>NALP4_HUMAN (Q96MN2) NACHT-, LRR- and PYD-containing protein 4|
           (PYRIN-containing APAF1-like protein 4) (PAAD and
           NACHT-containing protein 2) (PYRIN and NACHT-containing
           protein 2) (Ribonuclease inhibitor 2)
          Length = 994

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 25  SYVHIHIVHLDVCRSFYFLGKGHYVHPHLAL 117
           SYV +H+   + C + ++L K H  HPH A+
Sbjct: 447 SYVFLHVCIQEFCAALFYLLKSHLDHPHPAV 477

>SYA_MYCPE (Q8EUR6) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 930

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = +1

Query: 52  LDVCRSFYFLGKGHYVHPHLALLYRVLFVCPET*EGDLCIEQHLYN---VSSTAATSMPR 222
           LD  +    +G    V+  ++   RVL++CPE+ E  +C   H+YN   +     T +  
Sbjct: 664 LDEAKEMGAIGYFEQVYKKISGKLRVLYLCPESIE--ICGGTHVYNTGDIEDFMVTGLTS 721

Query: 223 TKSNSW 240
             S SW
Sbjct: 722 KGSGSW 727


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,168,718
Number of Sequences: 219361
Number of extensions: 1279202
Number of successful extensions: 3505
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3505
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)