ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal14d14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR... 603 e-169
2gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo... 507 e-141
3gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA 507 e-141
4gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form... 412 e-112
5gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5... 371 1e-99
6emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat... 321 9e-85
7gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR... 289 3e-75
8gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for... 198 9e-48
9gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome... 133 4e-28
10gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome... 133 4e-28
11gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb... 133 4e-28
12dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ... 133 4e-28
13dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 133 4e-28
14dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 4e-28
15dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 4e-28
16dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 4e-28
17dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 4e-28
18gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 133 4e-28
19dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s... 133 4e-28
20dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l... 133 4e-28
21gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplas... 121 2e-24
22dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 3e-23
23gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tet... 101 2e-18
24dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
25dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
26gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox... 76 9e-11
27gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox... 76 9e-11
28emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase 76 9e-11
29gb|AY110044.1| Zea mays CL1146_1 mRNA sequence 76 9e-11
30gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ... 74 3e-10
31gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ... 74 3e-10
32gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA... 74 3e-10
33gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca... 70 5e-09
34gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ... 68 2e-08
35gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ... 68 2e-08
36gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c... 62 1e-06
37gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec... 44 0.31
38gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, compl... 44 0.31
39gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre... 42 1.2
40ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smoot... 42 1.2
41emb|Y10657.1|CLRCAGENE C.littorale rca gene 42 1.2
42gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Synten... 40 4.8
43gb|U60105.1| Bos taurus large conductance calcium-activated pota... 40 4.8
44gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trx... 40 4.8
45gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, ... 40 4.8
46ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM001... 40 4.8
47gb|AF026000.2| Sus scrofa calcium-activated potassium channel al... 40 4.8
48gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, co... 40 4.8
49ref|NM_174680.2| Bos taurus potassium large conductance calcium-... 40 4.8
50gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 4.8
51gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Synten... 40 4.8
52gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRN... 40 4.8
53gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRN... 40 4.8
54gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRN... 40 4.8
55emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in ... 40 4.8
56gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, com... 40 4.8
57ref|NM_214219.1| Sus scrofa calcium-activated potassium channel ... 40 4.8
58gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, ... 40 4.8 
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score =  603 bits (304), Expect = e-169
 Identities = 352/361 (97%), Gaps = 6/361 (1%)
 Strand = Plus / Minus

                                                                        
Query: 6    gtaggtaaaacatcagnatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccg 65
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1623 gtaggtaaaacatcag-atattaaaagtggcatgcttaaaaggtgtaaaggcagctgccg 1565

                                                                        
Query: 66   t-cgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccgg 124
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 ttcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccgg 1505

                                                                        
Query: 125  ca-cgggcaaagtaccttgctgngctcctttacctcctcctatgcagcaagtagatggtg 183
            || ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 1504 catcgggcaaagtaccttgctgtgctcctttacctcctcctatgcagcaag-agatggtg 1446

                                                                        
Query: 184  ggtgt-gtatggagaattttctaaccgtagnaaggaaccagtcttcatcgcatcctggtt 242
            ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1445 ggtgttgtatggagaattttctaaccgtag-aaggaaccagtcttcatcgcatcctggtt 1387

                                                                        
Query: 243  agcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacatt 302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1386 agcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacatt 1327

                                                                        
Query: 303  gtcctgctcctggacnagcatgtgcccgtactntagcagcttctcgactgtcatctttgg 362
            ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1326 gtcctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttgg 1267

             
Query: 363  c 363
            |
Sbjct: 1266 c 1266
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>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  507 bits (256), Expect = e-141
 Identities = 332/353 (94%), Gaps = 4/353 (1%)
 Strand = Plus / Minus

                                                                       
Query: 11  taaaacatcagnatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtc 70
           ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 684 taaaacatcag-atattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgtc 627

                                                                       
Query: 71  gctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacggg 130
            ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || ||
Sbjct: 626 actcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacagg 567

                                                                       
Query: 131 caaagtaccttgctgngctcctttacctcctcctatgcagcaagtagatggtgggtgtgt 190
           ||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 566 caaagtaccttgctgtgcccctttacctcctcctatgcagcaag-agatggtgggtgtgt 508

                                                                       
Query: 191 atggagaattttctaaccgtagnaaggaaccagtcttcatcgcatcctggttagcatcac 250
           ||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 507 atggagaatgttctaaccgtag-aaggtaccagtcttcatcgcatcctggttagcatcac 449

                                                                       
Query: 251 ccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgct 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgct 389

