ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal14d13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ167203.2| Triticum aestivum eukaryotic translation initiati... 394 e-107
2gb|DQ234393.1| Aegilops tauschii translation initiation factor 5... 276 3e-71
3gb|DQ167202.1| Triticum aestivum eukaryotic translation initiati... 276 3e-71
4gb|DQ167201.1| Triticum aestivum eukaryotic translation initiati... 276 3e-71
5gb|DQ234392.1| Thinopyrum intermedium translation initiation fac... 268 7e-69
6gb|DQ234391.1| Secale cereale translation initiation factor 5A m... 268 7e-69
7gb|DQ234394.1| Secale sylvestre translation initiation factor 5A... 260 2e-66
8gb|DQ234390.1| Dasypyrum breviaristatum translation initiation f... 254 1e-64
9gb|DQ414518.1| Dasypyrum breviaristatum eukaryotic translation i... 66 5e-08
10gb|DQ279900.1| Haynaldia villosa translation initiation factor g... 66 5e-08
11gb|DQ279899.1| Crithopsis delileana translation initiation facto... 66 5e-08
12gb|AF296086.1|AF296086 Lycopersicon esculentum eukaryotic transl... 62 8e-07
13dbj|AB004827.1| Solanum tuberosum mRNA for eukaryotic initiation... 62 8e-07
14dbj|AB004823.1| Solanum tuberosum mRNA for eukaryotic initiation... 60 3e-06
15gb|DQ279898.1| Psathyrostachys juncea translation initiation fac... 58 1e-05
16gb|DQ279894.1| Lophopyrum elongatum translation initiation facto... 58 1e-05
17gb|AY484392.1| Capsicum annuum eukaryotic initiation factor 5A2 ... 54 2e-04
18gb|AY484391.1| Capsicum annuum mary storys protein mRNA, complet... 54 2e-04
19gb|DQ279897.1| Secale cereale translation initiation factor gene... 54 2e-04
20ref|XM_469841.1| Oryza sativa (japonica cultivar-group), mRNA 52 8e-04
21gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 52 8e-04
22gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosom... 52 8e-04
23emb|AJ312906.1|OSA312906 Oryza sativa mRNA for translation initi... 52 8e-04
24emb|AJ252135.1|OSA252135 Oryza sativa mRNA for translation initi... 52 8e-04
25gb|DQ083198.1| Oryza sativa (indica cultivar-group) clone 5S10E1... 52 8e-04
26gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genom... 52 8e-04
27dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 52 8e-04
28dbj|AK121592.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 8e-04
29dbj|AK060387.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 8e-04
30gb|DQ279896.1| Aegilops tauschii translation initiation factor g... 50 0.003
31gb|DQ279895.1| Eremopyrum bonaepartis translation initiation fac... 50 0.003
32gb|DQ279893.1| Pseudoroegneria spicata translation initiation fa... 50 0.003
33ref|NM_194115.2| Oryza sativa (japonica cultivar-group), mRNA 48 0.012
34dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.012
35dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic D... 48 0.012
36dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.012
37dbj|AK058206.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.012
38ref|NM_102425.2| Arabidopsis thaliana translation initiation fac... 44 0.19
39ref|NM_102426.3| Arabidopsis thaliana unknown protein AT1G26640 ... 44 0.19
40ref|XM_608522.2| PREDICTED: Bos taurus similar to SH2 domain pro... 44 0.19
41gb|AY496435.1| Brassica napus eukaryotic translation initiation ... 44 0.19
42gb|AF492850.1| Arabidopsis thaliana putative initiation factor 5... 44 0.19
43gb|AY055789.1| Arabidopsis thaliana At1g26630/T24P13_1 mRNA, com... 44 0.19
44gb|AY039588.1| Arabidopsis thaliana At1g26630/T24P13_1 mRNA, com... 44 0.19
45emb|BX814371.1|CNS0ABYU Arabidopsis thaliana Full-length cDNA Co... 44 0.19
46gb|AY084827.1| Arabidopsis thaliana clone 118823 mRNA, complete ... 44 0.19
47gb|AC006535.7|AC006535 Genomic sequence for Arabidopsis thaliana... 44 0.19
48gb|AC182748.2| Mus musculus BAC clone RP23-348N13 from chromosom... 42 0.76
49gb|AC154443.2| Mus musculus BAC clone RP24-178N23 from chromosom... 42 0.76
50gb|AC104241.7| Homo sapiens chromosome 11, clone RP11-45A12, com... 40 3.0
51gb|AC123867.4| Mus musculus BAC clone RP23-127O13 from chromosom... 40 3.0
52gb|AC087880.24| Homo sapiens 12q BAC RP11-121J20 (Roswell Park C... 40 3.0
53gb|AC151836.3| Mus musculus BAC clone RP23-359F5 from chromosome... 40 3.0
54gb|AC092733.18| Homo sapiens chromosome 11, clone RP11-193F22, c... 40 3.0
55gb|AC087892.16| Homo sapiens 12q BAC RP11-3L23 (Roswell Park Can... 40 3.0
56emb|BX842561.12| Mouse DNA sequence from clone RP23-440P8 on chr... 40 3.0
57ref|XM_318419.2| Anopheles gambiae str. PEST ENSANGP00000002762 ... 40 3.0
58emb|AL671872.10| Mouse DNA sequence from clone RP23-151N17 on ch... 40 3.0 
>gb|DQ167203.2| Triticum aestivum eukaryotic translation initiation factor 5A3
           mRNA, complete cds
          Length = 768

