>ATG2_MAGGR (Q51ZN8) Autophagy-related protein 2|
          Length = 2077

 Score = 37.0 bits (84), Expect = 0.052
 Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
 Frame = -1

Query: 652 TIAESAGLVSSEMSESGGLEPSKSPEETNAETVPKKNE------LPIASANNPPAGPSTT 491
           ++  + GL  S+ S + G +  K+    +A T+ ++++      +P +S  N  AGP ++
Sbjct: 506 SLGATYGLEDSQASSTIGFQGLKTSPGLDASTISEQSDSSPAPIIPPSSDGNTEAGPESS 565

Query: 490 VQGDMHRSGNQNP 452
           +QG+ H   +Q+P
Sbjct: 566 IQGERHDRKSQSP 578

>MIA40_DEBHA (Q6BSK8) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 249

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 19/48 (39%), Positives = 20/48 (41%)
 Frame = +3

Query: 195 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIAC 338
           WD  C G    GP GE F + F  FI   S P     CI  F S   C
Sbjct: 144 WDCPCLGGMAHGPCGEEFKEAFACFIYSESEPKGI-ECIKKFESMRNC 190

>MUCB1_XENLA (P38565) Integumentary mucin B.1 (FIM-B.1) (Fragment)|
          Length = 398

 Score = 34.3 bits (77), Expect = 0.34
 Identities = 24/72 (33%), Positives = 34/72 (47%)
 Frame = -1

Query: 655 PTIAESAGLVSSEMSESGGLEPSKSPEETNAETVPKKNELPIASANNPPAGPSTTVQGDM 476
           P  +E+ G  +   SE+ G E + +P ET  E+ P  +E  + S  + PA   TTV    
Sbjct: 23  PAPSETTGESTPAPSETTG-ESTPAPSETTGESTPAPSETTVPSGESTPAPSETTVPS-- 79

Query: 475 HRSGNQNPYWSE 440
             SG   P  SE
Sbjct: 80  VPSGESTPAPSE 91

>MIA40_SCHPO (P87059) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 313

 Score = 34.3 bits (77), Expect = 0.34
 Identities = 17/48 (35%), Positives = 20/48 (41%)
 Frame = +3

Query: 195 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIAC 338
           WD  C G    GP GE F   F  F+   S P     C+  F +  AC
Sbjct: 197 WDCPCLGGMAHGPCGEEFKAAFSCFVYSKSEPKG-MECLDKFQAMQAC 243

>UBP25_HUMAN (Q9UHP3) Ubiquitin carboxyl-terminal hydrolase 25 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 25)
           (Ubiquitin-specific-processing protease 25)
           (Deubiquitinating enzyme 25) (USP on chromosome 21)
          Length = 1087

 Score = 33.9 bits (76), Expect = 0.44
 Identities = 32/124 (25%), Positives = 47/124 (37%)
 Frame = -1

Query: 655 PTIAESAGLVSSEMSESGGLEPSKSPEETNAETVPKKNELPIASANNPPAGPSTTVQGDM 476
           P+  E  G +SSE+       PS SP    A +       P   +  PP  P        
Sbjct: 488 PSTTEQQGALSSEL-------PSTSPSSVAAISSRSVIHKPFTQSRIPPDLPMHPAP--R 538

Query: 475 HRSGNQNPYWSERYDRLQTYLENCDRSSQEGYMRMLRTLSAAGRSMHAIELEKRAIHLLV 296
           H +  +         R +T +EN  R  QE   R+ RT+         I++  R   +LV
Sbjct: 539 HITEEELSVLESCLHRWRTEIENDTRDLQESISRIHRTIELMYSDKSMIQVPYRLHAVLV 598

Query: 295 EEGK 284
            EG+
Sbjct: 599 HEGQ 602

>MIA40_CANAL (O94030) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 252

 Score = 33.9 bits (76), Expect = 0.44
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = +3

