partial mRNA Length = 3417 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 253 cagacgatgcagaggatgatggcgatgatc 282 ||||||||| ||||| |||||||||||||| Sbjct: 2765 cagacgatggagagggtgatggcgatgatc 2794
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 323 tctgcatcttgccgcgcgccgc 344 |||||||||||||||||||||| Sbjct: 1457604 tctgcatcttgccgcgcgccgc 1457583 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 ccggcaagccgcgcacgagc 230 |||||||||||||||||||| Sbjct: 3108158 ccggcaagccgcgcacgagc 3108177
>emb|AJ420188.1|FSY420188 Fagus sylvatica partial mRNA for ACC synthase 1.1 (acs1.1 gene) Length = 941 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 438 cctcgtgccgattcggcacgag 459 |||||||||||||||||||||| Sbjct: 22 cctcgtgccgattcggcacgag 1
>emb|AJ505009.1|DLA505009 Dicentrarchus labrax partially processed transcript RNA for oestrogen receptor alpha (ERalpha gene) Length = 3812 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 438 cctcgtgccgattcggcacgag 459 |||||||||||||||||||||| Sbjct: 10 cctcgtgccgattcggcacgag 31
>gb|AY050236.1| Drosophila melanogaster SD02116 full length cDNA Length = 2338 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 ctcgtgccgattcggcacgagg 460 |||||||||||||||||||||| Sbjct: 1 ctcgtgccgattcggcacgagg 22
>gb|AF049750.1|AF049750 Monodelphis domestica ModoVL10c Ig lambda light chain (Igl@) mRNA, complete cds Length = 775 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 ctcgtgccgattcggcacgagg 460 |||||||||||||||||||||| Sbjct: 9 ctcgtgccgattcggcacgagg 30
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 269 tgatggcgatgatcaccaccagcgc 293 |||||||| |||||||||||||||| Sbjct: 1477411 tgatggcgctgatcaccaccagcgc 1477387
>gb|AC137694.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0002B02, complete sequence Length = 148881 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 tggtagactggtagtagtatg 27 ||||||||||||||||||||| Sbjct: 42865 tggtagactggtagtagtatg 42885
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 tgatggcgatgatcaccacca 289 ||||||||||||||||||||| Sbjct: 3416670 tgatggcgatgatcaccacca 3416690
>gb|AY533301.1| Petroselinum crispum mitogen-activated protein kinase kinase 2 (MKK2) mRNA, complete cds Length = 1460 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 15 ctcgtgccgattcggcacgag 35
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 gatcaccaccagcgccaccag 299 ||||||||||||||||||||| Sbjct: 4704721 gatcaccaccagcgccaccag 4704701
>emb|AJ249225.1|XLA249225 Xenopus laevis mRNA for XFD-4' protein (fd-4' gene) Length = 2385 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 1 ctcgtgccgattcggcacgag 21
>gb|AF460237.1| Solanum tuberosum Kunitz-type enzyme inhibitor S9C11 mRNA, complete cds Length = 774 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 1 ctcgtgccgattcggcacgag 21
>gb|AC122827.3| Mus musculus BAC clone RP23-211N23 from chromosome 18, complete sequence Length = 194843 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 actgtactaacacactcacacacac 53 ||||||||||||||| ||||||||| Sbjct: 194730 actgtactaacacacacacacacac 194706
>gb|DQ087285.1| Burkholderia pseudomallei phage phi52237, complete genome Length = 37639 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 ctgcatcttgccgcgcgccgc 344 ||||||||||||||||||||| Sbjct: 17103 ctgcatcttgccgcgcgccgc 17123
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 cgatgatcaccaccagcgcca 295 ||||||||||||||||||||| Sbjct: 335340 cgatgatcaccaccagcgcca 335320
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 ctgcatcttgccgcgcgccgc 344 ||||||||||||||||||||| Sbjct: 159363 ctgcatcttgccgcgcgccgc 159383
>emb|AJ312288.1|CEL312288 Caenorhabditis elegans partial mRNA for putative transcription factor (ceh-43 gene) Length = 1039 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 1 ctcgtgccgattcggcacgag 21
>gb|AC161880.5| Mus musculus BAC clone RP23-261N13 from chromosome 18, complete sequence Length = 204676 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 actgtactaacacactcacacacac 53 ||||||||||||||| ||||||||| Sbjct: 69167 actgtactaacacacacacacacac 69143
>dbj|AB080201.1| Caenorhabditis elegans mRNA for C2-RGS protein, complete cds Length = 2427 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 31 ctcgtgccgattcggcacgag 11
>gb|AF465934.1| Elaeis oleifera DNA binding protein (DNAbp) mRNA, complete cds Length = 1601 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 1 ctcgtgccgattcggcacgag 21
