ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal14g09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY108754.1| Zea mays PCO136495 mRNA sequence 135 2e-28
2gb|BT013309.1| Lycopersicon esculentum clone 134978F, mRNA sequence 80 9e-12
3gb|BT012721.1| Lycopersicon esculentum clone 113647F, mRNA sequence 80 9e-12
4dbj|AB014076.1| Brassica napus mRNA for serine decarboxylase, co... 76 1e-10
5ref|NM_103496.2| Arabidopsis thaliana EMB1075; carboxy-lyase AT1... 72 2e-09
6gb|AY040033.1| Arabidopsis thaliana putative histidine decarboxy... 72 2e-09
7gb|AF360233.1| Arabidopsis thaliana putative histidine decarboxy... 72 2e-09
8gb|AF389349.1|AF389349 Arabidopsis thaliana serine decarboxylase... 72 2e-09
9emb|BX814962.1|CNS0ADZU Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
10emb|BX813828.1|CNS0ADR1 Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
11gb|AC009526.4|AC009526 Arabidopsis thaliana chromosome I BAC F2J... 72 2e-09
12dbj|AB030379.1| Arabidopsis thaliana AtHDC mRNA for histidine de... 72 2e-09
13dbj|AB036933.1| Arabidopsis thaliana AtHDC gene for histidine de... 72 2e-09
14dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
15dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
16dbj|AP004847.2| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
17ref|NM_194520.1| Oryza sativa (japonica cultivar-group) putative... 46 0.12
18gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.12
19gb|AC037197.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.12
20gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.12
21dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
22gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.12
23gb|AC150308.1| Latimeria menadoensis clone VMRC4-24C12, complete... 44 0.48
24gb|AC116503.17| Mus musculus chromosome 9, clone RP24-302M3, com... 42 1.9
25emb|CR450741.5| Zebrafish DNA sequence from clone CH211-269F16 i... 42 1.9
26emb|AL109742.12|HSJ542O18 Human DNA sequence from clone RP4-542O... 42 1.9
27emb|AL049198.2|HS590K14 Human DNA sequence from clone RP4-590K14... 42 1.9
28dbj|AB221013.2| Beta vulgaris BvSDC1 mRNA for putative serine de... 42 1.9
29emb|BX537129.6| Zebrafish DNA sequence from clone CH211-236I20 i... 42 1.9
30gb|AC135398.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
31emb|CR762389.21| Zebrafish DNA sequence from clone DKEY-240O2 in... 40 7.5
32emb|AL357936.25| Human DNA sequence from clone RP11-524G24 on ch... 40 7.5
33emb|AL118510.6|HSJ858M22 Human DNA sequence from clone RP5-858M2... 40 7.5
34emb|AL662802.14| Mouse DNA sequence from clone RP23-34N10 on chr... 40 7.5
35emb|BX005109.23| Zebrafish DNA sequence from clone CH211-284K5 i... 40 7.5
36emb|AL049925.1|HSM800267 Homo sapiens mRNA; cDNA DKFZp564G0982 (... 40 7.5
37gb|AC104209.7| Homo sapiens chromosome 18, clone RP11-653G8, com... 40 7.5
38gb|AC012378.10| Homo sapiens chromosome 15 clone RP11-420M1 map ... 40 7.5
39gb|AC022083.6|AC022083 Homo sapiens chromosome 15 clone CTD-2137... 40 7.5
40dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
41gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
42emb|AL837510.5| Mouse DNA sequence from clone RP23-200B23 on chr... 40 7.5
43emb|AL590997.13| Mouse DNA sequence from clone RP23-132J20 on ch... 40 7.5

>gb|AY108754.1| Zea mays PCO136495 mRNA sequence
          Length = 945

 Score =  135 bits (68), Expect = 2e-28
 Identities = 175/211 (82%)
 Strand = Plus / Minus

                                                                       
Query: 345 tgacactgggcattaccacaacatgtgatatacttccctcacaagcaagctgccaccgtc 404
           ||||||||||||| |||||||| || | |||| | || |||||||| |||||||||| ||
Sbjct: 566 tgacactgggcatcaccacaacgtgagctatattcccttcacaagccagctgccaccttc 507