                                                                
Query: 311 cctggacnagcatgtgcccgtactntagcagcttctcgactgtcatctttggc 363
           ||||||| |||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 388 cctggacgagcatgtgcccgtactctagcagcttctccactgtcatctttggc 336
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>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score =  507 bits (256), Expect = e-141
 Identities = 332/353 (94%), Gaps = 4/353 (1%)
 Strand = Plus / Minus

                                                                        
Query: 11   taaaacatcagnatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtc 70
            ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 1534 taaaacatcag-atattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgtc 1477

                                                                        
Query: 71   gctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacggg 130
             ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || ||
Sbjct: 1476 actcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacagg 1417

                                                                        
Query: 131  caaagtaccttgctgngctcctttacctcctcctatgcagcaagtagatggtgggtgtgt 190
            ||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1416 caaagtaccttgctgtgcccctttacctcctcctatgcagcaag-agatggtgggtgtgt 1358

                                                                        
Query: 191  atggagaattttctaaccgtagnaaggaaccagtcttcatcgcatcctggttagcatcac 250
            ||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 1357 atggagaatgttctaaccgtag-aaggtaccagtcttcatcgcatcctggttagcatcac 1299

                                                                        
Query: 251  ccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgct 310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1298 ccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgct 1239

                                                                 
Query: 311  cctggacnagcatgtgcccgtactntagcagcttctcgactgtcatctttggc 363
            ||||||| |||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 1238 cctggacgagcatgtgcccgtactctagcagcttctccactgtcatctttggc 1186
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>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  412 bits (208), Expect = e-112
 Identities = 314/347 (90%), Gaps = 4/347 (1%)
 Strand = Plus / Minus

                                                                        
Query: 13   aaacatcagnatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgc 72
            ||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1543 aaacatcagaataattaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgc 1484

                                                                        
Query: 73   tccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggca 132
            |||| || ||||||||| ||||||||||||   ||||||| |||||||||||||| ||||
Sbjct: 1483 tcctcgcggttgggtcgaagttcttggcatcccggtcggtacaaccttccggcacaggca 1424

                                                                        
Query: 133  aagtaccttgctgngctcctttacctcctcctatgcagcaagtagatggtgggtgtgtat 192
            |||| ||||| || |||||||||||||||||||||||||||| |||||||||  ||||||
Sbjct: 1423 aagtgccttgttgtgctcctttacctcctcctatgcagcaag-agatggtgg--gtgtat 1367

                                                                        
Query: 193  ggagaattttctaaccgtagnaaggaaccagtcttcatcgcatcctggttagcatcaccc 252
            | ||| | |||||||||||| ||||||||||||||||| ||||||| ||| |||||||||
Sbjct: 1366 gaagagtgttctaaccgtag-aaggaaccagtcttcatggcatccttgttcgcatcaccc 1308

                                                                        
Query: 253  agagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcc 312
            |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 1307 agagctgcctggctcatgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcc 1248

                                                           
Query: 313  tggacnagcatgtgcccgtactntagcagcttctcgactgtcatctt 359
            ||||| |||||||| |||||||  |||| |||||| || ||||||||
Sbjct: 1247 tggacaagcatgtggccgtactccagcaacttctccaccgtcatctt 1201
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>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  371 bits (187), Expect = 1e-99
 Identities = 205/209 (98%), Gaps = 2/209 (0%)
 Strand = Plus / Minus

                                                                        
Query: 155  acctcctcctatgcagcaagtagatggtgggtgtgtatggagaattttctaaccgtagna 214
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 7355 acctcctcctatgcagcaag-agatggtgggtgtgtatggagaattttctaaccgtag-a 7298

                                                                        
Query: 215  aggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtagg 274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7297 aggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtagg 7238

                                                                        
Query: 275  tgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagcatgtgcccgtact 334
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 7237 tgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtact 7178

                                         
Query: 335  ntagcagcttctcgactgtcatctttggc 363
             ||||||||||||||||||||||||||||
Sbjct: 7177 ctagcagcttctcgactgtcatctttggc 7149



 Score =  293 bits (148), Expect = 2e-76
 Identities = 157/159 (98%), Gaps = 1/159 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    cttaggtaggtaaaacatcagnatattaaaagtggcatgcttaaaaggtgtaaaggcagc 60
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 7680 cttaggtaggtaaaacatcag-atattaaaagtggcatgcttaaaaggtgtaaaggcagc 7622

                                                                        
Query: 61   tgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaacctt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7621 tgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaacctt 7562

