| Clone Name | rbaal13o10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT008936.1| Triticum aestivum clone wdi1c.pk002.b10:fis, full insert mRNA sequence Length = 1192 Score = 632 bits (319), Expect = e-178 Identities = 542/614 (88%), Gaps = 13/614 (2%) Strand = Plus / Minus Query: 5 aaacttttgttccacacacaccattacaccaacatttgcatactgaacataaagcccaga 64 |||||||||| ||| || ||||| ||||||||||||||||| | |||||| |||| ||| Sbjct: 1091 aaacttttgtccca-acgcaccagtacaccaacatttgcatgccgaacatcaagcagaga 1033 Query: 65 attatg-ggctgcaaagcagtacaacagtagtactatgagatacactatctctgaagtcc 123 | |||| || |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1032 actatgtgggtgcaaagcagtacaacagtagtactatgagatacactatctctgaaaccc 973 Query: 124 taacacgccagaaataaagccaaggatgagttgcctgatcatcagaccacaccgggtcac 183 ||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct: 972 taacacgccagaaataaagccaaggatgagttgcc--------agaccacaccggggcac 921 Query: 184 caaagacccgttattacgtataccgctcgcttgactggccaaagtggccagagaagctga 243 | ||||| || |||||||||||| ||||| |||||||| |||||| | |||||||||| Sbjct: 920 agaggaccccttgttacgtataccggtcgctcgactggccgaagtggtcggagaagctga 861 Query: 244 catggtgaccgtgatggtggaagaagtcgtcgtctttctgcgccgcaggaatcatggtga 303 |||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 860 gatggtggccgtgatggtggaagaagtcgtcgtctttgcgcgccgcttgaatcatggtga 801 Query: 304 aggcgggagccggtgcggccactctcttgttgttctcctgcgaggatatcgtcttggatg 363 ||||||||||||| ||||| ||||||||| ||||||| || ||||| |||| |||||| | Sbjct: 800 aggcgggagccggggcggcgactctcttgctgttctcttgggaggacatcgccttggacg 741 Query: 364 ccgaggtgggtcgatctccggctgcgccactacccagccgtagataggttgagcccaagg 423 ||||| || ||| |||||||||||||| || || |||||||||| |||||| ||||||| Sbjct: 740 ccgagttgcttcggtctccggctgcgccgctgcctagccgtagatgggttgaacccaagg 681 Query: 424 aatttgcgccatccgcaatggccttcgtgcaggcactgccagactgctgctgctgttg-- 481 |||| |||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 680 aattcgcgccatccgcaatggccttcgtgcatgcactgccagactgctgctgctgctgct 621 Query: 482 -gagctgtttggaattgaggaaacgtccaccggagcctcttgctcgcttcattgcgtgaa 540 |||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||||| Sbjct: 620 tcagctgtttggaattgaggaaacgtcccccggaacctcttgcccgcttcatcgcgtgaa 561 Query: 541 gatgacgagactcatggaggtagggctttctgtttttggtgagtttgttctgggcctcta 600 |||| |||||||| ||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 560 gatggcgagactcgtggaggtagggctttctgttttttgtgagtttattctgggcctcta 501 Query: 601 acttagcgcgcagc 614 |||| ||||||||| Sbjct: 500 acttggcgcgcagc 487
>gb|BT009542.1| Triticum aestivum clone wr1.pk0153.c7:fis, full insert mRNA sequence Length = 1022 Score = 559 bits (282), Expect = e-156 Identities = 456/515 (88%), Gaps = 8/515 (1%) Strand = Plus / Minus Query: 100 tgagatacactatctctgaagtcctaacacgccagaaataaagccaaggatgagttgcct 159 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 826 tgagataaactatctctgaagtcctaacacgccagaaataaagccaaggatgagttgcct 767 Query: 160 gatcatcagaccacaccgggtcaccaaagacccgttattacgtataccgctcgcttgact 219 || |||||||||| | | | ||||| |||||||||||| || |||||||||| Sbjct: 766 ga--------ccacaccggggcgcggaggaccccttattacgtatatcggtcgcttgact 715 Query: 220 ggccaaagtggccagagaagctgacatggtgaccgtgatggtggaagaagtcgtcgtctt 279 ||||||| || || |||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 714 ggccaaaatgaccggagaagctgagatggtgggcgtgatggtggaagaagtcgtcgtctt 655 Query: 280 tctgcgccgcaggaatcatggtgaaggcgggagccggtgcggccactctcttgttgttct 339 | ||||||| ||||||||||||||||||||||||| ||||| ||||||||| |||||| Sbjct: 654 tgcgcgccgcttgaatcatggtgaaggcgggagccggggcggcgactctcttgctgttct 595 Query: 340 cctgcgaggatatcgtcttggatgccgaggtgggtcgatctccggctgcgccactaccca 399 | || ||||| |||| |||||| ||||| ||| ||| |||||||||||||| || || | Sbjct: 594 cttgggaggacatcgccttggacaccgagttggttcggtctccggctgcgccgctgccta 535 Query: 400 gccgtagataggttgagcccaaggaatttgcgccatccgcaatggccttcgtgcaggcac 459 ||||||||| ||| || |||| |||||| |||||||||||||||||||| |||||||||| Sbjct: 534 gccgtagatgggtcgaacccagggaattcgcgccatccgcaatggccttggtgcaggcac 475 Query: 460 tgccagactgctgctgctgttggagctgtttggaattgaggaaacgtccaccggagcctc 519 ||||||||||||||||||| | |||||||||||||||||||||||||| ||||| |||| Sbjct: 474 tgccagactgctgctgctgcttcagctgtttggaattgaggaaacgtcccccggaacctc 415 Query: 520 ttgctcgcttcattgcgtgaagatgacgagactcatggaggtagggctttctgtttttgg 579 |||| |||||||| ||||||||||| || ||||| ||||||||||||||||||||||||| Sbjct: 414 ttgcccgcttcatcgcgtgaagatggcgcgactcgtggaggtagggctttctgtttttgg 355 Query: 580 tgagtttgttctgggcctctaacttagcgcgcagc 614 ||||||| ||||||||||||||||||||||||||| Sbjct: 354 tgagtttattctgggcctctaacttagcgcgcagc 320 Score = 91.7 bits (46), Expect = 3e-15 Identities = 71/78 (91%), Gaps = 1/78 (1%) Strand = Plus / Minus Query: 5 aaacttttgttccacacacaccattacaccaacatttgcatactgaacataaagcccaga 64 |||||||||||||| || ||||| ||||||||||||||||||| |||||| ||||| ||| Sbjct: 906 aaacttttgttcca-acgcaccagtacaccaacatttgcataccgaacatcaagccgaga 848 Query: 65 attatgggctgcaaagca 82 | |||||||||||||||| Sbjct: 847 actatgggctgcaaagca 830