                                                                       
Query: 405 gcacaaactcctcgtcctttggcctctcaaaaactactgtactgctgagctcgttangca 464
           | ||||| || || ||||||||||| ||||| || || || || |||||||||||| |||
Sbjct: 506 ggacaaattcttcatcctttggcctttcaaacacgaccgtgctactgagctcgttaagca 447

                                                                       
Query: 465 tcgcactaattccagcatccttgagccgatctttaaggtaatgtgcatttctcaagcatt 524
           |||| |  ||||| || |||||||| |||||||| ||||| ||||| ||||||||||| |
Sbjct: 446 tcgctccgattcctgcttccttgaggcgatcttttaggtagtgtgcgtttctcaagcact 387

                                          
Query: 525 tctgaacttccttctgaaaacctctatagcc 555
           | || ||||| ||||| || ||||| |||||
Sbjct: 386 tttggacttctttctggaagcctctgtagcc 356



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>gb|BT013309.1| Lycopersicon esculentum clone 134978F, mRNA sequence
          Length = 1706

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 173/215 (80%), Gaps = 2/215 (0%)
 Strand = Plus / Minus

                                                                        
Query: 327  tatccagcttatcgacagtgacactgggcattaccacaacatgtgatatacttccctcac 386
            ||||||||||||| || || ||||| ||||| || ||||||||||  ||| |||  ||||
Sbjct: 1404 tatccagcttatcaactgtcacactaggcatcacaacaacatgtgccatatttctttcac 1345

                                                                        
Query: 387  aagcaagctgccaccgtcgcacaaactcctcgtcctttggcctctcaaaaactactgtac 446
            ||||||| ||||||   || ||||||||||| || || || | ||||||||| ||||| |
Sbjct: 1344 aagcaagttgccacttgcgaacaaactcctcatctttaggtcgctcaaaaacaactgtgc 1285

                                                                        
Query: 447  tgctgagctcgttangcatcgcactaattccagcatcct-tgagccgatctttaaggtaa 505
            |||| ||||| ||  |||| ||||| |||||||| |||| | || || ||||| |  |||
Sbjct: 1284 tgctcagctcattcagcatagcactgattccagc-tcctataaggcggtctttcaaataa 1226

                                               
Query: 506  tgtgcatttctcaagcatttctgaacttccttctg 540
            || ||||| |||| ||| ||||| |||||||||||
Sbjct: 1225 tgagcattcctcaggcacttctggacttccttctg 1191



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>gb|BT012721.1| Lycopersicon esculentum clone 113647F, mRNA sequence
          Length = 1842

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 173/215 (80%), Gaps = 2/215 (0%)
 Strand = Plus / Minus

                                                                        
Query: 327  tatccagcttatcgacagtgacactgggcattaccacaacatgtgatatacttccctcac 386
            ||||||||||||| || || ||||| ||||| || ||||||||||  ||| |||  ||||
Sbjct: 1441 tatccagcttatcaactgtcacactaggcatcacaacaacatgtgccatatttctttcac 1382

                                                                        
Query: 387  aagcaagctgccaccgtcgcacaaactcctcgtcctttggcctctcaaaaactactgtac 446
            ||||||| ||||||   || ||||||||||| || || || | ||||||||| ||||| |
Sbjct: 1381 aagcaagttgccacttgcgaacaaactcctcatctttaggtcgctcaaaaacaactgtgc 1322

                                                                        
Query: 447  tgctgagctcgttangcatcgcactaattccagcatcct-tgagccgatctttaaggtaa 505
            |||| ||||| ||  |||| ||||| |||||||| |||| | || || ||||| |  |||
Sbjct: 1321 tgctcagctcattcagcatagcactgattccagc-tcctataaggcggtctttcaaataa 1263

                                               
Query: 506  tgtgcatttctcaagcatttctgaacttccttctg 540
            || ||||| |||| ||| ||||| |||||||||||
Sbjct: 1262 tgagcattcctcaggcacttctggacttccttctg 1228



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>dbj|AB014076.1| Brassica napus mRNA for serine decarboxylase, complete cds
          Length = 1897

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 169/213 (79%)
 Strand = Plus / Minus

