ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal15a14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel ... 35 0.23
2CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-ch... 34 0.40
3SWC4_NEUCR (Q870Q1) SWR1-complex protein 4 33 0.88
4CO6A2_HUMAN (P12110) Collagen alpha-2(VI) chain precursor 33 0.88
56PGL_STRCO (Q9XAB7) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL) 32 1.2
6CLIC6_RAT (Q811Q2) Chloride intracellular channel 6 32 1.5
7MIR1_HHV8 (P90495) Modulator of immune recognition 1 (EC 6.3.2.-... 32 2.0
8COEA1_CHICK (P32018) Collagen alpha-1(XIV) chain precursor (Undu... 32 2.0
9U269_DEIRA (Q9RXP1) Protein DR0269 31 2.6
10EWS_HUMAN (Q01844) RNA-binding protein EWS (EWS oncogene) (Ewing... 31 2.6
11TENS_CHICK (Q04205) Tensin 31 3.4
12IF2_DESVH (Q72ER1) Translation initiation factor IF-2 31 3.4
13CO6A2_MOUSE (Q02788) Collagen alpha-2(VI) chain precursor 31 3.4
14RHLB_XANCP (Q8P4D4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-) 30 4.4
15CADH5_HUMAN (P33151) Vascular endothelial-cadherin precursor (VE... 30 4.4
16CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment) 30 4.4
17ALR2_THETN (Q8R860) Alanine racemase 2 (EC 5.1.1.1) 30 4.4
18VG48_SHV21 (Q01033) Hypothetical gene 48 protein 30 5.7
19SM50_STRPU (P11994) 50 kDa spicule matrix protein precursor 30 5.7
20SSB_SALTY (P0A2F6) Single-stranded DNA-binding protein (SSB) (He... 30 5.7
21SSB_SALTI (P0A2F7) Single-stranded DNA-binding protein (SSB) (He... 30 5.7
22OS9_EMENI (Q5BDB9) Protein OS-9 homolog precursor 30 5.7
23BFSP1_BOVIN (Q06002) Filensin (Beaded filament structural protei... 30 7.5
24IP3KC_RAT (Q80ZG2) Inositol-trisphosphate 3-kinase C (EC 2.7.1.1... 30 7.5
25IP3KC_MOUSE (Q7TS72) Inositol-trisphosphate 3-kinase C (EC 2.7.1... 30 7.5
26GST1_YEAST (P40582) Glutathione S-transferase I (EC 2.5.1.18) (G... 30 7.5
276PGD_SYNP7 (P21577) 6-phosphogluconate dehydrogenase, decarboxyl... 30 7.5
28DCP1A_HUMAN (Q9NPI6) mRNA decapping enzyme 1A (EC 3.-.-.-) (Tran... 30 7.5
29CHSS2_MOUSE (Q6IQX7) Chondroitin sulfate synthase 2 (EC 2.4.1.17... 29 9.8
30CO8A2_HUMAN (P25067) Collagen alpha-2(VIII) chain precursor (End... 29 9.8
31CHSS2_HUMAN (Q8IZ52) Chondroitin sulfate synthase 2 (EC 2.4.1.17... 29 9.8
32VNUA_PRVKA (P33485) Probable nuclear antigen 29 9.8
33IF2_PROMM (Q7V5M4) Translation initiation factor IF-2 29 9.8
34CO6A3_CHICK (P15989) Collagen alpha-3(VI) chain precursor 29 9.8

>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2424

 Score = 34.7 bits (78), Expect = 0.23
 Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 12/91 (13%)
 Frame = +1

Query: 289  RRGDGGYADDQGREQGGVQELAL--PQVPRG--GDRHVRG----DAGQRPGLRREEPAVV 444
            R G  G   D    +GG++       +  RG  GD H R       G   G R   P   
Sbjct: 896  REGPYGRESDHQAREGGLEPPGFWEGEAERGKAGDPHRRHAHRQGVGGSGGSRSGSPRTG 955

