| Clone Name | rbaal13m24 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK100508.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099M05, full insert sequence Length = 3645 Score = 345 bits (174), Expect = 1e-91 Identities = 432/519 (83%), Gaps = 1/519 (0%) Strand = Plus / Minus Query: 213 gggctgttgccattttgcttcgaagtcctccaagtactctctgctgttgagctctgtcaa 272 ||||||| || |||| ||||| |||||||||||||||||||| ||||||| ||||||||| Sbjct: 3317 gggctgtcgcaatttcgcttcaaagtcctccaagtactctctactgttgatctctgtcaa 3258 Query: 273 cctgctaatcgtacgatctttggcgaatcctagctcattgtccacacagagatcaggatc 332 ||| ||||| || ||||| ||||| ||||||||||||||||||||||| | |||||||| Sbjct: 3257 cctactaattgttcgatccttggcaaatcctagctcattgtccacacacaagtcaggatc 3198 Query: 333 atcacttttccgcgagcgtgaagatctaggtgaacnnnnnnngtgcttcagcgaccgtca 392 |||| ||||| |||| |||||||||||||| ||| |||||||||| || |||| Sbjct: 3197 atcagttttctgcgaccgtgaagatctaggagaa-atttttcgtgcttcagcaactgtca 3139 Query: 393 cgacgttctcgaatagctctatcggctcggcctcggctgtgcataatagcctccccttgt 452 | | ||||| ||||| ||||| || | || || ||||| ||||||| ||| | |||| Sbjct: 3138 ctatattctcaaatagttctattggtgcagcgtctgctgtacataataaccttgctttgt 3079 Query: 453 tctcatacattacatcaaccaacgtgacaaaccgatacgctgcagttctgttatgatatc 512 |||| ||||| ||||||||||| |||||||||||||| ||||| |||| ||| ||| | | Sbjct: 3078 tctcgtacataacatcaaccaatgtgacaaaccgataagctgctgttcggttctgagacc 3019 Query: 513 caaacttagggacaccttcaactgcaagggtgtgaaacttcttaaatagcccaaaatagt 572 |||||||||| | || |||| ||| | |||||||||||| || || ||||||||||| | Sbjct: 3018 caaacttaggaatgccatcaagtgccaaggtgtgaaactttttgaacagcccaaaataat 2959 Query: 573 ccgctgcgcctataggtttgtcacaaagatcttcaaaccggaaatatgcacatccatttg 632 | ||||| |||| ||| | ||||||||||||||||| ||||||||||| ||||||| Sbjct: 2958 cagctgcacctaaaggcctatcacaaagatcttcaaatgggaaatatgcaatcccatttg 2899 Query: 633 ctcccagtgggacctgcaaatgccgtcccataacgacttcgactgtttgaggagtaggtt 692 |||||||||| |||||||| |||||||||||||| ||||| ||||| ||||| |||||| Sbjct: 2898 ctcccagtggaacctgcaattgccgtcccataacaacttcaactgtctgaggtctaggtt 2839 Query: 693 cctcatctccaatcaaagattggaatttctgtttaagaa 731 ||||||||||||| || | ||| || ||||||||||||| Sbjct: 2838 cctcatctccaattaatgtttgcaacttctgtttaagaa 2800
>gb|AY105447.1| Zea mays PCO139673 mRNA sequence Length = 1259 Score = 246 bits (124), Expect = 9e-62 Identities = 406/501 (81%), Gaps = 1/501 (0%) Strand = Plus / Minus Query: 231 ttcgaagtcctccaagtactctctgctgttgagctctgtcaacctgctaatcgtacgatc 290 ||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1087 ttcgaagtcctccaaatattctctgctgttgatctctgtcaacctgctaatcgtacgatc 1028 Query: 291 tttggcgaatcctagctcattgtccacacagagatcaggatcatcacttttccgcgagcg 350 ||||| ||||| |||||||||||||| || || |||| || || |||||| | ||||| Sbjct: 1027 cttggcaaatccaagctcattgtccacgcataggtcagtgtcgtcgcttttctgtgagcg 968 Query: 351 tgaagatctaggtgaacnnnnnnngtgcttcagcgaccgtcacgacgttctcgaatagct 