 Score =  394 bits (199), Expect = e-107
 Identities = 225/233 (96%), Gaps = 1/233 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtactagcagcacctcgngcattcggtgtaaaaaacacacaaatctggatcaaacttgt 60
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 agtactagcagcacctcgagcattcggtgtaaaaaacacacaaatctggatcaaacttgt 681

                                                                       
Query: 61  ttcacccaacagatatcttgatgcctatgtatgtgtatctcaaacacccagaagcactag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttcacccaacagatatcttgatgcctatgtatgtgtatctcaaacacccagaagcactag 621

                                                                       
Query: 121 ntaccaagtatcacagctaggcaaccatgcaccgctgcttacttgccaccaccgatttcc 180
            ||||||||||| ||| |||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 620 ataccaagtatcgcaggtaggcaaccacgcacagctgcttacttgccaccaccgatttcc 561

                                                                
Query: 181 ttcacagcgcagatctgttctntcacccatggcagacatcacagacaggatca 233
           ||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 560 ttcacagcgcagatctgttct-tcacccatggcggacatcacagacaggatca 509
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>gb|DQ234393.1| Aegilops tauschii translation initiation factor 5A gene, complete
           cds
          Length = 636

 Score =  276 bits (139), Expect = 3e-71
 Identities = 163/170 (95%), Gaps = 1/170 (0%)
 Strand = Plus / Minus

                                                                       
Query: 64  acccaacagatatcttgatgcctatgtatgtgtatctcaaacacccagaagcactagnta 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 636 acccaacagatatcttgatgcctatgtatgtgtatctcaaacacccagaagcactagata 577

                                                                       
Query: 124 ccaagtatcacagctaggcaaccatgcaccgctgcttacttgccaccaccgatttccttc 183
           ||||||||| ||| |||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 576 ccaagtatcgcaggtaggcaaccacgcacagctgcttacttgccaccaccgatttccttc 517

                                                             
Query: 184 acagcgcagatctgttctntcacccatggcagacatcacagacaggatca 233
           |||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 516 acagcgcagatctgttct-tcacccatggcggacatcacagacaggatca 468
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>gb|DQ167202.1| Triticum aestivum eukaryotic translation initiation factor 5A2 gene,
            complete cds
          Length = 1679

 Score =  276 bits (139), Expect = 3e-71
 Identities = 163/170 (95%), Gaps = 1/170 (0%)
 Strand = Plus / Minus

                                                                        
Query: 64   acccaacagatatcttgatgcctatgtatgtgtatctcaaacacccagaagcactagnta 123
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1679 acccaacagatatcttgatgcctatgtatgtgtatctcaaacacccagaagcactagata 1620

                                                                        
Query: 124  ccaagtatcacagctaggcaaccatgcaccgctgcttacttgccaccaccgatttccttc 183
            ||||||||| ||| |||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 1619 ccaagtatcgcaggtaggcaaccacgcacagctgcttacttgccaccaccgatttccttc 1560