Query: 445  GAPGEPRRH----HPGEEGQVDPFKNLGEYK 525
             A GEPRRH     PGE+G  D  +  G ++
Sbjct: 956  TADGEPRRHRVHRRPGEDGPDDKAERRGRHR 986



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>CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-channel|
           [Contains: Glutamic acid-rich protein (GARP);
           Cyclic-nucleotide-gated cation channel 4 (CNG channel 4)
           (CNG-4) (Cyclic nucleotide-gated cation channel
           modulatory subunit)]
          Length = 1394

 Score = 33.9 bits (76), Expect = 0.40
 Identities = 27/110 (24%), Positives = 45/110 (40%)
 Frame = +1

Query: 286 ERRGDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGEPR 465
           E + DG   +++GRE+   +     +          G+  +  G  +EE        E  
Sbjct: 362 EEKEDGEEEEEEGREKEEEEGEEKEEEEGREKEEEEGEKKEEEGREKEEEEGGEKEDEEG 421

Query: 466 RHHPGEEGQVDPFKNLGEYKRDEGRHDVLCDAVAGAEVEARGDADQDHDL 615
           R    EEG+    +  GE + +EGR     + V G E E   + +QDH +
Sbjct: 422 REKEEEEGRGKEEEEGGEKEEEEGRGK---EEVEGREEEEDEEEEQDHSV 468



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>SWC4_NEUCR (Q870Q1) SWR1-complex protein 4|
          Length = 771

 Score = 32.7 bits (73), Expect = 0.88
 Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
 Frame = +1

Query: 286 ERRGDGGYADDQGREQGGVQELALPQVPRGGD--RHVRGDAGQRPGLRREEPAVVGAPGE 459
           E  G+GG ADD+ ++ GG           GGD  +   G++ Q    + ++ A      +
Sbjct: 589 EEEGEGGGADDKQKDGGGA----------GGDDAKDKSGESAQADEQKNDQKAEDAKAQK 638

Query: 460 PR------RHHPGEEGQVDPFKNLGEYKRDEGRHDVLCDAVAGAEVEARGDADQ 603
            +      +   GEEG V P K  G    ++G+ D    A A AE EA   ++Q
Sbjct: 639 EQQGEGQDQQKKGEEGLVVPIKEGG---GEKGQGDAAAAATA-AEKEAESSSNQ 688



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>CO6A2_HUMAN (P12110) Collagen alpha-2(VI) chain precursor|
          Length = 1019

 Score = 32.7 bits (73), Expect = 0.88
 Identities = 25/56 (44%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
 Frame = +1

Query: 358 PQVPRGGDRHVRGDAGQR--PGLRRE--EPAVVGAPGEP----RRHHPGEEGQVDP 501
           P+ P GG    RGD G +  PG + E  EPA  G PGEP     R  PG EG+  P
Sbjct: 532 PRGPEGG----RGDFGLKGEPGRKGEKGEPADPGPPGEPGPRGPRGVPGPEGEPGP 583



 Score = 30.4 bits (67), Expect = 4.4
 Identities = 33/105 (31%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
 Frame = +1

Query: 292 RGDGGYADDQGREQGGVQELALPQVPRG--GDRHVRGDAGQRPGLRREEPAVVGAPGEPR 465
           +GD G    +G  QG + E    Q  RG  GD   RGD+GQ        P   G PG P 
Sbjct: 465 KGDRGLPGPRG-PQGALGEPG-KQGSRGDPGDAGPRGDSGQ--------PGPKGDPGRPG 514

Query: 466 RHHPGEEGQVDPFKNLGEYKRDEGRHDVLCDAVAGAEVEARGDAD 600
             +PG  G        G    + GR D       G + E    AD
Sbjct: 515 FSYPGPRGAPGEKGEPGPRGPEGGRGDFGLKGEPGRKGEKGEPAD 559



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>6PGL_STRCO (Q9XAB7) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)|
          Length = 261