410 ||||||||| |||||| |||||||||| || ||||||| |||||||| || Sbjct: 967 tgaagatcttggtgaa-accttccgtgcttcagcaacagtcacgatattctcgaacagtc 909 Query: 411 ctatcggctcggcctcggctgtgcataatagcctccccttgttctcatacattacatcaa 470 ||| || | ||||||||||| ||||| ||||| |||||||||| ||||| ||||||| Sbjct: 908 ctactggtccagcctcggctgtacataacagccttgccttgttctcgtacataacatcaa 849 Query: 471 ccaacgtgacaaaccgatacgctgcagttctgttatgatatccaaacttagggacacctt 530 || ||||| |||||||| ||||| ||||||||| | | |||| ||| || | ||| | Sbjct: 848 tcagtgtgacgaaccgataagctgctgttctgttactagacccaagctttggaataccat 789 Query: 531 caactgcaagggtgtgaaacttcttaaatagcccaaaatagtccgctgcgcctataggtt 590 ||| ||| ||||||||||| || ||||| || ||||| || || ||||| |||| ||||| Sbjct: 788 caagtgccagggtgtgaaattttttaaagagtccaaagtaatctgctgcacctaaaggtt 729 Query: 591 tgtcacaaagatcttcaaaccggaaatatgcacatccatttgctcccagtgggacctgca 650 | |||||||| |||||||| | ||||||||||| ||||||||||| || || ||||| | Sbjct: 728 tatcacaaaggtcttcaaaaggaaaatatgcacaaccatttgctcctaggggaacctgta 669 Query: 651 aatgccgtcccataacgacttcgactgtttgaggagtaggttcctcatctccaatcaaag 710 | | || |||||||| ||||| || ||||| || | |||| |||||||||||| |||| Sbjct: 668 atttccttcccataattacttcaacagtttgtgggctgggtttctcatctccaattaaag 609 Query: 711 attggaatttctgtttaagaa 731 | |||| |||||||| |||| Sbjct: 608 actggagcttctgtttcagaa 588
>gb|AY111372.1| Zea mays CL11075_2 mRNA sequence Length = 722 Score = 141 bits (71), Expect = 4e-30 Identities = 122/138 (88%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 231 ttcgaagtcctccaagtactctctgctgttg--agctctgtcaacctgctaatcgtacga 288 ||||||||||||||| || |||||||||||| | ||||||||||||||||||||||||| Sbjct: 416 ttcgaagtcctccaaatattctctgctgttggaatctctgtcaacctgctaatcgtacga 475 Query: 289 tctttggcgaatcctagctcattgtccacacagagatcaggatcatcacttttccgcgag 348 || ||||| ||||| ||||||||||||||||| || ||||| || ||||||||| | ||| Sbjct: 476 tccttggcaaatccaagctcattgtccacacataggtcagggtcgtcacttttctgtgag 535 Query: 349 cgtgaagatctaggtgaa 366 || |||||||| |||||| Sbjct: 536 cgcgaagatcttggtgaa 553 Score = 50.1 bits (25), Expect = 0.011 Identities = 67/81 (82%) Strand = Plus / Plus Query: 422 gcctcggctgtgcataatagcctccccttgttctcatacattacatcaaccaacgtgaca 481 ||||||||||| ||||| ||||| | ||| |||| ||||| ||||||| || ||||| Sbjct: 608 gcctcggctgtacataacagccttgctttggtctcgtacataacatcaatcagtgtgacg 667 Query: 482 aaccgatacgctgcagttctg 502 |||||||| ||||| |||||| Sbjct: 668 aaccgataagctgctgttctg 688
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 93.7 bits (47), Expect = 8e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 272 acctgctaatcgtacgatctttggcgaatcctagctcattgtccacacagagatcaggat 331 |||| ||||| || ||||| ||||| ||||||||||||||||||||||| | ||||||| Sbjct: 10097143 acctactaattgttcgatccttggcaaatcctagctcattgtccacacacaagtcaggat 10097084 Query: 332 catcacttttccgcgagcgtgaagatctagg 362 ||||| ||||| |||| |||||||||||||| Sbjct: 10097083 