>ref|NM_104294.2| Arabidopsis thaliana transcription factor AT1G54160 mRNA, complete cds Length = 1371 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 494 attgaggaaacgtccaccggagcctcttgctcgcttcattgcgtgaagatgacgagactc 553 ||||||||||||||||||||||||||| |||| ||| | || |||||||| |||||||| Sbjct: 904 attgaggaaacgtccaccggagcctctagctctctttaaagcatgaagatggcgagactc 845 Query: 554 atggaggtagggctttctgtttttggtgagtttgttctg 592 ||| ||||| || || | | |||| ||||||||||||| Sbjct: 844 atgaaggtacggtttacggcatttgatgagtttgttctg 806
>gb|AY081445.1| Arabidopsis thaliana unknown protein (At1g54160) mRNA, complete cds Length = 990 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 494 attgaggaaacgtccaccggagcctcttgctcgcttcattgcgtgaagatgacgagactc 553 ||||||||||||||||||||||||||| |||| ||| | || |||||||| |||||||| Sbjct: 705 attgaggaaacgtccaccggagcctctagctctctttaaagcatgaagatggcgagactc 646 Query: 554 atggaggtagggctttctgtttttggtgagtttgttctg 592 ||| ||||| || || | | |||| ||||||||||||| Sbjct: 645 atgaaggtacggtttacggcatttgatgagtttgttctg 607
>gb|AF386957.1|AF386957 Arabidopsis thaliana Unknown protein (F15I1.26) mRNA, complete cds Length = 1370 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 494 attgaggaaacgtccaccggagcctcttgctcgcttcattgcgtgaagatgacgagactc 553 ||||||||||||||||||||||||||| |||| ||| | || |||||||| |||||||| Sbjct: 904 attgaggaaacgtccaccggagcctctagctctctttaaagcatgaagatggcgagactc 845 Query: 554 atggaggtagggctttctgtttttggtgagtttgttctg 592 ||| ||||| || || | | |||| ||||||||||||| Sbjct: 844 atgaaggtacggtttacggcatttgatgagtttgttctg 806
>gb|AC006577.2|F15I1 Sequence of BAC F15I1 from Arabidopsis thaliana chromosome 1, complete sequence Length = 89035 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 494 attgaggaaacgtccaccggagcctcttgctcgcttcattgcgtgaagatgacgagactc 553 ||||||||||||||||||||||||||| |||| ||| | || |||||||| |||||||| Sbjct: 78136 attgaggaaacgtccaccggagcctctagctctctttaaagcatgaagatggcgagactc 78195 Query: 554 atggaggtagggct 567 ||| ||||| |||| Sbjct: 78196 atgaaggtacggct 78209
>gb|BT017464.1| Zea mays clone EL01N0407G01.c mRNA sequence Length = 1208 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 495 ttgaggaaacgtccaccggagcctcttgctcgcttcattgcgtgaagatgacgagactca 554 |||||||| ||||||||||| |||| ||| | ||||||||| |||||||| | ||||||| Sbjct: 573 ttgaggaatcgtccaccggaacctcgtgccctcttcattgcatgaagatgcctagactca 514 Query: 555 tggaggtagggctttc 570 || ||||| ||||||| Sbjct: 513 tgaaggtaaggctttc 498 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 130 gccagaaataaagccaaggatgagttgcctga 161 ||||||||| ||||||||||||| |||||||| Sbjct: 1009 gccagaaattaagccaaggatgaattgcctga 978
>gb|AY110887.1| Zea mays CL807_1 mRNA sequence Length = 1197 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 495 ttgaggaaacgtccaccggagcctcttgctcgcttcattgcgtgaagatgacgagactca 554 |||||||| ||||||||||| |||| ||| | ||||||||| |||||||| | ||||||| Sbjct: 577 ttgaggaatcgtccaccggaacctcgtgccctcttcattgcatgaagatgcctagactca 518 Query: 555 tggaggtagggctttc 570 || ||||| ||||||| Sbjct: 517 tgaaggtaaggctttc 502 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 130 gccagaaataaagccaaggatgagttgcctga 161 ||||||||| ||||||||||||| |||||||| Sbjct: 1013 gccagaaattaagccaaggatgaattgcctga 982
>ref|XM_468061.1| Oryza sativa (japonica cultivar-group), mRNA Length = 909 Score = 52.0 bits (26), Expect = 0.002 Identities = 70/84 (83%), Gaps = 3/84 (3%) Strand = Plus / Minus Query: 211 cgcttgactggccaaagtggccagagaagct---gacatggtgaccgtgatggtggaaga 267 |||||| ||||||||| ||||| |||||||| || |||||| || || ||| ||||| Sbjct: 847 cgcttgcctggccaaaatggccggagaagctactgagatggtggccatggcggtcgaaga 788 Query: 268 agtcgtcgtctttctgcgccgcag 291 || ||||||||||||| ||||||| Sbjct: 787 aggcgtcgtctttctgtgccgcag 764
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 70/84 (83%), Gaps = 3/84 (3%) Strand = Plus / Plus Query: 211 cgcttgactggccaaagtggccagagaagct---gacatggtgaccgtgatggtggaaga 267 |||||| ||||||||| ||||| |||||||| || |||||| || || ||| ||||| Sbjct: 32813006 cgcttgcctggccaaaatggccggagaagctactgagatggtggccatggcggtcgaaga 32813065 Query: 268 agtcgtcgtctttctgcgccgcag 291 || ||||||||||||| ||||||| Sbjct: 32813066 aggcgtcgtctttctgtgccgcag 32813089 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 588 ttctgggcctctaacttagcgcgcag 613 |||||||||||||||||||| ||||| Sbjct: 32813519 ttctgggcctctaacttagcacgcag 32813544 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 aagcccagaattatgggctgcaaa 79 ||||||||| |||||||||||||| Sbjct: 32812795 aagcccagacttatgggctgcaaa 32812818
>dbj|AP005538.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0013K01 Length = 139464 Score = 52.0 bits (26), Expect = 0.002 Identities = 70/84 (83%), Gaps = 3/84 (3%) Strand = Plus / Plus Query: 211 cgcttgactggccaaagtggccagagaagct---gacatggtgaccgtgatggtggaaga 267 |||||| ||||||||| ||||| |||||||| || |||||| || || ||| ||||| Sbjct: 71024 cgcttgcctggccaaaatggccggagaagctactgagatggtggccatggcggtcgaaga 71083 Query: 268 agtcgtcgtctttctgcgccgcag 291 || ||||||||||||| ||||||| Sbjct: 71084 aggcgtcgtctttctgtgccgcag 71107 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 588 ttctgggcctctaacttagcgcgcag 613 |||||||||||||||||||| ||||| Sbjct: 71537 ttctgggcctctaacttagcacgcag 71562 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 aagcccagaattatgggctgcaaa 79 ||||||||| |||||||||||||| Sbjct: 70813 aagcccagacttatgggctgcaaa 70836