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 24/79 (30%), Positives = 29/79 (36%), Gaps = 16/79 (20%)
 Frame = +1

Query: 277 VSAERRGDGGYADD-QGREQGGVQELALPQVPR---------------GGDRHVRGDAGQ 408
           V A    DG Y  D +       QELA   VP                G D HV     +
Sbjct: 106 VHAMAASDGPYGSDVEAAAAAYAQELATASVPENHAAVPSFDVLLLGVGPDTHVASLFPE 165

Query: 409 RPGLRREEPAVVGAPGEPR 465
            PG+R  E  V+G  G P+
Sbjct: 166 HPGVRETERTVIGVHGSPK 184



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>CLIC6_RAT (Q811Q2) Chloride intracellular channel 6|
          Length = 612

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
 Frame = +1

Query: 250 GRRLSVQGVVSAERRGDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQ--RPGLR 423
           GR  S     +    G+G  A   G+E+GG           G D  +     Q  RPG  
Sbjct: 36  GREASEGAAEAPRDLGEGAEAMASGKEEGGC----------GQDGEIGEVQAQDPRPGPG 85

Query: 424 REEPAVVGAPGEPRRHHPGEEGQVDP 501
            E P   GAPGE        EG + P
Sbjct: 86  TETPGTSGAPGEAEAAECDSEGALIP 111



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>MIR1_HHV8 (P90495) Modulator of immune recognition 1 (EC 6.3.2.-) (MIR1)|
           (IE1B protein) (ORF K3)
          Length = 333

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 8/92 (8%)
 Frame = +1

Query: 340 VQELALPQV-PRGGDRHVRGDAGQRPGLRR----EEPAVVGAPGEPRRHHPGEEGQVDP- 501
           V+E+ L ++ PRG ++   G AG  PG +       P     P +    H   E  VD  
Sbjct: 175 VEEIELQEILPRGDNQDEEGPAGAAPGDQNGPAGAAPGDQDGPADGAPVHRDSEESVDEA 234

Query: 502 --FKNLGEYKRDEGRHDVLCDAVAGAEVEARG 591
             +K  GE   ++GR D +     G +    G
Sbjct: 235 AGYKEAGEPTHNDGRDDNVEPTAVGCDCNNLG 266



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>COEA1_CHICK (P32018) Collagen alpha-1(XIV) chain precursor (Undulin)|
          Length = 1888

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 28/79 (35%), Positives = 32/79 (40%), Gaps = 10/79 (12%)
 Frame = +1

Query: 295  GDGGYADDQGREQGGVQELALPQVP----RGGDRHVRGDAGQR--PGLR----REEPAVV 444
            G  G    QG EQG       P  P    R G+R + G+ G R  PG+     R  P   
Sbjct: 1670 GRPGAPGPQG-EQGSPGMQGFPGNPGQPGRPGERGLPGEKGDRGNPGVGTQGPRGPPGST 1728

Query: 445  GAPGEPRRHHPGEEGQVDP 501
            G PGE R   PG  G   P
Sbjct: 1729 GPPGESRTGSPGPPGSPGP 1747



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>U269_DEIRA (Q9RXP1) Protein DR0269|
          Length = 322

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
 Frame = +1

Query: 286 ERRGDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGEPR 465
           E RG+  +  D+G ++GG +    P+  RGG    R   G RP   R E +  G  G  R
Sbjct: 173 EDRGERSFGGDRGGDRGGFR----PREDRGGFGGDRDRGGFRPREDRGERSFGGDRGGDR 228

Query: 466 RHHPGEEGQVDPFKNLGEY-KRDEG 537
               G +G   P ++ G +  RD G
Sbjct: 229 ----GGQGGFRPREDRGGFGDRDRG 249



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>EWS_HUMAN (Q01844) RNA-binding protein EWS (EWS oncogene) (Ewing sarcoma|
           breakpoint region 1 protein)
          Length = 656