                                                              
Query: 184  acagcgcagatctgttctntcacccatggcagacatcacagacaggatca 233
            |||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 1559 acagcgcagatctgttct-tcacccatggcggacatcacagacaggatca 1511
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>gb|DQ167201.1| Triticum aestivum eukaryotic translation initiation factor 5A1 gene,
            complete cds
          Length = 1910

 Score =  276 bits (139), Expect = 3e-71
 Identities = 163/170 (95%), Gaps = 1/170 (0%)
 Strand = Plus / Minus

                                                                        
Query: 64   acccaacagatatcttgatgcctatgtatgtgtatctcaaacacccagaagcactagnta 123
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1910 acccaacagatatcttgatgcctatgtatgtgtatctcaaacacccagaagcactagata 1851

                                                                        
Query: 124  ccaagtatcacagctaggcaaccatgcaccgctgcttacttgccaccaccgatttccttc 183
            ||||||||| ||| |||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 1850 ccaagtatcgcaggtaggcaaccacgcacagctgcttacttgccaccaccgatttccttc 1791

                                                              
Query: 184  acagcgcagatctgttctntcacccatggcagacatcacagacaggatca 233
            |||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 1790 acagcgcagatctgttct-tcacccatggcggacatcacagacaggatca 1742
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>gb|DQ234392.1| Thinopyrum intermedium translation initiation factor 5A mRNA,
           complete cds
          Length = 636

 Score =  268 bits (135), Expect = 7e-69
 Identities = 162/170 (95%), Gaps = 1/170 (0%)
 Strand = Plus / Minus

                                                                       
Query: 64  acccaacagatatcttgatgcctatgtatgtgtatctcaaacacccagaagcactagnta 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 636 acccaacagatatcttgatgcctatgtatgtgtatctcaaacacccagaagcactagata 577

                                                                       
Query: 124 ccaagtatcacagctaggcaaccatgcaccgctgcttacttgccaccaccgatttccttc 183
           ||||||| | |||||||||||||| |||| |||||||||||||||||||||| |||||||
Sbjct: 576 ccaagtaccgcagctaggcaaccacgcacagctgcttacttgccaccaccgacttccttc 517

                                                             
Query: 184 acagcgcagatctgttctntcacccatggcagacatcacagacaggatca 233
           |||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 516 acagcgcagatctgttct-tcacccatggcggacatcacagacaggatca 468
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>gb|DQ234391.1| Secale cereale translation initiation factor 5A mRNA, complete cds
          Length = 636

 Score =  268 bits (135), Expect = 7e-69
 Identities = 162/170 (95%), Gaps = 1/170 (0%)
 Strand = Plus / Minus

                                                                       
Query: 64  acccaacagatatcttgatgcctatgtatgtgtatctcaaacacccagaagcactagnta 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 636 acccaacagatatcttgatgcctatgtatgtgtatctcaaacacccagaagcactagata 577

                                                                       
Query: 124 ccaagtatcacagctaggcaaccatgcaccgctgcttacttgccaccaccgatttccttc 183
           ||||||||| ||| |||||||||  |||| ||||||||||||||||||||||||||||||
Sbjct: 576 ccaagtatcgcaggtaggcaaccgcgcacagctgcttacttgccaccaccgatttccttc 517

                                                             
Query: 184 acagcgcagatctgttctntcacccatggcagacatcacagacaggatca 233
           |||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 516 acagcgcagatctgttct-tcacccatggcggacatcacagacaggatca 468
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>gb|DQ234394.1| Secale sylvestre translation initiation factor 5A mRNA, complete
           cds
          Length = 636

 Score =  260 bits (131), Expect = 2e-66
 Identities = 161/170 (94%), Gaps = 1/170 (0%)
 Strand = Plus / Minus

                                                                       
Query: 64  acccaacagatatcttgatgcctatgtatgtgtatctcaaacacccagaagcactagnta 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 636 acccaacagatatcttgatgcctatgtatgtgtatctcaaacacccagaagcactagata 577

                                                                       
Query: 124 ccaagtatcacagctaggcaaccatgcaccgctgcttacttgccaccaccgatttccttc 183
           ||||||||| ||| |||||||||  |||| ||||||||||||||||||||||||||||| 
Sbjct: 576 ccaagtatcgcaggtaggcaaccgcgcacagctgcttacttgccaccaccgatttcctta 517

