ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal14f09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF521190.1| Triticum aestivum from endosperm nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase mRNA, complete cds Length = 1891 Score = 644 bits (325), Expect = 0.0 Identities = 376/395 (95%), Gaps = 1/395 (0%) Strand = Plus / Minus Query: 1 atctccaaatctcacgtggttacaaaacatttgaattctctacatcgtactcgtg-tgct 59 ||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 1776 atctccaratctcacgtggttacaaaacatttgaattctctacaccgtactcgtggwgct 1717 Query: 60 tatacaacgtctgattcctgtacatgaacgtctcagcccatggtgtaggatggagatggc 119 ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1716 tatacaacgtccgattcctgtacatgaacgtctcagcccatggtgtaggacggagatggg 1657 Query: 120 aggtttatgacagtgctcttcaccttggtcatcatgtttatgctgttggttatcccctgg 179 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1656 aggtttatgacagtgctcttcaccttggtcatcatgtttatgctgttbgttatcccctgg 1597 Query: 180 gatcctattccactgtccttgagaccctggaaggggaaatggtccggtcctcgagccggg 239 |||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||| Sbjct: 1596 gatcctattccactgtccttcagdccctggaaggggaaatggtccggacctcgagccggg 1537 Query: 240 gcagagttgatctgcaccgttccagtctccattgcatcactgatcatgattgccttgttg 299 || |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1536 gcggagttgatctgcacagttccactctccattgcatcactgatcatgattgccttgttg 1477 Query: 300 atgtctctagtgaacacacatccctggagtccaaagttgctggcgttgcaatggtggatg 359 |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1476 atgtctcttgtraacacacatccctggagcccaaagttgctggcgttgcaatggtggatg 1417 Query: 360 ccttcctcaacagagttgatcctgatcactggcaa 394 ||||||||||| ||||||||||||||||| ||||| Sbjct: 1416 ccttcctcaaccgagttgatcctgatcacrggcaa 1382
>gb|AF521191.2| Triticum aestivum from leaf nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase mRNA, complete cds Length = 1491 Score = 498 bits (251), Expect = e-138 Identities = 290/303 (95%) Strand = Plus / Minus Query: 92 tcagcccatggtgtaggatggagatggcaggtttatgacagtgctcttcaccttggtcat 151 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 1491 tcagcccatggtgtaggacggagatgggaggtttatgacagtgctcttcaccttggtcat 1432 Query: 152 catgtttatgctgttggttatcccctgggatcctattccactgtccttgagaccctggaa 211 ||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1431 catgtttatgctgttcgttatcccctgggatcctattccactgtccttcaggccctggaa 1372 Query: 212 ggggaaatggtccggtcctcgagccggggcagagttgatctgcaccgttccagtctccat 271 ||||||||||||||| |||||||||||||| |||||||||||||| |||||| ||||||| Sbjct: 1371 ggggaaatggtccggacctcgagccggggcggagttgatctgcacagttccactctccat 1312 Query: 272 tgcatcactgatcatgattgccttgttgatgtctctagtgaacacacatccctggagtcc 331 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 1311 tgcatcactgatcatgattgccttgttgatgtctcttgtgaacacacatccctggagccc 1252 Query: 332 aaagttgctggcgttgcaatggtggatgccttcctcaacagagttgatcctgatcactgg 391 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 1251 aaagttgctggcgttgcaatggtggatgccttcctcaaccgagttgatcctgatcacggg 1192 Query: 392 caa 394 ||| Sbjct: 1191 caa 1189
>ref|XM_482618.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1967 Score = 424 bits (214), Expect = e-116 Identities = 349/390 (89%), Gaps = 3/390 (0%) Strand = Plus / Minus Query: 6 caaatctcacgtggttacaaaacatttgaattctctacatcgtactcgtgtgcttataca 65 |||| ||||||||||||||||||||||||||||||||||| |||||| |||| ||||| | Sbjct: 1891 caaagctcacgtggttacaaaacatttgaattctctacattgtactcatgtggttataga 1832 Query: 66 acgtctgattcctgtacatg-aacgtctcagcccatggtgtaggatggagatggcaggtt 124 | |||||| | | || ||| ||| |||||||||||||||||||||||||||| ||||| Sbjct: 1831 aa-tctgat-catctatatggaacacctcagcccatggtgtaggatggagatggtaggtt 1774 Query: 125 tatgacagtgctcttcaccttggtcatcatgtttatgctgttggttatcccctgggatcc 184 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1773 tatgacagtgctcttcaccttggtcatcatgtttatgctgttagttatcccctgggatcc 1714 Query: 185 tattccactgtccttgagaccctggaaggggaaatggtccggtcctcgagccggggcaga 244 || ||||||||||| | |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 1713 aatcccactgtccttcaagccctggaaggggaaatggtcaggtcctcgagccggtgcaga 1654 Query: 245 gttgatctgcaccgttccagtctccattgcatcactgatcatgattgccttgttgatgtc 304 ||||||||| || ||||| |||||||| ||||| ||||||||||| || |||||||| || Sbjct: 1653 gttgatctgaacggttccggtctccatcgcatcgctgatcatgatcgctttgttgatatc 1594 Query: 305 tctagtgaacacacatccctggagtccaaagttgctggcgttgcaatggtggatgccttc 364 | ||||||| ||||||||||| || ||||| |||||||| |||||||||||||||||||| Sbjct: 1593 tttagtgaatacacatccctgcagcccaaaattgctggcattgcaatggtggatgccttc 1534 Query: 365 ctcaacagagttgatcctgatcactggcaa 394 ||| || ||||||||||| ||||| ||||| Sbjct: 1533 ctcgaccgagttgatcctaatcacaggcaa 1504
>gb|AF357884.1| Oryza sativa glyceraldehyde-3-phosphate dehydrogenase mRNA, complete cds Length = 1691 Score = 424 bits (214), Expect = e-116 Identities = 349/390 (89%), Gaps = 3/390 (0%) Strand = Plus / Minus Query: 6 caaatctcacgtggttacaaaacatttgaattctctacatcgtactcgtgtgcttataca 65 |||| ||||||||||||||||||||||||||||||||||| |||||| |||| ||||| | Sbjct: 1609 caaagctcacgtggttacaaaacatttgaattctctacattgtactcatgtggttataga 1550 Query: 66 acgtctgattcctgtacatg-aacgtctcagcccatggtgtaggatggagatggcaggtt 124 | |||||| | | || ||| ||| |||||||||||||||||||||||||||| ||||| Sbjct: 1549 aa-tctgat-catctatatggaacacctcagcccatggtgtaggatggagatggtaggtt 1492 Query: 125 tatgacagtgctcttcaccttggtcatcatgtttatgctgttggttatcccctgggatcc 184 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1491 tatgacagtgctcttcaccttggtcatcatgtttatgctgttagttatcccctgggatcc 1432 Query: 185 tattccactgtccttgagaccctggaaggggaaatggtccggtcctcgagccggggcaga 244 || ||||||||||| | |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 1431 aatcccactgtccttcaagccctggaaggggaaatggtcaggtcctcgagccggtgcaga 1372 Query: 245 gttgatctgcaccgttccagtctccattgcatcactgatcatgattgccttgttgatgtc 304 ||||||||| || ||||| |||||||| ||||| ||||||||||| || |||||||| || Sbjct: 1371 gttgatctgaacggttccggtctccatcgcatcgctgatcatgatcgctttgttgatatc 1312 Query: 305 tctagtgaacacacatccctggagtccaaagttgctggcgttgcaatggtggatgccttc 364 | ||||||| ||||||||||| || ||||| |||||||| |||||||||||||||||||| Sbjct: 1311 tttagtgaatacacatccctgcagcccaaaattgctggcattgcaatggtggatgccttc 1252 Query: 365 ctcaacagagttgatcctgatcactggcaa 394 ||| || ||||||||||| ||||| ||||| Sbjct: 1251 ctcgaccgagttgatcctaatcacaggcaa 1222