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 5/118 (4%)
 Frame = +1

Query: 139 TSHWQRGPNIYSDATKLRLAAWPRRAYWSMLSFKCIVGRRLSVQGVVSAERRGDG----- 303
           T  + + P+ YS  +          +Y    SF+      + V G  S    G G     
Sbjct: 244 TGSYSQAPSQYSQQSS---------SYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSM 294

Query: 304 GYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGEPRRHHP 477
              D++GR +GG     + +  RGG R   G AG+R G  +        PG P    P
Sbjct: 295 SGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGSAGERGGFNK--------PGGPMDEGP 344



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>TENS_CHICK (Q04205) Tensin|
          Length = 1744

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
 Frame = +1

Query: 295  GDGGYADD-QGREQGGVQEL---ALPQVPRGGDRHVRGDAGQRPGLRRE--EPAVVGAPG 456
            G GG+  D Q R+Q  V  +   ALP  PR   R V  +    PG  R    PAV   PG
Sbjct: 1238 GRGGFQPDPQARQQPQVSVVGVHALPGSPRTLHRTVATNTPPSPGFGRRAANPAVASVPG 1297

Query: 457  EP 462
             P
Sbjct: 1298 SP 1299



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>IF2_DESVH (Q72ER1) Translation initiation factor IF-2|
          Length = 1079

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = +1

Query: 292 RGDGGYADDQGREQGGVQELALPQVPRGGDR-HVRGDAGQRPGLRREEPAVVGAPGEPRR 468
           R +GGY     R +GG +       P GG R   + + G RPG  R E     A G PR 
Sbjct: 346 RPEGGYRPGAPRPEGGYR-------PAGGPRPEGQREGGYRPGAPRPEGGYRPAGGAPRP 398

Query: 469 HHPGEEG 489
               E G
Sbjct: 399 EGQREGG 405



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>CO6A2_MOUSE (Q02788) Collagen alpha-2(VI) chain precursor|
          Length = 1029

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
 Frame = +1

Query: 358 PQVPRGGDRHVRGDAGQR--PGLRRE--EPAVVGAPGEP----RRHHPGEEGQVDP 501
           P  P GG    RGD G +  PG + +  EPA  G PGEP     R  PG EG+  P
Sbjct: 542 PPGPEGG----RGDFGLKGTPGRKGDKGEPADPGPPGEPGPRGPRGIPGPEGEPGP 593



 Score = 30.0 bits (66), Expect = 5.7
 Identities = 34/111 (30%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
 Frame = +1

Query: 274 VVSAERRGDGGYADDQGREQGGVQELALPQVPRG--GDRHVRGDAGQRPGLRREEPAVVG 447
           V S   +GD G    +G  QG + E    Q  RG  GD   RGD+GQ        P   G
Sbjct: 469 VGSKGAKGDRGLPGPRG-PQGALGEPG-KQGSRGDPGDAGPRGDSGQ--------PGPKG 518

Query: 448 APGEPRRHHPGEEGQVDPFKNLGEYKRDEGRHDVLCDAVAGAEVEARGDAD 600
            PG P   +PG  G        G    + GR D       G + +    AD
Sbjct: 519 DPGRPGFSYPGPRGTPGEKGEPGPPGPEGGRGDFGLKGTPGRKGDKGEPAD 569



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>RHLB_XANCP (Q8P4D4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)|
          Length = 573

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
 Frame = +1

Query: 313 DDQGREQGGV-----QELALPQVPRGGDRHVRGDAGQRP--GLRREEPAVVGAPGEPRRH 471
           DD G   G +     ++ A  +  RGG R   G A +    G RR+     G P  PRR 
Sbjct: 408 DDAGDSVGTIFREAREQRAADEARRGGGRSGPGGASRSGSGGGRRDGAGADGKPRPPRRK 467

Query: 472 HPGEEGQVDP 501
            P  EG+ DP
Sbjct: 468 -PRVEGEADP 476



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>CADH5_HUMAN (P33151) Vascular endothelial-cadherin precursor (VE-cadherin)|
           (Cadherin-5) (7B4 antigen) (CD144 antigen)
          Length = 784