>gb|AF120092.1|AF120092 Nicotiana tabacum CCAAT-binding transcription factor subunit B mRNA, complete cds Length = 966 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Minus Query: 522 gctcgcttcattgcgtgaagatgacgagactcatggaggtagggctttctgtttttg 578 |||| ||||||||||||| |||| |||||||| || || || |||||||||| |||| Sbjct: 161 gctctcttcattgcgtgacgatgtcgagactcgtgaagatatggctttctgtctttg 105
>emb|AL096870.5|CNS00YVI Human chromosome 14 DNA sequence BAC R-934B9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196533 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 576 ttggtgagtttgttctgggcctct 599 |||||||||||||||||||||||| Sbjct: 141244 ttggtgagtttgttctgggcctct 141221
>ref|XM_468639.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1356 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 522 gctcgcttcattgcgtgaagatgacgagactcatggaggtagggctt 568 ||||||||||| || ||| |||| ||||| ||||||||||| ||||| Sbjct: 676 gctcgcttcatagcatgatgatgtcgagattcatggaggtaaggctt 630
>ref|XM_469371.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1358 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 541 gatgacgagactcatggaggtagggctttct 571 |||||||||||||||| || ||||||||||| Sbjct: 685 gatgacgagactcatgaagatagggctttct 655
>emb|AL355136.19| Human DNA sequence from clone RP11-435P18 on chromosome 13, complete sequence Length = 200059 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 450 gtgcaggcactgccagactgctg 472 ||||||||||||||||||||||| Sbjct: 139566 gtgcaggcactgccagactgctg 139544
>dbj|AK099549.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033E22, full insert sequence Length = 643 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 541 gatgacgagactcatggaggtagggctttct 571 |||||||||||||||| || ||||||||||| Sbjct: 61 gatgacgagactcatgaagatagggctttct 31
>dbj|AK071595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106F21, full insert sequence Length = 1631 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 522 gctcgcttcattgcgtgaagatgacgagactcatggaggtagggctt 568 ||||||||||| || ||| |||| ||||| ||||||||||| ||||| Sbjct: 895 gctcgcttcatagcatgatgatgtcgagattcatggaggtaaggctt 849
>dbj|AK069854.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036P10, full insert sequence Length = 1959 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 541 gatgacgagactcatggaggtagggctttct 571 |||||||||||||||| || ||||||||||| Sbjct: 1239 gatgacgagactcatgaagatagggctttct 1209
>dbj|AK062135.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F05, full insert sequence Length = 1557 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 522 gctcgcttcattgcgtgaagatgacgagactcatggaggtagggctt 568 ||||||||||| || ||| |||| ||||| ||||||||||| ||||| Sbjct: 859 gctcgcttcatagcatgatgatgtcgagattcatggaggtaaggctt 813
>emb|AL663117.14| Mouse DNA sequence from clone RP23-217A20 on chromosome 11, complete sequence Length = 148291 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 ccagagaagctgacatggtgacc 253 ||||||||||||||||||||||| Sbjct: 12416 ccagagaagctgacatggtgacc 12394
>ref|NM_112256.1| Arabidopsis thaliana transcription factor AT3G14020 mRNA, complete cds Length = 927 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 495 ttgaggaaacgtccaccggagcctct 520 ||||||||||||||||| |||||||| Sbjct: 683 ttgaggaaacgtccaccagagcctct 658
>ref|NM_013750.1| Mus musculus pleckstrin homology-like domain, family A, member 3 (Phlda3), mRNA Length = 1419 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 222 ccaaagtggccagagaagctgacatg 247 ||||||||| |||||||||||||||| Sbjct: 780 ccaaagtggacagagaagctgacatg 755
>gb|AY022958.1| Oryza sativa microsatellite MRG5283 containing (CTG)X8, genomic sequence Length = 224 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 522 gctcgcttcattgcgtgaagatgacgagactcatggaggtagggct 567 ||||||||||| || ||| |||| ||||| ||||||||||| |||| Sbjct: 171 gctcgcttcatagcatgatgatgtcgagattcatggaggtaaggct 216
>gb|AC092262.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C05 map C12819S, complete sequence Length = 113266 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 522 gctcgcttcattgcgtgaagatgacgagactcatggaggtagggct 567 ||||||||||| || ||| |||| ||||| ||||||||||| |||| Sbjct: 20097 gctcgcttcatagcatgatgatgtcgagattcatggaggtaaggct 20052
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 522 gctcgcttcattgcgtgaagatgacgagactcatggaggtagggct 567 ||||||||||| || ||| |||| ||||| ||||||||||| |||| Sbjct: 16782247 gctcgcttcatagcatgatgatgtcgagattcatggaggtaaggct 16782202
>gb|BC023408.1| Mus musculus pleckstrin homology-like domain, family A, member 3, mRNA (cDNA clone MGC:30999 IMAGE:5252055), complete cds Length = 1390 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 222 ccaaagtggccagagaagctgacatg 247 ||||||||| |||||||||||||||| Sbjct: 730 ccaaagtggacagagaagctgacatg 705