                                                                        
Query: 328  atccagcttatcgacagtgacactgggcattaccacaacatgtgatatacttccctcaca 387
            ||||||||| || || || ||||| ||||| ||||| ||||| | ||||   || | |||
Sbjct: 1490 atccagcttctctactgtaacacttggcataaccaccacatgagctatatcgccttgaca 1431

                                                                        
Query: 388  agcaagctgccaccgtcgcacaaactcctcgtcctttggcctctcaaaaactactgtact 447
            |||||||||||||| ||  |||||||| || ||||| || |  ||||| || || || ||
Sbjct: 1430 agcaagctgccaccttctgacaaactcttcctccttgggacgttcaaagaccacagtgct 1371

                                                                        
Query: 448  gctgagctcgttangcatcgcactaattccagcatccttgagccgatctttaaggtaatg 507
            ||| ||||| ||  ||||||| || || ||||| ||   ||| || ||||| ||||||||
Sbjct: 1370 gctaagctcattgagcatcgcgctgatcccagcttcacggagtcggtctttgaggtaatg 1311

                                             
Query: 508  tgcatttctcaagcatttctgaacttccttctg 540
             |||||||||| |||||||||||| ||||||||
Sbjct: 1310 cgcatttctcaggcatttctgaacctccttctg 1278



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>ref|NM_103496.2| Arabidopsis thaliana EMB1075; carboxy-lyase AT1G43710 (EMB1075) mRNA,
            complete cds
          Length = 1749

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 125/155 (80%)
 Strand = Plus / Minus

                                                                        
Query: 386  caagcaagctgccaccgtcgcacaaactcctcgtcctttggcctctcaaaaactactgta 445
            |||||||||||||||| ||  |||||||| || || || ||||  ||||| || || || 
Sbjct: 1360 caagcaagctgccaccttctaacaaactcttcatctttaggccgttcaaagaccacagtg 1301

                                                                        
Query: 446  ctgctgagctcgttangcatcgcactaattccagcatccttgagccgatctttaaggtaa 505
            ||||| ||||| ||| |||| || ||||| ||||| ||    || || ||||| ||||||
Sbjct: 1300 ctgctaagctcattaagcatggcgctaatcccagcttcacgaagtcggtctttgaggtaa 1241

                                               
Query: 506  tgtgcatttctcaagcatttctgaacttccttctg 540
            || || ||||||||||||||||||||||| |||||
Sbjct: 1240 tgcgcgtttctcaagcatttctgaacttctttctg 1206



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>gb|AY040033.1| Arabidopsis thaliana putative histidine decarboxylase (At1g43710)
            mRNA, complete cds
          Length = 1449

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 125/155 (80%)
 Strand = Plus / Minus

                                                                        
Query: 386  caagcaagctgccaccgtcgcacaaactcctcgtcctttggcctctcaaaaactactgta 445
            |||||||||||||||| ||  |||||||| || || || ||||  ||||| || || || 
Sbjct: 1274 caagcaagctgccaccttctaacaaactcttcatctttaggccgttcaaagaccacagtg 1215

                                                                        
Query: 446  ctgctgagctcgttangcatcgcactaattccagcatccttgagccgatctttaaggtaa 505
            ||||| ||||| ||| |||| || ||||| ||||| ||    || || ||||| ||||||
Sbjct: 1214 ctgctaagctcattaagcatggcgctaatcccagcttcacgaagtcggtctttgaggtaa 1155

                                               
Query: 506  tgtgcatttctcaagcatttctgaacttccttctg 540
            || || ||||||||||||||||||||||| |||||
Sbjct: 1154 tgcgcgtttctcaagcatttctgaacttctttctg 1120



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>gb|AF360233.1| Arabidopsis thaliana putative histidine decarboxylase (At1g43710)
            mRNA, complete cds
          Length = 1675

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 125/155 (80%)
 Strand = Plus / Minus

                                                                        
Query: 386  caagcaagctgccaccgtcgcacaaactcctcgtcctttggcctctcaaaaactactgta 445
            |||||||||||||||| ||  |||||||| || || || ||||  ||||| || || || 
Sbjct: 1360 caagcaagctgccaccttctaacaaactcttcatctttaggccgttcaaagaccacagtg 1301

