| Clone Name | rbaal14h23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009272.1| Triticum aestivum clone wlk8.pk0011.e10:fis, full insert mRNA sequence Length = 1878 Score = 1017 bits (513), Expect = 0.0 Identities = 585/605 (96%), Gaps = 3/605 (0%) Strand = Plus / Minus Query: 12 tatagcatatncagcgaaacatcttacagtatgtgcctgcaataagnaaactattgacaa 71 |||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1793 tatagcatat-cagcgaagcatcttacagtatgtgcctgcaataag-aaactatcgacaa 1736 Query: 72 agttcccatattctgtaaaatgcttggattccttttacataagatggcgcttcatcatgg 131 ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 1735 agttcccatattctgtaaaatgcttggattccttttacatatggtggcgcttcatcatgg 1676 Query: 132 atctattgtttacatggacttgtcctcagttgtgcttcctgtttgcttcctt-gctgttg 190 ||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||| Sbjct: 1675 atctattgtttacatggacttgtcctcagctgtgcttcttgtttgcttcctttgctgttg 1616 Query: 191 aaacacagcagtgcttagttcttgtacttcatggtctctttctcgaatccgattgttggg 250 |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 1615 aaacacagcagttcttagttcttgtacttcatggtctccttctcgaatccaattgttggg 1556 Query: 251 aattgttttgcatattcctccacatcgtggcgaagctttgcaatttcagcttggatgttg 310 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1555 aattgtttcgcatattcctccacatcgtggcgaagctttgcaatttcagcttggatgttg 1496 Query: 311 ctgtcggattgcaaagtggcaacaaagtccttcagtttggtacctgctgctgcagcttta 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1495 ctgtcggattgcaaagtggcaacaaagtccttcagtttggtacctgctgctgcagcttta 1436 Query: 371 accttcaaagccaagttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcc 430 |||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1435 accttcaaggccaagttcactgccgaatcgaagaagtcagcaaccttggcgaagtcctcc 1376 Query: 431 tcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccata 490 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1375 tcaacaaatcctcttgatgtaagtgcgggggttcccatcctgatgcctccgggtaccata 1316 Query: 491 gctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaaacc 550 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1315 gctgaaacatcaccaggaaccgtgttcttgtttgctgcaatatgcacattttctaaaacc 1256 Query: 551 ttctccactcttgaaccatctattccctttttcttgaggttcaccaaaactaaatggtta 610 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1255 ttctccacacgtgaaccatctattccctttttcttgaggttcaccaaaactaaatggtta 1196 Query: 611 tcagt 615 ||||| Sbjct: 1195 tcagt 1191
>ref|XM_469653.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2052 Score = 500 bits (252), Expect = e-138 Identities = 372/412 (90%) Strand = Plus / Minus Query: 204 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 263 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 1675 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1616 Query: 264 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 323 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 1615 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1556 Query: 324 aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 383 ||||||||||||||||||||||||| || || |||||||||| |||||||||||||||| Sbjct: 1555 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1496 Query: 384 agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 443 |||||||||| | ||||||||| || |||||||| || |||||||||||||||||||||| Sbjct: 1495 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 1436 Query: 444 ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 503 |||| || || || ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1435 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 1376 Query: 504 caggaacagtgttcttgtttgctgcaatatgcacattttctaaaaccttctccactcttg 563 ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 1375 caggaactgtgttcttgtttgctgcaatgtgcacgttttctaaaaccttctccactcttg 1316 Query: 564 aaccatctattccctttttcttgaggttcaccaaaactaaatggttatcagt 615 |||||||||| ||||| ||||||| || ||||| ||||||||||| ||||| Sbjct: 1315 aaccatctatgcccttgctcttgagatttaccaacactaaatggttgtcagt 1264 Score = 50.1 bits (25), Expect = 0.009 Identities = 77/92 (83%), Gaps = 3/92 (3%) Strand = Plus / Minus Query: 29 aacatcttacagtatgtgcctgcaataagnaaactattgacaaagttcccatattctgta 88 |||||||||||||| ||| || | ||||| |||||||||||||||| ||| | ||||| Sbjct: 1876 aacatcttacagtaggtgtctacgataag--aactattgacaaagtttccacacgctgta 1819 Query: 89 aaatg-cttggattccttttacataagatggc 119 ||||| | || | |||||||||||||||||| Sbjct: 1818 aaatgccaggggtcccttttacataagatggc 1787
>dbj|AK061913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A08, full insert sequence Length = 1402 Score = 500 bits (252), Expect = e-138 Identities = 372/412 (90%) Strand = Plus / Minus Query: 204 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 263 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 1128 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1069 Query: 264 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 323 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 1068 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1009 Query: 324 aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 383 ||||||||||||||||||||||||| || || |||||||||| |||||||||||||||| Sbjct: 1008 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 949 Query: 384 agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 443 |||||||||| | ||||||||| || |||||||| || |||||||||||||||||||||| Sbjct: 948 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 889 Query: 444 ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 503 |||| || || || ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 888 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 829 Query: 504 caggaacagtgttcttgtttgctgcaatatgcacattttctaaaaccttctccactcttg 563 ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 828 caggaactgtgttcttgtttgctgcaatgtgcacgttttctaaaaccttctccactcttg 769 Query: 564 aaccatctattccctttttcttgaggttcaccaaaactaaatggttatcagt 615 |||||||||| ||||| ||||||| || ||||| ||||||||||| ||||| Sbjct: 768 aaccatctatgcccttgctcttgagatttaccaacactaaatggttgtcagt 717 Score = 50.1 bits (25), Expect = 0.009 Identities = 77/92 (83%), Gaps = 3/92 (3%) Strand = Plus / Minus Query: 29 aacatcttacagtatgtgcctgcaataagnaaactattgacaaagttcccatattctgta 88 |||||||||||||| ||| || | ||||| |||||||||||||||| ||| | ||||| Sbjct: 1329 aacatcttacagtaggtgtctacgataag--aactattgacaaagtttccacacgctgta 1272 Query: 89 aaatgcttggattcc-ttttacataagatggc 119 |||||| || ||| |||||||||||||||| Sbjct: 1271 aaatgccaggggtcccttttacataagatggc 1240
>dbj|AK119226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-H12, full insert sequence Length = 1923 Score = 500 bits (252), Expect = e-138 Identities = 372/412 (90%) Strand = Plus / Minus Query: 204 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 263 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 1598 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1539 Query: 264 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 323 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 1538 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1479 Query: 324 aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 383 ||||||||||||||||||||||||| || || |||||||||| |||||||||||||||| Sbjct: 1478 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1419 Query: 384 agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 443 |||||||||| | ||||||||| || |||||||| || |||||||||||||||||||||| Sbjct: 1418 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 1359 Query: 444 ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 503 |||| || || || ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1358 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 1299 Query: 504 caggaacagtgttcttgtttgctgcaatatgcacattttctaaaaccttctccactcttg 563 ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 1298 caggaactgtgttcttgtttgctgcaatgtgcacgttttctaaaaccttctccactcttg 1239 Query: 564 aaccatctattccctttttcttgaggttcaccaaaactaaatggttatcagt 615 |||||||||| ||||| ||||||| || ||||| ||||||||||| ||||| Sbjct: 1238 aaccatctatgcccttgctcttgagatttaccaacactaaatggttgtcagt 1187 Score = 50.1 bits (25), Expect = 0.009 Identities = 77/92 (83%), Gaps = 3/92 (3%) Strand = Plus / Minus Query: 29 aacatcttacagtatgtgcctgcaataagnaaactattgacaaagttcccatattctgta 88 |||||||||||||| ||| || | ||||| |||||||||||||||| ||| | ||||| Sbjct: 1799 aacatcttacagtaggtgtctacgataag--aactattgacaaagtttccacacgctgta 1742 Query: 89 aaatg-cttggattccttttacataagatggc 119 ||||| | || | |||||||||||||||||| Sbjct: 1741 aaatgccaggggtcccttttacataagatggc 1710