                                                             
Query: 184 acagcgcagatctgttctntcacccatggcagacatcacagacaggatca 233
           |||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 516 acagcgcagatctgttct-tcacccatggcggacatcacagacaggatca 468
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>gb|DQ234390.1| Dasypyrum breviaristatum translation initiation factor 5A mRNA,
           complete cds
          Length = 637

 Score =  254 bits (128), Expect = 1e-64
 Identities = 162/171 (94%), Gaps = 2/171 (1%)
 Strand = Plus / Minus

                                                                       
Query: 64  acccaacagatatcttgatgcctatgtat-gtgtatctcaaacacccagaagcactagnt 122
           ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 637 acccaacagatatcttgatgcctatgtattgtgtatctcaaacacccagaagcactagat 578

                                                                       
Query: 123 accaagtatcacagctaggcaaccatgcaccgctgcttacttgccaccaccgatttcctt 182
           |||||||||| ||| |||||||||| || | |||||||||||||||||||| ||||||||
Sbjct: 577 accaagtatcgcagataggcaaccacgcgcagctgcttacttgccaccaccaatttcctt 518

                                                              
Query: 183 cacagcgcagatctgttctntcacccatggcagacatcacagacaggatca 233
           ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 517 cacagcgcagatctgttct-tcacccatggcagacatcacagacaggatca 468
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>gb|DQ414518.1| Dasypyrum breviaristatum eukaryotic translation initiation factor
            eIF5A gene, partial cds
          Length = 1344

 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 40/41 (97%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                     
Query: 193  atctgttctntcacccatggcagacatcacagacaggatca 233
            ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1344 atctgttct-tcacccatggcagacatcacagacaggatca 1305
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>gb|DQ279900.1| Haynaldia villosa translation initiation factor gene, partial cds
          Length = 1338

 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 40/41 (97%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                     
Query: 193  atctgttctntcacccatggcagacatcacagacaggatca 233
            ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1338 atctgttct-tcacccatggcagacatcacagacaggatca 1299
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>gb|DQ279899.1| Crithopsis delileana translation initiation factor gene, partial cds
          Length = 1494

 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 40/41 (97%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                     
Query: 193  atctgttctntcacccatggcagacatcacagacaggatca 233
            ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1494 atctgttct-tcacccatggcagacatcacagacaggatca 1455
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>gb|AF296086.1|AF296086 Lycopersicon esculentum eukaryotic translation initiation factor
           5A-4 mRNA, complete cds
          Length = 760

 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                              
Query: 178 tccttcacagcgcagatctgttctntcacccatggcagacatcacagacag 228
           ||||||||||| |||||||| ||| |||||||| |||||||||||||||||
Sbjct: 518 tccttcacagcacagatctgctct-tcacccattgcagacatcacagacag 469
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>dbj|AB004827.1| Solanum tuberosum mRNA for eukaryotic initiation factor 5A1,
           complete cds
          Length = 632

 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 47/51 (92%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                              
Query: 178 tccttcacagcgcagatctgttctntcacccatggcagacatcacagacag 228
           ||||||||||| |||||||| ||| |||||||| |||||||||||||||||
Sbjct: 506 tccttcacagcacagatctgctct-tcacccattgcagacatcacagacag 457
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>dbj|AB004823.1| Solanum tuberosum mRNA for eukaryotic initiation factor 5A2,
           complete cds
          Length = 716

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 46/50 (92%), Gaps = 1/50 (2%)
 Strand = Plus / Minus

                                                             
Query: 178 tccttcacagcgcagatctgttctntcacccatggcagacatcacagaca 227
           ||||||||||| |||||||| ||| |||||||| ||||||||||||||||
Sbjct: 520 tccttcacagcacagatctgctct-tcacccattgcagacatcacagaca 472
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>gb|DQ279898.1| Psathyrostachys juncea translation initiation factor gene, partial
            cds
          Length = 1375

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 39/41 (95%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                     
Query: 193  atctgttctntcacccatggcagacatcacagacaggatca 233
            ||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 1375 atctgttct-tcacccatggcggacatcacagacaggatca 1336
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>gb|DQ279894.1| Lophopyrum elongatum translation initiation factor gene, partial cds
          Length = 1334