                                                                        
Query: 446  ctgctgagctcgttangcatcgcactaattccagcatccttgagccgatctttaaggtaa 505
            ||||| ||||| ||| |||| || ||||| ||||| ||    || || ||||| ||||||
Sbjct: 1300 ctgctaagctcattaagcatggcgctaatcccagcttcacgaagtcggtctttgaggtaa 1241

                                               
Query: 506  tgtgcatttctcaagcatttctgaacttccttctg 540
            || || ||||||||||||||||||||||| |||||
Sbjct: 1240 tgcgcgtttctcaagcatttctgaacttctttctg 1206



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>gb|AF389349.1|AF389349 Arabidopsis thaliana serine decarboxylase mRNA, complete cds
          Length = 1584

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 125/155 (80%)
 Strand = Plus / Minus

                                                                        
Query: 386  caagcaagctgccaccgtcgcacaaactcctcgtcctttggcctctcaaaaactactgta 445
            |||||||||||||||| ||  |||||||| || || || ||||  ||||| || || || 
Sbjct: 1300 caagcaagctgccaccttctaacaaactcttcatctttaggccgttcaaagaccacagtg 1241

                                                                        
Query: 446  ctgctgagctcgttangcatcgcactaattccagcatccttgagccgatctttaaggtaa 505
            ||||| ||||| ||| |||| || ||||| ||||| ||    || || ||||| ||||||
Sbjct: 1240 ctgctaagctcattaagcatggcgctaatcccagcttcacgaagtcggtctttgaggtaa 1181

                                               
Query: 506  tgtgcatttctcaagcatttctgaacttccttctg 540
            || || ||||||||||||||||||||||| |||||
Sbjct: 1180 tgcgcgtttctcaagcatttctgaacttctttctg 1146



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>emb|BX814962.1|CNS0ADZU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS20ZD12 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1616

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 125/155 (80%)
 Strand = Plus / Minus

                                                                        
Query: 386  caagcaagctgccaccgtcgcacaaactcctcgtcctttggcctctcaaaaactactgta 445
            |||||||||||||||| ||  |||||||| || || || ||||  ||||| || || || 
Sbjct: 1330 caagcaagctgccaccttctaacaaactcttcatctttaggccgttcaaagaccacagtg 1271

                                                                        
Query: 446  ctgctgagctcgttangcatcgcactaattccagcatccttgagccgatctttaaggtaa 505
            ||||| ||||| ||| |||| || ||||| ||||| ||    || || ||||| ||||||
Sbjct: 1270 ctgctaagctcattaagcatggcgctaatcccagcttcacgaagtcggtctttgaggtaa 1211

                                               
Query: 506  tgtgcatttctcaagcatttctgaacttccttctg 540
            || || ||||||||||||||||||||||| |||||
Sbjct: 1210 tgcgcgtttctcaagcatttctgaacttctttctg 1176



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>emb|BX813828.1|CNS0ADR1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB41ZD06 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1573

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 125/155 (80%)
 Strand = Plus / Minus

                                                                        
Query: 386  caagcaagctgccaccgtcgcacaaactcctcgtcctttggcctctcaaaaactactgta 445
            |||||||||||||||| ||  |||||||| || || || ||||  ||||| || || || 
Sbjct: 1232 caagcaagctgccaccttctaacaaactcttcatctttaggccgttcaaagaccacagtg 1173

                                                                        
Query: 446  ctgctgagctcgttangcatcgcactaattccagcatccttgagccgatctttaaggtaa 505
            ||||| ||||| ||| |||| || ||||| ||||| ||    || || ||||| ||||||
Sbjct: 1172 ctgctaagctcattaagcatggcgctaatcccagcttcacgaagtcggtctttgaggtaa 1113

                                               
Query: 506  tgtgcatttctcaagcatttctgaacttccttctg 540
            || || ||||||||||||||||||||||| |||||
Sbjct: 1112 tgcgcgtttctcaagcatttctgaacttctttctg 1078



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>gb|AC009526.4|AC009526 Arabidopsis thaliana chromosome I BAC F2J6 genomic sequence, complete
             sequence
          Length = 108061

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 125/155 (80%)
 Strand = Plus / Plus

                                                                         
Query: 386   caagcaagctgccaccgtcgcacaaactcctcgtcctttggcctctcaaaaactactgta 445
             |||||||||||||||| ||  |||||||| || || || ||||  ||||| || || || 
Sbjct: 45121 caagcaagctgccaccttctaacaaactcttcatctttaggccgttcaaagaccacagtg 45180