catcagttttctgcgaccgtgaagatctagg 10097053 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 643 gacctgcaaatgccgtcccataacgacttcgactgtttgaggagtaggttcctcatctcc 702 ||||||||| |||||||||||||| ||||| ||||| ||||| |||||||||||||||| Sbjct: 10095962 gacctgcaattgccgtcccataacaacttcaactgtctgaggtctaggttcctcatctcc 10095903 Query: 703 aatcaaagattggaatttctgtttaagaa 731 ||| || | ||| || ||||||||||||| Sbjct: 10095902 aattaatgtttgcaacttctgtttaagaa 10095874 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 213 gggctgttgccattttgcttcgaagtcctccaagtactctctgctgttgagctctgtcaa 272 ||||||| || |||| ||||| |||||||||||||||||||| ||||||| ||||||||| Sbjct: 10097284 gggctgtcgcaatttcgcttcaaagtcctccaagtactctctactgttgatctctgtcaa 10097225 Query: 273 cctgc 277 ||||| Sbjct: 10097224 cctgc 10097220 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 560 agcccaaaatagtccgctgcgcctataggtttgtcacaaagatcttcaaaccggaaatat 619 ||||||||||| || ||||| |||| ||| | ||||||||||||||||| |||||||| Sbjct: 10096134 agcccaaaataatcagctgcacctaaaggcctatcacaaagatcttcaaatgggaaatat 10096075 Query: 620 gcacatccatttgctcccagtgggacctgcaa 651 ||| ||||||||||||||||| |||||||| Sbjct: 10096074 gcaatcccatttgctcccagtggaacctgcaa 10096043 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Minus Query: 462 ttacatcaaccaacgtgacaaaccgatacgctgcagttctgttatgatatccaaacttag 521 ||||||||||||| |||||||||||||| ||||| |||| ||| ||| | |||||||||| Sbjct: 10096325 ttacatcaaccaatgtgacaaaccgataagctgctgttcggttctgagacccaaacttag 10096266 Query: 522 ggacaccttcaactgcaagggtgtgaaactt 552 | | || |||| ||| | |||||||||||| Sbjct: 10096265 gaatgccatcaagtgccaaggtgtgaaactt 10096235
>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0023I13 Length = 165911 Score = 93.7 bits (47), Expect = 8e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 272 acctgctaatcgtacgatctttggcgaatcctagctcattgtccacacagagatcaggat 331 |||| ||||| || ||||| ||||| ||||||||||||||||||||||| | ||||||| Sbjct: 56489 acctactaattgttcgatccttggcaaatcctagctcattgtccacacacaagtcaggat 56430 Query: 332 catcacttttccgcgagcgtgaagatctagg 362 ||||| ||||| |||| |||||||||||||| Sbjct: 56429 catcagttttctgcgaccgtgaagatctagg 56399 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 643 gacctgcaaatgccgtcccataacgacttcgactgtttgaggagtaggttcctcatctcc 702 ||||||||| |||||||||||||| ||||| ||||| ||||| |||||||||||||||| Sbjct: 55308 gacctgcaattgccgtcccataacaacttcaactgtctgaggtctaggttcctcatctcc 55249 Query: 703 aatcaaagattggaatttctgtttaagaa 731 ||| || | ||| || ||||||||||||| Sbjct: 55248 aattaatgtttgcaacttctgtttaagaa 55220 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 213 gggctgttgccattttgcttcgaagtcctccaagtactctctgctgttgagctctgtcaa 272 ||||||| || |||| ||||| |||||||||||||||||||| ||||||| ||||||||| Sbjct: 56630 gggctgtcgcaatttcgcttcaaagtcctccaagtactctctactgttgatctctgtcaa 56571 Query: 273 cctgc 277 ||||| Sbjct: 56570 cctgc 56566 