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 39/41 (95%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                     
Query: 193  atctgttctntcacccatggcagacatcacagacaggatca 233
            ||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 1334 atctgttct-tcacccatggcggacatcacagacaggatca 1295
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>gb|AY484392.1| Capsicum annuum eukaryotic initiation factor 5A2 (eIF5A2) mRNA,
           complete cds
          Length = 718

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 46/51 (90%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                              
Query: 178 tccttcacagcgcagatctgttctntcacccatggcagacatcacagacag 228
           ||||||||||| || ||||||||| |||||||| ||||||||||| |||||
Sbjct: 493 tccttcacagcacaaatctgttct-tcacccattgcagacatcaccgacag 444
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>gb|AY484391.1| Capsicum annuum mary storys protein mRNA, complete cds
          Length = 718

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 46/51 (90%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                              
Query: 178 tccttcacagcgcagatctgttctntcacccatggcagacatcacagacag 228
           ||||||||||| || ||||||||| |||||||| ||||||||||| |||||
Sbjct: 493 tccttcacagcacaaatctgttct-tcacccattgcagacatcaccgacag 444
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>gb|DQ279897.1| Secale cereale translation initiation factor gene, partial cds
          Length = 1298

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 203  tcacccatggcagacatcacagacaggatca 233
            ||||||||||| |||||||||||||||||||
Sbjct: 1289 tcacccatggcggacatcacagacaggatca 1259
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>ref|XM_469841.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 859

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                        
Query: 178 tccttcacagcgcagatctgttctntcacccatggcagacatcac 222
           ||||||| |||||||||||| ||  ||||||||||||||||||||
Sbjct: 542 tccttcagagcgcagatctgctc-ctcacccatggcagacatcac 499
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                             
Query: 178      tccttcacagcgcagatctgttctntcacccatggcagacatcac 222
                ||||||| |||||||||||| ||  ||||||||||||||||||||
Sbjct: 31086565 tccttcagagcgcagatctgctc-ctcacccatggcagacatcac 31086522
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>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01
            genomic sequence, complete sequence
          Length = 168759

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                         
Query: 178  tccttcacagcgcagatctgttctntcacccatggcagacatcac 222
            ||||||| |||||||||||| ||  ||||||||||||||||||||
Sbjct: 9499 tccttcagagcgcagatctgctc-ctcacccatggcagacatcac 9542
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>emb|AJ312906.1|OSA312906 Oryza sativa mRNA for translation initiation factor, eIF-5A (eIF-5A
           gene)
          Length = 831

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                        
Query: 178 tccttcacagcgcagatctgttctntcacccatggcagacatcac 222
           ||||||| |||||||||||| ||  ||||||||||||||||||||
Sbjct: 537 tccttcagagcgcagatctgctc-ctcacccatggcagacatcac 494
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>emb|AJ252135.1|OSA252135 Oryza sativa mRNA for translation initiation factor eIF-5A
          Length = 722

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                        
Query: 178 tccttcacagcgcagatctgttctntcacccatggcagacatcac 222
           ||||||| |||||||||||| ||  ||||||||||||||||||||
Sbjct: 537 tccttcagagcgcagatctgctc-ctcacccatggcagacatcac 494
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>gb|DQ083198.1| Oryza sativa (indica cultivar-group) clone 5S10E11 mRNA sequence
          Length = 371

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                        
Query: 178 tccttcacagcgcagatctgttctntcacccatggcagacatcac 222
           ||||||| |||||||||||| ||  ||||||||||||||||||||
Sbjct: 200 tccttcagagcgcagatctgctc-ctcacccatggcagacatcac 157
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>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence,
            complete sequence
          Length = 128017

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 178  tccttcacagcgcagatctgttctntcacccatggcagacatcac 222
            ||||||| |||||||||||| ||  ||||||||||||||||||||
Sbjct: 7206 tccttcagagcgcagatctgctc-ctcacccatggcagacatcac 7163
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                             
Query: 178      tccttcacagcgcagatctgttctntcacccatggcagacatcac 222
                ||||||| |||||||||||| ||  ||||||||||||||||||||
Sbjct: 31177088 tccttcagagcgcagatctgctc-ctcacccatggcagacatcac 31177045
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>dbj|AK121592.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038B14, full
           insert sequence
          Length = 838

