ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal13o14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MAGD4_HUMAN (Q96JG8) Melanoma-associated antigen D4 (MAGE-D4 ant... 30 3.1
2SON_MOUSE (Q9QX47) SON protein 29 9.1

>MAGD4_HUMAN (Q96JG8) Melanoma-associated antigen D4 (MAGE-D4 antigen) (MAGE-E1|
           antigen)
          Length = 741

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -3

Query: 431 EGAD-VESEEMMEEDQTSPAGAAYNYNTFESFMLHLWHFLQLIVGRMKPRVTRLPSTPW 258
           EG+D V  EEM+E +     GA   Y T  SF +H+        G + P +  L + PW
Sbjct: 20  EGSDEVGEEEMVEGNDYEEFGAFGGYGTLTSFDIHILR----AFGSLGPGLRILSNEPW 74



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>SON_MOUSE (Q9QX47) SON protein|
          Length = 2404

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 131 IPGPPAAVAPRMPGWPQSPSRTRNRWLP 214
           +PGPPA V P +PG   +P    ++ LP
Sbjct: 422 LPGPPATVVPELPGPSVTPVPQLSQELP 449


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,805,045
Number of Sequences: 219361
Number of extensions: 1289336
Number of successful extensions: 4380
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4372
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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