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 21/64 (32%), Positives = 26/64 (40%)
 Frame = +1

Query: 355 LPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGEPRRHHPGEEGQVDPFKNLGEYKRDE 534
           L  V RGG +  R     RP L  +         +P RH PG  G       + E K+DE
Sbjct: 663 LNSVRRGGAKPPRPALDARPSLYAQVQ-------KPPRHAPGAHGGPGEMAAMIEVKKDE 715

Query: 535 GRHD 546
             HD
Sbjct: 716 ADHD 719



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>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)|
          Length = 1027

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
 Frame = +1

Query: 283 AERRGDGGYADDQGREQG-GVQELALPQVPRGGDRHVRGDAGQR--PGLRREEPAVVGAP 453
           A  +GDGG   +QGR    GV+  + P    G   H  G+AG+R  PG     P   G+P
Sbjct: 258 AGAKGDGGPTGEQGRPGAPGVKGSSGPPGDVGAPGHA-GEAGKRGSPG----SPGPAGSP 312

Query: 454 G-EPRRHHPGEEG 489
           G +  R  PG  G
Sbjct: 313 GPQGDRGLPGSRG 325



 Score = 30.0 bits (66), Expect = 5.7
 Identities = 28/67 (41%), Positives = 35/67 (52%)
 Frame = +1

Query: 289 RRGDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGEPRR 468
           R G  G    +G++  G Q    PQ P+G    ++G AG  PG R E P   GAPGEP  
Sbjct: 380 RPGKDGRPGIRGKD--GKQGEQGPQGPQGL-AGLQGRAGP-PGARGE-PGKNGAPGEPGA 434

Query: 469 HHPGEEG 489
           H  GE+G
Sbjct: 435 H--GEQG 439



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>ALR2_THETN (Q8R860) Alanine racemase 2 (EC 5.1.1.1)|
          Length = 388

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +1

Query: 238 KCIVGRRLSVQGVVSAERRGDGGYADDQGREQGGVQELALPQV 366
           K +VG R+ V GVV A   G G Y   +   + GV  LA+  V
Sbjct: 25  KRVVGDRVKVMGVVKANAYGHGAYHVAKALVENGVDYLAVATV 67



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>VG48_SHV21 (Q01033) Hypothetical gene 48 protein|
          Length = 797

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 7/111 (6%)
 Frame = +1

Query: 295 GDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAV-VGAPGEPRRH 471
           GD G   D+G E     E        G +    GD G+  G   E+     G  GE    
Sbjct: 520 GDEGDEGDEGDEGEDEWE------DEGDEGEDEGDEGEDEGDEGEDEGEDEGDEGEDEGE 573

Query: 472 HPGEEGQV------DPFKNLGEYKRDEGRHDVLCDAVAGAEVEARGDADQD 606
             G+EG+       D  ++ GE + DEG  +   +   G E E  GD  +D
Sbjct: 574 DEGDEGEDEGEDEGDEGEDEGEDEGDEGEDEGEDEGDEGDEGEDEGDEGED 624



 Score = 30.0 bits (66), Expect = 5.7
 Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
 Frame = +1

Query: 268 QGVVSAERRGDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVG 447
           +G    E  GD G   D+G ++G  ++    +   G D    GD G+  G   +E    G
Sbjct: 444 EGEDEGEDEGDEGDEGDEGEDEGEDED---DEEDEGEDEGDEGDEGEDEGDEGDEGEDEG 500

Query: 448 APGEPRRHHPGEEGQVDPFKNLGEY--KRDEGRHDVLCDAVAGAEVEARGDADQD 606
             G+  +   G+EG  D  K+ G+   + DEG          G E E  GD  +D
Sbjct: 501 DEGDEGKDE-GDEG--DEGKDEGDEGDEGDEGDEGEDEWEDEGDEGEDEGDEGED 552