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                        
Query: 178 tccttcacagcgcagatctgttctntcacccatggcagacatcac 222
           ||||||| |||||||||||| ||  ||||||||||||||||||||
Sbjct: 547 tccttcagagcgcagatctgctc-ctcacccatggcagacatcac 504
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>dbj|AK060387.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-G06, full
           insert sequence
          Length = 947

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                        
Query: 178 tccttcacagcgcagatctgttctntcacccatggcagacatcac 222
           ||||||| |||||||||||| ||  ||||||||||||||||||||
Sbjct: 553 tccttcagagcgcagatctgctc-ctcacccatggcagacatcac 510
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>gb|DQ279896.1| Aegilops tauschii translation initiation factor gene, partial cds
          Length = 1282

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                     
Query: 193  atctgttctntcacccatggcagacatcacagacaggatca 233
            ||||||||| |||||||| || |||||||||||||||||||
Sbjct: 1282 atctgttct-tcacccattgcggacatcacagacaggatca 1243
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>gb|DQ279895.1| Eremopyrum bonaepartis translation initiation factor gene, partial
            cds
          Length = 1334

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                     
Query: 193  atctgttctntcacccatggcagacatcacagacaggatca 233
            ||||||||| |||||||| || |||||||||||||||||||
Sbjct: 1334 atctgttct-tcacccatcgcggacatcacagacaggatca 1295
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>gb|DQ279893.1| Pseudoroegneria spicata translation initiation factor gene, partial
            cds
          Length = 1358

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 38/41 (92%), Gaps = 1/41 (2%)
 Strand = Plus / Minus

                                                     
Query: 193  atctgttctntcacccatggcagacatcacagacaggatca 233
            ||||||||| |||||||| || |||||||||||||||||||
Sbjct: 1358 atctgttct-tcacccattgcggacatcacagacaggatca 1319
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>ref|NM_194115.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 863

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 40/44 (90%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                       
Query: 190 cagatctgttctntcacccatggcagacatcacagacaggatca 233
           |||||||||||| ||||||||||| |||||||||| || |||||
Sbjct: 542 cagatctgttct-tcacccatggcggacatcacagtcaagatca 500
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 40/44 (90%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                          
Query: 190    cagatctgttctntcacccatggcagacatcacagacaggatca 233
              |||||||||||| ||||||||||| |||||||||| || |||||
Sbjct: 704181 cagatctgttct-tcacccatggcggacatcacagtcaagatca 704139
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>dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1118_G09
          Length = 115815

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 40/44 (90%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                         
Query: 190   cagatctgttctntcacccatggcagacatcacagacaggatca 233
             |||||||||||| ||||||||||| |||||||||| || |||||
Sbjct: 42712 cagatctgttct-tcacccatggcggacatcacagtcaagatca 42670
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>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1513_F02
          Length = 126845

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 40/44 (90%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                         
Query: 190   cagatctgttctntcacccatggcagacatcacagacaggatca 233
             |||||||||||| ||||||||||| |||||||||| || |||||
Sbjct: 23988 cagatctgttct-tcacccatggcggacatcacagtcaagatca 23946
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>dbj|AK058206.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-A08, full
           insert sequence
          Length = 863

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 40/44 (90%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                       
Query: 190 cagatctgttctntcacccatggcagacatcacagacaggatca 233
           |||||||||||| ||||||||||| |||||||||| || |||||
Sbjct: 542 cagatctgttct-tcacccatggcggacatcacagtcaagatca 500
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>ref|NM_102425.2| Arabidopsis thaliana translation initiation factor AT1G26630 mRNA,
           complete cds
          Length = 929

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 58/69 (84%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                       
Query: 159 ttacttgccaccaccgatttccttcacagcgcagatctgttctntcacccatggcagaca 218
           ||||||||||||||| | |||||| || || |||||||| ||  || ||||||| |||||
Sbjct: 612 ttacttgccaccaccaacttccttgacggcacagatctgctc-ctctcccatggaagaca 554

                    
Query: 219 tcacagaca 227
           | |||||||
Sbjct: 553 tgacagaca 545
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>ref|NM_102426.3| Arabidopsis thaliana unknown protein AT1G26640 mRNA, complete cds
          Length = 1762

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 58/69 (84%), Gaps = 1/69 (1%)
 Strand = Plus / Plus