                                                   
Query: 121  ccggcacgggcaaagtaccttgctgngctcctttacctc 159
            ||||||||||||||||||||||||| |||||||||||||
Sbjct: 7561 ccggcacgggcaaagtaccttgctgtgctcctttacctc 7523



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                
Query: 283  agctgcacacgcttgacattgtcctgctcctggacnagcatgtgcccgtact 334
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||
Sbjct: 3961 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtact 3910
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>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score =  321 bits (162), Expect = 9e-85
 Identities = 176/180 (97%), Gaps = 1/180 (0%)
 Strand = Plus / Minus

                                                                       
Query: 184 ggtgtgtatggagaattttctaaccgtagnaaggaaccagtcttcatcgcatcctggtta 243
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 308 ggtgtgtatggagaatgttctaaccgtag-aaggaaccagtcttcatcgcatcctggtta 250

                                                                       
Query: 244 gcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattg 190

                                                                       
Query: 304 tcctgctcctggacnagcatgtgcccgtactntagcagcttctcgactgtcatctttggc 363
           |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 189 tcctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggc 130
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>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score =  289 bits (146), Expect = 3e-75
 Identities = 155/157 (98%), Gaps = 1/157 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    cttaggtaggtaaaacatcagnatattaaaagtggcatgcttaaaaggtgtaaaggcagc 60
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1320 cttaggtaggtaaaacatcag-atattaaaagtggcatgcttaaaaggtgtaaaggcagc 1262

                                                                        
Query: 61   tgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaacctt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 tgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaacctt 1202

                                                 
Query: 121  ccggcacgggcaaagtaccttgctgngctcctttacc 157
            ||||||||||||||||||||||||| |||||||||||
Sbjct: 1201 ccggcacgggcaaagtaccttgctgtgctcctttacc 1165



 Score =  285 bits (144), Expect = 5e-74
 Identities = 148/150 (98%)
 Strand = Plus / Minus

                                                                        
Query: 214  aaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtag 273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1160 aaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtag 1101

                                                                        
Query: 274  gtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagcatgtgcccgtac 333
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1100 gtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtac 1041

                                          
Query: 334  tntagcagcttctcgactgtcatctttggc 363
            | ||||||||||||||||||||||||||||
Sbjct: 1040 tctagcagcttctcgactgtcatctttggc 1011
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>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  198 bits (100), Expect = 9e-48
 Identities = 134/146 (91%)
 Strand = Plus / Minus

                                                                        
Query: 214  aaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtag 273
            ||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||| 
Sbjct: 1356 aaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctggctcatgtaa 1297

                                                                        
Query: 274  gtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagcatgtgcccgtac 333
            ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 1296 gtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatgtggccgtac 1237

                                      
Query: 334  tntagcagcttctcgactgtcatctt 359
            |  |||| |||||| || ||||||||
Sbjct: 1236 tccagcaacttctccaccgtcatctt 1211



 Score =  174 bits (88), Expect = 1e-40
 Identities = 130/145 (89%)
 Strand = Plus / Minus

                                                                        
Query: 13   aaacatcagnatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgc 72
            ||||||||  ||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1505 aaacatcanaataattaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgc 1446

                                                                        
Query: 73   tccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggca 132
            |||| || ||||||||| ||||||||||||   ||||||| |||||||||||||| ||||
Sbjct: 1445 tcctcgcggttgggtcgaagttcttggcatcccggtcggtacaaccttccggcacaggca 1386

                                     
Query: 133  aagtaccttgctgngctcctttacc 157
            |||| ||||| || |||||||||||
Sbjct: 1385 aagtgccttgttgtgctcctttacc 1361
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>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  133 bits (67), Expect = 4e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                          
Query: 38     tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 97
              ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 107158 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 107217

                                                 
Query: 98     ggcattttggtcggtgcaaccttccggcacgggca 132
              ||||    |||||||||||||||||||||| ||||
Sbjct: 107218 ggcaacagggtcggtgcaaccttccggcacaggca 107252



 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 110/133 (82%), Gaps = 1/133 (0%)
 Strand = Plus / Plus

                                                                          
Query: 202    tctaaccgtagnaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcc 261
              ||||||||||| ||||||||||||||||| || ||   |||||| ||||| ||||| |||
Sbjct: 108306 tctaaccgtag-aaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcc 108364

                                                                          
Query: 262    tggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagc 321
              | ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||
Sbjct: 108365 tcgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagc 108424

