| Clone Name | rbaal7a16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | PURL_CORGL (Q8NMI5) Phosphoribosylformylglycinamidine synthase I... | 31 | 2.7 | 2 | PURL_COREF (Q8FMM3) Phosphoribosylformylglycinamidine synthase I... | 31 | 3.5 | 3 | MUA1_XENLA (P10667) Integumentary mucin A.1 precursor (FIM-A.1) ... | 30 | 6.0 | 4 | CT096_HUMAN (Q9NUD7) Protein C20orf96 | 30 | 6.0 | 5 | DZIP3_MOUSE (Q7TPV2) Ubiquitin ligase protein DZIP3 (EC 6.3.2.-)... | 30 | 7.9 |
|---|
>PURL_CORGL (Q8NMI5) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 762 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Frame = +2 Query: 485 TVSSIGERTHERDNHGYAHSGHIFIKLTSSYLE--PVLNKASTLPHNR 622 T + IGE T E+D + H+G + I S ++ PV N+ P N+ Sbjct: 354 TCAEIGEVTDEKDRYVVVHNGEVVIDAPPSTIDEGPVYNRPVARPENQ 401
>PURL_COREF (Q8FMM3) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 763 Score = 30.8 bits (68), Expect = 3.5 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = +2 Query: 485 TVSSIGERTHERDNHGYAHSGHIFIKLTSSYLE--PVLNKASTLPHNR 622 TV+ IGE T E+D + H+G I +S ++ PV N+ P N+ Sbjct: 354 TVAEIGEVTDEKDRYLVVHNGQTVIDAPASTIDEGPVYNRPVERPANQ 401
>MUA1_XENLA (P10667) Integumentary mucin A.1 precursor (FIM-A.1)| (Preprospasmolysin) Length = 400 Score = 30.0 bits (66), Expect = 6.0 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +3 Query: 432 TDDQKNDPEHLPTSDITPPCPRSEKELTKETITATHT 542 T + +P PT+D TPP E T ET T T T Sbjct: 247 TPETTTEPTTTPTTDTTPPTLPPTPETTTETTTETTT 283
>CT096_HUMAN (Q9NUD7) Protein C20orf96| Length = 363 Score = 30.0 bits (66), Expect = 6.0 Identities = 16/65 (24%), Positives = 26/65 (40%) Frame = +3 Query: 138 RPGTHPRSXXXXXXQLQMNNQRARVK*PLHVPATGVVVICEPQGTQQSHFQRYQD*QSLM 317 +P T P RV+ H T VV C+P+ ++ H +R D + Sbjct: 36 KPSTLPPVQQANSLHTSKMKTLTRVQPVFHFKPTTVVTSCQPKNPRELHRRRKLDPGKMH 95 Query: 318 GEVWL 332 ++WL Sbjct: 96 AKIWL 100
>DZIP3_MOUSE (Q7TPV2) Ubiquitin ligase protein DZIP3 (EC 6.3.2.-)| (DAZ-interacting protein 3 homolog) Length = 1204 Score = 29.6 bits (65), Expect = 7.9 Identities = 11/29 (37%), Positives = 23/29 (79%) Frame = +3 Query: 15 AQATSESISTLHNLKSKSRVRLRTKTNEK 101 +++++ES+ L +KSK++ + RTK+N+K Sbjct: 643 SESSTESVKDLQEVKSKTKKKKRTKSNKK 671 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,949,711 Number of Sequences: 219361 Number of extensions: 1601018 Number of successful extensions: 3386 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3312 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3385 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)