                                                                         
Query: 446   ctgctgagctcgttangcatcgcactaattccagcatccttgagccgatctttaaggtaa 505
             ||||| ||||| ||| |||| || ||||| ||||| ||    || || ||||| ||||||
Sbjct: 45181 ctgctaagctcattaagcatggcgctaatcccagcttcacgaagtcggtctttgaggtaa 45240

                                                
Query: 506   tgtgcatttctcaagcatttctgaacttccttctg 540
             || || ||||||||||||||||||||||| |||||
Sbjct: 45241 tgcgcgtttctcaagcatttctgaacttctttctg 45275



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>dbj|AB030379.1| Arabidopsis thaliana AtHDC mRNA for histidine decarboxylase, complete
            cds
          Length = 1605

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 125/155 (80%)
 Strand = Plus / Minus

                                                                        
Query: 386  caagcaagctgccaccgtcgcacaaactcctcgtcctttggcctctcaaaaactactgta 445
            |||||||||||||||| ||  |||||||| || || || ||||  ||||| || || || 
Sbjct: 1289 caagcaagctgccaccttctaacaaactcttcatctttaggccgttcaaagaccacagtg 1230

                                                                        
Query: 446  ctgctgagctcgttangcatcgcactaattccagcatccttgagccgatctttaaggtaa 505
            ||||| ||||| ||| |||| || ||||| ||||| ||    || || ||||| ||||||
Sbjct: 1229 ctgctaagctcattaagcatggcgctaatcccagcttcacgaagtcggtctttgaggtaa 1170

                                               
Query: 506  tgtgcatttctcaagcatttctgaacttccttctg 540
            || || ||||||||||||||||||||||| |||||
Sbjct: 1169 tgcgcgtttctcaagcatttctgaacttctttctg 1135



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>dbj|AB036933.1| Arabidopsis thaliana AtHDC gene for histidine decarboxylase, complete
            cds
          Length = 3564

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 125/155 (80%)
 Strand = Plus / Minus

                                                                        
Query: 386  caagcaagctgccaccgtcgcacaaactcctcgtcctttggcctctcaaaaactactgta 445
            |||||||||||||||| ||  |||||||| || || || ||||  ||||| || || || 
Sbjct: 3136 caagcaagctgccaccttctaacaaactcttcatctttaggccgttcaaagaccacagtg 3077

                                                                        
Query: 446  ctgctgagctcgttangcatcgcactaattccagcatccttgagccgatctttaaggtaa 505
            ||||| ||||| ||| |||| || ||||| ||||| ||    || || ||||| ||||||
Sbjct: 3076 ctgctaagctcattaagcatggcgctaatcccagcttcacgaagtcggtctttgaggtaa 3017

                                               
Query: 506  tgtgcatttctcaagcatttctgaacttccttctg 540
            || || ||||||||||||||||||||||| |||||
Sbjct: 3016 tgcgcgtttctcaagcatttctgaacttctttctg 2982



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 166/212 (78%)
 Strand = Plus / Minus

                                                                            
Query: 329      tccagcttatcgacagtgacactgggcattaccacaacatgtgatatacttccctcacaa 388
                |||||||| ||||  || ||||||||||| ||||| ||||| |  ||  | ||||| || 
Sbjct: 20131495 tccagcttgtcgatggtcacactgggcatcaccacgacatgagcgatgttgccctcgcag 20131436

                                                                            
Query: 389      gcaagctgccaccgtcgcacaaactcctcgtcctttggcctctcaaaaactactgtactg 448
                || ||||||||||  || || |||||||||||||| ||||| || || || || || |||
Sbjct: 20131435 gcgagctgccacctccggacgaactcctcgtccttgggcctttcgaacaccacggtgctg 20131376

                                                                            
Query: 449      ctgagctcgttangcatcgcactaattccagcatccttgagccgatctttaaggtaatgt 508
                || ||||||||  |||| || |  |||||||| |||||||| || || || ||||| || 
Sbjct: 20131375 ctcagctcgttgagcatggcgccgattccagcttccttgaggcggtccttcaggtagtga 20131316