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>SM50_STRPU (P11994) 50 kDa spicule matrix protein precursor|
          Length = 445

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
 Frame = +1

Query: 256 RLSVQGVVSAERRGDGGYADDQGREQG-GVQELALPQVPRGGDRHVRGDAGQRPGLRREE 432
           RL  Q  V   + G GG     GR+ G G ++      P        G  G++PG+  ++
Sbjct: 319 RLGNQPGVGGRQPGMGGQPGVGGRQPGVGGRQPGFGNQP--------GVGGRQPGMGGQQ 370

Query: 433 PAVVGAPGEPRRHHPGEEGQVDPFKN 510
           P + G PG   R  PG  G+   F N
Sbjct: 371 PGMGGQPGVGGR-QPGMGGRQPGFGN 395



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>SSB_SALTY (P0A2F6) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 175

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 27/101 (26%), Positives = 47/101 (46%)
 Frame = +1

Query: 151 QRGPNIYSDATKLRLAAWPRRAYWSMLSFKCIVGRRLSVQGVVSAERRGDGGYADDQGRE 330
           ++G  +Y +  +LR   W  ++     + +  V +   + GV+       GG A   G++
Sbjct: 72  RKGSQVYIEG-QLRTRKWTDQSGQERYTTEINVPQ---IGGVMQMLGGRQGGGAPAGGQQ 127

Query: 331 QGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAP 453
           QGG  +   PQ P+GG++   G A  RP  ++  PA    P
Sbjct: 128 QGGWGQPQQPQQPQGGNQ-FSGGAQSRP--QQSAPAPSNEP 165



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>SSB_SALTI (P0A2F7) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 175

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 27/101 (26%), Positives = 47/101 (46%)
 Frame = +1

Query: 151 QRGPNIYSDATKLRLAAWPRRAYWSMLSFKCIVGRRLSVQGVVSAERRGDGGYADDQGRE 330
           ++G  +Y +  +LR   W  ++     + +  V +   + GV+       GG A   G++
Sbjct: 72  RKGSQVYIEG-QLRTRKWTDQSGQERYTTEINVPQ---IGGVMQMLGGRQGGGAPAGGQQ 127

Query: 331 QGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAP 453
           QGG  +   PQ P+GG++   G A  RP  ++  PA    P
Sbjct: 128 QGGWGQPQQPQQPQGGNQ-FSGGAQSRP--QQSAPAPSNEP 165



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>OS9_EMENI (Q5BDB9) Protein OS-9 homolog precursor|
          Length = 509

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 2/105 (1%)
 Frame = +1

Query: 190 RLAAWPRRAYWSMLSFKCIVGRRLSVQGVVSAERRGDGGYADDQGREQGGVQELALPQVP 369
           +L  W +   W++   + + G    ++GVV  +   + GY +++G      Q        
Sbjct: 409 KLEEWAKGKDWTL---EIVTGNGAYLRGVVDTDEDEEDGYENEEGETDKREQ-------- 457

Query: 370 RGGDRHVRGDAGQRPGLRREEPAVVGAPGEPR--RHHPGEEGQVD 498
           R   +   G  GQ PG   +E    G  G P   R   GE+  VD
Sbjct: 458 RENTQETTGQPGQ-PG--HQEETESGQAGHPMDDRSEDGEDPDVD 499



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>BFSP1_BOVIN (Q06002) Filensin (Beaded filament structural protein 1)|
          Length = 756

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
 Frame = +1

Query: 295 GDGGYADD-----QGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGE 459
           GDG + D          +GGV       V   GD  V  D+G  P  ++ EP +    G 
Sbjct: 473 GDGSFVDPGFCVFSVPAKGGV-------VVSKGDDSVPPDSGVEPSPQQPEPPLEEGQGP 525

Query: 460 PRRHHPGEEGQVDPFKNLGEYKRDEGRHDVLCDAVAGAEVEARGD 594
           P+    G + +  P +  GE    EG+ D + +   G   E +GD
Sbjct: 526 PQEKEDGLKEEGGPPEGKGE--PPEGKGDSVKE--EGGPPEGKGD 566



