ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal14d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK065414.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 3e-48
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
3dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
4dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
5gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence 60 7e-06
6emb|Z19058.1|GGCEK7A G.gallus Cek7 gene 48 0.025
7ref|NM_205105.1| Gallus gallus EPH receptor A5 (EPHA5), mRNA 48 0.025
8gb|U03910.1|GGCEK7B Gallus gallus receptor-type protein-tyrosine... 48 0.025
9ref|XM_481915.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
10ref|XM_481914.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
11ref|XM_507201.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 1.6
12gb|AF067617.1| Caenorhabditis elegans cosmid T04D1, complete seq... 42 1.6
13emb|AL365500.9| Human DNA sequence from clone RP11-232C13 on chr... 42 1.6
14gb|AC164097.2| Mus musculus BAC clone RP23-141F18 from chromosom... 42 1.6
15ref|NM_059025.2| Caenorhabditis elegans T04D1.4 (helicase) mRNA,... 42 1.6
16gb|AC154705.2| Mus musculus BAC clone RP23-131F11 from chromosom... 42 1.6
17dbj|AK112035.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
18dbj|AK105899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
19dbj|AK070322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
20emb|AL110292.4|CNS018P1 Human chromosome 14 DNA sequence BAC R-3... 42 1.6
21ref|NM_130363.3| Arabidopsis thaliana unknown protein AT2G47960 ... 40 6.2
22gb|AC102396.28| Mus musculus chromosome 3, clone RP24-169F23, co... 40 6.2
23ref|NM_192832.1| Oryza sativa (japonica cultivar-group), predic... 40 6.2
24ref|XM_476518.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
25gb|AC154442.3| Mus musculus BAC clone RP24-178L2 from chromosome... 40 6.2
26gb|AC102429.11| Mus musculus chromosome 18, clone RP24-93K11, co... 40 6.2
27gb|AY058645.1| Drosophila melanogaster LD34489 full insert cDNA 40 6.2
28gb|AY113973.1| Arabidopsis thaliana unknown protein (At2g47960) ... 40 6.2
29gb|AY074352.1| Arabidopsis thaliana unknown protein (At2g47960) ... 40 6.2
30dbj|AK095936.1| Homo sapiens cDNA FLJ38617 fis, clone HEART2007231 40 6.2
31gb|AY274933.1| Pisum sativum Stp-h4 gene, complete cds 40 6.2
32gb|AY274932.1| Pisum sativum Stp-h3 gene, complete cds 40 6.2
33gb|AY274931.1| Pisum sativum Stp-h2 gene, complete cds 40 6.2
34gb|AY274930.1| Pisum sativum Stp-h1 pseudogene, complete sequence 40 6.2
35gb|AC006072.4| Arabidopsis thaliana chromosome 2 clone T9J23 map... 40 6.2
36ref|NM_166690.1| Drosophila melanogaster CG30420-RA, transcript ... 40 6.2
37ref|NM_138130.2| Drosophila melanogaster CG30420-RB, transcript ... 40 6.2
38gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 ma... 40 6.2
39gb|AC098480.2| Homo sapiens chromosome 3 clone RP11-149J4, compl... 40 6.2
40gb|AC011366.6| Homo sapiens chromosome 5 clone CTC-568L21, compl... 40 6.2
41gb|AY060248.1| Drosophila melanogaster GH07217 full length cDNA 40 6.2
42gb|AF428334.1|AF428334 Arabidopsis thaliana At2g47960/T9J23.10 m... 40 6.2
43dbj|AK043198.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 6.2
44dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
45dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
46dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
47emb|BX819916.1|CNS0AA73 Arabidopsis thaliana Full-length cDNA Co... 40 6.2
48gb|AC007884.5|AC007884 Drosophila melanogaster, chromosome 2R, r... 40 6.2
49gb|AY254046.1| Homo sapiens caspase 6, apoptosis-related cystein... 40 6.2
50dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
51dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.2
52gb|AC008417.3|AC008417 Homo sapiens chromosome 5 clone CTC-287O8... 40 6.2
53dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
54dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
55dbj|AP006172.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
56dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
57gb|AC018725.1|AC018725 Homo sapiens chromosome 19, cosmid F22273... 40 6.2
58emb|CT737352.3| Human DNA sequence from clone XX-HCC1954_35H21, ... 40 6.2
59emb|AL355773.4|CNS05TCO Human chromosome 14 DNA sequence BAC R-8... 40 6.2
60emb|AL163952.5|CNS05TBP Human chromosome 14 DNA sequence BAC R-1... 40 6.2
61gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72... 40 6.2
62gb|AC006213.1|AC006213 Homo sapiens, clone hRPK.15_A_1, complete... 40 6.2
63gb|AE015924.1| Porphyromonas gingivalis W83, complete genome 40 6.2
64dbj|AP004301.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
65gb|AC004067.1|AC004067 Homo sapiens chromosome 4 clone B366O24 m... 40 6.2
66emb|CT033749.8| Mouse DNA sequence from clone RP23-14N10 on chro... 40 6.2
67emb|AL672284.15| Mouse DNA sequence from clone RP23-39I7 on chro... 40 6.2 
>dbj|AK065414.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022J10, full
            insert sequence
          Length = 1348

