ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal13m24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK100508.1| Oryza sativa (japonica cultivar-group) cDNA clon... 345 1e-91
2gb|AY105447.1| Zea mays PCO139673 mRNA sequence 246 9e-62
3gb|AY111372.1| Zea mays CL11075_2 mRNA sequence 141 4e-30
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 94 8e-16
5dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic D... 94 8e-16
6emb|BX828881.1|CNS0A2QV Arabidopsis thaliana Full-length cDNA Co... 68 5e-08
7gb|BT020434.1| Arabidopsis thaliana At4g28070 mRNA, complete cds 58 4e-05
8ref|NM_001036660.1| Arabidopsis thaliana ATPase AT4G28070 transc... 58 4e-05
9ref|NM_118946.2| Arabidopsis thaliana ATPase AT4G28070 transcrip... 58 4e-05
10gb|BT015879.1| Arabidopsis thaliana At4g28070 gene, complete cds 58 4e-05
11emb|BX827763.1|CNS0A2A3 Arabidopsis thaliana Full-length cDNA Co... 58 4e-05
12ref|NM_016099.2| Homo sapiens golgi autoantigen, golgin subfamil... 44 0.66
13ref|NM_001002296.1| Homo sapiens golgi autoantigen, golgin subfa... 44 0.66
14gb|BC001227.2| Homo sapiens golgi autoantigen, golgin subfamily ... 44 0.66
15ref|XM_844157.1| PREDICTED: Canis familiaris similar to golgi au... 44 0.66
16emb|CR617602.1| full-length cDNA clone CS0DA001YL17 of Neuroblas... 44 0.66
17emb|CR616191.1| full-length cDNA clone CS0DA002YE22 of Neuroblas... 44 0.66
18emb|CR609818.1| full-length cDNA clone CS0DI064YA01 of Placenta ... 44 0.66
19emb|CR606993.1| full-length cDNA clone CS0DI001YL07 of Placenta ... 44 0.66
20emb|CR596558.1| full-length cDNA clone CS0DI026YE24 of Placenta ... 44 0.66
21gb|AC009630.14| Homo sapiens chromosome 8, clone RP11-360L9, com... 44 0.66
22gb|AF125102.1|AF125102 Homo sapiens HSPC041 protein mRNA, comple... 44 0.66
23dbj|AB104615.1| Homo sapiens gcp16 mRNA for Golgi complex-associ... 44 0.66
24dbj|AK026613.1| Homo sapiens cDNA: FLJ22960 fis, clone KAT10193,... 44 0.66
25emb|AL136080.6| Human DNA sequence from clone RP11-448E12 on chr... 42 2.6
26emb|AL109760.3|HSJ513G18 Human DNA sequence from clone RP3-513G1... 42 2.6
27emb|BX248505.8| Zebrafish DNA sequence from clone CH211-87L2 in ... 42 2.6
28dbj|AK098221.1| Homo sapiens cDNA FLJ40902 fis, clone UTERU2004061 42 2.6
29emb|BX255919.15| Zebrafish DNA sequence from clone DKEY-259P11 i... 42 2.6

>dbj|AK100508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099M05, full
            insert sequence
          Length = 3645

 Score =  345 bits (174), Expect = 1e-91
 Identities = 432/519 (83%), Gaps = 1/519 (0%)
 Strand = Plus / Minus

                                                                        
Query: 213  gggctgttgccattttgcttcgaagtcctccaagtactctctgctgttgagctctgtcaa 272
            ||||||| || |||| ||||| |||||||||||||||||||| ||||||| |||||||||
Sbjct: 3317 gggctgtcgcaatttcgcttcaaagtcctccaagtactctctactgttgatctctgtcaa 3258

                                                                        
Query: 273  cctgctaatcgtacgatctttggcgaatcctagctcattgtccacacagagatcaggatc 332
            ||| ||||| || ||||| ||||| ||||||||||||||||||||||| |  ||||||||
Sbjct: 3257 cctactaattgttcgatccttggcaaatcctagctcattgtccacacacaagtcaggatc 3198

                                                                        
Query: 333  atcacttttccgcgagcgtgaagatctaggtgaacnnnnnnngtgcttcagcgaccgtca 392
            |||| ||||| |||| |||||||||||||| |||        |||||||||| || ||||
Sbjct: 3197 atcagttttctgcgaccgtgaagatctaggagaa-atttttcgtgcttcagcaactgtca 3139