Query: 195 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIACMLR 347
           WD  C G    GP GE F + F  F+   + P     CI  F +  +C  R
Sbjct: 150 WDCPCLGGMAHGPCGEEFKEAFSCFVFSETEPKGI-DCIKKFENMRSCFKR 199

>MIA40_KLULA (Q6CSA1) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 406

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +3

Query: 195 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIAC 338
           WD  C G    GP GE F   F  F+   + P     C+  FS+   C
Sbjct: 280 WDCPCLGGMAYGPCGEEFKSAFSCFVYSEADPKGI-NCVEKFSTMQNC 326

>MIA40_ASPFU (Q4WGL2) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 297

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 17/51 (33%), Positives = 19/51 (37%)
 Frame = +3

Query: 195 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIACMLR 347
           WD  C G    GP GE F   F  F+  +  P     CI  F     C  R
Sbjct: 150 WDCPCLGGMAHGPCGEEFKAAFSCFVYSTEEPKG-MDCIDKFKGMQECFRR 199

>MIA40_CRYNE (Q5KGA4) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 242

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 16/48 (33%), Positives = 19/48 (39%)
 Frame = +3

Query: 195 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIAC 338
           WD  C G    GP GE F   F  F+   + P     C+ LF     C
Sbjct: 142 WDCPCLGGMATGPCGEQFKAAFSCFVYSEAEPKGV-DCVELFKVMQDC 188

>MIA40_NEUCR (Q7S3S2) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 298

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 17/48 (35%), Positives = 19/48 (39%)
 Frame = +3

Query: 195 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIAC 338
           WD  C G    GP GE F   F  F+  +  P     CI  FS    C
Sbjct: 189 WDCPCLGGMAHGPCGEEFKAAFSCFVYSTEEPKG-MDCIEKFSHMQDC 235

>YA99_SCHPO (Q09787) Hypothetical protein C13G6.09 in chromosome I|
          Length = 274

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = -1

Query: 622 SEMSESGGLEPSKSPEETNAETVPKKNELPIASANNPPAGPSTTVQGDM 476
           +++ +S  +E    P+E N + +P+K +       NP A P T  +GD+
Sbjct: 112 TKLIDSSEIEVDAEPKEENKKEIPEKLKNVKVDTENPSAEPYTKAKGDV 160

>MIA40_CANGA (Q6FW26) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 404

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 16/51 (31%), Positives = 19/51 (37%)
 Frame = +3

Query: 195 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIACMLR 347
           WD  C G    GP GE F   F  F+   + P     C+  F     C  R
Sbjct: 289 WDCPCLGGMAHGPCGEEFKAAFSCFVYSEAEPKGI-DCVEKFQHMQDCFRR 338

>MIA40_GIBZE (Q4IK03) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 391

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 16/48 (33%), Positives = 18/48 (37%)
 Frame = +3

Query: 195 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIAC 338
           WD  C G   +GP GE F   F  F+     P     CI  F     C
Sbjct: 150 WDCPCLGGMADGPCGEEFKTAFSCFVFSQEEPKG-MDCIDKFQGMQEC 196

>MIA40_YEAST (P36046) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 403

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 15/48 (31%), Positives = 18/48 (37%)
 Frame = +3

Query: 195 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIAC 338
           WD  C G    GP GE F   F  F+   + P     C+  F     C
Sbjct: 294 WDCPCLGGMAHGPCGEEFKSAFSCFVYSEAEPKGI-DCVEKFQHMQDC 340

>VGP_EBORS (Q89853) Structural glycoprotein precursor (Virion spike|
           glycoprotein) [Contains: GP1; GP2]
          Length = 677

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
 Frame = -1

Query: 652 TIAESAGLVSSEMSESGGLEPSK------SPEETNAETVPKKNELPIASANNPPAGPST- 494
           TIA S  + S   +     +P+       SP   + ET+      PI  +NN    P T 
Sbjct: 385 TIAPSPTMTSEVDNNVPSEQPNNTASIEDSPPSASNETIDHSEMNPIQGSNNSAQSPQTK 444