 Score =  200 bits (101), Expect = 3e-48
 Identities = 272/325 (83%), Gaps = 3/325 (0%)
 Strand = Plus / Minus

                                                                        
Query: 115  ctgttatatcgtgttctttttgtttgcccggaaacatgagaaggcgatctctgtattgag 174
            |||||| ||| |||||||||| ||||||||||| ||||| |||  |||||||||||||||
Sbjct: 1113 ctgttaaatcatgttctttttctttgcccggaa-catgaaaagctgatctctgtattgag 1055

                                                                        
Query: 175  cagcatctttataacgtatcctcaacagcagcaacaagcatgccgcgcaccaaatcaaac 234
            |||||||||| || ||| |||||||||||||| || |||||   ||| ||||||||||||
Sbjct: 1054 cagcatctttgtagcgt-tcctcaacagcagcgaccagcatattgcggaccaaatcaaac 996

                                                                        
Query: 235  tcctgggcttcaaagcaaggctggtcgccgggcttgtccagtctcgcgtaatggatttgg 294
            || ||||| ||||||||||| || ||| | ||| |||| ||||| | ||| |||| ||||
Sbjct: 995  tcttgggcctcaaagcaaggttgatcgtcaggcctgtcaagtcttgtgtattggaattgg 936

                                                                        
Query: 295  tcagagttcacgtagctcccagttggctttggctgtatcactttcagaccgttgttgtat 354
            || ||| | || |||||| ||| |||  |||| ||||  |||||||  || ||||| || 
Sbjct: 935  tctgagcttacatagctctcagatggtgttggttgtacaactttcaatccattgttatac 876

                                                                        
Query: 355  gcaatgcgcttattgacttgtataggaaccttgcaccggcaaagcaatgctgatggcatc 414
            || || ||| |||| ||||||||||||||||| |||||| ||||||||| ||||||||||
Sbjct: 875  gctatacgcctattcacttgtataggaaccttacaccgg-aaagcaatgttgatggcatc 817

                                     
Query: 415  tgatggcttgagatcaaaactaata 439
            ||||||||||||||| || ||||||
Sbjct: 816  tgatggcttgagatctaagctaata 792
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 53/58 (91%), Gaps = 1/58 (1%)
 Strand = Plus / Plus

                                                                          
Query: 382      accttgcaccggcaaagcaatgctgatggcatctgatggcttgagatcaaaactaata 439
                ||||| |||||| ||||||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 29067443 accttacaccgg-aaagcaatgttgatggcatctgatggcttgagatctaagctaata 29067499



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 69/80 (86%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                            
Query: 175      cagcatctttataacgtatcctcaacagcagcaacaagcatgccgcgcaccaaatcaaac 234
                |||||||||| || ||| |||||||||||||| || |||||   ||| ||||||||||||
Sbjct: 29066714 cagcatctttgtagcgt-tcctcaacagcagcgaccagcatattgcggaccaaatcaaac 29066772

