| Clone Name | rbaal15a14 |
|---|---|
| Clone Library Name | barley_pub |
>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2424 Score = 34.7 bits (78), Expect = 0.23 Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 12/91 (13%) Frame = +1 Query: 289 RRGDGGYADDQGREQGGVQELAL--PQVPRG--GDRHVRG----DAGQRPGLRREEPAVV 444 R G G D +GG++ + RG GD H R G G R P Sbjct: 896 REGPYGRESDHQAREGGLEPPGFWEGEAERGKAGDPHRRHAHRQGVGGSGGSRSGSPRTG 955 Query: 445 GAPGEPRRH----HPGEEGQVDPFKNLGEYK 525 A GEPRRH PGE+G D + G ++ Sbjct: 956 TADGEPRRHRVHRRPGEDGPDDKAERRGRHR 986
>CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-channel| [Contains: Glutamic acid-rich protein (GARP); Cyclic-nucleotide-gated cation channel 4 (CNG channel 4) (CNG-4) (Cyclic nucleotide-gated cation channel modulatory subunit)] Length = 1394 Score = 33.9 bits (76), Expect = 0.40 Identities = 27/110 (24%), Positives = 45/110 (40%) Frame = +1 Query: 286 ERRGDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGEPR 465 E + DG +++GRE+ + + G+ + G +EE E Sbjct: 362 EEKEDGEEEEEEGREKEEEEGEEKEEEEGREKEEEEGEKKEEEGREKEEEEGGEKEDEEG 421 Query: 466 RHHPGEEGQVDPFKNLGEYKRDEGRHDVLCDAVAGAEVEARGDADQDHDL 615 R EEG+ + GE + +EGR + V G E E + +QDH + Sbjct: 422 REKEEEEGRGKEEEEGGEKEEEEGRGK---EEVEGREEEEDEEEEQDHSV 468
>SWC4_NEUCR (Q870Q1) SWR1-complex protein 4| Length = 771 Score = 32.7 bits (73), Expect = 0.88 Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 8/114 (7%) Frame = +1 Query: 286 ERRGDGGYADDQGREQGGVQELALPQVPRGGD--RHVRGDAGQRPGLRREEPAVVGAPGE 459 E G+GG ADD+ ++ GG GGD + G++ Q + ++ A + Sbjct: 589 EEEGEGGGADDKQKDGGGA----------GGDDAKDKSGESAQADEQKNDQKAEDAKAQK 638 Query: 460 PR------RHHPGEEGQVDPFKNLGEYKRDEGRHDVLCDAVAGAEVEARGDADQ 603 + + GEEG V P K G ++G+ D A A AE EA ++Q Sbjct: 639 EQQGEGQDQQKKGEEGLVVPIKEGG---GEKGQGDAAAAATA-AEKEAESSSNQ 688
>CO6A2_HUMAN (P12110) Collagen alpha-2(VI) chain precursor| Length = 1019 Score = 32.7 bits (73), Expect = 0.88 Identities = 25/56 (44%), Positives = 29/56 (51%), Gaps = 8/56 (14%) Frame = +1 Query: 358 PQVPRGGDRHVRGDAGQR--PGLRRE--EPAVVGAPGEP----RRHHPGEEGQVDP 501 P+ P GG RGD G + PG + E EPA G PGEP R PG EG+ P Sbjct: 532 PRGPEGG----RGDFGLKGEPGRKGEKGEPADPGPPGEPGPRGPRGVPGPEGEPGP 583 Score = 30.4 bits (67), Expect = 4.4 Identities = 33/105 (31%), Positives = 40/105 (38%), Gaps = 2/105 (1%) Frame = +1 Query: 292 RGDGGYADDQGREQGGVQELALPQVPRG--GDRHVRGDAGQRPGLRREEPAVVGAPGEPR 465 +GD G +G QG + E Q RG GD RGD+GQ P G PG P Sbjct: 465 KGDRGLPGPRG-PQGALGEPG-KQGSRGDPGDAGPRGDSGQ--------PGPKGDPGRPG 514 Query: 466 RHHPGEEGQVDPFKNLGEYKRDEGRHDVLCDAVAGAEVEARGDAD 600 +PG G G + GR D G + E AD Sbjct: 515 FSYPGPRGAPGEKGEPGPRGPEGGRGDFGLKGEPGRKGEKGEPAD 559