>gb|BC023376.1| Mus musculus pleckstrin homology-like domain, family A, member 3, mRNA (cDNA clone IMAGE:5008279) Length = 1390 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 222 ccaaagtggccagagaagctgacatg 247 ||||||||| |||||||||||||||| Sbjct: 730 ccaaagtggacagagaagctgacatg 705
>dbj|AK003767.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110018C11 product:pleckstrin homology-like domain, family A, member 3, full insert sequence Length = 1432 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 222 ccaaagtggccagagaagctgacatg 247 ||||||||| |||||||||||||||| Sbjct: 794 ccaaagtggacagagaagctgacatg 769
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 522 gctcgcttcattgcgtgaagatgacgagactcatggaggtagggct 567 ||||||||||| || ||| |||| ||||| ||||||||||| |||| Sbjct: 16775880 gctcgcttcatagcatgatgatgtcgagattcatggaggtaaggct 16775835
>gb|AC008895.7| Homo sapiens chromosome 19 clone CTD-2233K9, complete sequence Length = 146008 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 467 ctgctgctgctgttggagctgt 488 |||||||||||||||||||||| Sbjct: 48980 ctgctgctgctgttggagctgt 49001
>dbj|AK214255.1| Mus musculus cDNA, clone:Y2G0131D08, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000038945, based on BLAT search Length = 396 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 222 ccaaagtggccagagaagctgacatg 247 ||||||||| |||||||||||||||| Sbjct: 122 ccaaagtggacagagaagctgacatg 97
>dbj|AK210974.1| Mus musculus cDNA, clone:Y2G0120E05, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000038945, based on BLAT search Length = 327 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 222 ccaaagtggccagagaagctgacatg 247 ||||||||| |||||||||||||||| Sbjct: 122 ccaaagtggacagagaagctgacatg 97
>dbj|AK210690.1| Mus musculus cDNA, clone:Y2G0119E13, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000038945, based on BLAT search Length = 391 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 222 ccaaagtggccagagaagctgacatg 247 ||||||||| |||||||||||||||| Sbjct: 122 ccaaagtggacagagaagctgacatg 97
>dbj|AK206046.1| Mus musculus cDNA, clone:Y2G0103J16, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000038945, based on BLAT search Length = 394 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 222 ccaaagtggccagagaagctgacatg 247 ||||||||| |||||||||||||||| Sbjct: 124 ccaaagtggacagagaagctgacatg 99
>dbj|AK199905.1| Mus musculus cDNA, clone:Y1G0132L22, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000038945, based on BLAT search Length = 377 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 222 ccaaagtggccagagaagctgacatg 247 ||||||||| |||||||||||||||| Sbjct: 128 ccaaagtggacagagaagctgacatg 103
>emb|BX088703.5| Zebrafish DNA sequence from clone CH211-241D14 in linkage group 17, complete sequence Length = 87046 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 cacacaccattacaccaacatt 40 |||||||||||||||||||||| Sbjct: 70528 cacacaccattacaccaacatt 70549
>dbj|AB019229.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MDC16 Length = 84294 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 495 ttgaggaaacgtccaccggagcctct 520 ||||||||||||||||| |||||||| Sbjct: 69367 ttgaggaaacgtccaccagagcctct 69342
>emb|BX000443.5| Zebrafish DNA sequence from clone DKEY-5K18 in linkage group 17, complete sequence Length = 193168 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 cacacaccattacaccaacatt 40 |||||||||||||||||||||| Sbjct: 144035 cacacaccattacaccaacatt 144014
>gb|AY820280.1| Epinephelus coioides corticotropin-releasing hormone mRNA, partial cds Length = 369 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 461 gccagactgctgctgctgttg 481 ||||||||||||||||||||| Sbjct: 136 gccagactgctgctgctgttg 116
>gb|AC007441.9| Drosophila melanogaster clone BACR10E03, complete sequence Length = 195212 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 ctgctgctgctgttggagctgtttg 491 ||||||||||||||| ||||||||| Sbjct: 6975 ctgctgctgctgttgcagctgtttg 6999
>gb|AY158017.1| Fucaceae mixed library SB-2002 microsatellite L94 sequence Length = 532 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagctg 487 ||||||||||||||||||||| Sbjct: 264 ctgctgctgctgttggagctg 244
>gb|BC058949.1| Mus musculus DNA segment, Chr 19, Wayne State University 162, expressed, mRNA (cDNA clone MGC:66691 IMAGE:5721290), complete cds Length = 3921 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagctg 487 ||||||||||||||||||||| Sbjct: 512 ctgctgctgctgttggagctg 492
>ref|XM_322083.1| Neurospora crassa OR74A hypothetical protein (NCU09980.1) partial mRNA Length = 2763 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 468 tgctgctgctgttggagctgt 488 ||||||||||||||||||||| Sbjct: 290 tgctgctgctgttggagctgt 270
>ref|XM_952870.1| Neurospora crassa OR74A hypothetical protein (NCU09980.1) partial mRNA Length = 2763 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 468 tgctgctgctgttggagctgt 488 ||||||||||||||||||||| Sbjct: 290 tgctgctgctgttggagctgt 270