>dbj|AK071520.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100G04, full insert sequence Length = 1966 Score = 424 bits (214), Expect = e-116 Identities = 349/390 (89%), Gaps = 3/390 (0%) Strand = Plus / Minus Query: 6 caaatctcacgtggttacaaaacatttgaattctctacatcgtactcgtgtgcttataca 65 |||| ||||||||||||||||||||||||||||||||||| |||||| |||| ||||| | Sbjct: 1890 caaagctcacgtggttacaaaacatttgaattctctacattgtactcatgtggttataga 1831 Query: 66 acgtctgattcctgtacatg-aacgtctcagcccatggtgtaggatggagatggcaggtt 124 | |||||| | | || ||| ||| |||||||||||||||||||||||||||| ||||| Sbjct: 1830 aa-tctgat-catctatatggaacacctcagcccatggtgtaggatggagatggtaggtt 1773 Query: 125 tatgacagtgctcttcaccttggtcatcatgtttatgctgttggttatcccctgggatcc 184 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1772 tatgacagtgctcttcaccttggtcatcatgtttatgctgttagttatcccctgggatcc 1713 Query: 185 tattccactgtccttgagaccctggaaggggaaatggtccggtcctcgagccggggcaga 244 || ||||||||||| | |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 1712 aatcccactgtccttcaagccctggaaggggaaatggtcaggtcctcgagccggtgcaga 1653 Query: 245 gttgatctgcaccgttccagtctccattgcatcactgatcatgattgccttgttgatgtc 304 ||||||||| || ||||| |||||||| ||||| ||||||||||| || |||||||| || Sbjct: 1652 gttgatctgaacggttccggtctccatcgcatcgctgatcatgatcgctttgttgatatc 1593 Query: 305 tctagtgaacacacatccctggagtccaaagttgctggcgttgcaatggtggatgccttc 364 | ||||||| ||||||||||| || ||||| |||||||| |||||||||||||||||||| Sbjct: 1592 tttagtgaatacacatccctgcagcccaaaattgctggcattgcaatggtggatgccttc 1533 Query: 365 ctcaacagagttgatcctgatcactggcaa 394 ||| || ||||||||||| ||||| ||||| Sbjct: 1532 ctcgaccgagttgatcctaatcacaggcaa 1503
>dbj|AK062559.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E04, full insert sequence Length = 2272 Score = 424 bits (214), Expect = e-116 Identities = 349/390 (89%), Gaps = 3/390 (0%) Strand = Plus / Minus Query: 6 caaatctcacgtggttacaaaacatttgaattctctacatcgtactcgtgtgcttataca 65 |||| ||||||||||||||||||||||||||||||||||| |||||| |||| ||||| | Sbjct: 2196 caaagctcacgtggttacaaaacatttgaattctctacattgtactcatgtggttataga 2137 Query: 66 acgtctgattcctgtacatg-aacgtctcagcccatggtgtaggatggagatggcaggtt 124 | |||||| | | || ||| ||| |||||||||||||||||||||||||||| ||||| Sbjct: 2136 aa-tctgat-catctatatggaacacctcagcccatggtgtaggatggagatggtaggtt 2079 Query: 125 tatgacagtgctcttcaccttggtcatcatgtttatgctgttggttatcccctgggatcc 184 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2078 tatgacagtgctcttcaccttggtcatcatgtttatgctgttagttatcccctgggatcc 2019 Query: 185 tattccactgtccttgagaccctggaaggggaaatggtccggtcctcgagccggggcaga 244 || ||||||||||| | |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 2018 aatcccactgtccttcaagccctggaaggggaaatggtcaggtcctcgagccggtgcaga 1959 Query: 245 gttgatctgcaccgttccagtctccattgcatcactgatcatgattgccttgttgatgtc 304 ||||||||| || ||||| |||||||| ||||| ||||||||||| || |||||||| || Sbjct: 1958 gttgatctgaacggttccggtctccatcgcatcgctgatcatgatcgctttgttgatatc 1899 Query: 305 tctagtgaacacacatccctggagtccaaagttgctggcgttgcaatggtggatgccttc 364 | ||||||| ||||||||||| || ||||| |||||||| |||||||||||||||||||| Sbjct: 1898 tttagtgaatacacatccctgcagcccaaaattgctggcattgcaatggtggatgccttc 1839 Query: 365 ctcaacagagttgatcctgatcactggcaa 394 ||| || ||||||||||| ||||| ||||| Sbjct: 1838 ctcgaccgagttgatcctaatcacaggcaa 1809
>gb|AY224439.1| Oryza sativa (japonica cultivar-group) isolate 22820 NADH-dependent glyceraldehyde-3-phosphate dehydrogenase mRNA, partial cds Length = 1527 Score = 387 bits (195), Expect = e-104 Identities = 276/303 (91%) Strand = Plus / Minus Query: 92 tcagcccatggtgtaggatggagatggcaggtttatgacagtgctcttcaccttggtcat 151 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1527 tcagcccatggtgtaggatggagatggtaggtttatgacagtgctcttcaccttggtcat 1468 Query: 152 catgtttatgctgttggttatcccctgggatcctattccactgtccttgagaccctggaa 211 ||||||||||||||| ||||||||||||||||| || ||||||||||| | |||||||| Sbjct: 1467 catgtttatgctgttagttatcccctgggatccaatcccactgtccttcaagccctggaa 1408 Query: 212 ggggaaatggtccggtcctcgagccggggcagagttgatctgcaccgttccagtctccat 271 |||||||||||| |||||||||||||| |||||||||||||| || ||||| |||||||| Sbjct: 1407 ggggaaatggtcaggtcctcgagccggtgcagagttgatctgaacggttccggtctccat 1348 Query: 272 tgcatcactgatcatgattgccttgttgatgtctctagtgaacacacatccctggagtcc 331 ||||| ||||||||||| || |||||||| ||| ||||||| ||||||||||| || || Sbjct: 1347 cgcatcgctgatcatgatcgctttgttgatatctttagtgaatacacatccctgcagccc 1288 Query: 332 aaagttgctggcgttgcaatggtggatgccttcctcaacagagttgatcctgatcactgg 391 ||| |||||||| ||||||||||||||||||||||| || ||||||||||| ||||| || Sbjct: 1287 aaaattgctggcattgcaatggtggatgccttcctcgaccgagttgatcctaatcacagg 1228 Query: 392 caa 394 ||| Sbjct: 1227 caa 1225