>dbj|AK100404.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086P20, full insert sequence Length = 1976 Score = 500 bits (252), Expect = e-138 Identities = 372/412 (90%) Strand = Plus / Minus Query: 204 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 263 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 1599 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1540 Query: 264 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 323 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 1539 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1480 Query: 324 aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 383 ||||||||||||||||||||||||| || || |||||||||| |||||||||||||||| Sbjct: 1479 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1420 Query: 384 agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 443 |||||||||| | ||||||||| || |||||||| || |||||||||||||||||||||| Sbjct: 1419 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 1360 Query: 444 ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 503 |||| || || || ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1359 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 1300 Query: 504 caggaacagtgttcttgtttgctgcaatatgcacattttctaaaaccttctccactcttg 563 ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 1299 caggaactgtgttcttgtttgctgcaatgtgcacgttttctaaaaccttctccactcttg 1240 Query: 564 aaccatctattccctttttcttgaggttcaccaaaactaaatggttatcagt 615 |||||||||| ||||| ||||||| || ||||| ||||||||||| ||||| Sbjct: 1239 aaccatctatgcccttgctcttgagatttaccaacactaaatggttgtcagt 1188 Score = 50.1 bits (25), Expect = 0.009 Identities = 77/92 (83%), Gaps = 3/92 (3%) Strand = Plus / Minus Query: 29 aacatcttacagtatgtgcctgcaataagnaaactattgacaaagttcccatattctgta 88 |||||||||||||| ||| || | ||||| |||||||||||||||| ||| | ||||| Sbjct: 1800 aacatcttacagtaggtgtctacgataag--aactattgacaaagtttccacacgctgta 1743 Query: 89 aaatg-cttggattccttttacataagatggc 119 ||||| | || | |||||||||||||||||| Sbjct: 1742 aaatgccaggggtcccttttacataagatggc 1711
>dbj|AK060674.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A01, full insert sequence Length = 1844 Score = 500 bits (252), Expect = e-138 Identities = 372/412 (90%) Strand = Plus / Minus Query: 204 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 263 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 1591 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1532 Query: 264 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 323 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 1531 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1472 Query: 324 aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 383 ||||||||||||||||||||||||| || || |||||||||| |||||||||||||||| Sbjct: 1471 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1412 Query: 384 agttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctc 443 |||||||||| | ||||||||| || |||||||| || |||||||||||||||||||||| Sbjct: 1411 agttcactgctgcatcgaagaaatcagcaaccttagcaaagtcctcctcaacaaatcctc 1352 Query: 444 ttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatcac 503 |||| || || || ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1351 ttgaggtcagtgctggggttcccatcctgatgcctcctggtaccatagctgaaacatcac 1292 Query: 504 caggaacagtgttcttgtttgctgcaatatgcacattttctaaaaccttctccactcttg 563 ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 1291 caggaactgtgttcttgtttgctgcaatgtgcacgttttctaaaaccttctccactcttg 1232 Query: 564 aaccatctattccctttttcttgaggttcaccaaaactaaatggttatcagt 615 |||||||||| ||||| ||||||| || ||||| ||||||||||| ||||| Sbjct: 1231 aaccatctatgcccttgctcttgagatttaccaacactaaatggttgtcagt 1180 Score = 50.1 bits (25), Expect = 0.009 Identities = 77/92 (83%), Gaps = 3/92 (3%) Strand = Plus / Minus Query: 29 aacatcttacagtatgtgcctgcaataagnaaactattgacaaagttcccatattctgta 88 |||||||||||||| ||| || | ||||| |||||||||||||||| ||| | ||||| Sbjct: 1792 aacatcttacagtaggtgtctacgataag--aactattgacaaagtttccacacgctgta 1735 Query: 89 aaatg-cttggattccttttacataagatggc 119 ||||| | || | |||||||||||||||||| Sbjct: 1734 aaatgccaggggtcccttttacataagatggc 1703
>gb|AY105738.1| Zea mays PCO070960 mRNA sequence Length = 1476 Score = 424 bits (214), Expect = e-115 Identities = 365/414 (88%), Gaps = 6/414 (1%) Strand = Plus / Minus Query: 205 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcata 264 |||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| | Sbjct: 1231 ttagttcttgtatttcatggtctctttctcaaatccaattgttgggaattgttttgcaaa 1172 Query: 265 ttcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgcaa 324 |||||| ||||| ||||||||||||||||| ||| |||||||| || || |||||||| Sbjct: 1171 ttcctctacatcatggcgaagctttgcaatctcaacttggatg---ctatcagattgcaa 1115 Query: 325 agtggcaacaaagtccttcagtttggt---acctgctgctgcagctttaaccttcaaagc 381 ||||||||||||||||||||| || || ||||| | |||||| |||| |||||| || Sbjct: 1114 agtggcaacaaagtccttcagctttgttccacctgtcgttgcagccttaatcttcaaggc 1055 Query: 382 caagttcactgccgaatcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcc 441 || |||||||| | ||||||||| || ||||| || ||||| || || ||||||||||| Sbjct: 1054 cagattcactgctgcatcgaagaagtcagcaactttagcgaaatcttcttcaacaaatcc 995 Query: 442 tcttgatgtaagcgcgggggttcccatcctgatgcctccgggtaccatagctgaaacatc 501 ||| || ||||| || ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 994 tctcgacgtaagggctggggttcccatcctgatgcctcctggcaccatagctgaaacatc 935 Query: 502 accaggaacagtgttcttgtttgctgcaatatgcacattttctaaaaccttctccactct 561 ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 934 accaggaactgtgttcttgtttgctgcaatatgcacactttctaaaaccttctccaccct 875 Query: 562 tgaaccatctattccctttttcttgaggttcaccaaaactaaatggttatcagt 615 |||||||||||| ||||| |||||||| ||||||| |||||||||||| ||||| Sbjct: 874 tgaaccatctatccccttattcttgagattcaccagaactaaatggttgtcagt 821
>gb|AF439728.1|AF439728 Zea mays serine hydroxymethyltransferase mRNA, partial cds Length = 1028 Score = 234 bits (118), Expect = 3e-58 Identities = 148/158 (93%) Strand = Plus / Minus Query: 458 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 517 ||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| Sbjct: 1025 ggggttcccatcctgatgcctcctggcaccatagctgaaacatcaccaggaactgtgttc 966 Query: 518 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 577 ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||| Sbjct: 965 ttgtttgctgcaatatgcacactttctaaaaccttctccacccttgaaccatctatcccc 906 Query: 578 tttttcttgaggttcaccaaaactaaatggttatcagt 615 || |||||||| ||||||| |||||||||||| ||||| Sbjct: 905 ttattcttgagattcaccagaactaaatggttgtcagt 868