                           
Query: 322    atgtgcccgtact 334
              ||||  |||||||
Sbjct: 108425 atgtatccgtact 108437



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                          
Query: 56     gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 115
              ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 112053 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 112112

                             
Query: 116    accttccggcacggg 130
               ||  ||||||||||
Sbjct: 112113 tcccgccggcacggg 112127
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>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  133 bits (67), Expect = 4e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                         
Query: 38    tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 97
             ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 29039 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 29098

                                                
Query: 98    ggcattttggtcggtgcaaccttccggcacgggca 132
             ||||    |||||||||||||||||||||| ||||
Sbjct: 29099 ggcaacagggtcggtgcaaccttccggcacaggca 29133



 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 110/133 (82%), Gaps = 1/133 (0%)
 Strand = Plus / Plus

                                                                         
Query: 202   tctaaccgtagnaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcc 261
             ||||||||||| ||||||||||||||||| || ||   |||||| ||||| ||||| |||
Sbjct: 30183 tctaaccgtag-aaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcc 30241

                                                                         
Query: 262   tggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagc 321
             | ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||
Sbjct: 30242 tcgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagc 30301

                          
Query: 322   atgtgcccgtact 334
             ||||  |||||||
Sbjct: 30302 atgtatccgtact 30314



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                         
Query: 56    gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 115
             ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 33930 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 33989

                            
Query: 116   accttccggcacggg 130
              ||  ||||||||||
Sbjct: 33990 tcccgccggcacggg 34004
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>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  133 bits (67), Expect = 4e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 38   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 97
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1520 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1461

                                               
Query: 98   ggcattttggtcggtgcaaccttccggcacgggca 132
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1460 ggcaacagggtcggtgcaaccttccggcacaggca 1426



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 107/130 (82%), Gaps = 1/130 (0%)
 Strand = Plus / Minus

                                                                        
Query: 205  aaccgtagnaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctgg 264
            |||||||| ||||||||||||||||| || ||   |||||| ||||| ||||| |||| |
Sbjct: 1316 aaccgtag-aaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcg 1258

                                                                        
Query: 265  ctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagcatg 324
            |||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||
Sbjct: 1257 ctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatg 1198

                      
Query: 325  tgcccgtact 334
            |  |||||||
Sbjct: 1197 tatccgtact 1188
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>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  133 bits (67), Expect = 4e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 38   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 97
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1430 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1371

                                               
Query: 98   ggcattttggtcggtgcaaccttccggcacgggca 132
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1370 ggcaacagggtcggtgcaaccttccggcacaggca 1336



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 99/121 (81%)
 Strand = Plus / Minus

                                                                        
Query: 214  aaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtag 273
            ||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||||| ||| 
Sbjct: 1303 aaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctcaagtac 1244

                                                                        
Query: 274  gtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagcatgtgcccgtac 333
               ||||| ||||||||||||||||| || ||||||||||  || |||||||  ||||||
Sbjct: 1243 tgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtatccgtac 1184

             
Query: 334  t 334
            |
Sbjct: 1183 t 1183
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  133 bits (67), Expect = 4e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                            
Query: 38       tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 97
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28302301 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28302360

                                                   
Query: 98       ggcattttggtcggtgcaaccttccggcacgggca 132
                ||||    |||||||||||||||||||||| ||||
Sbjct: 28302361 ggcaacagggtcggtgcaaccttccggcacaggca 28302395



 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 110/133 (82%), Gaps = 1/133 (0%)
 Strand = Plus / Plus

                                                                            
Query: 202      tctaaccgtagnaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcc 261
                ||||||||||| ||||||||||||||||| || ||   |||||| ||||| ||||| |||
Sbjct: 28303445 tctaaccgtag-aaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcc 28303503

                                                                            
Query: 262      tggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagc 321
                | ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||
Sbjct: 28303504 tcgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagc 28303563

                             
Query: 322      atgtgcccgtact 334
                ||||  |||||||
Sbjct: 28303564 atgtatccgtact 28303576



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 56       gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 115
                ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 28307192 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28307251

                               
Query: 116      accttccggcacggg 130
                 ||  ||||||||||
Sbjct: 28307252 tcccgccggcacggg 28307266
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>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  133 bits (67), Expect = 4e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 38   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 97
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1514 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1455

                                               
Query: 98   ggcattttggtcggtgcaaccttccggcacgggca 132
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1454 ggcaacagggtcggtgcaaccttccggcacaggca 1420



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 107/130 (82%), Gaps = 1/130 (0%)
 Strand = Plus / Minus