                                                
Query: 509      gcatttctcaagcatttctgaacttccttctg 540
                || || |||| ||| ||||| || ||||||||
Sbjct: 20131315 gcgttcctcaggcacttctggacctccttctg 20131284



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>dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0472F10
          Length = 136076

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 166/212 (78%)
 Strand = Plus / Minus

                                                                        
Query: 329  tccagcttatcgacagtgacactgggcattaccacaacatgtgatatacttccctcacaa 388
            |||||||| ||||  || ||||||||||| ||||| ||||| |  ||  | ||||| || 
Sbjct: 4801 tccagcttgtcgatggtcacactgggcatcaccacgacatgagcgatgttgccctcgcag 4742

                                                                        
Query: 389  gcaagctgccaccgtcgcacaaactcctcgtcctttggcctctcaaaaactactgtactg 448
            || ||||||||||  || || |||||||||||||| ||||| || || || || || |||
Sbjct: 4741 gcgagctgccacctccggacgaactcctcgtccttgggcctttcgaacaccacggtgctg 4682

                                                                        
Query: 449  ctgagctcgttangcatcgcactaattccagcatccttgagccgatctttaaggtaatgt 508
            || ||||||||  |||| || |  |||||||| |||||||| || || || ||||| || 
Sbjct: 4681 ctcagctcgttgagcatggcgccgattccagcttccttgaggcggtccttcaggtagtga 4622

                                            
Query: 509  gcatttctcaagcatttctgaacttccttctg 540
            || || |||| ||| ||||| || ||||||||
Sbjct: 4621 gcgttcctcaggcacttctggacctccttctg 4590



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>dbj|AP004847.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1298_H07
          Length = 106434

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 166/212 (78%)
 Strand = Plus / Minus

                                                                         
Query: 329   tccagcttatcgacagtgacactgggcattaccacaacatgtgatatacttccctcacaa 388
             |||||||| ||||  || ||||||||||| ||||| ||||| |  ||  | ||||| || 
Sbjct: 80018 tccagcttgtcgatggtcacactgggcatcaccacgacatgagcgatgttgccctcgcag 79959

                                                                         
Query: 389   gcaagctgccaccgtcgcacaaactcctcgtcctttggcctctcaaaaactactgtactg 448
             || ||||||||||  || || |||||||||||||| ||||| || || || || || |||
Sbjct: 79958 gcgagctgccacctccggacgaactcctcgtccttgggcctttcgaacaccacggtgctg 79899

                                                                         
Query: 449   ctgagctcgttangcatcgcactaattccagcatccttgagccgatctttaaggtaatgt 508
             || ||||||||  |||| || |  |||||||| |||||||| || || || ||||| || 
Sbjct: 79898 ctcagctcgttgagcatggcgccgattccagcttccttgaggcggtccttcaggtagtga 79839

                                             
Query: 509   gcatttctcaagcatttctgaacttccttctg 540
             || || |||| ||| ||||| || ||||||||
Sbjct: 79838 gcgttcctcaggcacttctggacctccttctg 79807



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>ref|NM_194520.1| Oryza sativa (japonica cultivar-group) putative histidine
            decarboxylase (OSJNBa0071K19.20), mRNA
          Length = 1404

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 343  agtgacactgggcattaccacaacatgtgatatacttccctcacaagcaagctgccacc 401
            ||||||| | ||||| || |||| ||||| || | |||||||||||||||| |||||||
Sbjct: 1245 agtgacatttggcatcacaacaatatgtgctaaatttccctcacaagcaagttgccacc 1187



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>gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0071K19,
              complete sequence
          Length = 174752

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                         
Query: 343    agtgacactgggcattaccacaacatgtgatatacttccctcacaagcaagctgccacc 401
              ||||||| | ||||| || |||| ||||| || | |||||||||||||||| |||||||
Sbjct: 174336 agtgacatttggcatcacaacaatatgtgctaaatttccctcacaagcaagttgccacc 174278



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>gb|AC037197.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0065H03, complete sequence
          Length = 141017

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 343   agtgacactgggcattaccacaacatgtgatatacttccctcacaagcaagctgccacc 401
             ||||||| | ||||| || |||| ||||| || | |||||||||||||||| |||||||
Sbjct: 13452 agtgacatttggcatcacaacaatatgtgctaaatttccctcacaagcaagttgccacc 13394