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 188 bits (95), Expect = 1e-44 Identities = 110/115 (95%) Strand = Plus / Minus Query: 464 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgttt 523 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 30010834 cccatcctgatgcctcctggtaccatagctgaaacatcaccaggaactgtgttcttgttt 30010775 Query: 524 gctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccct 578 |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 30010774 gctgcaatgtgcacgttttctaaaaccttctccactcttgaaccatctatgccct 30010720 Score = 176 bits (89), Expect = 6e-41 Identities = 131/145 (90%) Strand = Plus / Minus Query: 204 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 263 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 30011320 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 30011261 Query: 264 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 323 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 30011260 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 30011201 Query: 324 aagtggcaacaaagtccttcagttt 348 ||||||||||||||||||||||||| Sbjct: 30011200 aagtggcaacaaagtccttcagttt 30011176 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Minus Query: 357 ctgctgcagctttaaccttcaaagccaagttcactgccgaatcgaagaattcggcaacct 416 |||||||||| |||||||||||||||||||||||||| | ||||||||| || ||||||| Sbjct: 30011026 ctgctgcagccttaaccttcaaagccaagttcactgctgcatcgaagaaatcagcaacct 30010967 Query: 417 tggcgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcc 465 | || |||||||||||||||||||||||||| || || || |||||||| Sbjct: 30010966 tagcaaagtcctcctcaacaaatcctcttgaggtcagtgctggggttcc 30010918 Score = 50.1 bits (25), Expect = 0.009 Identities = 77/92 (83%), Gaps = 3/92 (3%) Strand = Plus / Minus Query: 29 aacatcttacagtatgtgcctgcaataagnaaactattgacaaagttcccatattctgta 88 |||||||||||||| ||| || | ||||| |||||||||||||||| ||| | ||||| Sbjct: 30011757 aacatcttacagtaggtgtctacgataag--aactattgacaaagtttccacacgctgta 30011700 Query: 89 aaatgcttggattcc-ttttacataagatggc 119 |||||| || ||| |||||||||||||||| Sbjct: 30011699 aaatgccaggggtcccttttacataagatggc 30011668
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 188 bits (95), Expect = 1e-44 Identities = 110/115 (95%) Strand = Plus / Plus Query: 464 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgttt 523 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 96917 cccatcctgatgcctcctggtaccatagctgaaacatcaccaggaactgtgttcttgttt 96976 Query: 524 gctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccct 578 |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 96977 gctgcaatgtgcacgttttctaaaaccttctccactcttgaaccatctatgccct 97031 Score = 176 bits (89), Expect = 6e-41 Identities = 131/145 (90%) Strand = Plus / Plus Query: 204 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 263 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 96431 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 96490 Query: 264 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 323 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 96491 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 96550 Query: 324 aagtggcaacaaagtccttcagttt 348 ||||||||||||||||||||||||| Sbjct: 96551 aagtggcaacaaagtccttcagttt 96575 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Plus Query: 357 ctgctgcagctttaaccttcaaagccaagttcactgccgaatcgaagaattcggcaacct 416 |||||||||| |||||||||||||||||||||||||| | ||||||||| || ||||||| Sbjct: 96725 ctgctgcagccttaaccttcaaagccaagttcactgctgcatcgaagaaatcagcaacct 96784 Query: 417 tggcgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcc 465 | || |||||||||||||||||||||||||| || || || |||||||| Sbjct: 96785 tagcaaagtcctcctcaacaaatcctcttgaggtcagtgctggggttcc 96833 Score = 50.1 bits (25), Expect = 0.009 Identities = 77/92 (83%), Gaps = 3/92 (3%) Strand = Plus / Plus Query: 29 aacatcttacagtatgtgcctgcaataagnaaactattgacaaagttcccatattctgta 88 |||||||||||||| ||| || | ||||| |||||||||||||||| ||| | ||||| Sbjct: 95994 aacatcttacagtaggtgtctacgataag--aactattgacaaagtttccacacgctgta 96051 Query: 89 aaatg-cttggattccttttacataagatggc 119 ||||| | || | |||||||||||||||||| Sbjct: 96052 aaatgccaggggtcccttttacataagatggc 96083
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 188 bits (95), Expect = 1e-44 Identities = 110/115 (95%) Strand = Plus / Minus Query: 464 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgttt 523 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 30102256 cccatcctgatgcctcctggtaccatagctgaaacatcaccaggaactgtgttcttgttt 30102197 Query: 524 gctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccct 578 |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 30102196 gctgcaatgtgcacgttttctaaaaccttctccactcttgaaccatctatgccct 30102142 Score = 176 bits (89), Expect = 6e-41 Identities = 131/145 (90%) Strand = Plus / Minus Query: 204 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 263 |||||||||||||||||||||| |||||||| || || ||||| ||||| |||||||||| Sbjct: 30102742 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 30102683 Query: 264 attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 323 ||||||||||||| |||||||| |||||||| || | ||| |||||||| || ||||||| Sbjct: 30102682 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 30102623 Query: 324 aagtggcaacaaagtccttcagttt 348 ||||||||||||||||||||||||| Sbjct: 30102622 aagtggcaacaaagtccttcagttt 30102598 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Minus Query: 357 ctgctgcagctttaaccttcaaagccaagttcactgccgaatcgaagaattcggcaacct 416 |||||||||| |||||||||||||||||||||||||| | ||||||||| || ||||||| Sbjct: 30102448 ctgctgcagccttaaccttcaaagccaagttcactgctgcatcgaagaaatcagcaacct 30102389 Query: 417 tggcgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcc 465 | || |||||||||||||||||||||||||| || || || |||||||| Sbjct: 30102388 tagcaaagtcctcctcaacaaatcctcttgaggtcagtgctggggttcc 30102340 Score = 50.1 bits (25), Expect = 0.009 Identities = 77/92 (83%), Gaps = 3/92 (3%) Strand = Plus / Minus Query: 29 aacatcttacagtatgtgcctgcaataagnaaactattgacaaagttcccatattctgta 88 |||||||||||||| ||| || | ||||| |||||||||||||||| ||| | ||||| Sbjct: 30103179 aacatcttacagtaggtgtctacgataag--aactattgacaaagtttccacacgctgta 30103122 Query: 89 aaatg-cttggattccttttacataagatggc 119 ||||| | || | |||||||||||||||||| Sbjct: 30103121 aaatgccaggggtcccttttacataagatggc 30103090
>ref|NM_180750.1| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780 transcript variant AT5G26780.2 mRNA, complete cds Length = 1966 Score = 167 bits (84), Expect = 5e-38 Identities = 162/188 (86%) Strand = Plus / Minus Query: 428 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 487 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 1483 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1424 Query: 488 atagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaa 547 || || |||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 1423 atggcagaaacatcaccaggaacagtattcttgtttgctgcaatatgtactaattctaat 1364 Query: 548 accttctccactcttgaaccatctattccctttttcttgaggttcaccaaaactaaatgg 607 || || ||||||||||| |||||||||||||| || || || ||||||||||||||||| Sbjct: 1363 actttttccactcttgatccatctattcccttgtttttcagattcaccaaaactaaatga 1304 Query: 608 ttatcagt 615 |||||||| Sbjct: 1303 ttatcagt 1296 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 219 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 267 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1692 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1644
>ref|NM_122560.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780 transcript variant AT5G26780.3 mRNA, complete cds Length = 2072 Score = 167 bits (84), Expect = 5e-38 Identities = 162/188 (86%) Strand = Plus / Minus Query: 428 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 487 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 1483 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1424 Query: 488 atagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaa 547 || || |||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 1423 atggcagaaacatcaccaggaacagtattcttgtttgctgcaatatgtactaattctaat 1364 Query: 548 accttctccactcttgaaccatctattccctttttcttgaggttcaccaaaactaaatgg 607 || || ||||||||||| |||||||||||||| || || || ||||||||||||||||| Sbjct: 1363 actttttccactcttgatccatctattcccttgtttttcagattcaccaaaactaaatga 1304 Query: 608 ttatcagt 615 |||||||| Sbjct: 1303 ttatcagt 1296 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 219 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 267 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1692 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1644