                                                                        
Query: 205  aaccgtagnaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctgg 264
            |||||||| ||||||||||||||||| || ||   |||||| ||||| ||||| |||| |
Sbjct: 1310 aaccgtag-aaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcg 1252

                                                                        
Query: 265  ctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagcatg 324
            |||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||
Sbjct: 1251 ctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatg 1192

                      
Query: 325  tgcccgtact 334
            |  |||||||
Sbjct: 1191 tatccgtact 1182
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>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  133 bits (67), Expect = 4e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 38   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 97
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1552 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1493

                                               
Query: 98   ggcattttggtcggtgcaaccttccggcacgggca 132
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1492 ggcaacagggtcggtgcaaccttccggcacaggca 1458



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 107/130 (82%), Gaps = 1/130 (0%)
 Strand = Plus / Minus

                                                                        
Query: 205  aaccgtagnaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctgg 264
            |||||||| ||||||||||||||||| || ||   |||||| ||||| ||||| |||| |
Sbjct: 1348 aaccgtag-aaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcg 1290

                                                                        
Query: 265  ctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagcatg 324
            |||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||
Sbjct: 1289 ctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatg 1230

                      
Query: 325  tgcccgtact 334
            |  |||||||
Sbjct: 1229 tatccgtact 1220
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>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  133 bits (67), Expect = 4e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 38   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 97
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1551 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1492

                                               
Query: 98   ggcattttggtcggtgcaaccttccggcacgggca 132
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1491 ggcaacagggtcggtgcaaccttccggcacaggca 1457



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 107/130 (82%), Gaps = 1/130 (0%)
 Strand = Plus / Minus

                                                                        
Query: 205  aaccgtagnaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctgg 264
            |||||||| ||||||||||||||||| || ||   |||||| ||||| ||||| |||| |
Sbjct: 1347 aaccgtag-aaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcg 1289

                                                                        
Query: 265  ctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagcatg 324
            |||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||
Sbjct: 1288 ctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatg 1229

                      
Query: 325  tgcccgtact 334
            |  |||||||
Sbjct: 1228 tatccgtact 1219
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>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
            insert sequence
          Length = 1470

 Score =  133 bits (67), Expect = 4e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 38   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 97
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1335 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1276

                                               
Query: 98   ggcattttggtcggtgcaaccttccggcacgggca 132
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1275 ggcaacagggtcggtgcaaccttccggcacaggca 1241



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 107/130 (82%), Gaps = 1/130 (0%)
 Strand = Plus / Minus

                                                                        
Query: 205  aaccgtagnaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctgg 264
            |||||||| ||||||||||||||||| || ||   |||||| ||||| ||||| |||| |
Sbjct: 1131 aaccgtag-aaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcg 1073

                                                                        
Query: 265  ctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagcatg 324
            |||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||
Sbjct: 1072 ctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatg 1013

                      
Query: 325  tgcccgtact 334
            |  |||||||
Sbjct: 1012 tatccgtact 1003
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  133 bits (67), Expect = 4e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                            
Query: 38       tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 97
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28284750 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28284809

                                                   
Query: 98       ggcattttggtcggtgcaaccttccggcacgggca 132
                ||||    |||||||||||||||||||||| ||||
Sbjct: 28284810 ggcaacagggtcggtgcaaccttccggcacaggca 28284844



 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 110/133 (82%), Gaps = 1/133 (0%)
 Strand = Plus / Plus

                                                                            
Query: 202      tctaaccgtagnaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcc 261
                ||||||||||| ||||||||||||||||| || ||   |||||| ||||| ||||| |||
Sbjct: 28285894 tctaaccgtag-aaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcc 28285952

                                                                            
Query: 262      tggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagc 321
                | ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||
Sbjct: 28285953 tcgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagc 28286012

                             
Query: 322      atgtgcccgtact 334
                ||||  |||||||
Sbjct: 28286013 atgtatccgtact 28286025



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 56       gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 115
                ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 28289641 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28289700

                               
Query: 116      accttccggcacggg 130
                 ||  ||||||||||
Sbjct: 28289701 tcccgccggcacggg 28289715
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>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  133 bits (67), Expect = 4e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 38   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 97
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1556 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1497

                                               
Query: 98   ggcattttggtcggtgcaaccttccggcacgggca 132
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1496 ggcaacagggtcggtgcaaccttccggcacaggca 1462



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 107/130 (82%), Gaps = 1/130 (0%)
 Strand = Plus / Minus