                                                                        
Query: 159  ttacttgccaccaccgatttccttcacagcgcagatctgttctntcacccatggcagaca 218
            ||||||||||||||| | |||||| || || |||||||| ||  || ||||||| |||||
Sbjct: 1655 ttacttgccaccaccaacttccttgacggcacagatctgctc-ctctcccatggaagaca 1713

                     
Query: 219  tcacagaca 227
            | |||||||
Sbjct: 1714 tgacagaca 1722
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>ref|XM_608522.2| PREDICTED: Bos taurus similar to SH2 domain protein 2A (T
            cell-specific adapter protein) (TSAd) (VEGF
            receptor-associated protein) (SH2 domain containing
            adapter protein) (LOC530059), mRNA
          Length = 2187

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 198  ttctntcacccatggcagacatcac 222
            |||| ||||||||||||||||||||
Sbjct: 1553 ttctctcacccatggcagacatcac 1529
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>gb|AY496435.1| Brassica napus eukaryotic translation initiation factor-5A mRNA,
           complete cds
          Length = 658

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 58/69 (84%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                       
Query: 159 ttacttgccaccaccgatttccttcacagcgcagatctgttctntcacccatggcagaca 218
           ||||||||||||||| | |||||| || || |||||||| ||  || ||||||| |||||
Sbjct: 480 ttacttgccaccaccaacttccttgacggcacagatctgctc-ctctcccatggaagaca 422

                    
Query: 219 tcacagaca 227
           | |||||||
Sbjct: 421 tgacagaca 413
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>gb|AF492850.1| Arabidopsis thaliana putative initiation factor 5A mRNA, complete
           cds
          Length = 726

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 58/69 (84%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                       
Query: 159 ttacttgccaccaccgatttccttcacagcgcagatctgttctntcacccatggcagaca 218
           ||||||||||||||| | |||||| || || |||||||| ||  || ||||||| |||||
Sbjct: 557 ttacttgccaccaccaacttccttgacggcacagatctgctc-ctctcccatggaagaca 499

                    
Query: 219 tcacagaca 227
           | |||||||
Sbjct: 498 tgacagaca 490
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>gb|AY055789.1| Arabidopsis thaliana At1g26630/T24P13_1 mRNA, complete cds
          Length = 480

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 58/69 (84%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                       
Query: 159 ttacttgccaccaccgatttccttcacagcgcagatctgttctntcacccatggcagaca 218
           ||||||||||||||| | |||||| || || |||||||| ||  || ||||||| |||||
Sbjct: 480 ttacttgccaccaccaacttccttgacggcacagatctgctc-ctctcccatggaagaca 422

                    
Query: 219 tcacagaca 227
           | |||||||
Sbjct: 421 tgacagaca 413
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>gb|AY039588.1| Arabidopsis thaliana At1g26630/T24P13_1 mRNA, complete cds
          Length = 765

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 58/69 (84%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                       
Query: 159 ttacttgccaccaccgatttccttcacagcgcagatctgttctntcacccatggcagaca 218
           ||||||||||||||| | |||||| || || |||||||| ||  || ||||||| |||||
Sbjct: 563 ttacttgccaccaccaacttccttgacggcacagatctgctc-ctctcccatggaagaca 505

                    
Query: 219 tcacagaca 227
           | |||||||
Sbjct: 504 tgacagaca 496
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>emb|BX814371.1|CNS0ABYU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB70ZA04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 689

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 58/69 (84%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                       
Query: 159 ttacttgccaccaccgatttccttcacagcgcagatctgttctntcacccatggcagaca 218
           ||||||||||||||| | |||||| || || |||||||| ||  || ||||||| |||||
Sbjct: 532 ttacttgccaccaccaacttccttgacggcacagatctgctc-ctctcccatggaagaca 474

                    
Query: 219 tcacagaca 227
           | |||||||
Sbjct: 473 tgacagaca 465
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>gb|AY084827.1| Arabidopsis thaliana clone 118823 mRNA, complete sequence
          Length = 781

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 58/69 (84%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                       
Query: 159 ttacttgccaccaccgatttccttcacagcgcagatctgttctntcacccatggcagaca 218
           ||||||||||||||| | |||||| || || |||||||| ||  || ||||||| |||||
Sbjct: 611 ttacttgccaccaccaacttccttgacggcacagatctgctc-ctctcccatggaagaca 553