Query: 493 TVQGDMHRSGNQNPYWSERYDRLQTYLENCDRSSQEGYMRMLRTLSAAGRSMHAIELEKR 314
           T          Q+P  +    +L T   +    SQ G+   + T+S    S+     +KR
Sbjct: 445 TTPAPTASPMTQDPQETANSSKLGTSPGSAAEPSQPGF--TINTVSKVADSLSPTRKQKR 502

Query: 313 AI 308
           ++
Sbjct: 503 SV 504

>MIA40_USTMA (Q4P8D2) Intermembrane space import and assembly protein 40,|
           mitochondrial precursor (Mitochondrial import inner
           membrane translocase TIM40)
          Length = 247

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 15/48 (31%), Positives = 19/48 (39%)
 Frame = +3

Query: 195 WDDRCKGSCFEGPFGETFPKTFKAFIRCSSLPSSTRRCIALFSSSIAC 338
           WD  C G    GP GE F   F  F+   + P     C+  F +   C
Sbjct: 147 WDCPCLGGMAHGPCGEQFKLAFSCFVYSEAEPKGI-DCVDKFKAMQDC 193

>NCA12_XENLA (P36335) Neural cell adhesion molecule 1-B precursor|
          Length = 1092

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = -1

Query: 625  SSEMSESGGLEPSKSPEETNAETV---PKKNELPIASANNPPAGPSTTVQGDMHRSGNQN 455
            ++ ++ S    PS +P+    ++V   P K E+P AS+  P + P      D+  +   N
Sbjct: 844  TTTLTSSTAPPPSTAPDSNTVQSVQATPSKAEVPTASSPPPTSSPKVAPLVDLSDTPTNN 903

Query: 454  P 452
            P
Sbjct: 904  P 904

>CCL1_YEAST (P37366) Cyclin CCL1|
          Length = 393

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
 Frame = -1

Query: 586 KSPEETNAETVPKKNE---LPIASANNPPAGPSTTVQGDMHRSGNQNPYWSERYDRLQ-T 419
           KS  +T + T+  K +   L  A  NN P         D++R  +Q   WS   D+LQ  
Sbjct: 9   KSTLDTPSATMSAKEKEAKLKSADENNKPPNYKRISDDDLYRHSSQYRMWSYTKDQLQEK 68

Query: 418 YLENCDRSSQEGYMRMLRTLSAAGRSMHAIE-LEKRAIHLLVEEGKELQRMKALNV 254
            ++   R+       +L+   A   +   I+ LE +AI L +EE  +L    A  V
Sbjct: 69  RVDTNARAIAYIEENLLKFREAHNLTEEEIKVLEAKAIPLTMEEELDLVNFYAKKV 124

>HYUB_PSESN (Q01263) Hydantoin utilization protein B (ORF3)|
          Length = 592

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +2

Query: 155 IFGSTDIASTVSFLGRPLQRILLRRTVWRNFPQNIQSLHPLQL 283
           + G+ DIA  ++     L+ ILL  TV+ NFPQN   + P+++
Sbjct: 301 LLGTVDIAIYLT-----LRSILLDSTVYGNFPQNSGLIRPIKI 338

>Y229_PHOLL (Q7N9T4) UPF0241 protein plu0229|
          Length = 169

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = -1

Query: 607 SGGLEPSKSPEETNAETVPKKNELPIASANNPPAGPSTTVQGDMHRSGNQ 458
           S   +  K+ EE NAE   +K E       NPP   +    GD H SG Q
Sbjct: 13  SASKQKRKNREELNAEGRARKREKK--HRGNPPGNRNQEQSGDKHPSGKQ 60


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,671,144
Number of Sequences: 219361
Number of extensions: 1818242
Number of successful extensions: 5686
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5681
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6257125380
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)