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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
              Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                         
Query: 343    agtgacactgggcattaccacaacatgtgatatacttccctcacaagcaagctgccacc 401
              ||||||| | ||||| || |||| ||||| || | |||||||||||||||| |||||||
Sbjct: 409278 agtgacatttggcatcacaacaatatgtgctaaatttccctcacaagcaagttgccacc 409220



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10,
              complete sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                         
Query: 343    agtgacactgggcattaccacaacatgtgatatacttccctcacaagcaagctgccacc 401
              ||||||| | ||||| || |||| ||||| || | |||||||||||||||| |||||||
Sbjct: 409278 agtgacatttggcatcacaacaatatgtgctaaatttccctcacaagcaagttgccacc 409220



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                         
Query: 343    agtgacactgggcattaccacaacatgtgatatacttccctcacaagcaagctgccacc 401
              ||||||| | ||||| || |||| ||||| || | |||||||||||||||| |||||||
Sbjct: 409275 agtgacatttggcatcacaacaatatgtgctaaatttccctcacaagcaagttgccacc 409217



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>gb|AC150308.1| Latimeria menadoensis clone VMRC4-24C12, complete sequence
          Length = 150025

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 90     catgacaacaatgaacaataaa 111
              ||||||||||||||||||||||
Sbjct: 118252 catgacaacaatgaacaataaa 118231



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>gb|AC116503.17| Mus musculus chromosome 9, clone RP24-302M3, complete sequence
          Length = 199065

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 340    gacagtgacactgggcattaccaca 364
              |||||||| ||||||||||||||||
Sbjct: 138245 gacagtgatactgggcattaccaca 138269



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>emb|CR450741.5| Zebrafish DNA sequence from clone CH211-269F16 in linkage group 24,
              complete sequence
          Length = 157603

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 314    tcatttaagaaagtatccagc 334
              |||||||||||||||||||||
Sbjct: 112853 tcatttaagaaagtatccagc 112873



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>emb|AL109742.12|HSJ542O18 Human DNA sequence from clone RP4-542O18 on chromosome 1p32.3-34.1
             Contains GSSs, complete sequence
          Length = 101453

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 231   aattctcctggccaacatcagctgc 255
             ||||||||||||||||| |||||||
Sbjct: 68811 aattctcctggccaacagcagctgc 68835



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>emb|AL049198.2|HS590K14 Human DNA sequence from clone RP4-590K14 on chromosome 1q25.3-31.2
             Contains EST and GSSs, complete sequence
          Length = 41015

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 239   tggccaacatcagctgcaatg 259
             |||||||||||||||||||||
Sbjct: 31905 tggccaacatcagctgcaatg 31925



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>dbj|AB221013.2| Beta vulgaris BvSDC1 mRNA for putative serine decarboxylase, complete
            cds
          Length = 1970

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                        
Query: 446  ctgctgagctcgttangcatcgcactaattccagcatccttgagccgatctttaaggtaa 505
            ||||| ||||| ||| |||| |||||||||||| | ||  | ||||| ||||||||||| 
Sbjct: 1374 ctgcttagctcattaagcatggcactaattccaacctctctaagccggtctttaaggtag 1315

                    
Query: 506  tgtgcatt 513
            || |||||
Sbjct: 1314 tgggcatt 1307



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>emb|BX537129.6| Zebrafish DNA sequence from clone CH211-236I20 in linkage group 18,
             complete sequence
          Length = 166655

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 314   tcatttaagaaagtatccagc 334
             |||||||||||||||||||||
Sbjct: 33981 tcatttaagaaagtatccagc 33961



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>gb|AC135398.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0079N13, complete sequence
          Length = 140946

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 353   ggcattaccacaacatgtgatatacttccctcacaagcaagctgccac 400
             ||||||||||||||||| | || | ||||  |||| ||||||||||||
Sbjct: 24322 ggcattaccacaacatgagctacatttcctgcacatgcaagctgccac 24275



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>emb|CR762389.21| Zebrafish DNA sequence from clone DKEY-240O2 in linkage group 5,
             complete sequence
          Length = 110973

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   gacaccaaccaatgtaaata 159
             ||||||||||||||||||||
Sbjct: 72027 gacaccaaccaatgtaaata 72046