>6PGL_STRCO (Q9XAB7) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)| Length = 261 Score = 32.3 bits (72), Expect = 1.2 Identities = 24/79 (30%), Positives = 29/79 (36%), Gaps = 16/79 (20%) Frame = +1 Query: 277 VSAERRGDGGYADD-QGREQGGVQELALPQVPR---------------GGDRHVRGDAGQ 408 V A DG Y D + QELA VP G D HV + Sbjct: 106 VHAMAASDGPYGSDVEAAAAAYAQELATASVPENHAAVPSFDVLLLGVGPDTHVASLFPE 165 Query: 409 RPGLRREEPAVVGAPGEPR 465 PG+R E V+G G P+ Sbjct: 166 HPGVRETERTVIGVHGSPK 184
>CLIC6_RAT (Q811Q2) Chloride intracellular channel 6| Length = 612 Score = 32.0 bits (71), Expect = 1.5 Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 2/86 (2%) Frame = +1 Query: 250 GRRLSVQGVVSAERRGDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQ--RPGLR 423 GR S + G+G A G+E+GG G D + Q RPG Sbjct: 36 GREASEGAAEAPRDLGEGAEAMASGKEEGGC----------GQDGEIGEVQAQDPRPGPG 85 Query: 424 REEPAVVGAPGEPRRHHPGEEGQVDP 501 E P GAPGE EG + P Sbjct: 86 TETPGTSGAPGEAEAAECDSEGALIP 111
>MIR1_HHV8 (P90495) Modulator of immune recognition 1 (EC 6.3.2.-) (MIR1)| (IE1B protein) (ORF K3) Length = 333 Score = 31.6 bits (70), Expect = 2.0 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 8/92 (8%) Frame = +1 Query: 340 VQELALPQV-PRGGDRHVRGDAGQRPGLRR----EEPAVVGAPGEPRRHHPGEEGQVDP- 501 V+E+ L ++ PRG ++ G AG PG + P P + H E VD Sbjct: 175 VEEIELQEILPRGDNQDEEGPAGAAPGDQNGPAGAAPGDQDGPADGAPVHRDSEESVDEA 234 Query: 502 --FKNLGEYKRDEGRHDVLCDAVAGAEVEARG 591 +K GE ++GR D + G + G Sbjct: 235 AGYKEAGEPTHNDGRDDNVEPTAVGCDCNNLG 266
>COEA1_CHICK (P32018) Collagen alpha-1(XIV) chain precursor (Undulin)| Length = 1888 Score = 31.6 bits (70), Expect = 2.0 Identities = 28/79 (35%), Positives = 32/79 (40%), Gaps = 10/79 (12%) Frame = +1 Query: 295 GDGGYADDQGREQGGVQELALPQVP----RGGDRHVRGDAGQR--PGLR----REEPAVV 444 G G QG EQG P P R G+R + G+ G R PG+ R P Sbjct: 1670 GRPGAPGPQG-EQGSPGMQGFPGNPGQPGRPGERGLPGEKGDRGNPGVGTQGPRGPPGST 1728 Query: 445 GAPGEPRRHHPGEEGQVDP 501 G PGE R PG G P Sbjct: 1729 GPPGESRTGSPGPPGSPGP 1747
>U269_DEIRA (Q9RXP1) Protein DR0269| Length = 322 Score = 31.2 bits (69), Expect = 2.6 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 1/85 (1%) Frame = +1 Query: 286 ERRGDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGEPR 465 E RG+ + D+G ++GG + P+ RGG R G RP R E + G G R Sbjct: 173 EDRGERSFGGDRGGDRGGFR----PREDRGGFGGDRDRGGFRPREDRGERSFGGDRGGDR 228 Query: 466 RHHPGEEGQVDPFKNLGEY-KRDEG 537 G +G P ++ G + RD G Sbjct: 229 ----GGQGGFRPREDRGGFGDRDRG 249
