| Clone Name | rbaal7a18 |
|---|---|
| Clone Library Name | barley_pub |
>DADA_KLEAE (O30745) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 33.1 bits (74), Expect = 0.18 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = -2 Query: 294 VSETKSDAAAVDSQPGAAPNESPSAVNNGQLSPG 193 +S+ D +D QPG P E SA N GQ+SPG Sbjct: 19 LSQAGHDVTVIDRQPG--PAEETSAANAGQISPG 50
>ATG1_EMENI (Q5BCU8) Serine/threonine-protein kinase atg1 (EC 2.7.11.1)| (Autophagy-related protein 1) Length = 935 Score = 29.3 bits (64), Expect = 2.7 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%) Frame = -1 Query: 169 KQLPPSXVPPSPRTIQHSHC--NQSVSGKH 86 KQ+PP+ PP P + H+ Q + G+H Sbjct: 419 KQIPPAAAPPRPEAVSHATAPGRQELIGRH 448
>HME1_MOUSE (P09065) Homeobox protein engrailed-1 (Mo-En-1)| Length = 401 Score = 25.0 bits (53), Expect(2) = 7.7 Identities = 9/23 (39%), Positives = 12/23 (52%) Frame = -3 Query: 290 LKPNQMPPQ*TANPVRPPMSRHP 222 + P PP A P PP++ HP Sbjct: 48 VSPQPAPPSPPAAPCLPPLAHHP 70 Score = 21.2 bits (43), Expect(2) = 7.7 Identities = 9/19 (47%), Positives = 9/19 (47%) Frame = -1 Query: 175 HLKQLPPSXVPPSPRTIQH 119 HL PP PP P QH Sbjct: 71 HLPPHPPPPPPPPPPPPQH 89
>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit| (Voltage-gated calcium channel alpha subunit Cav3.3) (Ca(v)3.3) Length = 2223 Score = 27.7 bits (60), Expect = 7.7 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = +3 Query: 135 GDGGTXEGGSCFRCTSP 185 G GG EGG C RC SP Sbjct: 1780 GGGGDTEGGLCRRCYSP 1796
>DIP2A_HUMAN (Q14689) Disco-interacting protein 2 homolog A| Length = 1571 Score = 27.7 bits (60), Expect = 7.7 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -2 Query: 291 SETKSDAAAVDSQPGAAPNESPSAVNNGQLSPGAS 187 S T S A++ S PG P +PSA +PGA+ Sbjct: 174 SSTSSSASSTSSHPGGRPTTAPSAA----ATPGAA 204
>YXWK_CAEEL (Q21184) Putative cuticle collagen F55C10.3| Length = 266 Score = 27.7 bits (60), Expect = 7.7 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -2 Query: 261 DSQPGAAPNESPSAVNNGQLSPGA 190 D QPGA N+ PS N +PGA Sbjct: 144 DGQPGAPGNKGPSGPNGNPGAPGA 167
>DADA_SALTY (Q8ZP17) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 27.7 bits (60), Expect = 7.7 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -2 Query: 294 VSETKSDAAAVDSQPGAAPNESPSAVNNGQLSPG 193 +S+ D +D + G P + SA N GQ+SPG Sbjct: 19 LSQAGHDVTVIDRESG--PAQETSAANAGQISPG 50
>DADA_SALTI (Q8Z687) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 27.7 bits (60), Expect = 7.7 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -2 Query: 294 VSETKSDAAAVDSQPGAAPNESPSAVNNGQLSPG 193 +S+ D +D + G P + SA N GQ+SPG Sbjct: 19 LSQAGHDVTVIDRESG--PAQETSAANAGQISPG 50
>VRP1_YEAST (P37370) Verprolin| Length = 817 Score = 27.7 bits (60), Expect = 7.7 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -2 Query: 291 SETKSDAAAVDSQPGAAPNESPSAVNNGQLSPGASXVKCT*SSSLPP 151 S S +A+ PGA P+ + + N LSP A V SSS PP Sbjct: 111 STKPSPSASAPPIPGAVPSVAAPPIPNAPLSP-APAVPSIPSSSAPP 156 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,293,102 Number of Sequences: 219361 Number of extensions: 679385 Number of successful extensions: 2411 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2241 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2411 length of database: 80,573,946 effective HSP length: 75 effective length of database: 64,121,871 effective search space used: 1538924904 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)