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>IP3KC_RAT (Q80ZG2) Inositol-trisphosphate 3-kinase C (EC 2.7.1.127) (Inositol|
           1,4,5-trisphosphate 3-kinase C) (IP3K-C)
          Length = 678

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 352 ALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGEPRRHHP 477
           ALP   R G   +RG   ++PGL+R  P   G  G P    P
Sbjct: 17  ALPAEARMGLEALRGGRRRQPGLQRPGPGAGGPTGRPEGGGP 58



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>IP3KC_MOUSE (Q7TS72) Inositol-trisphosphate 3-kinase C (EC 2.7.1.127) (Inositol|
           1,4,5-trisphosphate 3-kinase C) (IP3K-C)
          Length = 678

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 352 ALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGEPRRHHP 477
           ALP   R G   +RG   ++PGL+R  P   G  G P    P
Sbjct: 17  ALPAEARMGLEALRGGRRRQPGLQRPGPGAGGPTGRPEGGGP 58



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>GST1_YEAST (P40582) Glutathione S-transferase I (EC 2.5.1.18) (GST-I)|
          Length = 234

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 25  VLKKHWMDQYGFIRTVCLLQHLLV*YHKLPY 117
           ++K HW+D     R + LL HL + Y  +PY
Sbjct: 5   IIKVHWLDHSRAFRLLWLLDHLNLEYEIVPY 35



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>6PGD_SYNP7 (P21577) 6-phosphogluconate dehydrogenase, decarboxylating (EC|
           1.1.1.44)
          Length = 471

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 19/64 (29%), Positives = 27/64 (42%)
 Frame = +2

Query: 353 LCPRYPAAVIVMSAATRASVPASVERSPPL*VPRESLDDITRERRDRLTPSRTSANTNVM 532
           L P +   ++    A R  +  + ER  P+     SLD     RRDRL  + T A  +  
Sbjct: 393 LAPEFRQTILDRQLAWRRVIAIAAERGIPVPAFSASLDYFDSYRRDRLPQNLTQAQRDYF 452

Query: 533 RADT 544
            A T
Sbjct: 453 GAHT 456



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>DCP1A_HUMAN (Q9NPI6) mRNA decapping enzyme 1A (EC 3.-.-.-) (Transcription|
           factor SMIF) (Smad4-interacting transcriptional
           co-activator)
          Length = 582

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 20/81 (24%), Positives = 35/81 (43%)
 Frame = +1

Query: 259 LSVQGVVSAERRGDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPA 438
           +S  G+  + +  + G  +       G Q+ + P     G +H+  +      L +E+PA
Sbjct: 178 ISSPGLQPSTQLSNLGSTETLEEMPSGSQDKSAPS----GHKHLTVEELFGTSLPKEQPA 233

Query: 439 VVGAPGEPRRHHPGEEGQVDP 501
           VVG   E     PG+  Q +P
Sbjct: 234 VVGLDSEEMERLPGDASQKEP 254



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>CHSS2_MOUSE (Q6IQX7) Chondroitin sulfate synthase 2 (EC 2.4.1.175)|
           (Glucuronosyl-N-acetylgalactosaminyl-proteoglycan
           4-beta-N-acetylgalactosaminyltransferase II)
           (N-acetylgalactosaminyl-proteoglycan
           3-beta-glucuronosyltransferase II) (EC 2.4.1.226) (Chon
          Length = 774

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
 Frame = +1

Query: 322 GREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEP---AVVGAPGEPR--RHHPGEE 486
           G  Q G  EL     PRG     R     +PG  RE P   A  G   EPR   +HP + 
Sbjct: 41  GPPQPGDSELP----PRGNTNAARRPNSVQPGSERERPGAGAGTGESWEPRVLPYHPAQP 96