                                                                        
Query: 393  cgacgttctcgaatagctctatcggctcggcctcggctgtgcataatagcctccccttgt 452
            | |  ||||| ||||| ||||| ||  | || || ||||| ||||||| |||  | ||||
Sbjct: 3138 ctatattctcaaatagttctattggtgcagcgtctgctgtacataataaccttgctttgt 3079

                                                                        
Query: 453  tctcatacattacatcaaccaacgtgacaaaccgatacgctgcagttctgttatgatatc 512
            |||| ||||| ||||||||||| |||||||||||||| ||||| |||| ||| ||| | |
Sbjct: 3078 tctcgtacataacatcaaccaatgtgacaaaccgataagctgctgttcggttctgagacc 3019

                                                                        
Query: 513  caaacttagggacaccttcaactgcaagggtgtgaaacttcttaaatagcccaaaatagt 572
            |||||||||| |  || |||| ||| | |||||||||||| || || ||||||||||| |
Sbjct: 3018 caaacttaggaatgccatcaagtgccaaggtgtgaaactttttgaacagcccaaaataat 2959

                                                                        
Query: 573  ccgctgcgcctataggtttgtcacaaagatcttcaaaccggaaatatgcacatccatttg 632
            | ||||| |||| |||  | |||||||||||||||||  |||||||||||   |||||||
Sbjct: 2958 cagctgcacctaaaggcctatcacaaagatcttcaaatgggaaatatgcaatcccatttg 2899

                                                                        
Query: 633  ctcccagtgggacctgcaaatgccgtcccataacgacttcgactgtttgaggagtaggtt 692
            |||||||||| |||||||| |||||||||||||| ||||| ||||| |||||  ||||||
Sbjct: 2898 ctcccagtggaacctgcaattgccgtcccataacaacttcaactgtctgaggtctaggtt 2839

                                                   
Query: 693  cctcatctccaatcaaagattggaatttctgtttaagaa 731
            ||||||||||||| || | ||| || |||||||||||||
Sbjct: 2838 cctcatctccaattaatgtttgcaacttctgtttaagaa 2800



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>gb|AY105447.1| Zea mays PCO139673 mRNA sequence
          Length = 1259

 Score =  246 bits (124), Expect = 9e-62
 Identities = 406/501 (81%), Gaps = 1/501 (0%)
 Strand = Plus / Minus

                                                                        
Query: 231  ttcgaagtcctccaagtactctctgctgttgagctctgtcaacctgctaatcgtacgatc 290
            ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1087 ttcgaagtcctccaaatattctctgctgttgatctctgtcaacctgctaatcgtacgatc 1028

                                                                        
Query: 291  tttggcgaatcctagctcattgtccacacagagatcaggatcatcacttttccgcgagcg 350
             ||||| ||||| |||||||||||||| || || ||||  || || |||||| | |||||
Sbjct: 1027 cttggcaaatccaagctcattgtccacgcataggtcagtgtcgtcgcttttctgtgagcg 968

                                                                        
Query: 351  tgaagatctaggtgaacnnnnnnngtgcttcagcgaccgtcacgacgttctcgaatagct 410
            ||||||||| ||||||        |||||||||| || |||||||  |||||||| ||  
Sbjct: 967  tgaagatcttggtgaa-accttccgtgcttcagcaacagtcacgatattctcgaacagtc 909

                                                                        
Query: 411  ctatcggctcggcctcggctgtgcataatagcctccccttgttctcatacattacatcaa 470
            |||  ||  | ||||||||||| ||||| |||||  |||||||||| ||||| |||||||
Sbjct: 908  ctactggtccagcctcggctgtacataacagccttgccttgttctcgtacataacatcaa 849

                                                                        
Query: 471  ccaacgtgacaaaccgatacgctgcagttctgttatgatatccaaacttagggacacctt 530
             ||  ||||| |||||||| ||||| |||||||||  | | |||| ||| || | ||| |
Sbjct: 848  tcagtgtgacgaaccgataagctgctgttctgttactagacccaagctttggaataccat 789

                                                                        
Query: 531  caactgcaagggtgtgaaacttcttaaatagcccaaaatagtccgctgcgcctataggtt 590
            ||| ||| ||||||||||| || ||||| || ||||| || || ||||| |||| |||||
Sbjct: 788  caagtgccagggtgtgaaattttttaaagagtccaaagtaatctgctgcacctaaaggtt 729