                                    
Query: 235      tcctgggcttcaaagcaagg 254
                || ||||| |||||||||||
Sbjct: 29066773 tcttgggcctcaaagcaagg 29066792



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 54/61 (88%), Gaps = 1/61 (1%)
 Strand = Plus / Plus

                                                                            
Query: 115      ctgttatatcgtgttctttttgtttgcccggaaacatgagaaggcgatctctgtattgag 174
                |||||| ||| |||||||||| ||||||||| ||||||| |||  |||||||||||||||
Sbjct: 29066393 ctgttaaatcatgttctttttctttgcccgg-aacatgaaaagctgatctctgtattgag 29066451

                 
Query: 175      c 175
                |
Sbjct: 29066452 c 29066452



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 39       tcacatcgtgcatcttgatg 58
                ||||||||||||||||||||
Sbjct: 24699756 tcacatcgtgcatcttgatg 24699775
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>dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0047E11
          Length = 148109

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 53/58 (91%), Gaps = 1/58 (1%)
 Strand = Plus / Plus

                                                                        
Query: 382    accttgcaccggcaaagcaatgctgatggcatctgatggcttgagatcaaaactaata 439
              ||||| |||||| ||||||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 111801 accttacaccgg-aaagcaatgttgatggcatctgatggcttgagatctaagctaata 111857



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 69/80 (86%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                          
Query: 175    cagcatctttataacgtatcctcaacagcagcaacaagcatgccgcgcaccaaatcaaac 234
              |||||||||| || ||| |||||||||||||| || |||||   ||| ||||||||||||
Sbjct: 111072 cagcatctttgtagcgt-tcctcaacagcagcgaccagcatattgcggaccaaatcaaac 111130

                                  
Query: 235    tcctgggcttcaaagcaagg 254
              || ||||| |||||||||||
Sbjct: 111131 tcttgggcctcaaagcaagg 111150



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 54/61 (88%), Gaps = 1/61 (1%)
 Strand = Plus / Plus

                                                                          
Query: 115    ctgttatatcgtgttctttttgtttgcccggaaacatgagaaggcgatctctgtattgag 174
              |||||| ||| |||||||||| ||||||||| ||||||| |||  |||||||||||||||
Sbjct: 110751 ctgttaaatcatgttctttttctttgcccgg-aacatgaaaagctgatctctgtattgag 110809

               
Query: 175    c 175
              |
Sbjct: 110810 c 110810
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>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0421H07
          Length = 158126

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 53/58 (91%), Gaps = 1/58 (1%)
 Strand = Plus / Plus

                                                                       
Query: 382   accttgcaccggcaaagcaatgctgatggcatctgatggcttgagatcaaaactaata 439
             ||||| |||||| ||||||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 27809 accttacaccgg-aaagcaatgttgatggcatctgatggcttgagatctaagctaata 27865



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 69/80 (86%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                         
Query: 175   cagcatctttataacgtatcctcaacagcagcaacaagcatgccgcgcaccaaatcaaac 234
             |||||||||| || ||| |||||||||||||| || |||||   ||| ||||||||||||
Sbjct: 27080 cagcatctttgtagcgt-tcctcaacagcagcgaccagcatattgcggaccaaatcaaac 27138

                                 
Query: 235   tcctgggcttcaaagcaagg 254
             || ||||| |||||||||||
Sbjct: 27139 tcttgggcctcaaagcaagg 27158



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 54/61 (88%), Gaps = 1/61 (1%)
 Strand = Plus / Plus

                                                                         
Query: 115   ctgttatatcgtgttctttttgtttgcccggaaacatgagaaggcgatctctgtattgag 174
             |||||| ||| |||||||||| ||||||||| ||||||| |||  |||||||||||||||
Sbjct: 26759 ctgttaaatcatgttctttttctttgcccgg-aacatgaaaagctgatctctgtattgag 26817

              
Query: 175   c 175
             |
Sbjct: 26818 c 26818
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>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence
          Length = 204120

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 52/58 (89%), Gaps = 1/58 (1%)
 Strand = Plus / Plus