Query: 487 GQ 492
           GQ
Sbjct: 97  GQ 98



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>CO8A2_HUMAN (P25067) Collagen alpha-2(VIII) chain precursor (Endothelial|
           collagen)
          Length = 703

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
 Frame = +1

Query: 289 RRGDGGYADDQGREQGGVQELALPQVP--RG--GDRHVRGDAGQ-----RPGLRREEPAV 441
           R G  G A   G++     +L LP  P  RG  G   ++G AG       PGL+ E P +
Sbjct: 434 RPGGPGVAGALGQKG----DLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGE-PGL 488

Query: 442 VGAPGEPRRHHPGEEGQVDP 501
            G PGE R   PG  G   P
Sbjct: 489 PGPPGEGRAGEPGTAGPTGP 508



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>CHSS2_HUMAN (Q8IZ52) Chondroitin sulfate synthase 2 (EC 2.4.1.175)|
           (Glucuronosyl-N-acetylgalactosaminyl-proteoglycan
           4-beta-N-acetylgalactosaminyltransferase II)
           (N-acetylgalactosaminyl-proteoglycan
           3-beta-glucuronosyltransferase II) (EC 2.4.1.226) (Chon
          Length = 775

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
 Frame = +1

Query: 322 GREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAV---VGAPGEPR--RHHPGEE 486
           G  Q G  EL     PRG     R     +PG  RE+P      G   EPR   +HP + 
Sbjct: 41  GPPQPGDSELP----PRGNTNAARRPNSVQPGAEREKPGAGEGAGENWEPRVLPYHPAQP 96

Query: 487 GQ 492
           GQ
Sbjct: 97  GQ 98



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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 31/106 (29%), Positives = 40/106 (37%)
 Frame = +1

Query: 295 GDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGEPRRHH 474
           G+GG  D +G   GG  +   P  P    R         P     +P   G     RR  
Sbjct: 251 GEGGEGD-RGTAGGGEGDRDDPPPPSPPPRPPPPLPPPPPPPPPPQPPPAGGSARRRRRG 309

Query: 475 PGEEGQVDPFKNLGEYKRDEGRHDVLCDAVAGAEVEARGDADQDHD 612
            G  G+    +  G+ +R EG       A A AE E  GD D+D D
Sbjct: 310 GGPPGRGGRRRG-GKRRRAEGTEA----AAADAEEEEDGDGDEDED 350



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>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2|
          Length = 1125

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 23/85 (27%), Positives = 34/85 (40%)
 Frame = +1

Query: 289 RRGDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQRPGLRREEPAVVGAPGEPRR 468
           RR DG     +G  +G     A P V R         A +RPG R  +    GAP  P R
Sbjct: 376 RRPDGTSVGTRGGSEG-----ATPPVERTATAPT---APKRPGHRPAQAPAAGAPRRPGR 427

Query: 469 HHPGEEGQVDPFKNLGEYKRDEGRH 543
               +  +++  +N    K+ +  H
Sbjct: 428 PEWDDSAKLEALRNKSPQKQRQKVH 452



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>CO6A3_CHICK (P15989) Collagen alpha-3(VI) chain precursor|
          Length = 3137

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
 Frame = +1

Query: 283  AERRGDGGYADDQGREQGGVQELALPQVPRGGDRHVRGDAGQ-----RPGLRREE--PAV 441
            A RRG  G    +G         AL Q    G++ +RG  G       PG+R E+  P  
Sbjct: 2205 AGRRGPIGVKGTKG---------ALGQPGPAGEQGMRGPQGPPGQIGTPGIRGEQGIPGP 2255

Query: 442  VGAPGEPRRHHPGEEGQVDPFKNLGE 519
                G+P    PGE G++ P    GE
Sbjct: 2256 RAGGGQPGA--PGERGRIGPLGRKGE 2279


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,015,333
Number of Sequences: 219361
Number of extensions: 1828175
Number of successful extensions: 7094
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 5506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7076
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5653129581
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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