>gb|BT019175.1| Zea mays clone Contig846.F mRNA sequence Length = 995 Score = 351 bits (177), Expect = 1e-93 Identities = 273/305 (89%) Strand = Plus / Minus Query: 90 tctcagcccatggtgtaggatggagatggcaggtttatgacagtgctcttcaccttggtc 149 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 819 tctcagcccatggtgtaggatggtgacggcaggtttatgacagtgctcttcaccttggtc 760 Query: 150 atcatgtttatgctgttggttatcccctgggatcctattccactgtccttgagaccctgg 209 |||||||| |||||||| |||||||||||||| || || |||||||| || || |||||| Sbjct: 759 atcatgttaatgctgtttgttatcccctgggacccaatgccactgtctttcagtccctgg 700 Query: 210 aaggggaaatggtccggtcctcgagccggggcagagttgatctgcaccgttccagtctcc 269 ||||||||||| || || || |||||||| ||||||||||||||||| |||||||||||| Sbjct: 699 aaggggaaatgatcaggcccacgagccggtgcagagttgatctgcacagttccagtctcc 640 Query: 270 attgcatcactgatcatgattgccttgttgatgtctctagtgaacacacatccctggagt 329 |||||||||||||||| ||||||||||||||||||||| || || | |||||||| || Sbjct: 639 attgcatcactgatcaggattgccttgttgatgtctcttgtaaaaatgcatccctgtagg 580 Query: 330 ccaaagttgctggcgttgcaatggtggatgccttcctcaacagagttgatcctgatcact 389 || || || ||||| |||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 579 ccgaaattactggcattgcaatggtggatgccttcctcaactgagttaatcctaatcaca 520 Query: 390 ggcaa 394 ||||| Sbjct: 519 ggcaa 515
>emb|X75326.1|ZMRNAGAPN Z.mais (KW5330) mRNA for nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase Length = 1746 Score = 343 bits (173), Expect = 3e-91 Identities = 272/305 (89%) Strand = Plus / Minus Query: 90 tctcagcccatggtgtaggatggagatggcaggtttatgacagtgctcttcaccttggtc 149 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1663 tctcagcccatggtgtaggatggtgacggcaggtttatgacagtgctcttcaccttggtc 1604 Query: 150 atcatgtttatgctgttggttatcccctgggatcctattccactgtccttgagaccctgg 209 |||||||| |||||||| |||||||||||||| || || |||||||| || || |||||| Sbjct: 1603 atcatgttaatgctgtttgttatcccctgggacccaatgccactgtctttcagtccctgg 1544 Query: 210 aaggggaaatggtccggtcctcgagccggggcagagttgatctgcaccgttccagtctcc 269 |||| |||||| || || || |||||||| ||||||||||||||||| |||||||||||| Sbjct: 1543 aaggagaaatgatcaggcccacgagccggtgcagagttgatctgcacagttccagtctcc 1484 Query: 270 attgcatcactgatcatgattgccttgttgatgtctctagtgaacacacatccctggagt 329 |||||||||||||||| ||||||||||||||||||||| || || | |||||||| || Sbjct: 1483 attgcatcactgatcaggattgccttgttgatgtctcttgtaaaaatgcatccctgtagg 1424 Query: 330 ccaaagttgctggcgttgcaatggtggatgccttcctcaacagagttgatcctgatcact 389 || || || ||||| |||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 1423 ccgaaattactggcattgcaatggtggatgccttcctcaactgagttaatcctaatcaca 1364 Query: 390 ggcaa 394 ||||| Sbjct: 1363 ggcaa 1359
>gb|AY110423.1| Zea mays CL2087_1 mRNA sequence Length = 1762 Score = 337 bits (170), Expect = 2e-89 Identities = 270/305 (88%) Strand = Plus / Minus Query: 90 tctcagcccatggtgtaggatggagatggcaggtttatgacagtgctcttcaccttggtc 149 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1628 tctcagcccatggtgtaggatggtgacggcaggtttatgacagtgctcttcaccttggtc 1569 Query: 150 atcatgtttatgctgttggttatcccctgggatcctattccactgtccttgagaccctgg 209 |||||||| |||||||| |||||||||||||| || || |||||||| || || |||||| Sbjct: 1568 atcatgttaatgctgtttgttatcccctgggacccaatgccactgtctttcagtccctgg 1509 Query: 210 aaggggaaatggtccggtcctcgagccggggcagagttgatctgcaccgttccagtctcc 269 ||||||||||| || || || |||||||| ||||||||||||||||| |||||||||||| Sbjct: 1508 aaggggaaatgatcaggcccacgagccggtgcagagttgatctgcacagttccagtctcc 1449 Query: 270 attgcatcactgatcatgattgccttgttgatgtctctagtgaacacacatccctggagt 329 |||||||||||||||| ||||||||||||||||||||| || |||||||| || Sbjct: 1448 attgcatcactgatcaggattgccttgttgatgtctcttgtnnnnntgcatccctgtagg 1389 Query: 330 ccaaagttgctggcgttgcaatggtggatgccttcctcaacagagttgatcctgatcact 389 || || || ||||| |||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 1388 ccgaaattactggcattgcaatggtggatgccttcctcaactgagttaatcctaatcaca 1329 Query: 390 ggcaa 394 ||||| Sbjct: 1328 ggcaa 1324
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 220 bits (111), Expect = 3e-54 Identities = 177/195 (90%), Gaps = 3/195 (1%) Strand = Plus / Minus Query: 6 caaatctcacgtggttacaaaacatttgaattctctacatcgtactcgtgtgcttataca 65 |||| ||||||||||||||||||||||||||||||||||| |||||| |||| ||||| | Sbjct: 21443456 caaagctcacgtggttacaaaacatttgaattctctacattgtactcatgtggttataga 21443397 Query: 66 acgtctgattcctgtacatg-aacgtctcagcccatggtgtaggatggagatggcaggtt 124 | |||||| | | || ||| ||| |||||||||||||||||||||||||||| ||||| Sbjct: 21443396 aa-tctgat-catctatatggaacacctcagcccatggtgtaggatggagatggtaggtt 21443339 Query: 125 tatgacagtgctcttcaccttggtcatcatgtttatgctgttggttatcccctgggatcc 184 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 21443338 tatgacagtgctcttcaccttggtcatcatgtttatgctgttagttatcccctgggatcc 21443279 Query: 185 tattccactgtcctt 199 || ||||||||||| Sbjct: 21443278 aatcccactgtcctt 21443264 Score = 145 bits (73), Expect = 1e-31 Identities = 109/121 (90%) Strand = Plus / Minus Query: 205 cctggaaggggaaatggtccggtcctcgagccggggcagagttgatctgcaccgttccag 264 ||||||||||||||||||| |||||||||||||| |||||||||||||| || ||||| | Sbjct: 21443158 cctggaaggggaaatggtcaggtcctcgagccggtgcagagttgatctgaacggttccgg 21443099 Query: 265 tctccattgcatcactgatcatgattgccttgttgatgtctctagtgaacacacatccct 324 ||||||| ||||| ||||||||||| || |||||||| ||| ||||||| |||||||||| Sbjct: 21443098 tctccatcgcatcgctgatcatgatcgctttgttgatatctttagtgaatacacatccct 21443039 Query: 325 g 325 | Sbjct: 21443038 g 21443038 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 330 ccaaagttgctggcgttgcaatggtggatgccttcctcaacagagttgatcctgatcact 389 ||||| |||||||| ||||||||||||||||||||||| || ||||||||||| ||||| Sbjct: 21442936 ccaaaattgctggcattgcaatggtggatgccttcctcgaccgagttgatcctaatcaca 21442877 Query: 390 ggcaa 394 ||||| Sbjct: 21442876 ggcaa 21442872