                                                                       
Query: 382   accttgcaccggcaaagcaatgctgatggcatctgatggcttgagatcaaaactaata 439
             |||||||| ||| ||||||||| |||| ||||| ||||||||||| ||||||||||||
Sbjct: 86510 accttgcaacgg-aaagcaatgttgatagcatccgatggcttgaggtcaaaactaata 86566
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>emb|Z19058.1|GGCEK7A G.gallus Cek7 gene
          Length = 2396

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 64  cgaagcttctatttccttggcaaa 87
           ||||||||||||||||||||||||
Sbjct: 415 cgaagcttctatttccttggcaaa 392
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>ref|NM_205105.1| Gallus gallus EPH receptor A5 (EPHA5), mRNA
          Length = 4124

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 64   cgaagcttctatttccttggcaaa 87
            ||||||||||||||||||||||||
Sbjct: 2031 cgaagcttctatttccttggcaaa 2008
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>gb|U03910.1|GGCEK7B Gallus gallus receptor-type protein-tyrosine kinase precursor (Cek7)
            mRNA, complete cds
          Length = 4124

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 64   cgaagcttctatttccttggcaaa 87
            ||||||||||||||||||||||||
Sbjct: 2031 cgaagcttctatttccttggcaaa 2008
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>ref|XM_481915.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1119

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 369 gacttgtataggaaccttgca 389
           |||||||||||||||||||||
Sbjct: 693 gacttgtataggaaccttgca 673
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>ref|XM_481914.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1460

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 369 gacttgtataggaaccttgca 389
           |||||||||||||||||||||
Sbjct: 988 gacttgtataggaaccttgca 968
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>ref|XM_507201.1| PREDICTED Oryza sativa (japonica cultivar-group), P0426E02.15-2
           mRNA
          Length = 1525

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 369 gacttgtataggaaccttgca 389
           |||||||||||||||||||||
Sbjct: 968 gacttgtataggaaccttgca 948
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>gb|AF067617.1| Caenorhabditis elegans cosmid T04D1, complete sequence
          Length = 28678

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 191   tatcctcaacagcagcaacaa 211
             |||||||||||||||||||||
Sbjct: 26083 tatcctcaacagcagcaacaa 26063
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>emb|AL365500.9| Human DNA sequence from clone RP11-232C13 on chromosome 10 Contains the
             5' end of a novel gene, complete sequence
          Length = 153558

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 226   aaatcaaactcctgggcttca 246
             |||||||||||||||||||||
Sbjct: 33374 aaatcaaactcctgggcttca 33354
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>gb|AC164097.2| Mus musculus BAC clone RP23-141F18 from chromosome 16, complete sequence
          Length = 217725

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 37     attcacatcgtgcatcttgatgttt 61
              |||||||| ||||||||||||||||
Sbjct: 183194 attcacatagtgcatcttgatgttt 183170
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>ref|NM_059025.2| Caenorhabditis elegans T04D1.4 (helicase) mRNA, complete cds
          Length = 9397

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 191  tatcctcaacagcagcaacaa 211
            |||||||||||||||||||||
Sbjct: 1555 tatcctcaacagcagcaacaa 1575
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>gb|AC154705.2| Mus musculus BAC clone RP23-131F11 from chromosome 16, complete sequence
          Length = 177886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 37     attcacatcgtgcatcttgatgttt 61
              |||||||| ||||||||||||||||
Sbjct: 144886 attcacatagtgcatcttgatgttt 144910
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>dbj|AK112035.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G04, full
           insert sequence
          Length = 1119

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 369 gacttgtataggaaccttgca 389
           |||||||||||||||||||||
Sbjct: 693 gacttgtataggaaccttgca 673
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>dbj|AK105899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F07, full
           insert sequence
          Length = 1460

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 369 gacttgtataggaaccttgca 389
           |||||||||||||||||||||
Sbjct: 988 gacttgtataggaaccttgca 968
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>dbj|AK070322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052C20, full
           insert sequence
          Length = 1525

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 369 gacttgtataggaaccttgca 389
           |||||||||||||||||||||
Sbjct: 968 gacttgtataggaaccttgca 948
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>emb|AL110292.4|CNS018P1 Human chromosome 14 DNA sequence BAC R-384J4 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 177427