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>emb|AL357936.25| Human DNA sequence from clone RP11-524G24 on chromosome 9 Contains the
             5' end of two variants of the DAB2IP gene for DAB2
             interacting protein (AF9Q34, DIP1/2, KIAA1743), a novel
             gene and two CpG islands, complete sequence
          Length = 107529

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 413   tcctcgtcctttggcctctcaaaa 436
             ||||| ||||||||||||||||||
Sbjct: 58113 tcctcctcctttggcctctcaaaa 58090



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>emb|AL118510.6|HSJ858M22 Human DNA sequence from clone RP5-858M22 on chromosome 20 Contains part
             of the C20orf133 gene for chromosome 20 open reading frame
             133 and the RPS10P2 gene for ribosomal protein S10
             pseudogene 2, complete sequence
          Length = 124114

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 524   ttctgaacttccttctgaaa 543
             ||||||||||||||||||||
Sbjct: 51754 ttctgaacttccttctgaaa 51735



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>emb|AL662802.14| Mouse DNA sequence from clone RP23-34N10 on chromosome 11, complete
              sequence
          Length = 224024

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 521    catttctgaacttccttctg 540
              ||||||||||||||||||||
Sbjct: 213446 catttctgaacttccttctg 213465



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>emb|BX005109.23| Zebrafish DNA sequence from clone CH211-284K5 in linkage group 25,
              complete sequence
          Length = 186632

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 510    catttctcaagcatttctga 529
              ||||||||||||||||||||
Sbjct: 152845 catttctcaagcatttctga 152826



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>emb|AL049925.1|HSM800267 Homo sapiens mRNA; cDNA DKFZp564G0982 (from clone DKFZp564G0982)
          Length = 1693

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  tgctaagatctgtctcgtat 56
           ||||||||||||||||||||
Sbjct: 945 tgctaagatctgtctcgtat 926



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>gb|AC104209.7| Homo sapiens chromosome 18, clone RP11-653G8, complete sequence
          Length = 210849

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     tgctactgtgctaagatctg 48
              ||||||||||||||||||||
Sbjct: 155387 tgctactgtgctaagatctg 155368



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>gb|AC012378.10| Homo sapiens chromosome 15 clone RP11-420M1 map 15q21.3, complete
            sequence
          Length = 199289

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   tgctaagatctgtctcgtat 56
            ||||||||||||||||||||
Sbjct: 7363 tgctaagatctgtctcgtat 7382



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>gb|AC022083.6|AC022083 Homo sapiens chromosome 15 clone CTD-2137J4 map 15q21.3, complete
              sequence
          Length = 114149

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     tgctaagatctgtctcgtat 56
              ||||||||||||||||||||
Sbjct: 109842 tgctaagatctgtctcgtat 109861



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                                
Query: 353      ggcattaccacaacatgtgatatacttccctcacaagcaagctgccac 400
                ||||||||||||||||| | || | ||||  |||| ||||||||||||
Sbjct: 15772628 ggcattaccacaacatgagctacatttcctgcacatgcaagctgccac 15772581



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                                
Query: 353      ggcattaccacaacatgtgatatacttccctcacaagcaagctgccac 400
                ||||||||||||||||| | || | ||||  |||| ||||||||||||
Sbjct: 15860005 ggcattaccacaacatgagctacatttcctgcacatgcaagctgccac 15859958



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>emb|AL837510.5| Mouse DNA sequence from clone RP23-200B23 on chromosome 4, complete
             sequence
          Length = 199537

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   acatttgaactcacagagtg 191
             ||||||||||||||||||||
Sbjct: 15151 acatttgaactcacagagtg 15170



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>emb|AL590997.13| Mouse DNA sequence from clone RP23-132J20 on chromosome 11, complete
              sequence
          Length = 200602

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 513    ttctcaagcatttctgaact 532
              ||||||||||||||||||||
Sbjct: 115276 ttctcaagcatttctgaact 115295


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,632,599
Number of Sequences: 3902068
Number of extensions: 5632599
Number of successful extensions: 103332
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103146
Number of HSP's gapped (non-prelim): 173
length of query: 556
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 533
effective length of database: 17,143,297,704
effective search space: 9137377676232
effective search space used: 9137377676232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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