>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0528B09 Length = 156897 Score = 220 bits (111), Expect = 3e-54 Identities = 177/195 (90%), Gaps = 3/195 (1%) Strand = Plus / Minus Query: 6 caaatctcacgtggttacaaaacatttgaattctctacatcgtactcgtgtgcttataca 65 |||| ||||||||||||||||||||||||||||||||||| |||||| |||| ||||| | Sbjct: 47451 caaagctcacgtggttacaaaacatttgaattctctacattgtactcatgtggttataga 47392 Query: 66 acgtctgattcctgtacatg-aacgtctcagcccatggtgtaggatggagatggcaggtt 124 | |||||| | | || ||| ||| |||||||||||||||||||||||||||| ||||| Sbjct: 47391 aa-tctgat-catctatatggaacacctcagcccatggtgtaggatggagatggtaggtt 47334 Query: 125 tatgacagtgctcttcaccttggtcatcatgtttatgctgttggttatcccctgggatcc 184 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 47333 tatgacagtgctcttcaccttggtcatcatgtttatgctgttagttatcccctgggatcc 47274 Query: 185 tattccactgtcctt 199 || ||||||||||| Sbjct: 47273 aatcccactgtcctt 47259 Score = 145 bits (73), Expect = 1e-31 Identities = 109/121 (90%) Strand = Plus / Minus Query: 205 cctggaaggggaaatggtccggtcctcgagccggggcagagttgatctgcaccgttccag 264 ||||||||||||||||||| |||||||||||||| |||||||||||||| || ||||| | Sbjct: 47153 cctggaaggggaaatggtcaggtcctcgagccggtgcagagttgatctgaacggttccgg 47094 Query: 265 tctccattgcatcactgatcatgattgccttgttgatgtctctagtgaacacacatccct 324 ||||||| ||||| ||||||||||| || |||||||| ||| ||||||| |||||||||| Sbjct: 47093 tctccatcgcatcgctgatcatgatcgctttgttgatatctttagtgaatacacatccct 47034 Query: 325 g 325 | Sbjct: 47033 g 47033 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 330 ccaaagttgctggcgttgcaatggtggatgccttcctcaacagagttgatcctgatcact 389 ||||| |||||||| ||||||||||||||||||||||| || ||||||||||| ||||| Sbjct: 46931 ccaaaattgctggcattgcaatggtggatgccttcctcgaccgagttgatcctaatcaca 46872 Query: 390 ggcaa 394 ||||| Sbjct: 46871 ggcaa 46867
>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0524F03 Length = 167696 Score = 220 bits (111), Expect = 3e-54 Identities = 177/195 (90%), Gaps = 3/195 (1%) Strand = Plus / Minus Query: 6 caaatctcacgtggttacaaaacatttgaattctctacatcgtactcgtgtgcttataca 65 |||| ||||||||||||||||||||||||||||||||||| |||||| |||| ||||| | Sbjct: 143381 caaagctcacgtggttacaaaacatttgaattctctacattgtactcatgtggttataga 143322 Query: 66 acgtctgattcctgtacatg-aacgtctcagcccatggtgtaggatggagatggcaggtt 124 | |||||| | | || ||| ||| |||||||||||||||||||||||||||| ||||| Sbjct: 143321 aa-tctgat-catctatatggaacacctcagcccatggtgtaggatggagatggtaggtt 143264 Query: 125 tatgacagtgctcttcaccttggtcatcatgtttatgctgttggttatcccctgggatcc 184 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 143263 tatgacagtgctcttcaccttggtcatcatgtttatgctgttagttatcccctgggatcc 143204 Query: 185 tattccactgtcctt 199 || ||||||||||| Sbjct: 143203 aatcccactgtcctt 143189 Score = 145 bits (73), Expect = 1e-31 Identities = 109/121 (90%) Strand = Plus / Minus Query: 205 cctggaaggggaaatggtccggtcctcgagccggggcagagttgatctgcaccgttccag 264 ||||||||||||||||||| |||||||||||||| |||||||||||||| || ||||| | Sbjct: 143083 cctggaaggggaaatggtcaggtcctcgagccggtgcagagttgatctgaacggttccgg 143024 Query: 265 tctccattgcatcactgatcatgattgccttgttgatgtctctagtgaacacacatccct 324 ||||||| ||||| ||||||||||| || |||||||| ||| ||||||| |||||||||| Sbjct: 143023 tctccatcgcatcgctgatcatgatcgctttgttgatatctttagtgaatacacatccct 142964 Query: 325 g 325 | Sbjct: 142963 g 142963 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 330 ccaaagttgctggcgttgcaatggtggatgccttcctcaacagagttgatcctgatcact 389 ||||| |||||||| ||||||||||||||||||||||| || ||||||||||| ||||| Sbjct: 142861 ccaaaattgctggcattgcaatggtggatgccttcctcgaccgagttgatcctaatcaca 142802 Query: 390 ggcaa 394 ||||| Sbjct: 142801 ggcaa 142797
>ref|NM_201797.1| Arabidopsis thaliana ALDH11A3; aldehyde dehydrogenase/ oxidoreductase AT2G24270 (ALDH11A3) transcript variant AT2G24270.2 mRNA, complete cds Length = 1806 Score = 210 bits (106), Expect = 3e-51 Identities = 226/266 (84%) Strand = Plus / Minus Query: 117 ggcaggtttatgacagtgctcttcaccttggtcatcatgtttatgctgttggttatcccc 176 |||| ||| ||||||||| ||||||| || ||||||| || ||||| || || | || Sbjct: 1508 ggcaagttaatgacagtggtcttcactttagtcatcaaattgatgctatttgtcacacct 1449 Query: 177 tgggatcctattccactgtccttgagaccctggaaggggaaatggtccggtcctcgagcc 236 || || ||||||||||||||||| || |||||||| ||||| ||||||||||| ||||| Sbjct: 1448 tgtgaccctattccactgtccttaagtccctggaaagggaagtggtccggtccacgagct 1389 Query: 237 ggggcagagttgatctgcaccgttccagtctccattgcatcactgatcatgattgccttg 296 || |||||||||||||| || ||||| |||||||||||||||||||||| ||||||||| Sbjct: 1388 ggcgcagagttgatctgaacggttcctgtctccattgcatcactgatcagtattgccttg 1329 Query: 297 ttgatgtctctagtgaacacacatccctggagtccaaagttgctggcgttgcaatggtgg 356 ||||||||| ||||||| ||||||||||| || ||||||||||| || |||||||| | Sbjct: 1328 ttgatgtctttagtgaatacacatccctgaaggccaaagttgcttgcattgcaatgatta 1269 Query: 357 atgccttcctcaacagagttgatcct 382 || ||||| |||||||| |||||||| Sbjct: 1268 atcccttcttcaacagaattgatcct 1243
