ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal14i12 |
|---|---|
| Clone Library Name | barley_pub |
>KIN11_ARATH (P92958) SNF1-related protein kinase catalytic alpha subunit KIN11| (EC 2.7.11.1) (AKIN11) (AKIN alpha1) Length = 512 Score = 96.7 bits (239), Expect = 5e-20 Identities = 51/85 (60%), Positives = 59/85 (69%), Gaps = 3/85 (3%) Frame = -1 Query: 594 VLKALQELNVYWKKIXHYNMKCRWSPGF-PGQDNMNHTNYNFIAEP--IETDDVGDKLNL 424 VLKALQELNV WKKI HYNMKCRW PG GQ+ M + +F E IE D + Sbjct: 410 VLKALQELNVCWKKIGHYNMKCRWVPGLADGQNTMVNNQLHFRDESSIIEDDCAMTSPTV 469 Query: 423 IKFELQLYKTKDEKYLLDLQRASGP 349 IKFELQLYK ++EKYLLD+QR +GP Sbjct: 470 IKFELQLYKAREEKYLLDIQRVNGP 494
>KIN10_ARATH (Q38997) SNF1-related protein kinase catalytic alpha subunit KIN10| (EC 2.7.11.1) (AKIN10) (AKIN alpha2) Length = 535 Score = 93.6 bits (231), Expect = 4e-19 Identities = 53/105 (50%), Positives = 60/105 (57%), Gaps = 5/105 (4%) Frame = -1 Query: 594 VLKALQELNVYWKKIXHYNMKCRWSPGFPGQ---DNMNHTNYNFIAEP--IETDDVGDKL 430 VLKALQ+LNV WKKI HYNMKCRW P N H N F E IE + Sbjct: 431 VLKALQDLNVCWKKIGHYNMKCRWVPNSSADGMLSNSMHDNNYFGDESSIIENEAAVKSP 490 Query: 429 NLIKFELQLYKTKDEKYLLDLQRASGPHXXXXXXXXXXXXXLRVL 295 N++KFE+QLYKT+D+KYLLDLQR GP LRVL Sbjct: 491 NVVKFEIQLYKTRDDKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL 535
>RKIN1_SECCE (Q02723) Carbon catabolite derepressing protein kinase (EC| 2.7.11.1) Length = 502 Score = 89.4 bits (220), Expect = 7e-18 Identities = 53/105 (50%), Positives = 65/105 (61%), Gaps = 5/105 (4%) Frame = -1 Query: 594 VLKALQELNVYWKKIXH-YNMKCRWSPGFPG-QDNMNHTNYNFIAEPIETD--DVGDKLN 427 VLKAL+ELNV WKK YNMKCRW PGFP D + N++F+ + D D +L Sbjct: 398 VLKALKELNVCWKKNGDCYNMKCRWCPGFPRVSDMLLDANHSFVDDCAIKDNGDANSRLP 457 Query: 426 -LIKFELQLYKTKDEKYLLDLQRASGPHXXXXXXXXXXXXXLRVL 295 +IKFE+QLYKTKD+KYLLD+QR +GP LRVL Sbjct: 458 AVIKFEIQLYKTKDDKYLLDMQRVTGPQLLFLEFCAAFLTNLRVL 502
>BEV1L_BETVE (P43185) Major pollen allergen Bet v 1-L (Bet v I-L)| Length = 159 Score = 31.6 bits (70), Expect = 1.8 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Frame = -1 Query: 534 KCRWSPGFPGQ------DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKD 388 K + GFP + D ++HTN+ + IE VGD L I E+++ T D Sbjct: 55 KINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGDTLEKISNEIKIVATPD 109
>BEV1G_BETVE (P43180) Major pollen allergen Bet v 1-G (Bet v I-G)| Length = 159 Score = 31.6 bits (70), Expect = 1.8 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Frame = -1 Query: 534 KCRWSPGFPGQ------DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKD 388 K + GFP + D ++HTN+ + IE VGD L I E+++ T D Sbjct: 55 KINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGDTLEKISNEIKIVATPD 109
>BEV1D_BETVE (P43177) Major pollen allergen Bet v 1-D/H (Bet v I-D/H)| Length = 159 Score = 31.6 bits (70), Expect = 1.8 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Frame = -1 Query: 534 KCRWSPGFPGQ------DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKD 388 K + GFP + D ++HTN+ + IE VGD L I E+++ T D Sbjct: 55 KINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGDTLEKISNEIKIVATPD 109
>BEV1A_BETVE (P15494) Major pollen allergen Bet v 1-A (Bet v I-A)| Length = 159 Score = 31.2 bits (69), Expect = 2.4 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 6/62 (9%) Frame = -1 Query: 534 KCRWSPGFPGQ------DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKDEKYLL 373 K + GFP + D ++HTN+ + IE +GD L I E+++ T D +L Sbjct: 55 KISFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGDTLEKISNEIKIVATPDGGSIL 114 Query: 372 DL 367 + Sbjct: 115 KI 116