                                                                        
Query: 205  aaccgtagnaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctgg 264
            |||||||| ||||||||||||||||| || ||   |||||| ||||| ||||| |||| |
Sbjct: 1352 aaccgtag-aaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcg 1294

                                                                        
Query: 265  ctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagcatg 324
            |||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||
Sbjct: 1293 ctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatg 1234

                      
Query: 325  tgcccgtact 334
            |  |||||||
Sbjct: 1233 tatccgtact 1224
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>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  133 bits (67), Expect = 4e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 38   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 97
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1465 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1406

                                               
Query: 98   ggcattttggtcggtgcaaccttccggcacgggca 132
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1405 ggcaacagggtcggtgcaaccttccggcacaggca 1371



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 99/121 (81%)
 Strand = Plus / Minus

                                                                        
Query: 214  aaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtag 273
            ||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||||| ||| 
Sbjct: 1338 aaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctcaagtac 1279

                                                                        
Query: 274  gtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagcatgtgcccgtac 333
               ||||| ||||||||||||||||| || ||||||||||  || |||||||  ||||||
Sbjct: 1278 tgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtatccgtac 1219

             
Query: 334  t 334
            |
Sbjct: 1218 t 1218
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>gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplast RuBisCO small
           isoform precursor, mRNA, partial cds; nuclear gene for
           chloroplast product
          Length = 93

 Score =  121 bits (61), Expect = 2e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                       
Query: 44  aaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcatt 103
           ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||  
Sbjct: 93  aaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttcttggcaac 34

                                        
Query: 104 ttggtcggtgcaaccttccggcacgggca 132
             |||||||||||||||||||||| ||||
Sbjct: 33  agggtcggtgcaaccttccggcacaggca 5
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>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  117 bits (59), Expect = 3e-23
 Identities = 87/95 (91%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                        
Query: 38   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 97
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 1562 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcg-aattctt 1504

                                               
Query: 98   ggcattttggtcggtgcaaccttccggcacgggca 132
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1503 ggcaacagggtcggtgcaaccttccggcacaggca 1469



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 107/130 (82%), Gaps = 1/130 (0%)
 Strand = Plus / Minus

                                                                        
Query: 205  aaccgtagnaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctgg 264
            |||||||| ||||||||||||||||| || ||   |||||| ||||| ||||| |||| |
Sbjct: 1359 aaccgtag-aaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcg 1301

                                                                        
Query: 265  ctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagcatg 324
            |||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||
Sbjct: 1300 ctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatg 1241

                      
Query: 325  tgcccgtact 334
            |  |||||||
Sbjct: 1240 tatccgtact 1231
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>gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tetep genomic
           sequence
          Length = 234

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                       
Query: 38  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 97
           |||||||||| | |||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 135 tgcttaaaagttttaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 76

                                              
Query: 98  ggcattttggtcggtgcaaccttccggcacgggca 132
           ||||    ||||||  |||||||||||||| ||||
Sbjct: 75  ggcaacagggtcgggtcaaccttccggcacaggca 41
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                           
Query: 38      tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 97
               |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 4541413 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 4541354

                                                  
Query: 98      ggcattttggtcggtgcaaccttccggcacgggca 132
               ||||    |||||||||||||||||||||| ||||
Sbjct: 4541353 ggcaacagggtcggtgcaaccttccggcacaggca 4541319
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>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0638A12
          Length = 140731

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                         
Query: 38    tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 97
             |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 84787 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 84728

                                                
Query: 98    ggcattttggtcggtgcaaccttccggcacgggca 132
             ||||    |||||||||||||||||||||| ||||
Sbjct: 84727 ggcaacagggtcggtgcaaccttccggcacaggca 84693
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>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 100/121 (82%)
 Strand = Plus / Minus

                                                                       
Query: 214 aaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtag 273
           ||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||| 
Sbjct: 917 aaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggtac 858

                                                                       
Query: 274 gtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagcatgtgcccgtac 333
            ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||||
Sbjct: 857 ttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgtac 798

            
Query: 334 t 334
           |
Sbjct: 797 t 797
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>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 100/121 (82%)
 Strand = Plus / Minus

                                                                        
Query: 214  aaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtag 273
            ||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||| 
Sbjct: 1312 aaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggtac 1253

                                                                        
Query: 274  gtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagcatgtgcccgtac 333
             ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||||
Sbjct: 1252 ttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgtac 1193

             
Query: 334  t 334
            |
Sbjct: 1192 t 1192
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>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase
          Length = 2472