                    
Query: 219 tcacagaca 227
           | |||||||
Sbjct: 552 tgacagaca 544
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>gb|AC006535.7|AC006535 Genomic sequence for Arabidopsis thaliana BAC T24P13 from chromosome
            I, complete sequence
          Length = 98630

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 58/69 (84%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                        
Query: 159  ttacttgccaccaccgatttccttcacagcgcagatctgttctntcacccatggcagaca 218
            ||||||||||||||| | |||||| || || |||||||| ||  || ||||||| |||||
Sbjct: 6856 ttacttgccaccaccaacttccttgacggcacagatctgctc-ctctcccatggaagaca 6798

                     
Query: 219  tcacagaca 227
            | |||||||
Sbjct: 6797 tgacagaca 6789
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>gb|AC182748.2| Mus musculus BAC clone RP23-348N13 from chromosome 17, complete
             sequence
          Length = 214515

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 85    ctatgtatgtgtatctcaaac 105
             |||||||||||||||||||||
Sbjct: 39339 ctatgtatgtgtatctcaaac 39359
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>gb|AC154443.2| Mus musculus BAC clone RP24-178N23 from chromosome 17, complete
             sequence
          Length = 174220

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 85    ctatgtatgtgtatctcaaac 105
             |||||||||||||||||||||
Sbjct: 90408 ctatgtatgtgtatctcaaac 90428
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>gb|AC104241.7| Homo sapiens chromosome 11, clone RP11-45A12, complete sequence
          Length = 147821

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    tcacccatggcagacatcac 222
              ||||||||||||||||||||
Sbjct: 141562 tcacccatggcagacatcac 141543
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>gb|AC123867.4| Mus musculus BAC clone RP23-127O13 from chromosome 14, complete sequence
          Length = 216834

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     aaaaaacacacaaatctgga 50
              ||||||||||||||||||||
Sbjct: 203687 aaaaaacacacaaatctgga 203668
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>gb|AC087880.24| Homo sapiens 12q BAC RP11-121J20 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 188361

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 203  tcacccatggcagacatcac 222
            ||||||||||||||||||||
Sbjct: 7321 tcacccatggcagacatcac 7340
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>gb|AC151836.3| Mus musculus BAC clone RP23-359F5 from chromosome 14, complete sequence
          Length = 230502

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    aaaaaacacacaaatctgga 50
             ||||||||||||||||||||
Sbjct: 82230 aaaaaacacacaaatctgga 82211
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>gb|AC092733.18| Homo sapiens chromosome 11, clone RP11-193F22, complete sequence
          Length = 195538

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   tcacccatggcagacatcac 222
             ||||||||||||||||||||
Sbjct: 63528 tcacccatggcagacatcac 63509
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>gb|AC087892.16| Homo sapiens 12q BAC RP11-3L23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 123004

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   tcacccatggcagacatcac 222
             ||||||||||||||||||||
Sbjct: 56842 tcacccatggcagacatcac 56861
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>emb|BX842561.12| Mouse DNA sequence from clone RP23-440P8 on chromosome 4, complete
             sequence
          Length = 112732

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    atgtatgtgtatctcaaaca 106
             ||||||||||||||||||||
Sbjct: 40859 atgtatgtgtatctcaaaca 40878
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>ref|XM_318419.2| Anopheles gambiae str. PEST ENSANGP00000002762
           (ENSANGG00000002286), partial mRNA
          Length = 12075

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 138 taggcaaccatgcaccgctg 157
           ||||||||||||||||||||
Sbjct: 329 taggcaaccatgcaccgctg 348
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>emb|AL671872.10| Mouse DNA sequence from clone RP23-151N17 on chromosome 4, complete
             sequence
          Length = 188386

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    atgtatgtgtatctcaaaca 106
             ||||||||||||||||||||
Sbjct: 79347 atgtatgtgtatctcaaaca 79366


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,939,114
Number of Sequences: 3902068
Number of extensions: 1939114
Number of successful extensions: 36096
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 36000
Number of HSP's gapped (non-prelim): 88
length of query: 233
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 211
effective length of database: 17,147,199,772
effective search space: 3618059151892
effective search space used: 3618059151892
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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