>BEV1J_BETVE (P43183) Major pollen allergen Bet v 1-J (Bet v I-J)| Length = 159 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 6/62 (9%) Frame = -1 Query: 534 KCRWSPGFPGQ------DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKDEKYLL 373 K + GFP + D ++HTN+ + IE VGD L I E+++ T + +L Sbjct: 55 KISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGDTLEKISNEIKIVATPNGGSIL 114 Query: 372 DL 367 + Sbjct: 115 KI 116
>BEV1F_BETVE (P43179) Major pollen allergen Bet v 1-F/I (Bet v I-F/I)| Length = 159 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 6/62 (9%) Frame = -1 Query: 534 KCRWSPGFPGQ------DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKDEKYLL 373 K + GFP + D ++HTN+ + IE VGD L I E+++ T + +L Sbjct: 55 KISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGDTLEKISNEIKIVATPNGGSIL 114 Query: 372 DL 367 + Sbjct: 115 KI 116
>MPAC2_CARBE (P38950) Major pollen allergen Car b 1 isoform 2 (Car b I)| Length = 159 Score = 29.6 bits (65), Expect = 6.9 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = -1 Query: 501 DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQL 403 + ++HTN+ + IE D +GDKL + EL++ Sbjct: 72 EEIDHTNFKYNYTVIEGDVLGDKLEKVSHELKI 104
>HOT13_YEAST (P36078) Helper of Tim protein 13| Length = 116 Score = 29.3 bits (64), Expect = 9.0 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 7/51 (13%) Frame = -1 Query: 213 CGVCRHAELLCAHFGAYKLNLDLASEASKKPVPSGC-------FQLPPKAL 82 CGVCRH E+ A + Y N +L + P GC FQ PP A+ Sbjct: 68 CGVCRH-EMTFAEY--YDYNSNLICPNCRSPFNPGCKLHYHLYFQNPPPAM 115
>METE_LISMF (Q71YY6) 5-methyltetrahydropteroyltriglutamate--homocysteine| methyltransferase (EC 2.1.1.14) (Methionine synthase, vitamin-B12 independent isozyme) (Cobalamin-independent methionine synthase) Length = 765 Score = 29.3 bits (64), Expect = 9.0 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = +1 Query: 475 VIIGMIHIVLTRKARTPSTFHVIVXNFFPVYIQFLQSLE 591 V++G I + K +F V++ F P Y++ L+ LE Sbjct: 157 VLVGPITYLKLGKGSDAKSFEVLLDKFIPAYVEILKELE 195
>MOAR_KLEAE (P54794) Monoamine regulon transcriptional regulator| Length = 227 Score = 29.3 bits (64), Expect = 9.0 Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 4/88 (4%) Frame = +3 Query: 90 LAAAGNNLMALVSCLL---HLPGLNSAYRRRNEHTTAPHVYILHNFDPLEKAYYLHLFRV 260 L A N + CL L L SA R + P YILHN YL F+ Sbjct: 4 LLKASRNDAIIARCLQTISQLIPLTSAVFYRVNNRLKPENYILHNISDNTHQQYLENFQP 63 Query: 261 VQHTFPGHVGIRGLS-AALGRRHIDQER 341 + P H + + AA+ R D+ R Sbjct: 64 LDPLLPSHFSHQNTTVAAMTPRLCDRNR 91
>BEV1E_BETVE (P43178) Major pollen allergen Bet v 1-E (Bet v I-E)| Length = 159 Score = 29.3 bits (64), Expect = 9.0 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = -1 Query: 501 DNMNHTNYNFIAEPIETDDVGDKLNLIKFELQLYKTKDEKYLLDL 367 D ++HTN+ + IE VGD L I E+++ T + +L + Sbjct: 72 DEVDHTNFKYSYSVIEGGPVGDTLEKISNEIKIVATPNGGSILKI 116 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,558,348 Number of Sequences: 219361 Number of extensions: 1731918 Number of successful extensions: 4277 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3910 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4273 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