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 96/116 (82%)
 Strand = Plus / Minus

                                                                       
Query: 229 atcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgc 288
           |||| ||||| ||| ||||| || |||||||| ||||||| ||| ||||| || || || 
Sbjct: 118 atcgaatcctcgtttgcatctccaagagctgcttggctcaagtacgtgtctgccagttga 59

                                                                   
Query: 289 acacgcttgacattgtcctgctcctggacnagcatgtgcccgtactntagcagctt 344
           || | ||| |||||||||||||||||||| |||||||  || |||| |||||||||
Sbjct: 58  actctcttcacattgtcctgctcctggacaagcatgtttccatactctagcagctt 3
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>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 100/121 (82%)
 Strand = Plus / Minus

                                                                        
Query: 214  aaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtag 273
            ||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||| 
Sbjct: 1312 aaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggtac 1253

                                                                        
Query: 274  gtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagcatgtgcccgtac 333
             ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||||
Sbjct: 1252 ttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgtac 1193

             
Query: 334  t 334
            |
Sbjct: 1192 t 1192
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>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 107/131 (81%)
 Strand = Plus / Minus

                                                                       
Query: 214 aaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtag 273
           ||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| ||| 
Sbjct: 997 aaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcaggtac 938

                                                                       
Query: 274 gtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagcatgtgcccgtac 333
            |||| || |||||||| | ||| || || ||||||||||| || |||||||  ||||||
Sbjct: 937 ttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcatgttgccgtac 878

                      
Query: 334 tntagcagctt 344
           |  ||||||||
Sbjct: 877 tccagcagctt 867



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 48   gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 107
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1149 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1090

                          
Query: 108  tcggtgcaaccttc 121
            ||||| ||||||||
Sbjct: 1089 tcggtacaaccttc 1076
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>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 107/131 (81%)
 Strand = Plus / Minus

                                                                        
Query: 214  aaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtag 273
            ||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| ||| 
Sbjct: 1191 aaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcaggtac 1132

                                                                        
Query: 274  gtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagcatgtgcccgtac 333
             |||| || |||||||| | ||| || || ||||||||||| || |||||||  ||||||
Sbjct: 1131 ttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcatgttgccgtac 1072

                       
Query: 334  tntagcagctt 344
            |  ||||||||
Sbjct: 1071 tccagcagctt 1061



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 48   gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 107
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1305 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1246

                          
Query: 108  tcggtgcaaccttc 121
            ||||| ||||||||
Sbjct: 1245 tcggtacaaccttc 1232
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>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                
Query: 283  agctgcacacgcttgacattgtcctgctcctggacnagcatgtgcccgtact 334
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||
Sbjct: 1392 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtact 1341
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>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 107/130 (82%), Gaps = 1/130 (0%)
 Strand = Plus / Minus

                                                                       
Query: 205 aaccgtagnaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctgg 264
           |||||||| ||||||||||||||||| || ||   |||||| ||||| ||||| |||| |
Sbjct: 565 aaccgtag-aaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcg 507

                                                                       
Query: 265 ctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacnagcatg 324
           |||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||
Sbjct: 506 ctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatg 447

                     
Query: 325 tgcccgtact 334
           |  |||||||
Sbjct: 446 tatccgtact 437
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>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 48   gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 107
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1450 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1391

                          
Query: 108  tcggtgcaaccttc 121
            ||||| ||||||||
Sbjct: 1390 tcggtacaaccttc 1377
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>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 48   gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 107
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1275 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1216

                          
Query: 108  tcggtgcaaccttc 121
            ||||| ||||||||
Sbjct: 1215 tcggtacaaccttc 1202
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>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                        
Query: 283  agctgcacacgcttgacattgtcctgctcctggacnagcatgtgcccgtactntagcagc 342
            |||||||| ||||| || || |||||||||||||| |||||||| |||||||  |  |||
Sbjct: 1242 agctgcacgcgcttcacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1183

                             
Query: 343  ttctcgactgtcatctt 359
            |||||||  ||||||||
Sbjct: 1182 ttctcgatggtcatctt 1166
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>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 232  gcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagc 281
            |||||||||||||||||||| || || ||||  ||||||||  |||||||
Sbjct: 1355 gcatcctggttagcatcaccaagggcagcctcactcatgtacttgtcagc 1306
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>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence
          Length = 119249

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 245   catcacccagagctgcctggct 266
             ||||||||||||||||||||||
Sbjct: 51275 catcacccagagctgcctggct 51254
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>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 68/84 (80%)
 Strand = Plus / Minus