                                                                        
Query: 591  tgtcacaaagatcttcaaaccggaaatatgcacatccatttgctcccagtgggacctgca 650
            | |||||||| ||||||||  | ||||||||||| ||||||||||| || || ||||| |
Sbjct: 728  tatcacaaaggtcttcaaaaggaaaatatgcacaaccatttgctcctaggggaacctgta 669

                                                                        
Query: 651  aatgccgtcccataacgacttcgactgtttgaggagtaggttcctcatctccaatcaaag 710
            | | || ||||||||  ||||| || ||||| ||  | |||| |||||||||||| ||||
Sbjct: 668  atttccttcccataattacttcaacagtttgtgggctgggtttctcatctccaattaaag 609

                                 
Query: 711  attggaatttctgtttaagaa 731
            | ||||  |||||||| ||||
Sbjct: 608  actggagcttctgtttcagaa 588



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>gb|AY111372.1| Zea mays CL11075_2 mRNA sequence
          Length = 722

 Score =  141 bits (71), Expect = 4e-30
 Identities = 122/138 (88%), Gaps = 2/138 (1%)
 Strand = Plus / Plus

                                                                       
Query: 231 ttcgaagtcctccaagtactctctgctgttg--agctctgtcaacctgctaatcgtacga 288
           ||||||||||||||| || ||||||||||||  | |||||||||||||||||||||||||
Sbjct: 416 ttcgaagtcctccaaatattctctgctgttggaatctctgtcaacctgctaatcgtacga 475

                                                                       
Query: 289 tctttggcgaatcctagctcattgtccacacagagatcaggatcatcacttttccgcgag 348
           || ||||| ||||| ||||||||||||||||| || ||||| || ||||||||| | |||
Sbjct: 476 tccttggcaaatccaagctcattgtccacacataggtcagggtcgtcacttttctgtgag 535

                             
Query: 349 cgtgaagatctaggtgaa 366
           || |||||||| ||||||
Sbjct: 536 cgcgaagatcttggtgaa 553



 Score = 50.1 bits (25), Expect = 0.011
 Identities = 67/81 (82%)
 Strand = Plus / Plus

                                                                       
Query: 422 gcctcggctgtgcataatagcctccccttgttctcatacattacatcaaccaacgtgaca 481
           ||||||||||| ||||| |||||  | ||| |||| ||||| ||||||| ||  ||||| 
Sbjct: 608 gcctcggctgtacataacagccttgctttggtctcgtacataacatcaatcagtgtgacg 667

                                
Query: 482 aaccgatacgctgcagttctg 502
           |||||||| ||||| ||||||
Sbjct: 668 aaccgataagctgctgttctg 688



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                            
Query: 272      acctgctaatcgtacgatctttggcgaatcctagctcattgtccacacagagatcaggat 331
                |||| ||||| || ||||| ||||| ||||||||||||||||||||||| |  |||||||
Sbjct: 10097143 acctactaattgttcgatccttggcaaatcctagctcattgtccacacacaagtcaggat 10097084

                                               
Query: 332      catcacttttccgcgagcgtgaagatctagg 362
                ||||| ||||| |||| ||||||||||||||
Sbjct: 10097083 catcagttttctgcgaccgtgaagatctagg 10097053



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                            
Query: 643      gacctgcaaatgccgtcccataacgacttcgactgtttgaggagtaggttcctcatctcc 702
                ||||||||| |||||||||||||| ||||| ||||| |||||  ||||||||||||||||
Sbjct: 10095962 gacctgcaattgccgtcccataacaacttcaactgtctgaggtctaggttcctcatctcc 10095903

                                             
Query: 703      aatcaaagattggaatttctgtttaagaa 731
                ||| || | ||| || |||||||||||||
Sbjct: 10095902 aattaatgtttgcaacttctgtttaagaa 10095874



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                            
Query: 213      gggctgttgccattttgcttcgaagtcctccaagtactctctgctgttgagctctgtcaa 272
                ||||||| || |||| ||||| |||||||||||||||||||| ||||||| |||||||||
Sbjct: 10097284 gggctgtcgcaatttcgcttcaaagtcctccaagtactctctactgttgatctctgtcaa 10097225