>emb|CR769783.10| Zebrafish DNA sequence from clone DKEY-40A23 in linkage group 1, complete sequence Length = 222035 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 aaagtggccagagaagctgacatgg 248 ||||| ||||||||||||||||||| Sbjct: 41042 aaagtagccagagaagctgacatgg 41018
>gb|AE008873.1| Salmonella typhimurium LT2, section 177 of 220 of the complete genome Length = 21337 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 atcatggtgaaggcgggagcc 314 ||||||||||||||||||||| Sbjct: 14630 atcatggtgaaggcgggagcc 14610
>gb|BC026369.1| Mus musculus DNA segment, Chr 19, Wayne State University 162, expressed, mRNA (cDNA clone MGC:31104 IMAGE:4160029), complete cds Length = 2241 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagctg 487 ||||||||||||||||||||| Sbjct: 543 ctgctgctgctgttggagctg 523
>emb|BX537132.8| Zebrafish DNA sequence from clone RP71-8L21 in linkage group 1, complete sequence Length = 132287 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 aaagtggccagagaagctgacatgg 248 ||||| ||||||||||||||||||| Sbjct: 97503 aaagtagccagagaagctgacatgg 97527
>gb|AC156982.8| Mus musculus chromosome 19, clone RP23-183N3, complete sequence Length = 216311 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagctg 487 ||||||||||||||||||||| Sbjct: 197809 ctgctgctgctgttggagctg 197789
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagctg 487 ||||||||||||||||||||| Sbjct: 86433 ctgctgctgctgttggagctg 86413
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 467 ctgctgctgctgttggagctg 487 ||||||||||||||||||||| Sbjct: 43440 ctgctgctgctgttggagctg 43460
>dbj|AK142695.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched library, clone:D830007O22 product:hypothetical protein, full insert sequence Length = 3871 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagctg 487 ||||||||||||||||||||| Sbjct: 549 ctgctgctgctgttggagctg 529
>ref|NM_146099.2| Mus musculus DNA segment, Chr 19, Wayne State University 162, expressed (D19Wsu162e), mRNA Length = 3921 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagctg 487 ||||||||||||||||||||| Sbjct: 512 ctgctgctgctgttggagctg 492
>dbj|AK154686.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630103G18 product:hypothetical protein, full insert sequence Length = 3893 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagctg 487 ||||||||||||||||||||| Sbjct: 582 ctgctgctgctgttggagctg 562
>dbj|AK169294.1| Mus musculus 16 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920177B08 product:hypothetical protein, full insert sequence Length = 3955 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagctg 487 ||||||||||||||||||||| Sbjct: 639 ctgctgctgctgttggagctg 619
>dbj|AK052400.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430003C10 product:hypothetical Proline-rich region/Cytochrome c family heme-binding site containing protein, full insert sequence Length = 2603 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagctg 487 ||||||||||||||||||||| Sbjct: 538 ctgctgctgctgttggagctg 518
>dbj|AK087487.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130305F05 product:DNA segment, Chr 19, Wayne State University 162, expressed, full insert sequence Length = 3873 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagctg 487 ||||||||||||||||||||| Sbjct: 550 ctgctgctgctgttggagctg 530
>dbj|AK078491.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820415N12 product:hypothetical Proline-rich region/Cytochrome c family heme-binding site containing protein, full insert sequence Length = 2702 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagctg 487 ||||||||||||||||||||| Sbjct: 549 ctgctgctgctgttggagctg 529
>gb|AC007669.6|AC007669 Drosophila melanogaster, chromosome 3R, region 88A-88A, BAC clone BACR25B05, complete sequence Length = 181794 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 ctgctgctgctgttggagctgtttg 491 ||||||||||||||| ||||||||| Sbjct: 148785 ctgctgctgctgttgcagctgtttg 148809
>gb|AY754539.1| Drosophila pseudoobscura hunchback (hb) gene, exon 1 and partial cds Length = 1992 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagctg 487 ||||||||||||||||||||| Sbjct: 1308 ctgctgctgctgttggagctg 1288
>gb|AY754538.1| Drosophila affinis hunchback (hb) gene, exon 1 and partial cds Length = 1959 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagctg 487 ||||||||||||||||||||| Sbjct: 1278 ctgctgctgctgttggagctg 1258
>emb|Z19547.1|STOPPRBST S.typhimurium gene for orotate phosphoribosyltransferase Length = 645 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 atcatggtgaaggcgggagcc 314 ||||||||||||||||||||| Sbjct: 314 atcatggtgaaggcgggagcc 334
>gb|AE003702.3| Drosophila melanogaster chromosome 3R, section 40 of 118 of the complete sequence Length = 227413 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 ctgctgctgctgttggagctgtttg 491 ||||||||||||||| ||||||||| Sbjct: 169232 ctgctgctgctgttgcagctgtttg 169256
>dbj|AB090813.1| Anopheles gambiae retrotransposon RTAg4 DNA, complete sequence Length = 7072 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 468 tgctgctgctgttggagctgt 488 ||||||||||||||||||||| Sbjct: 3415 tgctgctgctgttggagctgt 3435