                                                                        
Query: 241  ttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgaca 300
            ||||||||||| ||||| |||| |  ||||||  ||||||| |  || || | |||||| 
Sbjct: 1346 ttagcatcaccaagagcagcctcggacatgtatttgtcagctaattgaactctcttgacg 1287

                                    
Query: 301  ttgtcctgctcctggacnagcatg 324
            || |||||||||||||| ||||||
Sbjct: 1286 ttctcctgctcctggacaagcatg 1263
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>ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smooth muscle)
           (predicted) (Lmod1_predicted), mRNA
          Length = 1920

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 139 cttgctgngctcctttacctcctc 162
           ||||||| ||||||||||||||||
Sbjct: 648 cttgctgggctcctttacctcctc 625
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>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 283  agctgcacacgcttgacattgtcctgctc 311
            |||||||| ||||||||||| ||||||||
Sbjct: 2133 agctgcacgcgcttgacattctcctgctc 2105
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>gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 262062

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   cctttacctcctcctatgca 169
             ||||||||||||||||||||
Sbjct: 46359 cctttacctcctcctatgca 46378
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>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel
            alpha subunit mRNA, partial cds
          Length = 3448

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 245  catcacccagagctgcctggctca 268
            |||| |||||||||||||||||||
Sbjct: 1542 catcgcccagagctgcctggctca 1565
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>gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trxr2) gene, exons 12 through 18,
            and complete cds
          Length = 16432

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 150  cctttacctcctcctatgca 169
            ||||||||||||||||||||
Sbjct: 1637 cctttacctcctcctatgca 1656
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>gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, complete sequence
          Length = 202128

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   cctttacctcctcctatgca 169
             ||||||||||||||||||||
Sbjct: 32945 cctttacctcctcctatgca 32964
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>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA
          Length = 531

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 276 gtcagcaagctgcacacgct 295
           ||||||||||||||||||||
Sbjct: 242 gtcagcaagctgcacacgct 223
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>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA,
            complete cds
          Length = 3459

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 245  catcacccagagctgcctggctca 268
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619
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>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence
          Length = 161308

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 295    ttgacattgtcctgctcctg 314
              ||||||||||||||||||||
Sbjct: 126438 ttgacattgtcctgctcctg 126419
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>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel,
            subfamily M, alpha member 1 (KCNMA1), mRNA
          Length = 6183

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 245  catcacccagagctgcctggctca 268
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935
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>gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306,  section 128 of 469 of the
            complete genome
          Length = 11388

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 47   ggtgtaaaggcagctgccgtcgtcgctc 74
            |||||| |||| ||||||||||||||||
Sbjct: 5160 ggtgtacaggctgctgccgtcgtcgctc 5133
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>gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 176974

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   cctttacctcctcctatgca 169
             ||||||||||||||||||||
Sbjct: 34662 cctttacctcctcctatgca 34681
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>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds,
            alternatively spliced
          Length = 3430

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 245  catcacccagagctgcctggctca 268
            |||| |||||||||||||||||||
Sbjct: 1636 catcgcccagagctgcctggctca 1659
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>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds,
            alternatively spliced
          Length = 4490

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 245  catcacccagagctgcctggctca 268
            |||| |||||||||||||||||||
Sbjct: 2003 catcgcccagagctgcctggctca 2026
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>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds,
            alternatively spliced
          Length = 6183

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 245  catcacccagagctgcctggctca 268
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935
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>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15,
             complete sequence
          Length = 134752

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    tggcatgcttaaaaggtgta 52
             ||||||||||||||||||||
Sbjct: 78235 tggcatgcttaaaaggtgta 78254
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>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence
          Length = 125424

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    ttgacattgtcctgctcctg 314
              ||||||||||||||||||||
Sbjct: 106960 ttgacattgtcctgctcctg 106979
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>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit
            (KCNMA1), mRNA
          Length = 3459

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 245  catcacccagagctgcctggctca 268
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619
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>gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, complete sequence
          Length = 158595

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   cctttacctcctcctatgca 169
             ||||||||||||||||||||
Sbjct: 27755 cctttacctcctcctatgca 27736


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,302,619
Number of Sequences: 3902068
Number of extensions: 2302619
Number of successful extensions: 38640
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38463
Number of HSP's gapped (non-prelim): 126
length of query: 363
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 341
effective length of database: 17,147,199,772
effective search space: 5847195122252
effective search space used: 5847195122252
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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