>ref|NM_180749.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780 transcript variant AT5G26780.1 mRNA, complete cds Length = 1962 Score = 167 bits (84), Expect = 5e-38 Identities = 162/188 (86%) Strand = Plus / Minus Query: 428 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 487 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 1435 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1376 Query: 488 atagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaa 547 || || |||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 1375 atggcagaaacatcaccaggaacagtattcttgtttgctgcaatatgtactaattctaat 1316 Query: 548 accttctccactcttgaaccatctattccctttttcttgaggttcaccaaaactaaatgg 607 || || ||||||||||| |||||||||||||| || || || ||||||||||||||||| Sbjct: 1315 actttttccactcttgatccatctattcccttgtttttcagattcaccaaaactaaatga 1256 Query: 608 ttatcagt 615 |||||||| Sbjct: 1255 ttatcagt 1248 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 219 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 267 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1644 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1596
>gb|BT001097.1| Arabidopsis thaliana clone C104687 (D) putative glycine hydroxymethyltransferase (At5g26780) mRNA, complete cds Length = 1633 Score = 167 bits (84), Expect = 5e-38 Identities = 162/188 (86%) Strand = Plus / Minus Query: 428 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 487 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 1379 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1320 Query: 488 atagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaa 547 || || |||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 1319 atggcagaaacatcaccaggaacagtattcttgtttgctgcaatatgtactaattctaat 1260 Query: 548 accttctccactcttgaaccatctattccctttttcttgaggttcaccaaaactaaatgg 607 || || ||||||||||| |||||||||||||| || || || ||||||||||||||||| Sbjct: 1259 actttttccactcttgatccatctattcccttgtttttcagattcaccaaaactaaatga 1200 Query: 608 ttatcagt 615 |||||||| Sbjct: 1199 ttatcagt 1192 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 219 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 267 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1588 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1540
>dbj|AK220785.1| Arabidopsis thaliana mRNA for glycine hydroxymethyltransferase -like protein, complete cds, clone: RAFL22-26-M08 Length = 909 Score = 167 bits (84), Expect = 5e-38 Identities = 162/188 (86%) Strand = Plus / Minus Query: 428 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 487 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 343 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 284 Query: 488 atagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaa 547 || || |||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 283 atggcagaaacatcaccaggaacagtattcttgtttgctgcaatatgtactaattctaat 224 Query: 548 accttctccactcttgaaccatctattccctttttcttgaggttcaccaaaactaaatgg 607 || || ||||||||||| |||||||||||||| || || || ||||||||||||||||| Sbjct: 223 actttttccactcttgatccatctattcccttgtttttcagattcaccaaaactaaatga 164 Query: 608 ttatcagt 615 |||||||| Sbjct: 163 ttatcagt 156 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 219 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 267 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 552 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 504
>emb|BX830710.1|CNS09YQU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZG06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1960 Score = 167 bits (84), Expect = 5e-38 Identities = 162/188 (86%) Strand = Plus / Minus Query: 428 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 487 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 1429 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1370 Query: 488 atagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaa 547 || || |||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 1369 atggcagaaacatcaccaggaacagtattcttgtttgctgcaatatgtactaattctaat 1310 Query: 548 accttctccactcttgaaccatctattccctttttcttgaggttcaccaaaactaaatgg 607 || || ||||||||||| |||||||||||||| || || || ||||||||||||||||| Sbjct: 1309 actttttccactcttgatccatctattcccttgtttttcagattcaccaaaactaaatga 1250 Query: 608 ttatcagt 615 |||||||| Sbjct: 1249 ttatcagt 1242 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 219 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 267 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1639 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1591
>gb|BT001113.1| Arabidopsis thaliana clone C104687 (D) putative glycine hydroxymethyltransferase (At5g26780) mRNA, complete cds Length = 1633 Score = 167 bits (84), Expect = 5e-38 Identities = 162/188 (86%) Strand = Plus / Minus Query: 428 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 487 ||||||| |||||||||||||| || || || |||||||| | |||||| ||||| ||| Sbjct: 1379 tcctcaatgaatcctcttgatgtgagggctggtgttcccatacggatgccaccgggaacc 1320 Query: 488 atagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaa 547 || || |||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 1319 atggcagaaacatcaccaggaacagtattcttgtttgctgcaatatgtactaattctaat 1260 Query: 548 accttctccactcttgaaccatctattccctttttcttgaggttcaccaaaactaaatgg 607 || || ||||||||||| |||||||||||||| || || || ||||||||||||||||| Sbjct: 1259 actttttccactcttgatccatctattcccttgtttttcagattcaccaaaactaaatga 1200 Query: 608 ttatcagt 615 |||||||| Sbjct: 1199 ttatcagt 1192 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 219 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 267 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1588 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1540
>gb|AY035117.1| Arabidopsis thaliana putative glycine hydroxymethyltransferase (At5g26780) mRNA, complete cds Length = 1933 Score = 159 bits (80), Expect = 1e-35 Identities = 161/188 (85%) Strand = Plus / Minus Query: 428 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 487 ||||||| |||||||||||||| || || || |||||||| |||||| ||||| ||| Sbjct: 1434 tcctcaatgaatcctcttgatgtgagggctggtgttcccatatggatgccaccgggaacc 1375 Query: 488 atagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaa 547 || || |||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 1374 atggcagaaacatcaccaggaacagtattcttgtttgctgcaatatgtactaattctaat 1315 Query: 548 accttctccactcttgaaccatctattccctttttcttgaggttcaccaaaactaaatgg 607 || || ||||||||||| |||||||||||||| || || || ||||||||||||||||| Sbjct: 1314 actttttccactcttgatccatctattcccttgtttttcagattcaccaaaactaaatga 1255 Query: 608 ttatcagt 615 |||||||| Sbjct: 1254 ttatcagt 1247 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 219 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 267 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 1643 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1595