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 229    tcaaactcctgggcttcaaag 249
              |||||||||||||||||||||
Sbjct: 122902 tcaaactcctgggcttcaaag 122882
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>ref|NM_130363.3| Arabidopsis thaliana unknown protein AT2G47960 mRNA, complete cds
          Length = 1587

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 132 ttttgtttgcccggaaacat 151
           ||||||||||||||||||||
Sbjct: 893 ttttgtttgcccggaaacat 874
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>gb|AC102396.28| Mus musculus chromosome 3, clone RP24-169F23, complete sequence
          Length = 137155

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 128   ttctttttgtttgcccggaaacat 151
             |||||| |||||||||||||||||
Sbjct: 70853 ttctttatgtttgcccggaaacat 70876
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>ref|NM_192832.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 525

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 39  tcacatcgtgcatcttgatg 58
           ||||||||||||||||||||
Sbjct: 472 tcacatcgtgcatcttgatg 453
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>ref|XM_476518.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2283

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 324 tggctgtatcactttcagac 343
           ||||||||||||||||||||
Sbjct: 77  tggctgtatcactttcagac 96
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>gb|AC154442.3| Mus musculus BAC clone RP24-178L2 from chromosome 17, complete sequence
          Length = 177231

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     gcttctatttccttggcaaa 87
              ||||||||||||||||||||
Sbjct: 148627 gcttctatttccttggcaaa 148646
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>gb|AC102429.11| Mus musculus chromosome 18, clone RP24-93K11, complete sequence
          Length = 216331

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   cccagttggctttggctgta 331
             ||||||||||||||||||||
Sbjct: 50683 cccagttggctttggctgta 50664
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>gb|AY058645.1| Drosophila melanogaster LD34489 full insert cDNA
          Length = 3313

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 91   cactatgtacacccccatct 110
            ||||||||||||||||||||
Sbjct: 2081 cactatgtacacccccatct 2062
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>gb|AY113973.1| Arabidopsis thaliana unknown protein (At2g47960) mRNA, complete cds
          Length = 1360

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 132 ttttgtttgcccggaaacat 151
           ||||||||||||||||||||
Sbjct: 876 ttttgtttgcccggaaacat 857
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>gb|AY074352.1| Arabidopsis thaliana unknown protein (At2g47960) mRNA, complete cds
          Length = 1594

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 132 ttttgtttgcccggaaacat 151
           ||||||||||||||||||||
Sbjct: 888 ttttgtttgcccggaaacat 869
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>dbj|AK095936.1| Homo sapiens cDNA FLJ38617 fis, clone HEART2007231
          Length = 2183

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 224  ccaaatcaaactcctgggct 243
            ||||||||||||||||||||
Sbjct: 1423 ccaaatcaaactcctgggct 1442
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>gb|AY274933.1| Pisum sativum Stp-h4 gene, complete cds
          Length = 1681

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  ctcaacagcagcaacaagca 214
            ||||||||||||||||||||
Sbjct: 1236 ctcaacagcagcaacaagca 1217
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>gb|AY274932.1| Pisum sativum Stp-h3 gene, complete cds
          Length = 1677

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  ctcaacagcagcaacaagca 214
            ||||||||||||||||||||
Sbjct: 1232 ctcaacagcagcaacaagca 1213
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>gb|AY274931.1| Pisum sativum Stp-h2 gene, complete cds
          Length = 1677

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  ctcaacagcagcaacaagca 214
            ||||||||||||||||||||
Sbjct: 1232 ctcaacagcagcaacaagca 1213
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>gb|AY274930.1| Pisum sativum Stp-h1 pseudogene, complete sequence
          Length = 1683

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  ctcaacagcagcaacaagca 214
            ||||||||||||||||||||
Sbjct: 1238 ctcaacagcagcaacaagca 1219
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>gb|AC006072.4| Arabidopsis thaliana chromosome 2 clone T9J23 map CIC06C03, complete
             sequence
          Length = 81565