>gb|AF456360.1|AF456360 Caenorhabditis elegans immunoglobulin domain-containing protein F02G3.1 mRNA, complete cds Length = 3261 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 29 ctcgtgccgattcggcacgag 9
>gb|AC123664.15| Mus musculus chromosome 5, clone RP23-224P16, complete sequence Length = 226777 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 actaacacactcacacacacg 54 ||||||||||||||||||||| Sbjct: 65757 actaacacactcacacacacg 65737
>gb|AC145765.2| Gasterosteus aculeatus clone CH213-7I21, complete sequence Length = 209087 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 tactaacacactcacacacac 53 ||||||||||||||||||||| Sbjct: 1039 tactaacacactcacacacac 1019
>gb|AF343876.1|AF343876 Clonorchis sinensis proline-rich antigen mRNA, partial cds Length = 826 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 1 ctcgtgccgattcggcacgag 21
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 tggtagactggtagtagtatg 27 ||||||||||||||||||||| Sbjct: 17985759 tggtagactggtagtagtatg 17985779
>gb|AF302079.1|AF302079 Homo sapiens HSP22-like protein interacting protein 17 mRNA, complete cds Length = 903 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 8 ctcgtgccgattcggcacgag 28
>gb|AY074433.1| Trichosurus vulpecula clone TrvuVK172 immunoglobulin kappa light chain variable region mRNA, partial cds Length = 467 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 6 ctcgtgccgattcggcacgag 26
>gb|AY074427.1| Trichosurus vulpecula clone TrvuVK138 immunoglobulin kappa light chain variable region mRNA, partial cds Length = 467 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 6 ctcgtgccgattcggcacgag 26
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ccaccagcgccaccaggggca 304 ||||||||||||||||||||| Sbjct: 924143 ccaccagcgccaccaggggca 924123
>dbj|D13758.1|RICSS230 Oryza sativa ss230 mRNA for ras-related GTP binding protein, complete cds Length = 946 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 1 ctcgtgccgattcggcacgag 21
>dbj|AB180417.1| Plutella xylostella mRNA for Ribosomal protein S29, complete cds Length = 472 Score = 42.1 bits (21), Expect = 1.6 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 434 aagccctcgtgccg-attcggcacgaggc 461 |||||||||||||| |||||||||||||| Sbjct: 316 aagccctcgtgccgaattcggcacgaggc 344
>dbj|BS000126.1| Pan troglodytes chromosome 22 clone:PTB-128A24, map 22, complete sequences Length = 207747 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 acacactcacacacacgacca 58 ||||||||||||||||||||| Sbjct: 117003 acacactcacacacacgacca 117023
>gb|AF177671.1|AF177671 Rattus norvegicus ATX1 homolog protein Rah1p (rah1) mRNA, complete cds Length = 503 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgattcggcacgag 1
>gb|AF130979.1|AF130979 Homo sapiens SH3 domain-containing protein 6511 mRNA, complete cds Length = 1907 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 35 ctcgtgccgattcggcacgag 15
>gb|AY109271.1| Zea mays PCO074636 mRNA sequence Length = 503 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 26 ctcgtgccgattcggcacgag 46
>gb|AY106084.1| Zea mays PCO072275 mRNA sequence Length = 1307 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 8 ctcgtgccgattcggcacgag 28
>gb|AF026844.1|AF026844 Homo sapiens ribosomal protein L41 mRNA, complete cds Length = 444 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgattcggcacgag 1
>dbj|AP001730.1| Homo sapiens genomic DNA, chromosome 21q, section 74/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 acacactcacacacacgacca 58 ||||||||||||||||||||| Sbjct: 278705 acacactcacacacacgacca 278725
>gb|U71195.1|GMU71195 Glycine max napin-type 2S albumin 3 mRNA, complete cds Length = 777 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 24 ctcgtgccgattcggcacgag 4
>dbj|AB080019.1| Xenopus laevis mRNA for galectin family xgalectin-VIa, complete cds Length = 1427 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 30 ctcgtgccgattcggcacgag 10
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 ctgcatcttgccgcgcgccgc 344 ||||||||||||||||||||| Sbjct: 1583370 ctgcatcttgccgcgcgccgc 1583390
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 tggtagactggtagtagtatg 27 ||||||||||||||||||||| Sbjct: 18076174 tggtagactggtagtagtatg 18076194