>gb|M87649.1|PEASHMTA Pisum sativum serine hydroxymethyltransferase mRNA, complete cds Length = 1803 Score = 119 bits (60), Expect = 1e-23 Identities = 162/196 (82%) Strand = Plus / Minus Query: 420 cgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctc 479 |||| ||||||||||||||||| ||||| |||||||| || ||||||||||||||||| | Sbjct: 1363 cgaaatcctcctcaacaaatccccttgaagtaagcgcaggagttcccatcctgatgccac 1304 Query: 480 cgggtaccatagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacat 539 | || |||||||| || ||||| || ||||| ||||| || || || |||||||| || Sbjct: 1303 caggaaccatagcagacacatctcctggaactgtgtttttattagcagcaatatgtacta 1244 Query: 540 tttctaaaaccttctccactcttgaaccatctattccctttttcttgaggttcaccaaaa 599 ||| || || ||||| ||||| || ||||| || ||||| ||||| || |||||||||| Sbjct: 1243 attccaacactttctcaactctggacccatcaatacccttgttcttcagattcaccaaaa 1184 Query: 600 ctaaatggttatcagt 615 ||||||| || ||||| Sbjct: 1183 ctaaatgattctcagt 1168 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 212 ttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctcc 271 |||||||||||||| |||| || || || || ||||| |||||||||||| | ||||| Sbjct: 1571 ttgtacttcatggttgctttttcaaaaccaatggttggaaattgttttgcaaactcctca 1512 Query: 272 acatc 276 ||||| Sbjct: 1511 acatc 1507
>gb|AF007270.1|F2P16 Arabidopsis thaliana BAC F2P16, complete sequence Length = 110946 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 472 gatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgtttgctgcaat 531 |||||| ||||| ||||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 22521 gatgccaccgggaaccatggcagaaacatcaccaggaacagtattcttgtttgctgcaat 22462 Query: 532 atgcacattttctaaaaccttctccactcttgaaccatctattccct 578 ||| || |||||| || || ||||||||||| ||||||||||||| Sbjct: 22461 atgtactaattctaatactttttccactcttgatccatctattccct 22415 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 219 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 267 |||| |||||||||||||| || || ||||||||||| || |||||||| Sbjct: 23145 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 23097 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 590 ttcaccaaaactaaatggttatcagt 615 ||||||||||||||||| |||||||| Sbjct: 22075 ttcaccaaaactaaatgattatcagt 22050
>emb|Z25860.1|FPGHMT2 Flaveria pringlei mRNA for glycine hydroxymethyltransferase Length = 1779 Score = 101 bits (51), Expect = 3e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 207 agttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatatt 266 |||| ||||| |||||||| |||||||| || |||||||||||||||||||| ||||| | Sbjct: 1576 agtttttgtatttcatggtttctttctcaaacccgattgttgggaattgtttggcatact 1517 Query: 267 cctccacatcgtggcgaagctttgcaatttc 297 ||||||| |||||||| ||||||| |||||| Sbjct: 1516 cctccacgtcgtggcgtagctttgaaatttc 1486 Score = 97.6 bits (49), Expect = 4e-17 Identities = 133/161 (82%) Strand = Plus / Minus Query: 425 tcctcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggt 484 ||||| ||||||||||| || || || || || ||||||||||| |||||||| || || Sbjct: 1361 tcctcttcaacaaatcccctagaagtgagagcaggggttcccattctgatgccaccagga 1302 Query: 485 accatagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttct 544 ||||| || || |||||||||||||||||||| || || |||||||| || ||| ||| Sbjct: 1301 accatggcagacacatcaccaggaacagtgtttttattggctgcaatgtgaacagcttcc 1242 Query: 545 aaaaccttctccactcttgaaccatctattccctttttctt 585 || ||||| || || ||||||||||| |||||||| ||||| Sbjct: 1241 aacaccttttcaacccttgaaccatcaattcccttattctt 1201
>emb|Z25859.1|FPGHMT1 Flaveria pringlei mRNA for glycine hydroxymethyltransferase Length = 1746 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 204 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 263 ||||||| ||||| |||||||| |||||||| ||||||||||| ||||||||||| || | Sbjct: 1588 cttagtttttgtatttcatggtttctttctcaaatccgattgtcgggaattgtttcgcgt 1529 Query: 264 attcctccacatcgtggcgaagctttgcaatttcagcttggatg 307 |||||||||| || ||||| ||||||| ||||| | ||||||| Sbjct: 1528 attcctccacgtcatggcgtagctttgagatttctgattggatg 1485 Score = 89.7 bits (45), Expect = 1e-14 Identities = 162/201 (80%) Strand = Plus / Minus Query: 409 ggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcgggggttcccat 468 |||||| || || |||||||| ||||||||||| || || || || || ||||||||||| Sbjct: 1386 ggcaactttagcaaagtcctcttcaacaaatcccctagaggtgagagcaggggttcccat 1327 Query: 469 cctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgtttgctgc 528 |||||||| || || ||||| || || |||||||||||||||||||| || || ||||| Sbjct: 1326 tctgatgccaccaggaaccatggcagagacatcaccaggaacagtgtttttattggctgc 1267 Query: 529 aatatgcacattttctaaaaccttctccactcttgaaccatctattccctttttcttgag 588 ||| || ||| || || ||||| || || |||||||||| |||||||| || || | Sbjct: 1266 aatgtgaacagcctccaacaccttttcaacctttgaaccatcaattcccttatttttcaa 1207 Query: 589 gttcaccaaaactaaatggtt 609 || ||||||||||| ||||| Sbjct: 1206 attaaccaaaactaagtggtt 1186
>gb|BT013569.1| Lycopersicon esculentum clone 132307R, mRNA sequence Length = 1923 Score = 85.7 bits (43), Expect = 2e-13 Identities = 127/155 (81%) Strand = Plus / Minus Query: 425 tcctcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggt 484 |||||||||||||| ||||| || || || || ||||| ||||| | ||||| || ||| Sbjct: 1376 tcctcctcaacaaaacctctagaagtgagagctggggtgcccatgcgaatgccaccaggt 1317 Query: 485 accatagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttct 544 ||||| || || ||||||||||| ||||| ||||| || |||||||||||||| ||| Sbjct: 1316 accatggcagatacatcaccaggcacagtattcttattggctgcaatatgcaccgactct 1257 Query: 545 aaaaccttctccactcttgaaccatctattccctt 579 ||||||||||| ||||| || ||||| || ||||| Sbjct: 1256 aaaaccttctcaactctagatccatcaataccctt 1222 Score = 44.1 bits (22), Expect = 0.54 Identities = 52/62 (83%) Strand = Plus / Minus Query: 209 ttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcc 268 |||||||| ||||| || ||||||||||| || | || ||||||||||| ||||| ||| Sbjct: 1592 ttcttgtatttcattgtttctttctcgaaaccaacagtagggaattgtttggcatagtcc 1533 Query: 269 tc 270 || Sbjct: 1532 tc 1531
>emb|Z25863.1|STGHMT S.tuberosum mRNA for glycine hydroxymethyltransferase Length = 1745 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Minus Query: 204 cttagttcttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 263 ||||||| |||||||||||||| |||||||| || || ||||| ||||| || || |||| Sbjct: 1563 cttagtttttgtacttcatggtttctttctcaaacccaattgtagggaactgcttagcat 1504 Query: 264 attcctccacatcgtggcgaagctttgcaatttcag 299 | ||||||||||| || || || ||||||||||||| Sbjct: 1503 actcctccacatcatgacggagttttgcaatttcag 1468 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Minus Query: 461 gttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttg 520 |||||||| |||||||| || || ||||| || || ||||| |||||||| ||||||||| Sbjct: 1306 gttcccattctgatgccaccagggaccatggcagatacatctccaggaacggtgttcttg 1247 Query: 521 tttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattcccttt 580 || ||||||||||| ||| ||| || || || || || || |||||||| || ||||| Sbjct: 1246 ttggctgcaatatgtacagcttccaagactttttcaaccctggaaccatcaatacccttg 1187 Query: 581 ttcttgaggttcaccaaaac 600 || || | |||||||||||| Sbjct: 1186 tttttcatgttcaccaaaac 1167
>ref|NM_119954.2| Arabidopsis thaliana SHM1 (SERINE HYDROXYMETHYLTRANSFERASE 1); glycine hydroxymethyltransferase AT4G37930 (SHM1) mRNA, complete cds Length = 1822 Score = 75.8 bits (38), Expect = 2e-10 Identities = 146/182 (80%) Strand = Plus / Minus Query: 398 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 457 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1484 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1425 Query: 458 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 517 || || ||||| ||||| || || || ||||| || |||||||| |||||||||||||| Sbjct: 1424 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1365 Query: 518 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 577 ||||| | |||||| || ||| ||| || || ||||| ||||| || ||||| |||||| Sbjct: 1364 ttgttggatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccc 1305 Query: 578 tt 579 || Sbjct: 1304 tt 1303 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 205 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 252 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1677 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1630