>emb|AL929252.6| Zebrafish DNA sequence from clone CH211-150G13 in linkage group 7, complete sequence Length = 173244 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 cataaaacttttgttccacacacac 25 ||||||||||||||| ||||||||| Sbjct: 88298 cataaaacttttgtttcacacacac 88274
>gb|AC161865.4| Mus musculus chromosome 19, clone RP23-218F7, complete sequence Length = 206019 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 467 ctgctgctgctgttggagctg 487 ||||||||||||||||||||| Sbjct: 197095 ctgctgctgctgttggagctg 197115
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gtgaccgtgatggtggaaga 267 |||||||||||||||||||| Sbjct: 842395 gtgaccgtgatggtggaaga 842414
>gb|BT018371.1| Zea mays clone EL01N0306C05.d mRNA sequence Length = 1367 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 aaagccaaggatgagttgcc 158 |||||||||||||||||||| Sbjct: 1133 aaagccaaggatgagttgcc 1114
>emb|CR956370.6| Pig DNA sequence from clone CH242-181F19 on chromosome 7, complete sequence Length = 178646 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 gccagaaataaagccaagga 149 |||||||||||||||||||| Sbjct: 109681 gccagaaataaagccaagga 109662
>ref|XM_538361.2| PREDICTED: Canis familiaris similar to trinucleotide repeat containing 6b isoform 1, transcript variant 1 (LOC481240), mRNA Length = 6095 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagctgttt 490 |||||||||||||||| ||||||| Sbjct: 2677 ctgctgctgctgttggtgctgttt 2654
>ref|XM_854318.1| PREDICTED: Canis familiaris similar to trinucleotide repeat containing 6b isoform 1, transcript variant 4 (LOC481240), mRNA Length = 5918 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagctgttt 490 |||||||||||||||| ||||||| Sbjct: 2677 ctgctgctgctgttggtgctgttt 2654
>ref|XM_854247.1| PREDICTED: Canis familiaris similar to trinucleotide repeat containing 6b isoform 1, transcript variant 2 (LOC481240), mRNA Length = 5936 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagctgttt 490 |||||||||||||||| ||||||| Sbjct: 2677 ctgctgctgctgttggtgctgttt 2654
>gb|AC146175.1| Pan troglodytes BAC clone CH251-559G23 from Y, complete sequence Length = 228185 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 tgctgctgctgttggagctgtttg 491 |||||||||||||| ||||||||| Sbjct: 132687 tgctgctgctgttgcagctgtttg 132710
>gb|AC145769.1| Pan troglodytes BAC clone CH251-203H3 from Y, complete sequence Length = 165958 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 tgctgctgctgttggagctgtttg 491 |||||||||||||| ||||||||| Sbjct: 70460 tgctgctgctgttgcagctgtttg 70483
>ref|XM_502417.1| Yarrowia lipolytica CLIB122, YALI0D04785g predicted mRNA Length = 1812 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 actgctgctgctgttggagc 485 |||||||||||||||||||| Sbjct: 1743 actgctgctgctgttggagc 1724
>emb|AL133342.14| Human DNA sequence from clone RP5-906C1 on chromosome 20 Contains the 5' end of the gene for P-Rex1 protein (KIAA1415, PREX1) and a CpG Island, complete sequence Length = 110814 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 ctgctgttggagctgtttgg 492 |||||||||||||||||||| Sbjct: 28052 ctgctgttggagctgtttgg 28033
>gb|AC117602.9| Mus musculus chromosome 5, clone RP23-462C22, complete sequence Length = 205604 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 tgaacataaagcccagaatt 67 |||||||||||||||||||| Sbjct: 150003 tgaacataaagcccagaatt 149984
>emb|BX649520.20| Zebrafish DNA sequence from clone DKEY-174E3 in linkage group 13, complete sequence Length = 219709 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cacaccattacaccaacatt 40 |||||||||||||||||||| Sbjct: 168623 cacaccattacaccaacatt 168604
>emb|AL603744.3| Zebrafish DNA sequence from clone BUSM1-79M10 Contains two novel genes and two transposase/reverse transcriptase pseudogenes, complete sequence Length = 72590 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 tgcaggcactgccagactgc 470 |||||||||||||||||||| Sbjct: 21784 tgcaggcactgccagactgc 21765
>emb|BX323809.14| Zebrafish DNA sequence from clone DKEY-42J10 in linkage group 10, complete sequence Length = 194108 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 gtgcaggcactgccagactg 469 |||||||||||||||||||| Sbjct: 177958 gtgcaggcactgccagactg 177939
>dbj|BS000607.1| Pan troglodytes chromosome Y clone:PTB-081L16, complete sequences Length = 178480 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 468 tgctgctgctgttggagctgtttg 491 |||||||||||||| ||||||||| Sbjct: 637 tgctgctgctgttgcagctgtttg 614
>dbj|BS000558.1| Pan troglodytes chromosome Y clone:PTB-471H19, complete sequences Length = 156402 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 468 tgctgctgctgttggagctgtttg 491 |||||||||||||| ||||||||| Sbjct: 82768 tgctgctgctgttgcagctgtttg 82745
>emb|BX569799.6| Zebrafish DNA sequence from clone DKEY-10C21 in linkage group 24, complete sequence Length = 56631 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 gtgcaggcactgccagactg 469 |||||||||||||||||||| Sbjct: 4575 gtgcaggcactgccagactg 4556
