>CCD72_XENTR (Q28GR1) Coiled-coil domain-containing protein 72|
          Length = 64

 Score = 36.2 bits (82), Expect = 0.034
 Identities = 14/26 (53%), Positives = 21/26 (80%)
 Frame = -3

Query: 349 KQGGKAKPLKQAKVAEKDYDENDLAY 272
           ++GGK KPLKQ K + KD DE+++A+
Sbjct: 4   REGGKKKPLKQPKKSNKDMDEDEIAF 29

>CCD72_MOUSE (Q8K003) Coiled-coil domain-containing protein 72|
          Length = 64

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -3

Query: 349 KQGGKAKPLKQAKVAEKDYDENDLAY 272
           ++GGK KPLKQ K   K+ DE D A+
Sbjct: 4   REGGKKKPLKQPKKQAKEMDEEDKAF 29

>CCD72_HUMAN (Q9Y2S6) Coiled-coil domain-containing protein 72|
          Length = 64

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -3

Query: 349 KQGGKAKPLKQAKVAEKDYDENDLAY 272
           ++GGK KPLKQ K   K+ DE D A+
Sbjct: 4   REGGKKKPLKQPKKQAKEMDEEDKAF 29

>Y022_THEAC (Q9HM47) UPF0204 protein Ta0022|
          Length = 256

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +1

Query: 121 HRLSFSGHYEWAGRLISSHSSSDQI--LPAHPSGQPWPSAPSG 243
           H +S SG Y++   ++S HSS+  +  L AHP+G   PSA  G
Sbjct: 50  HDMSLSGKYDYLV-VLSRHSSAADVKSLTAHPTGNFGPSADLG 91

>COHA1_CHICK (Q90584) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen|
           2) (180 kDa bullous pemphigoid antigen 2) (Fragment)
          Length = 1146

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 157 GRLISSHSSSDQILPAHPSGQPWPSAPSGP 246
           G++IS+  SS   LP  P G P P  P+GP
Sbjct: 389 GKVISAEGSSTIALPG-PPGPPGPIGPTGP 417


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,532,350
Number of Sequences: 219361
Number of extensions: 660623
Number of successful extensions: 2520
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2505
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)