>EWS_HUMAN (Q01844) RNA-binding protein EWS (EWS oncogene) (Ewing sarcoma| breakpoint region 1 protein) Length = 656 Score = 31.2 bits (69), Expect = 2.6 Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 5/118 (4%) Frame = +1 Query: 139 TSHWQRGPNIYSDATKLRLAAWPRRAYWSMLSFKCIVGRRLSVQGVVSAERRGDG----- 303 T + + P+ YS + +Y SF+ + V G S G G Sbjct: 244 TGSYSQAPSQYSQQSS---------SYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSM 294 Query: 304 GYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGEPRRHHP 477 D++GR +GG + + RGG R G AG+R G + PG P P Sbjct: 295 SGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGSAGERGGFNK--------PGGPMDEGP 344
>TENS_CHICK (Q04205) Tensin| Length = 1744 Score = 30.8 bits (68), Expect = 3.4 Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 6/62 (9%) Frame = +1 Query: 295 GDGGYADD-QGREQGGVQEL---ALPQVPRGGDRHVRGDAGQRPGLRRE--EPAVVGAPG 456 G GG+ D Q R+Q V + ALP PR R V + PG R PAV PG Sbjct: 1238 GRGGFQPDPQARQQPQVSVVGVHALPGSPRTLHRTVATNTPPSPGFGRRAANPAVASVPG 1297 Query: 457 EP 462 P Sbjct: 1298 SP 1299
>IF2_DESVH (Q72ER1) Translation initiation factor IF-2| Length = 1079 Score = 30.8 bits (68), Expect = 3.4 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 1/67 (1%) Frame = +1 Query: 292 RGDGGYADDQGREQGGVQELALPQVPRGGDR-HVRGDAGQRPGLRREEPAVVGAPGEPRR 468 R +GGY R +GG + P GG R + + G RPG R E A G PR Sbjct: 346 RPEGGYRPGAPRPEGGYR-------PAGGPRPEGQREGGYRPGAPRPEGGYRPAGGAPRP 398 Query: 469 HHPGEEG 489 E G Sbjct: 399 EGQREGG 405
>CO6A2_MOUSE (Q02788) Collagen alpha-2(VI) chain precursor| Length = 1029 Score = 30.8 bits (68), Expect = 3.4 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 8/56 (14%) Frame = +1 Query: 358 PQVPRGGDRHVRGDAGQR--PGLRRE--EPAVVGAPGEP----RRHHPGEEGQVDP 501 P P GG RGD G + PG + + EPA G PGEP R PG EG+ P Sbjct: 542 PPGPEGG----RGDFGLKGTPGRKGDKGEPADPGPPGEPGPRGPRGIPGPEGEPGP 593 Score = 30.0 bits (66), Expect = 5.7 Identities = 34/111 (30%), Positives = 42/111 (37%), Gaps = 2/111 (1%) Frame = +1 Query: 274 VVSAERRGDGGYADDQGREQGGVQELALPQVPRG--GDRHVRGDAGQRPGLRREEPAVVG 447 V S +GD G +G QG + E Q RG GD RGD+GQ P G Sbjct: 469 VGSKGAKGDRGLPGPRG-PQGALGEPG-KQGSRGDPGDAGPRGDSGQ--------PGPKG 518 Query: 448 APGEPRRHHPGEEGQVDPFKNLGEYKRDEGRHDVLCDAVAGAEVEARGDAD 600 PG P +PG G G + GR D G + + AD Sbjct: 519 DPGRPGFSYPGPRGTPGEKGEPGPPGPEGGRGDFGLKGTPGRKGDKGEPAD 569
>RHLB_XANCP (Q8P4D4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 573 Score = 30.4 bits (67), Expect = 4.4 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 7/70 (10%) Frame = +1 Query: 313 DDQGREQGGV-----QELALPQVPRGGDRHVRGDAGQRP--GLRREEPAVVGAPGEPRRH 471 DD G G + ++ A + RGG R G A + G RR+ G P PRR Sbjct: 408 DDAGDSVGTIFREAREQRAADEARRGGGRSGPGGASRSGSGGGRRDGAGADGKPRPPRRK 467 Query: 472 HPGEEGQVDP 501 P EG+ DP Sbjct: 468 -PRVEGEADP 476