>emb|BX571829.7| Zebrafish DNA sequence from clone DKEY-256M7 in linkage group 12, complete sequence Length = 196942 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cacacaccattacaccaaca 38 |||||||||||||||||||| Sbjct: 191288 cacacaccattacaccaaca 191269
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 468 tgctgctgctgttggagctgtttg 491 |||||||||||||| ||||||||| Sbjct: 514265 tgctgctgctgttgcagctgtttg 514242
>emb|BX321902.9| Zebrafish DNA sequence from clone DKEYP-6E8 in linkage group 6, complete sequence Length = 73408 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 ctgctgctgctgttggagct 486 |||||||||||||||||||| Sbjct: 58011 ctgctgctgctgttggagct 58030
>gb|AC161034.23| Medicago truncatula clone mth2-53o24, complete sequence Length = 128806 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 actgctgctgctgttggagc 485 |||||||||||||||||||| Sbjct: 58994 actgctgctgctgttggagc 59013
>gb|AC023751.3| Drosophila melanogaster 3L BAC RP98-31C17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187437 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 tgctgctgctgttggagctg 487 |||||||||||||||||||| Sbjct: 65703 tgctgctgctgttggagctg 65684
>gb|AC084864.4| Homo sapiens chromosome 7 clone RP11-738B7, complete sequence Length = 176562 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 459 ctgccagactgctgctgctgttgg 482 ||||||| |||||||||||||||| Sbjct: 32943 ctgccaggctgctgctgctgttgg 32920
>ref|NM_168102.1| Drosophila melanogaster Guanine nucleotide exchange factor GEF64C CG32239-RA (Gef64C), mRNA Length = 7283 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 tgctgctgctgttggagctg 487 |||||||||||||||||||| Sbjct: 1194 tgctgctgctgttggagctg 1175
>ref|NM_137046.3| Drosophila melanogaster CG6191-RA (CG6191), mRNA Length = 3456 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagct 486 |||||||||||||||||||| Sbjct: 1537 ctgctgctgctgttggagct 1518
>gb|AY064174.1| Drosophila melanogaster rho GTPase guanine nucleotide exchange factor GEF64C (Gef64c) mRNA, complete cds Length = 7304 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 tgctgctgctgttggagctg 487 |||||||||||||||||||| Sbjct: 1202 tgctgctgctgttggagctg 1183
>gb|AC100850.2| Homo sapiens chromosome 8, clone RP11-235P11, complete sequence Length = 72757 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 ctgccagactgctgctgctg 478 |||||||||||||||||||| Sbjct: 33998 ctgccagactgctgctgctg 34017
>gb|AC008005.8| Homo sapiens chromosome 8, clone RP11-44L18, complete sequence Length = 142235 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 ctgccagactgctgctgctg 478 |||||||||||||||||||| Sbjct: 39265 ctgccagactgctgctgctg 39246
>gb|AC104837.2| Homo sapiens chromosome 1 clone RP4-641G12, complete sequence Length = 151265 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 gcaggcactgccagactgct 471 |||||||||||||||||||| Sbjct: 98654 gcaggcactgccagactgct 98673
>ref|XM_681821.1| PREDICTED: Danio rerio similar to delangin isoform A (LOC558592), mRNA Length = 882 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 acacgccagaaataaagcca 145 |||||||||||||||||||| Sbjct: 57 acacgccagaaataaagcca 76
>ref|XM_680012.1| PREDICTED: Danio rerio similar to delangin isoform A (LOC557036), mRNA Length = 4242 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 acacgccagaaataaagcca 145 |||||||||||||||||||| Sbjct: 3417 acacgccagaaataaagcca 3436
>gb|DQ139261.1| Vibro sp. DAT722 inDAT722 integron, complete sequence and flanking sequences Length = 136095 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 tcatggtgaaggcgggagcc 314 |||||||||||||||||||| Sbjct: 127973 tcatggtgaaggcgggagcc 127992
>emb|BX511000.12| Zebrafish DNA sequence from clone DKEY-217F4 in linkage group 2, complete sequence Length = 191671 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 tgcaggcactgccagactgc 470 |||||||||||||||||||| Sbjct: 5290 tgcaggcactgccagactgc 5271
>emb|BX548163.15| Zebrafish DNA sequence from clone CH211-135J7 in linkage group 10, complete sequence Length = 132400 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 acacgccagaaataaagcca 145 |||||||||||||||||||| Sbjct: 29980 acacgccagaaataaagcca 29999
>gb|AC091634.1|AC091634 Drosophila melanogaster, chromosome 2R, region 50A-50B, BAC clone BACR36J03, complete sequence Length = 159065 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagct 486 |||||||||||||||||||| Sbjct: 34233 ctgctgctgctgttggagct 34214
>gb|AC007329.7|AC007329 Drosophila melanogaster, chromosome 2R, region 50B-50C, BAC clone BACR14P04, complete sequence Length = 126140 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 ctgctgctgctgttggagct 486 |||||||||||||||||||| Sbjct: 37409 ctgctgctgctgttggagct 37428
>gb|AC078846.2|AC078846 Homo sapiens chromosome 7 clone RP11-448A19, complete sequence Length = 219428 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 459 ctgccagactgctgctgctgttgg 482 ||||||| |||||||||||||||| Sbjct: 194177 ctgccaggctgctgctgctgttgg 194154
>gb|AC105461.5| Homo sapiens BAC clone RP11-1196K6 from 2, complete sequence Length = 14520 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 gagactcatggaggtagggc 566 |||||||||||||||||||| Sbjct: 11022 gagactcatggaggtagggc 11003