>gb|AF074334.1|AF074334 Drosophila melanogaster cyclin H homolog (CycH) mRNA, complete cds Length = 1244 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 7 ctcgtgccgattcggcacgag 27
>gb|AF008243.1|AF008243 Homo sapiens cosmid clone C102H1064 from 21q22.2, complete sequence Length = 34037 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 acacactcacacacacgacca 58 ||||||||||||||||||||| Sbjct: 19534 acacactcacacacacgacca 19514
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 28 tactgtactaacacactcacacaca 52 |||||| |||||||||||||||||| Sbjct: 283821 tactgtgctaacacactcacacaca 283797
>dbj|AB018544.1| Hydra magnipapillata mRNA for Hym-176 preprohormone, complete cds Length = 620 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 ctcgtgccgattcggcacgag 459 ||||||||||||||||||||| Sbjct: 6 ctcgtgccgattcggcacgag 26
>dbj|AP000160.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone D47-S479, segment 12/16, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 acacactcacacacacgacca 58 ||||||||||||||||||||| Sbjct: 26122 acacactcacacacacgacca 26142
>dbj|AP000018.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 9/13 Length = 100000 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 acacactcacacacacgacca 58 ||||||||||||||||||||| Sbjct: 60518 acacactcacacacacgacca 60538
>dbj|AP001417.2| Homo sapiens genomic DNA, chromosome 21q22.2, LB7T-ERG region, clone:D40 Length = 89723 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 acacactcacacacacgacca 58 ||||||||||||||||||||| Sbjct: 9270 acacactcacacacacgacca 9290
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 aggatgatggcgatgatcac 284 |||||||||||||||||||| Sbjct: 504218 aggatgatggcgatgatcac 504199
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 tgatggcgatgatcaccacc 288 |||||||||||||||||||| Sbjct: 141259 tgatggcgatgatcaccacc 141240
>gb|AC145089.7| Mus musculus chromosome 3, clone RP23-268K12, complete sequence Length = 167657 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 139222 actaacacactcacacacac 139241
>gb|BT016288.1| Zea mays clone Contig121 mRNA sequence Length = 1032 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 438 cctcgtgccgattcggcacgaggc 461 |||||||| ||||||||||||||| Sbjct: 202 cctcgtgctgattcggcacgaggc 179
>gb|AC161229.10| Mus musculus chromosome 7, clone RP24-88J19, complete sequence Length = 189105 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 159144 actaacacactcacacacac 159163
>gb|BC078673.1| Homo sapiens cDNA clone IMAGE:6090579 Length = 2676 Score = 40.1 bits (20), Expect = 6.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 435 agccctcgtgccga-ttcggcacgaggc 461 |||||||||||||| ||||||||||||| Sbjct: 1913 agccctcgtgccgaattcggcacgaggc 1940
>ref|XM_959093.1| Neurospora crassa OR74A hypothetical protein (NCU03137.1) partial mRNA Length = 2619 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 gatgcagaggatgatggcga 277 |||||||||||||||||||| Sbjct: 2047 gatgcagaggatgatggcga 2066
>ref|XM_330572.1| Neurospora crassa OR74A hypothetical protein (NCU03137.1) partial mRNA Length = 2619 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 gatgcagaggatgatggcga 277 |||||||||||||||||||| Sbjct: 2047 gatgcagaggatgatggcga 2066
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 ccggcaagccgcgcacgagc 230 |||||||||||||||||||| Sbjct: 1772920 ccggcaagccgcgcacgagc 1772939
>gb|AC132460.3| Mus musculus BAC clone RP23-31O23 from chromosome 17, complete sequence Length = 203971 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ctaacacactcacacacacg 54 |||||||||||||||||||| Sbjct: 122072 ctaacacactcacacacacg 122091
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ccagcgccaccaggggcagc 306 |||||||||||||||||||| Sbjct: 3007818 ccagcgccaccaggggcagc 3007799
>gb|AY810367.1| Schistosoma japonicum SJCHGC09331 protein mRNA, partial cds Length = 1249 Score = 40.1 bits (20), Expect = 6.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 434 aagccctcgtgccg-attcggcacgagg 460 |||||||||||||| ||||||||||||| Sbjct: 143 aagccctcgtgccgaattcggcacgagg 116
>gb|AY707613.1| Plasmodium vivax isolate NS06 merozoite surface protein 4 gene, partial cds Length = 846 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 gacgatgcagaggatgatgg 274 |||||||||||||||||||| Sbjct: 631 gacgatgcagaggatgatgg 650