>emb|AJ271726.1|ATH271726 Arabidopsis thaliana mRNA for serine hydroxymethyl transferase (shm1 gene) Length = 1797 Score = 75.8 bits (38), Expect = 2e-10 Identities = 146/182 (80%) Strand = Plus / Minus Query: 398 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 457 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1460 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1401 Query: 458 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 517 || || ||||| ||||| || || || ||||| || |||||||| |||||||||||||| Sbjct: 1400 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1341 Query: 518 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 577 ||||| | |||||| || ||| ||| || || ||||| ||||| || ||||| |||||| Sbjct: 1340 ttgttggatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccc 1281 Query: 578 tt 579 || Sbjct: 1280 tt 1279 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 205 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 252 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1653 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1606
>gb|AY070726.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1775 Score = 75.8 bits (38), Expect = 2e-10 Identities = 146/182 (80%) Strand = Plus / Minus Query: 398 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 457 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1468 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1409 Query: 458 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 517 || || ||||| ||||| || || || ||||| || |||||||| |||||||||||||| Sbjct: 1408 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1349 Query: 518 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 577 ||||| | |||||| || ||| ||| || || ||||| ||||| || ||||| |||||| Sbjct: 1348 ttgttggatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccc 1289 Query: 578 tt 579 || Sbjct: 1288 tt 1287 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 205 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 252 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1661 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1614
>gb|AY057645.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1716 Score = 75.8 bits (38), Expect = 2e-10 Identities = 146/182 (80%) Strand = Plus / Minus Query: 398 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 457 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1414 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1355 Query: 458 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 517 || || ||||| ||||| || || || ||||| || |||||||| |||||||||||||| Sbjct: 1354 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1295 Query: 518 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 577 ||||| | |||||| || ||| ||| || || ||||| ||||| || ||||| |||||| Sbjct: 1294 ttgttggatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccc 1235 Query: 578 tt 579 || Sbjct: 1234 tt 1233 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 205 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 252 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1607 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1560
>gb|AF428388.1|AF428388 Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1730 Score = 75.8 bits (38), Expect = 2e-10 Identities = 146/182 (80%) Strand = Plus / Minus Query: 398 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 457 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1415 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1356 Query: 458 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 517 || || ||||| ||||| || || || ||||| || |||||||| |||||||||||||| Sbjct: 1355 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1296 Query: 518 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 577 ||||| | |||||| || ||| ||| || || ||||| ||||| || ||||| |||||| Sbjct: 1295 ttgttggatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccc 1236 Query: 578 tt 579 || Sbjct: 1235 tt 1234 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 205 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 252 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1608 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1561
>gb|AY054254.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1770 Score = 75.8 bits (38), Expect = 2e-10 Identities = 146/182 (80%) Strand = Plus / Minus Query: 398 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 457 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1468 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1409 Query: 458 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 517 || || ||||| ||||| || || || ||||| || |||||||| |||||||||||||| Sbjct: 1408 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1349 Query: 518 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 577 ||||| | |||||| || ||| ||| || || ||||| ||||| || ||||| |||||| Sbjct: 1348 ttgttggatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccc 1289 Query: 578 tt 579 || Sbjct: 1288 tt 1287 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 205 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 252 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1661 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1614
>gb|BT006353.1| Arabidopsis thaliana At4g37930/F20D10_50 gene, complete cds Length = 1554 Score = 75.8 bits (38), Expect = 2e-10 Identities = 146/182 (80%) Strand = Plus / Minus Query: 398 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 457 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1361 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1302 Query: 458 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 517 || || ||||| ||||| || || || ||||| || |||||||| |||||||||||||| Sbjct: 1301 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1242 Query: 518 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 577 ||||| | |||||| || ||| ||| || || ||||| ||||| || ||||| |||||| Sbjct: 1241 ttgttggatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccc 1182 Query: 578 tt 579 || Sbjct: 1181 tt 1180 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 205 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 252 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1554 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1507
>emb|BX828432.1|CNS0A3VV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH89ZH08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1771 Score = 75.8 bits (38), Expect = 2e-10 Identities = 146/182 (80%) Strand = Plus / Minus Query: 398 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 457 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1457 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1398 Query: 458 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 517 || || ||||| ||||| || || || ||||| || |||||||| |||||||||||||| Sbjct: 1397 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1338 Query: 518 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 577 ||||| | |||||| || ||| ||| || || ||||| ||||| || ||||| |||||| Sbjct: 1337 ttgttggatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccc 1278 Query: 578 tt 579 || Sbjct: 1277 tt 1276 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 205 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 252 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1650 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1603