                     
Query: 273      cctgc 277
                |||||
Sbjct: 10097224 cctgc 10097220



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                            
Query: 560      agcccaaaatagtccgctgcgcctataggtttgtcacaaagatcttcaaaccggaaatat 619
                ||||||||||| || ||||| |||| |||  | |||||||||||||||||  ||||||||
Sbjct: 10096134 agcccaaaataatcagctgcacctaaaggcctatcacaaagatcttcaaatgggaaatat 10096075

                                                
Query: 620      gcacatccatttgctcccagtgggacctgcaa 651
                |||   ||||||||||||||||| ||||||||
Sbjct: 10096074 gcaatcccatttgctcccagtggaacctgcaa 10096043



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                            
Query: 462      ttacatcaaccaacgtgacaaaccgatacgctgcagttctgttatgatatccaaacttag 521
                ||||||||||||| |||||||||||||| ||||| |||| ||| ||| | ||||||||||
Sbjct: 10096325 ttacatcaaccaatgtgacaaaccgataagctgctgttcggttctgagacccaaacttag 10096266

                                               
Query: 522      ggacaccttcaactgcaagggtgtgaaactt 552
                | |  || |||| ||| | ||||||||||||
Sbjct: 10096265 gaatgccatcaagtgccaaggtgtgaaactt 10096235



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>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0023I13
          Length = 165911

 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                         
Query: 272   acctgctaatcgtacgatctttggcgaatcctagctcattgtccacacagagatcaggat 331
             |||| ||||| || ||||| ||||| ||||||||||||||||||||||| |  |||||||
Sbjct: 56489 acctactaattgttcgatccttggcaaatcctagctcattgtccacacacaagtcaggat 56430

                                            
Query: 332   catcacttttccgcgagcgtgaagatctagg 362
             ||||| ||||| |||| ||||||||||||||
Sbjct: 56429 catcagttttctgcgaccgtgaagatctagg 56399



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                         
Query: 643   gacctgcaaatgccgtcccataacgacttcgactgtttgaggagtaggttcctcatctcc 702
             ||||||||| |||||||||||||| ||||| ||||| |||||  ||||||||||||||||
Sbjct: 55308 gacctgcaattgccgtcccataacaacttcaactgtctgaggtctaggttcctcatctcc 55249

                                          
Query: 703   aatcaaagattggaatttctgtttaagaa 731
             ||| || | ||| || |||||||||||||
Sbjct: 55248 aattaatgtttgcaacttctgtttaagaa 55220



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                         
Query: 213   gggctgttgccattttgcttcgaagtcctccaagtactctctgctgttgagctctgtcaa 272
             ||||||| || |||| ||||| |||||||||||||||||||| ||||||| |||||||||
Sbjct: 56630 gggctgtcgcaatttcgcttcaaagtcctccaagtactctctactgttgatctctgtcaa 56571

                  
Query: 273   cctgc 277
             |||||
Sbjct: 56570 cctgc 56566



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                         
Query: 560   agcccaaaatagtccgctgcgcctataggtttgtcacaaagatcttcaaaccggaaatat 619
             ||||||||||| || ||||| |||| |||  | |||||||||||||||||  ||||||||
Sbjct: 55480 agcccaaaataatcagctgcacctaaaggcctatcacaaagatcttcaaatgggaaatat 55421

                                             
Query: 620   gcacatccatttgctcccagtgggacctgcaa 651
             |||   ||||||||||||||||| ||||||||
Sbjct: 55420 gcaatcccatttgctcccagtggaacctgcaa 55389



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                         
Query: 462   ttacatcaaccaacgtgacaaaccgatacgctgcagttctgttatgatatccaaacttag 521
             ||||||||||||| |||||||||||||| ||||| |||| ||| ||| | ||||||||||
Sbjct: 55671 ttacatcaaccaatgtgacaaaccgataagctgctgttcggttctgagacccaaacttag 55612

                                            
Query: 522   ggacaccttcaactgcaagggtgtgaaactt 552
             | |  || |||| ||| | ||||||||||||
Sbjct: 55611 gaatgccatcaagtgccaaggtgtgaaactt 55581



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>emb|BX828881.1|CNS0A2QV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL46ZD11 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1628