>gb|AY559315.1| Lycopersicon esculentum ethylene response factor 5 (ERF5) mRNA, complete cds Length = 1347 Score = 40.1 bits (20), Expect = 6.2 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 426 agaagcttaagccctcgtgccg-attcggcacgagg 460 |||||||| |||||||||||| ||||||||||||| Sbjct: 899 agaagcttttgccctcgtgccgaattcggcacgagg 864
>gb|AC148831.2| Pan troglodytes BAC clone CH251-134F2 from chromosome 7, complete sequence Length = 163831 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 caccaccagcgccaccaggg 301 |||||||||||||||||||| Sbjct: 143332 caccaccagcgccaccaggg 143351 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 caccaccagcgccaccaggg 301 |||||||||||||||||||| Sbjct: 20499 caccaccagcgccaccaggg 20480
>gb|AC140265.2| Mus musculus BAC clone RP23-318B18 from chromosome 6, complete sequence Length = 178580 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 33763 actaacacactcacacacac 33744
>emb|CT009659.6| Mouse DNA sequence from clone CH29-604F11 on chromosome 17, complete sequence Length = 147269 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ctaacacactcacacacacg 54 |||||||||||||||||||| Sbjct: 93849 ctaacacactcacacacacg 93830
>gb|AC130210.4| Mus musculus BAC clone RP24-344N22 from chromosome 7, complete sequence Length = 186858 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 185062 actaacacactcacacacac 185043
>gb|AC129183.3| Mus musculus BAC clone RP23-350M13 from chromosome 3, complete sequence Length = 201277 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 79905 actaacacactcacacacac 79924
>emb|CR956386.6| Pig DNA sequence from clone CH242-152A8 on chromosome 17, complete sequence Length = 197576 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 atcaatcaatagtacatttcacat 91 |||||| ||||||||||||||||| Sbjct: 89546 atcaatgaatagtacatttcacat 89569
>gb|AE004164.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 72 of 251 of the complete chromosome Length = 12695 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gatggcgatgatcaccacca 289 |||||||||||||||||||| Sbjct: 11600 gatggcgatgatcaccacca 11619
>gb|AC108554.8| Rattus norvegicus 7 BAC CH230-81L13 (Children's Hospital Oakland Research Institute) complete sequence Length = 157107 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 130304 actaacacactcacacacac 130285
>emb|AL607043.12| Human DNA sequence from clone RP11-309P22 on chromosome 10 Contains a ribosomal protein S6 (RPS6) pseudogene, complete sequence Length = 169841 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 tgaagctgtggctcctcctg 390 |||||||||||||||||||| Sbjct: 72157 tgaagctgtggctcctcctg 72138
>emb|AL512368.9| Human DNA sequence from clone RP11-387L5 on chromosome 6, complete sequence Length = 147619 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 tgtactaacacactcacacacacg 54 ||||||||||||| |||||||||| Sbjct: 96877 tgtactaacacacacacacacacg 96900
>emb|AL353597.20| Human DNA sequence from clone RP1-153P14 on chromosome 6 Contains the gene for a novel protein (containing KIAA0082, FLJ22156 and FLJ20341), three novel genes, the gene for a novel protein and three CpG islands, complete sequence Length = 162451 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gggctgcagacaaaacacac 150 |||||||||||||||||||| Sbjct: 98123 gggctgcagacaaaacacac 98104
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 accaggggcagcgagatcac 314 |||||||||||||||||||| Sbjct: 1808104 accaggggcagcgagatcac 1808085
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 cgatgatcaccaccagcgcc 294 |||||||||||||||||||| Sbjct: 3514210 cgatgatcaccaccagcgcc 3514229
>emb|BX842637.1| Neurospora crassa DNA linkage group I cosmid contig 5C2 Length = 98769 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 gatgcagaggatgatggcga 277 |||||||||||||||||||| Sbjct: 43659 gatgcagaggatgatggcga 43640
>gb|AC160021.3| Pan troglodytes BAC clone CH251-564M21 from chromosome unknown, complete sequence Length = 201789 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 acacactcacacacacgacc 57 |||||||||||||||||||| Sbjct: 59806 acacactcacacacacgacc 59787
>emb|BX511310.13| Zebrafish DNA sequence from clone DKEY-274M14 in linkage group 23, complete sequence Length = 169760 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 47907 actaacacactcacacacac 47926
>gb|AC113115.17| Mus musculus chromosome 7, clone RP23-338L5, complete sequence Length = 197397 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 36091 actaacacactcacacacac 36072