>gb|AY089107.1| Arabidopsis thaliana clone 33799 mRNA, complete sequence Length = 1725 Score = 75.8 bits (38), Expect = 2e-10 Identities = 146/182 (80%) Strand = Plus / Minus Query: 398 tcgaagaattcggcaaccttggcgaagtcctcctcaacaaatcctcttgatgtaagcgcg 457 |||||| |||| || || ||||| ||||| ||||||||||| ||||| || || || || Sbjct: 1423 tcgaagtattcagctactttggcaaagtcttcctcaacaaagcctctggaagtgagagca 1364 Query: 458 ggggttcccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttc 517 || || ||||| ||||| || || || ||||| || |||||||| |||||||||||||| Sbjct: 1363 ggagtacccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgttt 1304 Query: 518 ttgtttgctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccc 577 ||||| | |||||| || ||| ||| || || ||||| ||||| || ||||| |||||| Sbjct: 1303 ttgttggatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccc 1244 Query: 578 tt 579 || Sbjct: 1243 tt 1242 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 205 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 252 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1616 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1569
>gb|DQ139269.1| Medicago truncatula serine hydroxymethyltransferase mRNA, complete cds Length = 1524 Score = 73.8 bits (37), Expect = 6e-10 Identities = 153/189 (80%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 428 tcctcaacaaatcctcttgatgtaagcgcgggggttcccatcctgatgcctccgggtacc 487 ||||||||||| || || |||||||| || || |||||||| ||||| ||||| || ||| Sbjct: 1301 tcctcaacaaaacccctagatgtaagagcaggagttcccattctgatccctccaggaacc 1242 Query: 488 atagctgaaacatcaccaggaacagtgttcttgtttgctgcaatatgcacattttctaaa 547 || || || ||||| || ||||||||||| || || || || ||||| || |||||| Sbjct: 1241 attgcagacacatctcctggaacagtgtttttattggcagctatatgaactgattctaac 1182 Query: 548 accttctccactcttgaaccatctattccctt-tttcttgaggttcaccaaaactaaatg 606 |||||||| || ||||||||||| || ||||| |||||| | ||| ||||| || ||||| Sbjct: 1181 accttctcaacccttgaaccatcaatgcccttgtttctt-aagtttaccaacaccaaatg 1123 Query: 607 gttatcagt 615 ||| ||||| Sbjct: 1122 gttctcagt 1114
>emb|AL161592.2|ATCHRIV88 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 88 Length = 198493 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 205 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 252 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 134324 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 134371 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Plus Query: 464 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgttt 523 ||||| ||||| || || || ||||| || |||||||| |||||||||||||| ||||| Sbjct: 134747 cccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgtttttgttg 134806 Query: 524 gctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccct 578 | |||||| || ||| ||| || || ||||| ||||| || ||||| ||||||| Sbjct: 134807 gatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccct 134861
>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone F20D10 (ESSA project) Length = 147215 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 205 ttagttcttgtacttcatggtctctttctcgaatccgattgttgggaa 252 ||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 19909 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 19956 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Plus Query: 464 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgttt 523 ||||| ||||| || || || ||||| || |||||||| |||||||||||||| ||||| Sbjct: 20332 cccattctgattccaccaggaaccatggcagaaacatctccaggaacagtgtttttgttg 20391 Query: 524 gctgcaatatgcacattttctaaaaccttctccactcttgaaccatctattccct 578 | |||||| || ||| ||| || || ||||| ||||| || ||||| ||||||| Sbjct: 20392 gatgcaatgtgaacagcttccaacactttctcaactctagatccatcaattccct 20446
>dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11E23, TM0557 Length = 87695 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 212 ttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctcc 271 ||||||||||| || | ||||| || || || ||||| || ||||| ||||| ||||| Sbjct: 7579 ttgtacttcattgttgccttctcaaaaccaatggttggaaactgtttcgcatactcctca 7520 Query: 272 acatcgtggcgaagctttgcaat 294 ||||||||||||||||||||||| Sbjct: 7519 acatcgtggcgaagctttgcaat 7497 Score = 48.1 bits (24), Expect = 0.034 Identities = 57/68 (83%) Strand = Plus / Minus Query: 464 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgttt 523 ||||||| |||||| || || |||||||| || ||||| || ||||| ||||| || ||| Sbjct: 7111 cccatccggatgccaccaggaaccatagcagacacatctcccggaacggtgtttttattt 7052 Query: 524 gctgcaat 531 |||||||| Sbjct: 7051 gctgcaat 7044
>dbj|AP004578.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17H01, TM0541, complete sequence Length = 110985 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 212 ttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctcc 271 ||||||||||| || | ||||| || || || ||||| || ||||| ||||| ||||| Sbjct: 95182 ttgtacttcattgttgccttctcaaaaccaatggttggaaactgtttcgcatactcctca 95123 Query: 272 acatcgtggcgaagctttgcaat 294 ||||||||||||||||||||||| Sbjct: 95122 acatcgtggcgaagctttgcaat 95100 Score = 48.1 bits (24), Expect = 0.034 Identities = 57/68 (83%) Strand = Plus / Minus Query: 464 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgttt 523 ||||||| |||||| || || |||||||| || ||||| || ||||| ||||| || ||| Sbjct: 94714 cccatccggatgccaccaggaaccatagcagacacatctcccggaacggtgtttttattt 94655 Query: 524 gctgcaat 531 |||||||| Sbjct: 94654 gctgcaat 94647
>gb|AC126010.13| Medicago truncatula clone mth2-20e4, complete sequence Length = 113964 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 464 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgttt 523 ||||||||||| || || || |||||||| || ||||| || ||||||||||| || || Sbjct: 58327 cccatcctgataccaccaggaaccatagcagacacatctcctggaacagtgtttttatta 58268 Query: 524 gctgcaatatg 534 ||||||||||| Sbjct: 58267 gctgcaatatg 58257 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Minus Query: 420 cgaagtcctcctcaacaaatcctcttgatgtaag 453 |||| ||||||||||||||||| ||||| ||||| Sbjct: 58456 cgaaatcctcctcaacaaatccccttgaagtaag 58423
>gb|AF416481.1|AF416481 Cicer arietinum hydroxymethyl transferase mRNA, partial cds Length = 284 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Minus Query: 212 ttgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctc 270 |||||||||||||| |||| || || || || ||||| |||||||||||| ||||||| Sbjct: 68 ttgtacttcatggttgctttttcaaaaccaatggttggaaattgttttgcaaattcctc 10
>emb|CR962125.2| Medicago truncatula chromosome 5 clone mth2-179a9, COMPLETE SEQUENCE Length = 113972 Score = 46.1 bits (23), Expect = 0.14 Identities = 86/107 (80%) Strand = Plus / Minus Query: 464 cccatcctgatgcctccgggtaccatagctgaaacatcaccaggaacagtgttcttgttt 523 ||||| ||||| ||||| || ||||| || || ||||| || ||||||||||| || || Sbjct: 22562 cccattctgatccctccaggaaccattgcagacacatctcctggaacagtgtttttattg 22503 Query: 524 gctgcaatatgcacattttctaaaaccttctccactcttgaaccatc 570 || || ||||| || |||||| |||||||| || ||||||||||| Sbjct: 22502 gcagctatatgaactgattctaacaccttctcaacccttgaaccatc 22456
>ref|XM_706590.1| Candida albicans SC5314 hypothetical protein (SHM1) partial mRNA Length = 1482 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 490 agctgaaacatcaccaggaacagtgttctt 519 |||||| |||||||||||||| |||||||| Sbjct: 1221 agctgatacatcaccaggaacggtgttctt 1192
>gb|AC129335.4| Mus musculus BAC clone RP23-109H7 from chromosome 1, complete sequence Length = 201274 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 ctttaaccttcaaagccaagtt 387 |||||||||||||||||||||| Sbjct: 32135 ctttaaccttcaaagccaagtt 32114
>ref|XM_883849.1| Candida albicans SC5314 hypothetical protein (CaJ7.0385) partial mRNA Length = 1482 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 490 agctgaaacatcaccaggaacagtgttctt 519 |||||| |||||||||||||| |||||||| Sbjct: 1221 agctgatacatcaccaggaacggtgttctt 1192
>gb|AC164169.8| Mus musculus 6 BAC RP23-413M4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209149 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 161 ttgtgcttcctgtttgcttcct 182 |||||||||||||||||||||| Sbjct: 194735 ttgtgcttcctgtttgcttcct 194756