>CADH5_HUMAN (P33151) Vascular endothelial-cadherin precursor (VE-cadherin)| (Cadherin-5) (7B4 antigen) (CD144 antigen) Length = 784 Score = 30.4 bits (67), Expect = 4.4 Identities = 21/64 (32%), Positives = 26/64 (40%) Frame = +1 Query: 355 LPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGEPRRHHPGEEGQVDPFKNLGEYKRDE 534 L V RGG + R RP L + +P RH PG G + E K+DE Sbjct: 663 LNSVRRGGAKPPRPALDARPSLYAQVQ-------KPPRHAPGAHGGPGEMAAMIEVKKDE 715 Query: 535 GRHD 546 HD Sbjct: 716 ADHD 719
>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)| Length = 1027 Score = 30.4 bits (67), Expect = 4.4 Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 4/73 (5%) Frame = +1 Query: 283 AERRGDGGYADDQGREQG-GVQELALPQVPRGGDRHVRGDAGQR--PGLRREEPAVVGAP 453 A +GDGG +QGR GV+ + P G H G+AG+R PG P G+P Sbjct: 258 AGAKGDGGPTGEQGRPGAPGVKGSSGPPGDVGAPGHA-GEAGKRGSPG----SPGPAGSP 312 Query: 454 G-EPRRHHPGEEG 489 G + R PG G Sbjct: 313 GPQGDRGLPGSRG 325 Score = 30.0 bits (66), Expect = 5.7 Identities = 28/67 (41%), Positives = 35/67 (52%) Frame = +1 Query: 289 RRGDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGEPRR 468 R G G +G++ G Q PQ P+G ++G AG PG R E P GAPGEP Sbjct: 380 RPGKDGRPGIRGKD--GKQGEQGPQGPQGL-AGLQGRAGP-PGARGE-PGKNGAPGEPGA 434 Query: 469 HHPGEEG 489 H GE+G Sbjct: 435 H--GEQG 439
>ALR2_THETN (Q8R860) Alanine racemase 2 (EC 5.1.1.1)| Length = 388 Score = 30.4 bits (67), Expect = 4.4 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = +1 Query: 238 KCIVGRRLSVQGVVSAERRGDGGYADDQGREQGGVQELALPQV 366 K +VG R+ V GVV A G G Y + + GV LA+ V Sbjct: 25 KRVVGDRVKVMGVVKANAYGHGAYHVAKALVENGVDYLAVATV 67
>VG48_SHV21 (Q01033) Hypothetical gene 48 protein| Length = 797 Score = 30.0 bits (66), Expect = 5.7 Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 7/111 (6%) Frame = +1 Query: 295 GDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAV-VGAPGEPRRH 471 GD G D+G E E G + GD G+ G E+ G GE Sbjct: 520 GDEGDEGDEGDEGEDEWE------DEGDEGEDEGDEGEDEGDEGEDEGEDEGDEGEDEGE 573 Query: 472 HPGEEGQV------DPFKNLGEYKRDEGRHDVLCDAVAGAEVEARGDADQD 606 G+EG+ D ++ GE + DEG + + G E E GD +D Sbjct: 574 DEGDEGEDEGEDEGDEGEDEGEDEGDEGEDEGEDEGDEGDEGEDEGDEGED 624 Score = 30.0 bits (66), Expect = 5.7 Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 2/115 (1%) Frame = +1 Query: 268 QGVVSAERRGDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVG 447 +G E GD G D+G ++G ++ + G D GD G+ G +E G Sbjct: 444 EGEDEGEDEGDEGDEGDEGEDEGEDED---DEEDEGEDEGDEGDEGEDEGDEGDEGEDEG 500 Query: 448 APGEPRRHHPGEEGQVDPFKNLGEY--KRDEGRHDVLCDAVAGAEVEARGDADQD 606 G+ + G+EG D K+ G+ + DEG G E E GD +D Sbjct: 501 DEGDEGKDE-GDEG--DEGKDEGDEGDEGDEGDEGEDEWEDEGDEGEDEGDEGED 552