>ref|NM_127989.2| Arabidopsis thaliana ALDH11A3; aldehyde dehydrogenase/ oxidoreductase AT2G24270 (ALDH11A3) transcript variant AT2G24270.1 mRNA, complete cds Length = 2038 Score = 210 bits (106), Expect = 3e-51 Identities = 226/266 (84%) Strand = Plus / Minus Query: 117 ggcaggtttatgacagtgctcttcaccttggtcatcatgtttatgctgttggttatcccc 176 |||| ||| ||||||||| ||||||| || ||||||| || ||||| || || | || Sbjct: 1740 ggcaagttaatgacagtggtcttcactttagtcatcaaattgatgctatttgtcacacct 1681 Query: 177 tgggatcctattccactgtccttgagaccctggaaggggaaatggtccggtcctcgagcc 236 || || ||||||||||||||||| || |||||||| ||||| ||||||||||| ||||| Sbjct: 1680 tgtgaccctattccactgtccttaagtccctggaaagggaagtggtccggtccacgagct 1621 Query: 237 ggggcagagttgatctgcaccgttccagtctccattgcatcactgatcatgattgccttg 296 || |||||||||||||| || ||||| |||||||||||||||||||||| ||||||||| Sbjct: 1620 ggcgcagagttgatctgaacggttcctgtctccattgcatcactgatcagtattgccttg 1561 Query: 297 ttgatgtctctagtgaacacacatccctggagtccaaagttgctggcgttgcaatggtgg 356 ||||||||| ||||||| ||||||||||| || ||||||||||| || |||||||| | Sbjct: 1560 ttgatgtctttagtgaatacacatccctgaaggccaaagttgcttgcattgcaatgatta 1501 Query: 357 atgccttcctcaacagagttgatcct 382 || ||||| |||||||| |||||||| Sbjct: 1500 atcccttcttcaacagaattgatcct 1475
>gb|AY136409.1| Arabidopsis thaliana putative NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (At2g24270) mRNA, complete cds Length = 1877 Score = 210 bits (106), Expect = 3e-51 Identities = 226/266 (84%) Strand = Plus / Minus Query: 117 ggcaggtttatgacagtgctcttcaccttggtcatcatgtttatgctgttggttatcccc 176 |||| ||| ||||||||| ||||||| || ||||||| || ||||| || || | || Sbjct: 1669 ggcaagttaatgacagtggtcttcactttagtcatcaaattgatgctatttgtcacacct 1610 Query: 177 tgggatcctattccactgtccttgagaccctggaaggggaaatggtccggtcctcgagcc 236 || || ||||||||||||||||| || |||||||| ||||| ||||||||||| ||||| Sbjct: 1609 tgtgaccctattccactgtccttaagtccctggaaagggaagtggtccggtccacgagct 1550 Query: 237 ggggcagagttgatctgcaccgttccagtctccattgcatcactgatcatgattgccttg 296 || |||||||||||||| || ||||| |||||||||||||||||||||| ||||||||| Sbjct: 1549 ggcgcagagttgatctgaacggttcctgtctccattgcatcactgatcagtattgccttg 1490 Query: 297 ttgatgtctctagtgaacacacatccctggagtccaaagttgctggcgttgcaatggtgg 356 ||||||||| ||||||| ||||||||||| || ||||||||||| || |||||||| | Sbjct: 1489 ttgatgtctttagtgaatacacatccctgaaggccaaagttgcttgcattgcaatgatta 1430 Query: 357 atgccttcctcaacagagttgatcct 382 || ||||| |||||||| |||||||| Sbjct: 1429 atcccttcttcaacagaattgatcct 1404
>gb|DQ268762.1| Arabidopsis thaliana non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN) mRNA, complete cds Length = 1491 Score = 210 bits (106), Expect = 3e-51 Identities = 226/266 (84%) Strand = Plus / Minus Query: 117 ggcaggtttatgacagtgctcttcaccttggtcatcatgtttatgctgttggttatcccc 176 |||| ||| ||||||||| ||||||| || ||||||| || ||||| || || | || Sbjct: 1466 ggcaagttaatgacagtggtcttcactttagtcatcaaattgatgctatttgtcacacct 1407 Query: 177 tgggatcctattccactgtccttgagaccctggaaggggaaatggtccggtcctcgagcc 236 || || ||||||||||||||||| || |||||||| ||||| ||||||||||| ||||| Sbjct: 1406 tgtgaccctattccactgtccttaagtccctggaaagggaagtggtccggtccacgagct 1347 Query: 237 ggggcagagttgatctgcaccgttccagtctccattgcatcactgatcatgattgccttg 296 || |||||||||||||| || ||||| |||||||||||||||||||||| ||||||||| Sbjct: 1346 ggcgcagagttgatctgaacggttcctgtctccattgcatcactgatcagtattgccttg 1287 Query: 297 ttgatgtctctagtgaacacacatccctggagtccaaagttgctggcgttgcaatggtgg 356 ||||||||| ||||||| ||||||||||| || ||||||||||| || |||||||| | Sbjct: 1286 ttgatgtctttagtgaatacacatccctgaaggccaaagttgcttgcattgcaatgatta 1227 Query: 357 atgccttcctcaacagagttgatcct 382 || ||||| |||||||| |||||||| Sbjct: 1226 atcccttcttcaacagaattgatcct 1201
>gb|AY037205.1| Arabidopsis thaliana At2g24270/F27D4.18 mRNA, complete cds Length = 1816 Score = 210 bits (106), Expect = 3e-51 Identities = 226/266 (84%) Strand = Plus / Minus Query: 117 ggcaggtttatgacagtgctcttcaccttggtcatcatgtttatgctgttggttatcccc 176 |||| ||| ||||||||| ||||||| || ||||||| || ||||| || || | || Sbjct: 1584 ggcaagttaatgacagtggtcttcactttagtcatcaaattgatgctatttgtcacacct 1525 Query: 177 tgggatcctattccactgtccttgagaccctggaaggggaaatggtccggtcctcgagcc 236 || || ||||||||||||||||| || |||||||| ||||| ||||||||||| ||||| Sbjct: 1524 tgtgaccctattccactgtccttaagtccctggaaagggaagtggtccggtccacgagct 1465 Query: 237 ggggcagagttgatctgcaccgttccagtctccattgcatcactgatcatgattgccttg 296 || |||||||||||||| || ||||| |||||||||||||||||||||| ||||||||| Sbjct: 1464 ggcgcagagttgatctgaacggttcctgtctccattgcatcactgatcagtattgccttg 1405 Query: 297 ttgatgtctctagtgaacacacatccctggagtccaaagttgctggcgttgcaatggtgg 356 ||||||||| ||||||| ||||||||||| || ||||||||||| || |||||||| | Sbjct: 1404 ttgatgtctttagtgaatacacatccctgaaggccaaagttgcttgcattgcaatgatta 1345 Query: 357 atgccttcctcaacagagttgatcct 382 || ||||| |||||||| |||||||| Sbjct: 1344 atcccttcttcaacagaattgatcct 1319
>emb|BX820060.1|CNS0AAC0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZB03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1600 Score = 210 bits (106), Expect = 3e-51 Identities = 226/266 (84%) Strand = Plus / Minus Query: 117 ggcaggtttatgacagtgctcttcaccttggtcatcatgtttatgctgttggttatcccc 176 |||| ||| ||||||||| ||||||| || ||||||| || ||||| || || | || Sbjct: 1483 ggcaagttaatgacagtggtcttcactttagtcatcaaattgatgctatttgtcacacct 1424 Query: 177 tgggatcctattccactgtccttgagaccctggaaggggaaatggtccggtcctcgagcc 236 || || ||||||||||||||||| || |||||||| ||||| ||||||||||| ||||| Sbjct: 1423 tgtgaccctattccactgtccttaagtccctggaaagggaagtggtccggtccacgagct 1364 Query: 237 ggggcagagttgatctgcaccgttccagtctccattgcatcactgatcatgattgccttg 296 || |||||||||||||| || ||||| |||||||||||||||||||||| ||||||||| Sbjct: 1363 ggcgcagagttgatctgaacggttcctgtctccattgcatcactgatcagtattgccttg 1304 Query: 297 ttgatgtctctagtgaacacacatccctggagtccaaagttgctggcgttgcaatggtgg 356 ||||||||| ||||||| ||||||||||| || ||||||||||| || |||||||| | Sbjct: 1303 ttgatgtctttagtgaatacacatccctgaaggccaaagttgcttgcattgcaatgatta 1244 Query: 357 atgccttcctcaacagagttgatcct 382 || ||||| |||||||| |||||||| Sbjct: 1243 atcccttcttcaacagaattgatcct 1218