>gb|AC153848.5| Mus musculus 6 BAC RP23-111L15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187830 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 161 ttgtgcttcctgtttgcttcct 182 |||||||||||||||||||||| Sbjct: 54206 ttgtgcttcctgtttgcttcct 54227
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence Length = 949626 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 490 agctgaaacatcaccaggaacagtgttctt 519 |||||| |||||||||||||| |||||||| Sbjct: 736359 agctgatacatcaccaggaacggtgttctt 736388
>gb|AC113269.13| Mus musculus chromosome 15, clone RP23-372F2, complete sequence Length = 202155 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 tgcttcctgtttgcttccttgctgt 188 |||||||||||||||||| |||||| Sbjct: 70853 tgcttcctgtttgcttccgtgctgt 70877
>emb|AL121870.9|HSB166C10 Human DNA sequence from clone RP13-166C10 on chromosome Xq21.1-21.3, complete sequence Length = 122049 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 tttcagcttggatgttgctgt 314 ||||||||||||||||||||| Sbjct: 104450 tttcagcttggatgttgctgt 104470
>emb|AL031985.10|HS228H13 Human DNA sequence from clone RP1-228H13 on chromosome 1p34.1-35.3 Contains the gene for a novel protein, a ribosomal protein L21 (RPL21), a ribosomal protein L10a (RPL10A) and the gene for a novel zinc finger protein, complete sequence Length = 139737 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 tgtgcttcctgtttgcttcct 182 ||||||||||||||||||||| Sbjct: 105621 tgtgcttcctgtttgcttcct 105601
>gb|AC087878.7| Homo sapiens chromosome 15, clone RP11-62C7, complete sequence Length = 166485 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 accaaaactaaatggttatca 613 ||||||||||||||||||||| Sbjct: 122980 accaaaactaaatggttatca 122960
>gb|AC012077.4|AC012077 Homo sapiens BAC clone RP11-524G14 from Y, complete sequence Length = 209287 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 tttcagcttggatgttgctgt 314 ||||||||||||||||||||| Sbjct: 169390 tttcagcttggatgttgctgt 169410
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 567 catctattccctttttcttgaggtt 591 |||||||||||||||||| |||||| Sbjct: 1385562 catctattccctttttctggaggtt 1385538
>gb|AC110036.8| Mus musculus chromosome 7, clone RP23-254F9, complete sequence Length = 185681 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 gggttcccatcctgatgcct 478 |||||||||||||||||||| Sbjct: 170075 gggttcccatcctgatgcct 170094
>gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, complete sequence Length = 256158 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 ctgtttgcttccttgctgtt 189 |||||||||||||||||||| Sbjct: 85155 ctgtttgcttccttgctgtt 85174
>ref|XM_458248.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C14113g) partial mRNA Length = 1482 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 500 tcaccaggaacagtgttcttgtttgctgcaat 531 ||||| ||||||||||||||||| || ||||| Sbjct: 1208 tcacctggaacagtgttcttgttggcagcaat 1177
>gb|AY669085.1| Toxoplasma gondii strain RH serine hydroxymethyltransferase (shmt) mRNA, complete cds Length = 1547 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 499 atcaccaggaacagtgttcttgtt 522 ||||||||| |||||||||||||| Sbjct: 1219 atcaccagggacagtgttcttgtt 1196
>gb|AC165079.2| Mus musculus BAC clone RP24-92K17 from chromosome 16, complete sequence Length = 156977 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 aaaaccttctccactcttga 564 |||||||||||||||||||| Sbjct: 96604 aaaaccttctccactcttga 96623
>ref|XM_745127.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g04710) partial mRNA Length = 1263 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 gcttccttgctgttgaaacacagc 199 |||||||||| ||||||||||||| Sbjct: 35 gcttccttgcagttgaaacacagc 12
>emb|Z78199.1|CEK12F2 Caenorhabditis elegans Cosmid K12F2, complete sequence Length = 12999 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 ggcgaagctttgcaatttcagctt 302 |||||||||| ||||||||||||| Sbjct: 7977 ggcgaagcttggcaatttcagctt 8000
>gb|AC116734.14| Mus musculus chromosome 7, clone RP23-359D11, complete sequence Length = 217741 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 gggttcccatcctgatgcct 478 |||||||||||||||||||| Sbjct: 34173 gggttcccatcctgatgcct 34192
>gb|AC104871.8| Mus musculus chromosome 13, clone RP23-281C23, complete sequence Length = 165863 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 gaagctttgcaatttcagct 301 |||||||||||||||||||| Sbjct: 21826 gaagctttgcaatttcagct 21807
>emb|AL157701.2| Human DNA sequence from clone RP4-628F15 on chromosome X Contains part of a novel gene, complete sequence Length = 93008 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 579 ttttcttgaggttcaccaaa 598 |||||||||||||||||||| Sbjct: 55949 ttttcttgaggttcaccaaa 55968
>emb|X08067.1|CEMYO3 Caenorhabditis elegans myo-3 gene for myosin heavy chain 3 (MHC-A) Length = 11621 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 ggcgaagctttgcaatttcagctt 302 |||||||||| ||||||||||||| Sbjct: 7886 ggcgaagcttggcaatttcagctt 7863
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 500 tcaccaggaacagtgttcttgtttgctgcaat 531 ||||| ||||||||||||||||| || ||||| Sbjct: 1160303 tcacctggaacagtgttcttgttggcagcaat 1160272
>gb|AC087847.6| Homo sapiens chromosome 8, clone RP11-353D5, complete sequence Length = 170722 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ttcttgtacttcatggtctc 228 |||||||||||||||||||| Sbjct: 117303 ttcttgtacttcatggtctc 117322
>ref|NM_073664.3| Caenorhabditis elegans MYOsin heavy chain structural genes family member (myo-3) (myo-3) mRNA, complete cds Length = 6059 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 ggcgaagctttgcaatttcagctt 302 |||||||||| ||||||||||||| Sbjct: 3565 ggcgaagcttggcaatttcagctt 3542
>gb|AC155267.1| Mus musculus BAC clone RP23-248M19 from chromosome 13, complete sequence Length = 178290 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 gaagctttgcaatttcagct 301 |||||||||||||||||||| Sbjct: 83245 gaagctttgcaatttcagct 83226
>gb|AC087798.10| Homo sapiens 12 BAC RP11-788H18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160095 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 aatatgcacattttctaaaa 548 |||||||||||||||||||| Sbjct: 37622 aatatgcacattttctaaaa 37641
>emb|BX005217.5| Zebrafish DNA sequence from clone CH211-87L3 in linkage group 15, complete sequence Length = 154452 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 592 caccaaaactaaatggttatcagt 615 |||||||| ||||||||||||||| Sbjct: 99468 caccaaaagtaaatggttatcagt 99445
>gb|BC084962.1| Xenopus laevis hypothetical LOC495440, mRNA (cDNA clone MGC:84058 IMAGE:6948237), complete cds Length = 6578 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 acctgctgctgcagctttaa 371 |||||||||||||||||||| Sbjct: 240 acctgctgctgcagctttaa 221
>dbj|AB002815.1| Perilla frutescens mRNA for chalcone synthase, complete cds Length = 1449 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 cagtttggtacctgctgctg 362 |||||||||||||||||||| Sbjct: 1203 cagtttggtacctgctgctg 1222
>emb|AL772176.6| Mouse DNA sequence from clone RP23-37B18 on chromosome 4, complete sequence Length = 127986 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 541 ttctaaaaccttctccactcttga 564 |||||||||||| ||||||||||| Sbjct: 21941 ttctaaaaccttttccactcttga 21964 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,132,408 Number of Sequences: 3902068 Number of extensions: 6132408 Number of successful extensions: 148048 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 147733 Number of HSP's gapped (non-prelim): 291 length of query: 615 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 592 effective length of database: 17,143,297,704 effective search space: 10148832240768 effective search space used: 10148832240768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)