>SM50_STRPU (P11994) 50 kDa spicule matrix protein precursor| Length = 445 Score = 30.0 bits (66), Expect = 5.7 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 1/86 (1%) Frame = +1 Query: 256 RLSVQGVVSAERRGDGGYADDQGREQG-GVQELALPQVPRGGDRHVRGDAGQRPGLRREE 432 RL Q V + G GG GR+ G G ++ P G G++PG+ ++ Sbjct: 319 RLGNQPGVGGRQPGMGGQPGVGGRQPGVGGRQPGFGNQP--------GVGGRQPGMGGQQ 370 Query: 433 PAVVGAPGEPRRHHPGEEGQVDPFKN 510 P + G PG R PG G+ F N Sbjct: 371 PGMGGQPGVGGR-QPGMGGRQPGFGN 395
>SSB_SALTY (P0A2F6) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 175 Score = 30.0 bits (66), Expect = 5.7 Identities = 27/101 (26%), Positives = 47/101 (46%) Frame = +1 Query: 151 QRGPNIYSDATKLRLAAWPRRAYWSMLSFKCIVGRRLSVQGVVSAERRGDGGYADDQGRE 330 ++G +Y + +LR W ++ + + V + + GV+ GG A G++ Sbjct: 72 RKGSQVYIEG-QLRTRKWTDQSGQERYTTEINVPQ---IGGVMQMLGGRQGGGAPAGGQQ 127 Query: 331 QGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAP 453 QGG + PQ P+GG++ G A RP ++ PA P Sbjct: 128 QGGWGQPQQPQQPQGGNQ-FSGGAQSRP--QQSAPAPSNEP 165
>SSB_SALTI (P0A2F7) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 175 Score = 30.0 bits (66), Expect = 5.7 Identities = 27/101 (26%), Positives = 47/101 (46%) Frame = +1 Query: 151 QRGPNIYSDATKLRLAAWPRRAYWSMLSFKCIVGRRLSVQGVVSAERRGDGGYADDQGRE 330 ++G +Y + +LR W ++ + + V + + GV+ GG A G++ Sbjct: 72 RKGSQVYIEG-QLRTRKWTDQSGQERYTTEINVPQ---IGGVMQMLGGRQGGGAPAGGQQ 127 Query: 331 QGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAP 453 QGG + PQ P+GG++ G A RP ++ PA P Sbjct: 128 QGGWGQPQQPQQPQGGNQ-FSGGAQSRP--QQSAPAPSNEP 165
>OS9_EMENI (Q5BDB9) Protein OS-9 homolog precursor| Length = 509 Score = 30.0 bits (66), Expect = 5.7 Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 2/105 (1%) Frame = +1 Query: 190 RLAAWPRRAYWSMLSFKCIVGRRLSVQGVVSAERRGDGGYADDQGREQGGVQELALPQVP 369 +L W + W++ + + G ++GVV + + GY +++G Q Sbjct: 409 KLEEWAKGKDWTL---EIVTGNGAYLRGVVDTDEDEEDGYENEEGETDKREQ-------- 457 Query: 370 RGGDRHVRGDAGQRPGLRREEPAVVGAPGEPR--RHHPGEEGQVD 498 R + G GQ PG +E G G P R GE+ VD Sbjct: 458 RENTQETTGQPGQ-PG--HQEETESGQAGHPMDDRSEDGEDPDVD 499
>BFSP1_BOVIN (Q06002) Filensin (Beaded filament structural protein 1)| Length = 756 Score = 29.6 bits (65), Expect = 7.5 Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 5/105 (4%) Frame = +1 Query: 295 GDGGYADD-----QGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGE 459 GDG + D +GGV V GD V D+G P ++ EP + G Sbjct: 473 GDGSFVDPGFCVFSVPAKGGV-------VVSKGDDSVPPDSGVEPSPQQPEPPLEEGQGP 525 Query: 460 PRRHHPGEEGQVDPFKNLGEYKRDEGRHDVLCDAVAGAEVEARGD 594 P+ G + + P + GE EG+ D + + G E +GD Sbjct: 526 PQEKEDGLKEEGGPPEGKGE--PPEGKGDSVKE--EGGPPEGKGD 566