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   ttttgtttgcccggaaacat 151
             ||||||||||||||||||||
Sbjct: 30709 ttttgtttgcccggaaacat 30690
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>ref|NM_166690.1| Drosophila melanogaster CG30420-RA, transcript variant A (Atf-2),
            mRNA
          Length = 3274

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 91   cactatgtacacccccatct 110
            ||||||||||||||||||||
Sbjct: 2081 cactatgtacacccccatct 2062
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>ref|NM_138130.2| Drosophila melanogaster CG30420-RB, transcript variant B (Atf-2),
            mRNA
          Length = 2685

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 91   cactatgtacacccccatct 110
            ||||||||||||||||||||
Sbjct: 1492 cactatgtacacccccatct 1473
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>gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 map CIC06C03, complete
             sequence
          Length = 106355

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   ttttgtttgcccggaaacat 151
             ||||||||||||||||||||
Sbjct: 95024 ttttgtttgcccggaaacat 95005
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>gb|AC098480.2| Homo sapiens chromosome 3 clone RP11-149J4, complete sequence
          Length = 188681

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 3     aatattaaaagttacagtcattag 26
             |||| |||||||||||||||||||
Sbjct: 46372 aataataaaagttacagtcattag 46349
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>gb|AC011366.6| Homo sapiens chromosome 5 clone CTC-568L21, complete sequence
          Length = 177954

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    gtattgagcagcatctttat 186
              ||||||||||||||||||||
Sbjct: 175219 gtattgagcagcatctttat 175200
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>gb|AY060248.1| Drosophila melanogaster GH07217 full length cDNA
          Length = 4583

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 91   cactatgtacacccccatct 110
            ||||||||||||||||||||
Sbjct: 2383 cactatgtacacccccatct 2364
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>gb|AF428334.1|AF428334 Arabidopsis thaliana At2g47960/T9J23.10 mRNA, complete cds
          Length = 1572

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 132 ttttgtttgcccggaaacat 151
           ||||||||||||||||||||
Sbjct: 893 ttttgtttgcccggaaacat 874
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>dbj|AK043198.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730068K10
           product:unclassifiable, full insert sequence
          Length = 1865

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 128 ttctttttgtttgcccggaaacat 151
           |||||| |||||||||||||||||
Sbjct: 137 ttctttatgtttgcccggaaacat 160
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    atcgtgttctttttgtttgc 141
              ||||||||||||||||||||
Sbjct: 475922 atcgtgttctttttgtttgc 475941
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 324     tggctgtatcactttcagac 343
               ||||||||||||||||||||
Sbjct: 1648320 tggctgtatcactttcagac 1648301
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 122      atcgtgttctttttgtttgc 141
                ||||||||||||||||||||
Sbjct: 14432368 atcgtgttctttttgtttgc 14432387
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>emb|BX819916.1|CNS0AA73 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS48ZB04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1572

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 132 ttttgtttgcccggaaacat 151
           ||||||||||||||||||||
Sbjct: 879 ttttgtttgcccggaaacat 860
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>gb|AC007884.5|AC007884 Drosophila melanogaster, chromosome 2R, region 60F-60F, BAC clone
             BACR08I14, complete sequence
          Length = 190616

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    cactatgtacacccccatct 110
             ||||||||||||||||||||
Sbjct: 39332 cactatgtacacccccatct 39313
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>gb|AY254046.1| Homo sapiens caspase 6, apoptosis-related cysteine protease (CASP6)
             gene, complete cds
          Length = 17719

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   ccaaatcaaactcctgggct 243
             ||||||||||||||||||||
Sbjct: 16656 ccaaatcaaactcctgggct 16637
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>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1040D09
          Length = 148102

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     tcacatcgtgcatcttgatg 58
              ||||||||||||||||||||
Sbjct: 125719 tcacatcgtgcatcttgatg 125738
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 253     ggctggtcgccgggcttgtc 272
               ||||||||||||||||||||
Sbjct: 5201862 ggctggtcgccgggcttgtc 5201881
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>gb|AC008417.3|AC008417 Homo sapiens chromosome 5 clone CTC-287O8, complete sequence
          Length = 216067