 Score = 67.9 bits (34), Expect = 5e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                  
Query: 448  cttgttctcatacattacatcaaccaacgtgacaaaccgatacgctgcagttct 501
            ||||||||||||||||||||||||||  |||||||| || || |||||||||||
Sbjct: 1312 cttgttctcatacattacatcaaccagtgtgacaaagcggtaagctgcagttct 1259



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>gb|BT020434.1| Arabidopsis thaliana At4g28070 mRNA, complete cds
          Length = 1422

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                        
Query: 447  ccttgttctcatacattacatcaaccaacgtgacaaaccgatacgctgcagttctgttat 506
            |||||||||||||||||||||||||||  || ||||| || || |||||||| || ||||
Sbjct: 1171 ccttgttctcatacattacatcaaccagtgtcacaaagcggtaagctgcagtcctattat 1112

             
Query: 507  g 507
            |
Sbjct: 1111 g 1111



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>ref|NM_001036660.1| Arabidopsis thaliana ATPase AT4G28070 transcript variant AT4G28070.2
            mRNA, complete cds
          Length = 1422

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                        
Query: 447  ccttgttctcatacattacatcaaccaacgtgacaaaccgatacgctgcagttctgttat 506
            |||||||||||||||||||||||||||  || ||||| || || |||||||| || ||||
Sbjct: 1171 ccttgttctcatacattacatcaaccagtgtcacaaagcggtaagctgcagtcctattat 1112

             
Query: 507  g 507
            |
Sbjct: 1111 g 1111



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>ref|NM_118946.2| Arabidopsis thaliana ATPase AT4G28070 transcript variant AT4G28070.1
            mRNA, complete cds
          Length = 2348

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                        
Query: 447  ccttgttctcatacattacatcaaccaacgtgacaaaccgatacgctgcagttctgttat 506
            |||||||||||||||||||||||||||  || ||||| || || |||||||| || ||||
Sbjct: 1261 ccttgttctcatacattacatcaaccagtgtcacaaagcggtaagctgcagtcctattat 1202

             
Query: 507  g 507
            |
Sbjct: 1201 g 1201



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>gb|BT015879.1| Arabidopsis thaliana At4g28070 gene, complete cds
          Length = 1846

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                        
Query: 447  ccttgttctcatacattacatcaaccaacgtgacaaaccgatacgctgcagttctgttat 506
            |||||||||||||||||||||||||||  || ||||| || || |||||||| || ||||
Sbjct: 1242 ccttgttctcatacattacatcaaccagtgtcacaaagcggtaagctgcagtcctattat 1183

             
Query: 507  g 507
            |
Sbjct: 1182 g 1182



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>emb|BX827763.1|CNS0A2A3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH1ZA05 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1679

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                        
Query: 447  ccttgttctcatacattacatcaaccaacgtgacaaaccgatacgctgcagttctgttat 506
            |||||||||||||||||||||||||||  || ||||| || || |||||||| || ||||
Sbjct: 1263 ccttgttctcatacattacatcaaccagtgtcacaaagcggtaagctgcagtcctattat 1204

             
Query: 507  g 507
            |
Sbjct: 1203 g 1203



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>ref|NM_016099.2| Homo sapiens golgi autoantigen, golgin subfamily a, 7 (GOLGA7),
            transcript variant 1, mRNA
          Length = 1919

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 121  atatttataacaaaactataat 142
            ||||||||||||||||||||||
Sbjct: 1362 atatttataacaaaactataat 1341



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>ref|NM_001002296.1| Homo sapiens golgi autoantigen, golgin subfamily a, 7 (GOLGA7),
            transcript variant 2, mRNA
          Length = 2042

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 121  atatttataacaaaactataat 142
            ||||||||||||||||||||||
Sbjct: 1485 atatttataacaaaactataat 1464



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>gb|BC001227.2| Homo sapiens golgi autoantigen, golgin subfamily a, 7, mRNA (cDNA
            clone MGC:4876 IMAGE:3456384), complete cds
          Length = 1904

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 121  atatttataacaaaactataat 142
            ||||||||||||||||||||||
Sbjct: 1347 atatttataacaaaactataat 1326



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>ref|XM_844157.1| PREDICTED: Canis familiaris similar to golgi autoantigen, golgin
            subfamily a, 7 (LOC607476), mRNA
          Length = 1494

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 121  atatttataacaaaactataat 142
            ||||||||||||||||||||||
Sbjct: 1375 atatttataacaaaactataat 1354