>IP3KC_RAT (Q80ZG2) Inositol-trisphosphate 3-kinase C (EC 2.7.1.127) (Inositol| 1,4,5-trisphosphate 3-kinase C) (IP3K-C) Length = 678 Score = 29.6 bits (65), Expect = 7.5 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +1 Query: 352 ALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGEPRRHHP 477 ALP R G +RG ++PGL+R P G G P P Sbjct: 17 ALPAEARMGLEALRGGRRRQPGLQRPGPGAGGPTGRPEGGGP 58
>IP3KC_MOUSE (Q7TS72) Inositol-trisphosphate 3-kinase C (EC 2.7.1.127) (Inositol| 1,4,5-trisphosphate 3-kinase C) (IP3K-C) Length = 678 Score = 29.6 bits (65), Expect = 7.5 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +1 Query: 352 ALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGEPRRHHP 477 ALP R G +RG ++PGL+R P G G P P Sbjct: 17 ALPAEARMGLEALRGGRRRQPGLQRPGPGAGGPTGRPEGGGP 58
>GST1_YEAST (P40582) Glutathione S-transferase I (EC 2.5.1.18) (GST-I)| Length = 234 Score = 29.6 bits (65), Expect = 7.5 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +1 Query: 25 VLKKHWMDQYGFIRTVCLLQHLLV*YHKLPY 117 ++K HW+D R + LL HL + Y +PY Sbjct: 5 IIKVHWLDHSRAFRLLWLLDHLNLEYEIVPY 35
>6PGD_SYNP7 (P21577) 6-phosphogluconate dehydrogenase, decarboxylating (EC| 1.1.1.44) Length = 471 Score = 29.6 bits (65), Expect = 7.5 Identities = 19/64 (29%), Positives = 27/64 (42%) Frame = +2 Query: 353 LCPRYPAAVIVMSAATRASVPASVERSPPL*VPRESLDDITRERRDRLTPSRTSANTNVM 532 L P + ++ A R + + ER P+ SLD RRDRL + T A + Sbjct: 393 LAPEFRQTILDRQLAWRRVIAIAAERGIPVPAFSASLDYFDSYRRDRLPQNLTQAQRDYF 452 Query: 533 RADT 544 A T Sbjct: 453 GAHT 456
>DCP1A_HUMAN (Q9NPI6) mRNA decapping enzyme 1A (EC 3.-.-.-) (Transcription| factor SMIF) (Smad4-interacting transcriptional co-activator) Length = 582 Score = 29.6 bits (65), Expect = 7.5 Identities = 20/81 (24%), Positives = 35/81 (43%) Frame = +1 Query: 259 LSVQGVVSAERRGDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPA 438 +S G+ + + + G + G Q+ + P G +H+ + L +E+PA Sbjct: 178 ISSPGLQPSTQLSNLGSTETLEEMPSGSQDKSAPS----GHKHLTVEELFGTSLPKEQPA 233 Query: 439 VVGAPGEPRRHHPGEEGQVDP 501 VVG E PG+ Q +P Sbjct: 234 VVGLDSEEMERLPGDASQKEP 254
>CHSS2_MOUSE (Q6IQX7) Chondroitin sulfate synthase 2 (EC 2.4.1.175)| (Glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase II) (N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase II) (EC 2.4.1.226) (Chon Length = 774 Score = 29.3 bits (64), Expect = 9.8 Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 5/62 (8%) Frame = +1 Query: 322 GREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEP---AVVGAPGEPR--RHHPGEE 486 G Q G EL PRG R +PG RE P A G EPR +HP + Sbjct: 41 GPPQPGDSELP----PRGNTNAARRPNSVQPGSERERPGAGAGTGESWEPRVLPYHPAQP 96 Query: 487 GQ 492 GQ Sbjct: 97 GQ 98