>emb|BX821839.1|CNS0A9AZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL79ZB07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 733 Score = 210 bits (106), Expect = 3e-51 Identities = 226/266 (84%) Strand = Plus / Minus Query: 117 ggcaggtttatgacagtgctcttcaccttggtcatcatgtttatgctgttggttatcccc 176 |||| ||| ||||||||| ||||||| || ||||||| || ||||| || || | || Sbjct: 501 ggcaagttaatgacagtggtcttcactttagtcatcaaattgatgctatttgtcacacct 442 Query: 177 tgggatcctattccactgtccttgagaccctggaaggggaaatggtccggtcctcgagcc 236 || || ||||||||||||||||| || |||||||| ||||| ||||||||||| ||||| Sbjct: 441 tgtgaccctattccactgtccttaagtccctggaaagggaagtggtccggtccacgagct 382 Query: 237 ggggcagagttgatctgcaccgttccagtctccattgcatcactgatcatgattgccttg 296 || |||||||||||||| || ||||| |||||||||||||||||||||| ||||||||| Sbjct: 381 ggcgcagagttgatctgaacggttcctgtctccattgcatcactgatcagtattgccttg 322 Query: 297 ttgatgtctctagtgaacacacatccctggagtccaaagttgctggcgttgcaatggtgg 356 ||||||||| ||||||| ||||||||||| || ||||||||||| || |||||||| | Sbjct: 321 ttgatgtctttagtgaatacacatccctgaaggccaaagttgcttgcattgcaatgatta 262 Query: 357 atgccttcctcaacagagttgatcct 382 || ||||| |||||||| |||||||| Sbjct: 261 atcccttcttcaacagaattgatcct 236
>gb|BT004551.1| Arabidopsis thaliana At2g24270/F27D4.18 gene, complete cds Length = 1491 Score = 210 bits (106), Expect = 3e-51 Identities = 226/266 (84%) Strand = Plus / Minus Query: 117 ggcaggtttatgacagtgctcttcaccttggtcatcatgtttatgctgttggttatcccc 176 |||| ||| ||||||||| ||||||| || ||||||| || ||||| || || | || Sbjct: 1466 ggcaagttaatgacagtggtcttcactttagtcatcaaattgatgctatttgtcacacct 1407 Query: 177 tgggatcctattccactgtccttgagaccctggaaggggaaatggtccggtcctcgagcc 236 || || ||||||||||||||||| || |||||||| ||||| ||||||||||| ||||| Sbjct: 1406 tgtgaccctattccactgtccttaagtccctggaaagggaagtggtccggtccacgagct 1347 Query: 237 ggggcagagttgatctgcaccgttccagtctccattgcatcactgatcatgattgccttg 296 || |||||||||||||| || ||||| |||||||||||||||||||||| ||||||||| Sbjct: 1346 ggcgcagagttgatctgaacggttcctgtctccattgcatcactgatcagtattgccttg 1287 Query: 297 ttgatgtctctagtgaacacacatccctggagtccaaagttgctggcgttgcaatggtgg 356 ||||||||| ||||||| ||||||||||| || ||||||||||| || |||||||| | Sbjct: 1286 ttgatgtctttagtgaatacacatccctgaaggccaaagttgcttgcattgcaatgatta 1227 Query: 357 atgccttcctcaacagagttgatcct 382 || ||||| |||||||| |||||||| Sbjct: 1226 atcccttcttcaacagaattgatcct 1201
>gb|U87848.1|NPU87848 Nicotiana plumbaginifolia non-phosphorylating glyceraldehyde dehydrogenase (GapN) mRNA, complete cds Length = 1788 Score = 176 bits (89), Expect = 4e-41 Identities = 218/261 (83%) Strand = Plus / Minus Query: 116 tggcaggtttatgacagtgctcttcaccttggtcatcatgtttatgctgttggttatccc 175 ||||| ||| || |||||| |||| || |||||||||||||| |||||||| |||||||| Sbjct: 1568 tggcaagttgataacagtggtcttgactttggtcatcatgttaatgctgttagttatccc 1509 Query: 176 ctgggatcctattccactgtccttgagaccctggaaggggaaatggtccggtcctcgagc 235 || ||||| |||||||||||||| | |||||||| |||||||| |||||||| ||||| Sbjct: 1508 ttgtgatccaattccactgtccttaattccctggaatgggaaatgatccggtccacgagc 1449 Query: 236 cggggcagagttgatctgcaccgttccagtctccattgcatcactgatcatgattgcctt 295 ||| || ||||| ||||| || ||||| || ||||| ||||||||||||| ||||| || Sbjct: 1448 cggagctgagttaatctgaactgttcctgtttccatggcatcactgatcagtattgcttt 1389 Query: 296 gttgatgtctctagtgaacacacatccctggagtccaaagttgctggcgttgcaatggtg 355 |||||||||| | ||||| ||||| ||||| || || || ||||| || ||||| ||||| Sbjct: 1388 gttgatgtctttggtgaatacacaaccctgcagaccgaaattgctagcattgcagtggtg 1329 Query: 356 gatgccttcctcaacagagtt 376 || ||||| || |||||||| Sbjct: 1328 aattccttcttcgacagagtt 1308
>emb|X75327.1|PSRNAGAPN P.sativum (Rosakrone) mRNA for nonphosphorylating, NADP-specific, glyceraldehyde-3-phosphate dehydrogenase Length = 1631 Score = 159 bits (80), Expect = 8e-36 Identities = 215/260 (82%) Strand = Plus / Minus Query: 138 ttcaccttggtcatcatgtttatgctgttggttatcccctgggatcctattccactgtcc 197 ||||| || ||||||||||||||||||||||| || ||||||||||| |||||||||||| Sbjct: 1523 ttcacttttgtcatcatgtttatgctgttggtaattccctgggatccaattccactgtcc 1464 Query: 198 ttgagaccctggaaggggaaatggtccggtcctcgagccggggcagagttgatctgcacc 257 || | ||||| ||||| ||||| |||||||| ||||| || || ||||| ||||| || Sbjct: 1463 tttattccctgaaagggaaaatgatccggtccacgagctggtgcggagtttatctgaact 1404 Query: 258 gttccagtctccattgcatcactgatcatgattgccttgttgatgtctctagtgaacaca 317 ||||| | ||||| |||||||| ||||| ||||| || ||||| || | ||||| ||| Sbjct: 1403 gttcctgattccatcgcatcactaatcattattgctttattgatatccttcgtgaataca 1344 Query: 318 catccctggagtccaaagttgctggcgttgcaatggtggatgccttcctcaacagagttg 377 |||||||| ||||| |||||||| || || ||||| || || ||||| ||||| || ||| Sbjct: 1343 catccctgaagtccgaagttgctagcattacaatgatgaataccttcttcaaccgaattg 1284 Query: 378 atcctgatcactggcaaaac 397 ||||| || || |||||||| Sbjct: 1283 atcctaataacaggcaaaac 1264
>gb|AF196292.1|AF196292 Apium graveolens nonreversible glyceraldehyde-3-phosphate dehydrogenase mRNA, complete cds Length = 1734 Score = 157 bits (79), Expect = 3e-35 Identities = 247/303 (81%) Strand = Plus / Minus Query: 94 agcccatggtgtaggatggagatggcaggtttatgacagtgctcttcaccttggtcatca 153 |||||||||| || || || || |||| ||| || |||||| |||| | ||| ||||||| Sbjct: 1592 agcccatggtataagaaggggaaggcaagttaataacagtggtcttaatctttgtcatca 1533 Query: 154 tgtttatgctgttggttatcccctgggatcctattccactgtccttgagaccctggaagg 213 | || |||||||| || || ||||| ||||| ||||||||||| || | |||||||| | Sbjct: 1532 tattgatgctgtttgtgatgccctgcgatccaattccactgtctttcaatccctggaatg 1473 Query: 214 ggaaatggtccggtcctcgagccggggcagagttgatctgcaccgttccagtctccattg 273 | ||||| || || || ||||| || || ||||| || || | |||||| | |||||| | Sbjct: 1472 gaaaatgatctggaccgcgagctggagctgagttaatttgaatcgttcccgactccatag 1413 Query: 274 catcactgatcatgattgccttgttgatgtctctagtgaacacacatccctggagtccaa 333 |||||||||| | ||||| ||||||||||| || ||||| ||||| |||||||| |||| Sbjct: 1412 catcactgattaacattgctttgttgatgtccctggtgaagacacaaccctggaggccaa 1353 Query: 334 agttgctggcgttgcaatggtggatgccttcctcaacagagttgatcctgatcactggca 393 ||||||| || |||||||||||||| ||||| ||| |||||||||| ||||| ||||| | Sbjct: 1352 agttgctagcattgcaatggtggattccttcttcagcagagttgattctgataactggta 1293 Query: 394 aaa 396 ||| Sbjct: 1292 aaa 1290