>emb|BX005104.7| Zebrafish DNA sequence from clone DKEY-191D13 in linkage group 6, complete sequence Length = 152217 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagct 486 |||||||||||||||||||| Sbjct: 62388 ctgctgctgctgttggagct 62369
>dbj|AK119740.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-F06, full insert sequence Length = 4317 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 451 tgcaggcactgccagactgctgctgctg 478 |||| ||||||||| ||||||||||||| Sbjct: 429 tgcaagcactgccacactgctgctgctg 402
>emb|BX005221.7| Zebrafish DNA sequence from clone DKEY-63H22 in linkage group 7, complete sequence Length = 100694 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 gtgcaggcactgccagactg 469 |||||||||||||||||||| Sbjct: 29250 gtgcaggcactgccagactg 29231
>emb|BX248523.8| Zebrafish DNA sequence from clone CH211-257G8 in linkage group 20, complete sequence Length = 169849 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 gtgcaggcactgccagactg 469 |||||||||||||||||||| Sbjct: 92844 gtgcaggcactgccagactg 92825
>emb|AL928707.5| Zebrafish DNA sequence from clone CH211-207M2 in linkage group 21, complete sequence Length = 206304 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 tgcaggcactgccagactgc 470 |||||||||||||||||||| Sbjct: 172979 tgcaggcactgccagactgc 172960
>gb|AY109474.1| Zea mays CL982_-1 mRNA sequence Length = 1239 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 541 gatgacgagactcatggaggtagggctt 568 ||||||| ||||||||||| |||||||| Sbjct: 682 gatgacgtgactcatggagatagggctt 655
>gb|AF145634.1|AF145634 Drosophila melanogaster clone GH06193 BcDNA.GH06193 (BcDNA.GH06193) mRNA, complete cds Length = 3420 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 ctgctgctgctgttggagct 486 |||||||||||||||||||| Sbjct: 1503 ctgctgctgctgttggagct 1484
>gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32 of 73 of the complete sequence Length = 291923 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 ctgctgctgctgttggagct 486 |||||||||||||||||||| Sbjct: 289282 ctgctgctgctgttggagct 289301
>gb|AE003482.4| Drosophila melanogaster chromosome 3L, section 16 of 83 of the complete sequence Length = 302417 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 tgctgctgctgttggagctg 487 |||||||||||||||||||| Sbjct: 138713 tgctgctgctgttggagctg 138694
>emb|CR753900.9| Zebrafish DNA sequence from clone CH211-167B13 in linkage group 10, complete sequence Length = 113731 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 acacgccagaaataaagcca 145 |||||||||||||||||||| Sbjct: 89946 acacgccagaaataaagcca 89927
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 cataaaacttttgttccaca 20 |||||||||||||||||||| Sbjct: 69428 cataaaacttttgttccaca 69409
>emb|BX005410.7| Zebrafish DNA sequence from clone CH211-106J24 in linkage group 7, complete sequence Length = 99576 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 gtgcaggcactgccagactg 469 |||||||||||||||||||| Sbjct: 5364 gtgcaggcactgccagactg 5345
>emb|CR762427.15| Zebrafish DNA sequence from clone DKEY-253I9 in linkage group 1, complete sequence Length = 209003 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 aagtggccagagaagctgacatgg 248 |||| ||||||||||||||||||| Sbjct: 191918 aagtagccagagaagctgacatgg 191941
>gb|AC136008.5| Mus musculus BAC clone RP24-68J1 from 6, complete sequence Length = 181220 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 agaaataaagccaaggatga 152 |||||||||||||||||||| Sbjct: 71220 agaaataaagccaaggatga 71201
>gb|AC131670.5| Mus musculus BAC clone RP23-307I19 from 5, complete sequence Length = 197080 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 tgaacataaagcccagaatt 67 |||||||||||||||||||| Sbjct: 194934 tgaacataaagcccagaatt 194953
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 actgctgctgctgttggagc 485 |||||||||||||||||||| Sbjct: 593701 actgctgctgctgttggagc 593720
>emb|CR759894.19| Zebrafish DNA sequence from clone DKEYP-84G6 in linkage group 10, complete sequence Length = 188280 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 tgcaggcactgccagactgc 470 |||||||||||||||||||| Sbjct: 120588 tgcaggcactgccagactgc 120569
>emb|AL626808.28| Mouse DNA sequence from clone RP23-383I7 on chromosome 4, complete sequence Length = 203992 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 458 actgccagactgctgctgctgttg 481 |||||| ||||||||||||||||| Sbjct: 66780 actgcccgactgctgctgctgttg 66757 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,544,562 Number of Sequences: 3902068 Number of extensions: 5544562 Number of successful extensions: 140942 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 140411 Number of HSP's gapped (non-prelim): 525 length of query: 624 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 601 effective length of database: 17,143,297,704 effective search space: 10303121920104 effective search space used: 10303121920104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)