>CO8A2_HUMAN (P25067) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 703 Score = 29.3 bits (64), Expect = 9.8 Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 9/80 (11%) Frame = +1 Query: 289 RRGDGGYADDQGREQGGVQELALPQVP--RG--GDRHVRGDAGQ-----RPGLRREEPAV 441 R G G A G++ +L LP P RG G ++G AG PGL+ E P + Sbjct: 434 RPGGPGVAGALGQKG----DLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGE-PGL 488 Query: 442 VGAPGEPRRHHPGEEGQVDP 501 G PGE R PG G P Sbjct: 489 PGPPGEGRAGEPGTAGPTGP 508
>CHSS2_HUMAN (Q8IZ52) Chondroitin sulfate synthase 2 (EC 2.4.1.175)| (Glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase II) (N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase II) (EC 2.4.1.226) (Chon Length = 775 Score = 29.3 bits (64), Expect = 9.8 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 5/62 (8%) Frame = +1 Query: 322 GREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAV---VGAPGEPR--RHHPGEE 486 G Q G EL PRG R +PG RE+P G EPR +HP + Sbjct: 41 GPPQPGDSELP----PRGNTNAARRPNSVQPGAEREKPGAGEGAGENWEPRVLPYHPAQP 96 Query: 487 GQ 492 GQ Sbjct: 97 GQ 98
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 29.3 bits (64), Expect = 9.8 Identities = 31/106 (29%), Positives = 40/106 (37%) Frame = +1 Query: 295 GDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGEPRRHH 474 G+GG D +G GG + P P R P +P G RR Sbjct: 251 GEGGEGD-RGTAGGGEGDRDDPPPPSPPPRPPPPLPPPPPPPPPPQPPPAGGSARRRRRG 309 Query: 475 PGEEGQVDPFKNLGEYKRDEGRHDVLCDAVAGAEVEARGDADQDHD 612 G G+ + G+ +R EG A A AE E GD D+D D Sbjct: 310 GGPPGRGGRRRG-GKRRRAEGTEA----AAADAEEEEDGDGDEDED 350
>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2| Length = 1125 Score = 29.3 bits (64), Expect = 9.8 Identities = 23/85 (27%), Positives = 34/85 (40%) Frame = +1 Query: 289 RRGDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGEPRR 468 RR DG +G +G A P V R A +RPG R + GAP P R Sbjct: 376 RRPDGTSVGTRGGSEG-----ATPPVERTATAPT---APKRPGHRPAQAPAAGAPRRPGR 427 Query: 469 HHPGEEGQVDPFKNLGEYKRDEGRH 543 + +++ +N K+ + H Sbjct: 428 PEWDDSAKLEALRNKSPQKQRQKVH 452
>CO6A3_CHICK (P15989) Collagen alpha-3(VI) chain precursor| Length = 3137 Score = 29.3 bits (64), Expect = 9.8 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 7/86 (8%) Frame = +1 Query: 283 AERRGDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQ-----RPGLRREE--PAV 441 A RRG G +G AL Q G++ +RG G PG+R E+ P Sbjct: 2205 AGRRGPIGVKGTKG---------ALGQPGPAGEQGMRGPQGPPGQIGTPGIRGEQGIPGP 2255 Query: 442 VGAPGEPRRHHPGEEGQVDPFKNLGE 519 G+P PGE G++ P GE Sbjct: 2256 RAGGGQPGA--PGERGRIGPLGRKGE 2279 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,015,333 Number of Sequences: 219361 Number of extensions: 1828175 Number of successful extensions: 7094 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 5506 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7076 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)