>gb|BT014212.1| Lycopersicon esculentum clone 133389F, mRNA sequence Length = 1806 Score = 153 bits (77), Expect = 5e-34 Identities = 209/253 (82%) Strand = Plus / Minus Query: 129 acagtgctcttcaccttggtcatcatgtttatgctgttggttatcccctgggatcctatt 188 |||||| ||||||| || ||||||||||| || ||||| || ||||| || ||||| ||| Sbjct: 1559 acagtggtcttcactttagtcatcatgttaatactgttagtgatcccttgtgatccaatt 1500 Query: 189 ccactgtccttgagaccctggaaggggaaatggtccggtcctcgagccggggcagagttg 248 || |||||||| | ||||||||| || ||||| |||||||| ||||| || || ||||| Sbjct: 1499 ccgctgtccttaataccctggaacggaaaatgatccggtccacgagcaggagctgagtta 1440 Query: 249 atctgcaccgttccagtctccattgcatcactgatcatgattgccttgttgatgtctcta 308 ||||| || ||||| || ||||||||||||||||||| ||||| |||||||||||| | Sbjct: 1439 atctgaacggttccggtttccattgcatcactgatcagtattgctttgttgatgtctttg 1380 Query: 309 gtgaacacacatccctggagtccaaagttgctggcgttgcaatggtggatgccttcctca 368 ||||||||||| ||||| || || || ||||| || ||||| ||||| || ||||| || Sbjct: 1379 gtgaacacacaaccctgcagaccgaaattgctagcattgcagtggtgaattccttcttcg 1320 Query: 369 acagagttgatcc 381 || ||||| |||| Sbjct: 1319 actgagtttatcc 1307
>gb|AC005967.3| Arabidopsis thaliana chromosome 2 clone F27D4 map CIC06C07, complete sequence Length = 96046 Score = 143 bits (72), Expect = 5e-31 Identities = 108/120 (90%) Strand = Plus / Plus Query: 205 cctggaaggggaaatggtccggtcctcgagccggggcagagttgatctgcaccgttccag 264 ||||||| ||||| ||||||||||| ||||| || |||||||||||||| || ||||| | Sbjct: 86483 cctggaaagggaagtggtccggtccacgagctggcgcagagttgatctgaacggttcctg 86542 Query: 265 tctccattgcatcactgatcatgattgccttgttgatgtctctagtgaacacacatccct 324 ||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||| Sbjct: 86543 tctccattgcatcactgatcagtattgccttgttgatgtctttagtgaatacacatccct 86602 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 330 ccaaagttgctggcgttgcaatggtggatgccttcctcaacagagttgatcct 382 ||||||||||| || |||||||| | || ||||| |||||||| |||||||| Sbjct: 86688 ccaaagttgcttgcattgcaatgattaatcccttcttcaacagaattgatcct 86740 Score = 40.1 bits (20), Expect = 5.3 Identities = 74/92 (80%) Strand = Plus / Plus Query: 117 ggcaggtttatgacagtgctcttcaccttggtcatcatgtttatgctgttggttatcccc 176 |||| ||| ||||||||| ||||||| || ||||||| || ||||| || || | || Sbjct: 86315 ggcaagttaatgacagtggtcttcactttagtcatcaaattgatgctatttgtcacacct 86374 Query: 177 tgggatcctattccactgtccttgagaccctg 208 || || ||||||||||||||||| || ||||| Sbjct: 86375 tgtgaccctattccactgtccttaagtccctg 86406
>gb|U34988.1| Pisum sativum non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (gapN) gene, complete cds Length = 4307 Score = 83.8 bits (42), Expect = 4e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 138 ttcaccttggtcatcatgtttatgctgttggttatcccctgggatcctattccactgtcc 197 ||||| || ||||||||||||||||||||||| || ||||||||||| |||||||||||| Sbjct: 3440 ttcacttttgtcatcatgtttatgctgttggtaattccctgggatccaattccactgtcc 3381 Query: 198 tt 199 || Sbjct: 3380 tt 3379 Score = 58.0 bits (29), Expect = 2e-05 Identities = 98/121 (80%) Strand = Plus / Minus Query: 205 cctggaaggggaaatggtccggtcctcgagccggggcagagttgatctgcaccgttccag 264 |||| ||||| ||||| |||||||| ||||| || || ||||| ||||| || ||||| | Sbjct: 3276 cctgaaagggaaaatgatccggtccacgagctggtgcggagtttatctgaactgttcctg 3217 Query: 265 tctccattgcatcactgatcatgattgccttgttgatgtctctagtgaacacacatccct 324 ||||| |||||||| ||||| ||||| || ||||| || | ||||| |||||||||| Sbjct: 3216 attccatcgcatcactaatcattattgctttattgatatccttcgtgaatacacatccct 3157 Query: 325 g 325 | Sbjct: 3156 g 3156
>gb|AC151727.27| Medicago truncatula clone mth2-25p23, complete sequence Length = 123526 Score = 73.8 bits (37), Expect = 4e-10 Identities = 100/121 (82%) Strand = Plus / Minus Query: 205 cctggaaggggaaatggtccggtcctcgagccggggcagagttgatctgcaccgttccag 264 |||| ||||| ||||| || || || ||||| |||||||| || ||||| || ||||| | Sbjct: 104960 cctgaaagggaaaatgatctggcccacgagctggggcagaatttatctgaactgttcctg 104901 Query: 265 tctccattgcatcactgatcatgattgccttgttgatgtctctagtgaacacacatccct 324 |||||||||||||| ||||| ||||| |||||||| || | |||||||||||||||| Sbjct: 104900 attccattgcatcactaatcatcattgctttgttgatatcctttgtgaacacacatccct 104841 Query: 325 g 325 | Sbjct: 104840 g 104840 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 322 cctggagtccaaagttgctggcgttgcaatggtggatgccttcctcaacagagttgatcc 381 |||| ||||||||||| || || || ||||||||||||||||| |||||||| ||||||| Sbjct: 104766 cctgaagtccaaagttactagcattacaatggtggatgccttcttcaacagaattgatcc 104707 Query: 382 tgatcactggcaaaac 397 | || || |||||||| Sbjct: 104706 taattacaggcaaaac 104691 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 147 gtcatcatgtttatgctgttggttatcccctgggatcctattccactgtc 196 ||||||||||||||||||||||| || || || ||||| ||||||||||| Sbjct: 105242 gtcatcatgtttatgctgttggtaattccttgtgatccaattccactgtc 105193