>gb|AC099770.11| Mus musculus Strain C57BL6/J chromosome 5 BAC, RP23-349C19, Complete Sequence, complete sequence Length = 191223 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 74535 actaacacactcacacacac 74554
>gb|AC182735.3| Pan troglodytes BAC clone CH251-257K2 from chromosome 7, complete sequence Length = 156146 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 caccaccagcgccaccaggg 301 |||||||||||||||||||| Sbjct: 32761 caccaccagcgccaccaggg 32780
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 accaggggcagcgagatcac 314 |||||||||||||||||||| Sbjct: 1811794 accaggggcagcgagatcac 1811775
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gatcaccaccagcgccacca 298 |||||||||||||||||||| Sbjct: 1660218 gatcaccaccagcgccacca 1660237
>gb|AC083841.9| Homo sapiens chromosome 8, clone RP11-706C16, complete sequence Length = 203375 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tactaacacactcacacaca 52 |||||||||||||||||||| Sbjct: 78650 tactaacacactcacacaca 78669
>dbj|AB228636.1| Aspergillus oryzae cDNA, contig sequence: AoEST5509 Length = 117 Score = 40.1 bits (20), Expect = 6.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 434 aagccctcgtgccg-attcggcacgagg 460 |||||||||||||| ||||||||||||| Sbjct: 28 aagccctcgtgccgaattcggcacgagg 1
>dbj|AB228307.1| Aspergillus oryzae cDNA, contig sequence: AoEST5180 Length = 573 Score = 40.1 bits (20), Expect = 6.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 434 aagccctcgtgccg-attcggcacgagg 460 |||||||||||||| ||||||||||||| Sbjct: 28 aagccctcgtgccgaattcggcacgagg 1
>dbj|AB236766.1| Trifolium pratense RNA for putative DEAD-box protein abstrakt, complete cds, clone: C1562 Length = 2301 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 ccctcgtgccgattcggcacgagg 460 |||||||||| ||||||||||||| Sbjct: 46 ccctcgtgccaattcggcacgagg 23
>gb|AC022068.6| Homo sapiens chromosome 8, clone RP11-523C15, complete sequence Length = 202043 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 caaaacacaccacgacagcatgag 164 ||||||||||||| |||||||||| Sbjct: 67613 caaaacacaccaccacagcatgag 67636
>gb|AC099028.1| Drosophila melanogaster, chromosome 2R, region 55F-56X, BAC clone BACR08F09, complete sequence Length = 192358 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 137358 actaacacactcacacacac 137377
>gb|DP000048.1| Cercopithecus aethiops target 106 genomic scaffold Length = 583711 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 tgtactaacacactcacacacacg 54 |||||| ||||||||||||||||| Sbjct: 1547 tgtactcacacactcacacacacg 1570
>gb|AC020905.9| Homo sapiens chromosome 19 clone CTB-70G10, complete sequence Length = 141513 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 tgaagctgtggctcctcctg 390 |||||||||||||||||||| Sbjct: 125593 tgaagctgtggctcctcctg 125574
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 ccggcaagccgcgcacgagc 230 |||||||||||||||||||| Sbjct: 2255865 ccggcaagccgcgcacgagc 2255884
>gb|AC116820.11| Mus musculus chromosome 7, clone RP24-358B4, complete sequence Length = 152733 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 4344 actaacacactcacacacac 4363
>gb|AC164979.2| Mus musculus BAC clone RP23-244J23 from chromosome 16, complete sequence Length = 202286 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 133747 actaacacactcacacacac 133728
>gb|AF294499.1|AF294499 Micropterus dolomieu microsatellite Mdo 11 sequence Length = 174 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 93 actaacacactcacacacac 74
>ref|NM_022638.1| Rattus norvegicus transient receptor potential cation channel, subfamily C, member 2 (Trpc2), mRNA Length = 3340 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 gctgtggctcctcctgttgc 394 |||||||||||||||||||| Sbjct: 2133 gctgtggctcctcctgttgc 2152
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 tggcgatgatcaccaccagcgcca 295 ||||||||| |||||||||||||| Sbjct: 3167675 tggcgatgagcaccaccagcgcca 3167652
>gb|AC073385.14| Homo sapiens chromosome 8, clone RP11-304E16, complete sequence Length = 125535 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 tactaacacactcacacaca 52 |||||||||||||||||||| Sbjct: 6888 tactaacacactcacacaca 6869
>emb|AL840630.16| Zebrafish DNA sequence from clone CH211-279L11 in linkage group 17, complete sequence Length = 149164 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 23716 actaacacactcacacacac 23735