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    gtattgagcagcatctttat 186
              ||||||||||||||||||||
Sbjct: 174857 gtattgagcagcatctttat 174876
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>dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0407B12
          Length = 148762

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    tcacatcgtgcatcttgatg 58
             ||||||||||||||||||||
Sbjct: 68333 tcacatcgtgcatcttgatg 68352
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>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0021M10
          Length = 163416

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   atcgtgttctttttgtttgc 141
             ||||||||||||||||||||
Sbjct: 25542 atcgtgttctttttgtttgc 25561
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>dbj|AP006172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0088O14
          Length = 179483

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 324    tggctgtatcactttcagac 343
              ||||||||||||||||||||
Sbjct: 116975 tggctgtatcactttcagac 116956
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>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0007D08
          Length = 183142

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   atcgtgttctttttgtttgc 141
             ||||||||||||||||||||
Sbjct: 65882 atcgtgttctttttgtttgc 65901
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>gb|AC018725.1|AC018725 Homo sapiens chromosome 19, cosmid F22273, complete sequence
          Length = 38015

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   aatcaaactcctgggcttca 246
             ||||||||||||||||||||
Sbjct: 28333 aatcaaactcctgggcttca 28352
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>emb|CT737352.3| Human DNA sequence from clone XX-HCC1954_35H21, complete sequence
          Length = 158492

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   gtattgagcagcatctttat 186
             ||||||||||||||||||||
Sbjct: 24481 gtattgagcagcatctttat 24500
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>emb|AL355773.4|CNS05TCO Human chromosome 14 DNA sequence BAC R-813I20 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 216647

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 236  cctgggcttcaaagcaaggc 255
            ||||||||||||||||||||
Sbjct: 7587 cctgggcttcaaagcaaggc 7606
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>emb|AL163952.5|CNS05TBP Human chromosome 14 DNA sequence BAC R-1012E15 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196514

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 236    cctgggcttcaaagcaaggc 255
              ||||||||||||||||||||
Sbjct: 194330 cctgggcttcaaagcaaggc 194349
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>gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72 of 73 of the complete
              sequence
          Length = 343833

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     cactatgtacacccccatct 110
              ||||||||||||||||||||
Sbjct: 191636 cactatgtacacccccatct 191617
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>gb|AC006213.1|AC006213 Homo sapiens, clone hRPK.15_A_1, complete sequence
          Length = 160754

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 227  aatcaaactcctgggcttca 246
            ||||||||||||||||||||
Sbjct: 8809 aatcaaactcctgggcttca 8790
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>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome
          Length = 2343476

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 67      agcttctatttccttggcaa 86
               ||||||||||||||||||||
Sbjct: 1016680 agcttctatttccttggcaa 1016661
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>dbj|AP004301.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0483E09
          Length = 69300

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   tggctgtatcactttcagac 343
             ||||||||||||||||||||
Sbjct: 57473 tggctgtatcactttcagac 57454
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>gb|AC004067.1|AC004067 Homo sapiens chromosome 4 clone B366O24 map 4q25, complete sequence
          Length = 161326

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    ccaaatcaaactcctgggct 243
              ||||||||||||||||||||
Sbjct: 115482 ccaaatcaaactcctgggct 115501
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>emb|CT033749.8| Mouse DNA sequence from clone RP23-14N10 on chromosome 17, complete
             sequence
          Length = 212052

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    gcttctatttccttggcaaa 87
             ||||||||||||||||||||
Sbjct: 90471 gcttctatttccttggcaaa 90490
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>emb|AL672284.15| Mouse DNA sequence from clone RP23-39I7 on chromosome X, complete
             sequence
          Length = 227918

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   atcctcaacagcagcaacaa 211
             ||||||||||||||||||||
Sbjct: 19960 atcctcaacagcagcaacaa 19941


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,823,094
Number of Sequences: 3902068
Number of extensions: 4823094
Number of successful extensions: 137823
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137531
Number of HSP's gapped (non-prelim): 286
length of query: 457
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 435
effective length of database: 17,147,199,772
effective search space: 7459031900820
effective search space used: 7459031900820
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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