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>emb|CR617602.1| full-length cDNA clone CS0DA001YL17 of Neuroblastoma of Homo sapiens
            (human)
          Length = 1850

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 121  atatttataacaaaactataat 142
            ||||||||||||||||||||||
Sbjct: 1332 atatttataacaaaactataat 1311



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>emb|CR616191.1| full-length cDNA clone CS0DA002YE22 of Neuroblastoma of Homo sapiens
            (human)
          Length = 1911

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 121  atatttataacaaaactataat 142
            ||||||||||||||||||||||
Sbjct: 1389 atatttataacaaaactataat 1368



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>emb|CR609818.1| full-length cDNA clone CS0DI064YA01 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1863

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 121  atatttataacaaaactataat 142
            ||||||||||||||||||||||
Sbjct: 1358 atatttataacaaaactataat 1337



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>emb|CR606993.1| full-length cDNA clone CS0DI001YL07 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1822

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 121  atatttataacaaaactataat 142
            ||||||||||||||||||||||
Sbjct: 1310 atatttataacaaaactataat 1289



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>emb|CR596558.1| full-length cDNA clone CS0DI026YE24 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1821

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 121  atatttataacaaaactataat 142
            ||||||||||||||||||||||
Sbjct: 1310 atatttataacaaaactataat 1289



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>gb|AC009630.14| Homo sapiens chromosome 8, clone RP11-360L9, complete sequence
          Length = 219622

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 121    atatttataacaaaactataat 142
              ||||||||||||||||||||||
Sbjct: 138187 atatttataacaaaactataat 138208



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>gb|AF125102.1|AF125102 Homo sapiens HSPC041 protein mRNA, complete cds
          Length = 1898

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 121  atatttataacaaaactataat 142
            ||||||||||||||||||||||
Sbjct: 1326 atatttataacaaaactataat 1305



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>dbj|AB104615.1| Homo sapiens gcp16 mRNA for Golgi complex-associated protein of
            16kDa, complete cds
          Length = 1949

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 121  atatttataacaaaactataat 142
            ||||||||||||||||||||||
Sbjct: 1342 atatttataacaaaactataat 1321



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>dbj|AK026613.1| Homo sapiens cDNA: FLJ22960 fis, clone KAT10193, highly similar to
            AF125102 Homo sapiens HSPC041 protein mRNA
          Length = 1954

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 121  atatttataacaaaactataat 142
            ||||||||||||||||||||||
Sbjct: 1347 atatttataacaaaactataat 1326



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>emb|AL136080.6| Human DNA sequence from clone RP11-448E12 on chromosome Xq22.1-23
             Contains part of the COL4A6 gene for collagen type IV
             alpha 6, complete sequence
          Length = 116106

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 690   gttcctcatctccaatcaaag 710
             |||||||||||||||||||||
Sbjct: 49082 gttcctcatctccaatcaaag 49102



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>emb|AL109760.3|HSJ513G18 Human DNA sequence from clone RP3-513G18 on chromosome 4, complete
             sequence
          Length = 112560

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 207   gtgcaggggctgttgccattt 227
             |||||||||||||||||||||
Sbjct: 89404 gtgcaggggctgttgccattt 89424



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>emb|BX248505.8| Zebrafish DNA sequence from clone CH211-87L2 in linkage group 14,
              complete sequence
          Length = 189425

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 121    atatttataacaaaactataa 141
              |||||||||||||||||||||
Sbjct: 116869 atatttataacaaaactataa 116889



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>dbj|AK098221.1| Homo sapiens cDNA FLJ40902 fis, clone UTERU2004061
          Length = 2227

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 690  gttcctcatctccaatcaaag 710
            |||||||||||||||||||||
Sbjct: 1247 gttcctcatctccaatcaaag 1267



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>emb|BX255919.15| Zebrafish DNA sequence from clone DKEY-259P11 in linkage group 8,
             complete sequence
          Length = 168607

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 121   atatttataacaaaactataa 141
             |||||||||||||||||||||
Sbjct: 80610 atatttataacaaaactataa 80630


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,032,620
Number of Sequences: 3902068
Number of extensions: 6032620
Number of successful extensions: 117355
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117255
Number of HSP's gapped (non-prelim): 98
length of query: 749
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 726
effective length of database: 17,143,297,704
effective search space: 12446034133104
effective search space used: 12446034133104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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