>gb|AC171180.2| Pan troglodytes BAC clone CH251-283C10 from chromosome unknown, complete sequence Length = 166310 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 acacactcacacacacgacc 57 |||||||||||||||||||| Sbjct: 116031 acacactcacacacacgacc 116012
>gb|AC005780.1|AC005780 Homo sapiens chromosome 19, cosmid F23049, complete sequence Length = 42393 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 tgaagctgtggctcctcctg 390 |||||||||||||||||||| Sbjct: 3226 tgaagctgtggctcctcctg 3207
>emb|AJ302017.1|PAB302017 Picea abies mRNA for putative plastidial w-3 fatty acid desaturase (fad3 gene) Length = 2248 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 ctcgtgccgattcggcacga 458 |||||||||||||||||||| Sbjct: 81 ctcgtgccgattcggcacga 62
>gb|AF136401.1|AF136401 Rattus norvegicus TRP2 mRNA, complete cds Length = 3340 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 gctgtggctcctcctgttgc 394 |||||||||||||||||||| Sbjct: 2133 gctgtggctcctcctgttgc 2152
>emb|Z23706.1|HS234VE1 H. sapiens (D8S518) DNA segment containing (CA) repeat; clone AFM234ve1; single read Length = 351 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 caaaacacaccacgacagcatgag 164 ||||||||||||| |||||||||| Sbjct: 9 caaaacacaccaccacagcatgag 32
>emb|CT027602.9| Mouse DNA sequence from clone RP24-359G24 on chromosome 16, complete sequence Length = 194283 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 156320 actaacacactcacacacac 156301
>gb|AE003798.3| Drosophila melanogaster chromosome 2R, section 52 of 73 of the complete sequence Length = 242365 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 133822 actaacacactcacacacac 133841
>dbj|AP006197.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-360J22, complete sequence Length = 159320 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gatgatggcgatgatcacca 286 |||||||||||||||||||| Sbjct: 13433 gatgatggcgatgatcacca 13414
>dbj|AP006195.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-278C16, complete sequence Length = 157800 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gatgatggcgatgatcacca 286 |||||||||||||||||||| Sbjct: 91738 gatgatggcgatgatcacca 91719
>gb|AC004345.1|AC004345 Drosophila melanogaster DNA sequence (P1 DS07069 (D244)), complete sequence Length = 86419 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 79360 actaacacactcacacacac 79341
>gb|AC127284.5| Mus musculus BAC clone RP23-334N1 from 3, complete sequence Length = 178989 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 98089 actaacacactcacacacac 98070
>gb|AC161488.7| Mus musculus chromosome 7, clone RP24-300N16, complete sequence Length = 183220 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 2192 actaacacactcacacacac 2173
>gb|AC161441.21| Mus musculus chromosome 7, clone RP24-158L15, complete sequence Length = 159403 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 actaacacactcacacacac 53 |||||||||||||||||||| Sbjct: 130766 actaacacactcacacacac 130747
>dbj|AB041992.1| Homo sapiens genomic DNA, chromosome 6q21, clone:576A9, complete sequence Length = 112519 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gatgatggcgatgatcacca 286 |||||||||||||||||||| Sbjct: 47615 gatgatggcgatgatcacca 47596
>gb|AC132804.2| Homo sapiens chromosome 16 clone LA16c-336H4, complete sequence Length = 36331 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 gatgcagaggatgatggcgatgat 281 |||| ||||||||||||||||||| Sbjct: 64 gatgaagaggatgatggcgatgat 41
>dbj|AP002529.1| Homo sapiens genomic DNA, chromosome 6q21, anti-oncogene region, section 2/4 Length = 300000 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gatgatggcgatgatcacca 286 |||||||||||||||||||| Sbjct: 247910 gatgatggcgatgatcacca 247891 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,892,930 Number of Sequences: 3902068 Number of extensions: 3892930 Number of successful extensions: 152419 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 135 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 151235 Number of HSP's gapped (non-prelim): 1187 length of query: 461 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 439 effective length of database: 17,147,199,772 effective search space: 7527620699908 effective search space used: 7527620699908 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