>gb|AC169120.12| Medicago truncatula clone mth2-84o2, complete sequence Length = 118165 Score = 73.8 bits (37), Expect = 4e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 205 cctggaaggggaaatggtccggtcctcgagccggggcagagttgatctgcaccgttccag 264 |||| ||||| ||||| || || || ||||| |||||||| || ||||| || ||||| | Sbjct: 89944 cctgaaagggaaaatgatctggcccacgagctggggcagaatttatctgaactgttcctg 90003 Query: 265 tctccattgcatcactgatcatgattgccttgttgatgtctctagtgaacacacatccct 324 |||||||||||||| ||||| ||||| |||||||| || | |||||||||||||||| Sbjct: 90004 attccattgcatcactaatcatcattgctttgttgatatcctttgtgaacacacatccct 90063 Query: 325 g 325 | Sbjct: 90064 g 90064 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 322 cctggagtccaaagttgctggcgttgcaatggtggatgccttcctcaacagagttgatcc 381 |||| ||||||||||| || || || ||||||||||||||||| |||||||| ||||||| Sbjct: 90138 cctgaagtccaaagttactagcattacaatggtggatgccttcttcaacagaattgatcc 90197 Query: 382 tgatcactggcaaaac 397 | || || |||||||| Sbjct: 90198 taattacaggcaaaac 90213 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 147 gtcatcatgtttatgctgttggttatcccctgggatcctattccactgtc 196 ||||||||||||||||||||||| || || || ||||| ||||||||||| Sbjct: 89662 gtcatcatgtttatgctgttggtaattccttgtgatccaattccactgtc 89711
>gb|AY504666.1| Physcomitrella patens non-phosphorylating GAPDH (ALDH11A5) mRNA, complete cds Length = 1883 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/120 (82%) Strand = Plus / Minus Query: 266 ctccattgcatcactgatcatgattgccttgttgatgtctctagtgaacacacatccctg 325 |||||| |||||||||| || ||||| |||||||||||| | ||||| || |||||||| Sbjct: 1437 ctccatagcatcactgaccagaattgctttgttgatgtctttggtgaagacgcatccctg 1378 Query: 326 gagtccaaagttgctggcgttgcaatggtggatgccttcctcaacagagttgatcctgat 385 || |||||||| | |||||||| ||||| ||||| ||||| || | ||||||||||| Sbjct: 1377 aagagcaaagttgtttgcgttgcagtggtgaatgccctcctccacggtcttgatcctgat 1318
>gb|AC160629.6| Medicago truncatula clone mth2-24p23, complete sequence Length = 64145 Score = 65.9 bits (33), Expect = 9e-08 Identities = 84/101 (83%) Strand = Plus / Plus Query: 225 ggtcctcgagccggggcagagttgatctgcaccgttccagtctccattgcatcactgatc 284 ||||| ||||| || ||||| || || || || ||||| ||||||||||||||||| ||| Sbjct: 57711 ggtccgcgagctggtgcagaattaatttgaactgttcctgtctccattgcatcacttatc 57770 Query: 285 atgattgccttgttgatgtctctagtgaacacacatccctg 325 | ||||| ||||| |||||| | || |||||||||||||| Sbjct: 57771 aacattgctttgtttatgtctttcgtaaacacacatccctg 57811
>gb|AC113932.2| Homo sapiens chromosome 3 clone RP11-757H2, complete sequence Length = 194645 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 gtgaacacacatccctggagt 329 ||||||||||||||||||||| Sbjct: 69167 gtgaacacacatccctggagt 69187
>gb|AC020626.6|AC020626 Homo sapiens 3 BAC RP11-41F5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170346 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 gtgaacacacatccctggagt 329 ||||||||||||||||||||| Sbjct: 4990 gtgaacacacatccctggagt 4970
>ref|XM_755408.1| Ustilago maydis 521 hypothetical protein (UM04354.1) partial mRNA Length = 3624 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 caaagttgctggcgttgcaa 350 |||||||||||||||||||| Sbjct: 1386 caaagttgctggcgttgcaa 1367
>gb|AC123057.4| Mus musculus BAC clone RP23-184N6 from 3, complete sequence Length = 223068 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 cttggtcatcatgtttatgc 162 |||||||||||||||||||| Sbjct: 154418 cttggtcatcatgtttatgc 154437
>emb|AL356575.8| Human DNA sequence from clone RP11-340C20 on chromosome 13 Contains part of the PCCA gene for propionyl Coenzyme A carboxylase alpha polypeptide, and a ribosomal protein L15 (RPL15) pseudogene, complete sequence Length = 158527 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aaaacatttgaattctctac 43 |||||||||||||||||||| Sbjct: 60676 aaaacatttgaattctctac 60657
>ref|XM_782921.1| PREDICTED: Strongylocentrotus purpuratus similar to CG6184-PA, isoform A (LOC582993), partial mRNA Length = 1299 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cgtctgattcctgtacatga 86 |||||||||||||||||||| Sbjct: 967 cgtctgattcctgtacatga 948
>gb|AY623766.1| Rattus norvegicus Defa14-ps pseudogene, complete sequence Length = 4740 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 gatgtctctagtgaacacacatcc 322 |||||||||||||||| ||||||| Sbjct: 942 gatgtctctagtgaactcacatcc 919
>gb|AC010587.6| Homo sapiens chromosome 5 clone CTC-394G3, complete sequence Length = 94536 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 caccttggtcatcatgttta 159 |||||||||||||||||||| Sbjct: 93494 caccttggtcatcatgttta 93513
>gb|AC010372.6| Homo sapiens chromosome 5 clone CTD-2049O16, complete sequence Length = 125174 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 caccttggtcatcatgttta 159 |||||||||||||||||||| Sbjct: 73218 caccttggtcatcatgttta 73199
>gb|AC007221.2|AC007221 Homo sapiens chromosome 16 clone RPCI-11_418I22, complete sequence Length = 230696 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tccagtctccattgcatcac 279 |||||||||||||||||||| Sbjct: 79573 tccagtctccattgcatcac 79554
>emb|BX004964.9| Zebrafish DNA sequence from clone DKEY-7I4, complete sequence Length = 211018 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ttgcatcactgatcatgatt 290 |||||||||||||||||||| Sbjct: 131764 ttgcatcactgatcatgatt 131745 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,275,308 Number of Sequences: 3902068 Number of extensions: 3275308 Number of successful extensions: 62914 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 42 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62812 Number of HSP's gapped (non-prelim): 100 length of query: 398 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 376 effective length of database: 17,147,199,772 effective search space: 6447347114272 effective search space used: 6447347114272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