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 560 agcccaaaatagtccgctgcgcctataggtttgtcacaaagatcttcaaaccggaaatat 619 ||||||||||| || ||||| |||| ||| | ||||||||||||||||| |||||||| Sbjct: 55480 agcccaaaataatcagctgcacctaaaggcctatcacaaagatcttcaaatgggaaatat 55421 Query: 620 gcacatccatttgctcccagtgggacctgcaa 651 ||| ||||||||||||||||| |||||||| Sbjct: 55420 gcaatcccatttgctcccagtggaacctgcaa 55389 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Minus Query: 462 ttacatcaaccaacgtgacaaaccgatacgctgcagttctgttatgatatccaaacttag 521 ||||||||||||| |||||||||||||| ||||| |||| ||| ||| | |||||||||| Sbjct: 55671 ttacatcaaccaatgtgacaaaccgataagctgctgttcggttctgagacccaaacttag 55612 Query: 522 ggacaccttcaactgcaagggtgtgaaactt 552 | | || |||| ||| | |||||||||||| Sbjct: 55611 gaatgccatcaagtgccaaggtgtgaaactt 55581
>emb|BX828881.1|CNS0A2QV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL46ZD11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1628 Score = 67.9 bits (34), Expect = 5e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 448 cttgttctcatacattacatcaaccaacgtgacaaaccgatacgctgcagttct 501 |||||||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 1312 cttgttctcatacattacatcaaccagtgtgacaaagcggtaagctgcagttct 1259
>gb|BT020434.1| Arabidopsis thaliana At4g28070 mRNA, complete cds Length = 1422 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 447 ccttgttctcatacattacatcaaccaacgtgacaaaccgatacgctgcagttctgttat 506 ||||||||||||||||||||||||||| || ||||| || || |||||||| || |||| Sbjct: 1171 ccttgttctcatacattacatcaaccagtgtcacaaagcggtaagctgcagtcctattat 1112 Query: 507 g 507 | Sbjct: 1111 g 1111
>ref|NM_001036660.1| Arabidopsis thaliana ATPase AT4G28070 transcript variant AT4G28070.2 mRNA, complete cds Length = 1422 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 447 ccttgttctcatacattacatcaaccaacgtgacaaaccgatacgctgcagttctgttat 506 ||||||||||||||||||||||||||| || ||||| || || |||||||| || |||| Sbjct: 1171 ccttgttctcatacattacatcaaccagtgtcacaaagcggtaagctgcagtcctattat 1112 Query: 507 g 507 | Sbjct: 1111 g 1111
>ref|NM_118946.2| Arabidopsis thaliana ATPase AT4G28070 transcript variant AT4G28070.1 mRNA, complete cds Length = 2348 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 447 ccttgttctcatacattacatcaaccaacgtgacaaaccgatacgctgcagttctgttat 506 ||||||||||||||||||||||||||| || ||||| || || |||||||| || |||| Sbjct: 1261 ccttgttctcatacattacatcaaccagtgtcacaaagcggtaagctgcagtcctattat 1202 Query: 507 g 507 | Sbjct: 1201 g 1201
>gb|BT015879.1| Arabidopsis thaliana At4g28070 gene, complete cds Length = 1846 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 447 ccttgttctcatacattacatcaaccaacgtgacaaaccgatacgctgcagttctgttat 506 ||||||||||||||||||||||||||| || ||||| || || |||||||| || |||| Sbjct: 1242 ccttgttctcatacattacatcaaccagtgtcacaaagcggtaagctgcagtcctattat 1183 Query: 507 g 507 | Sbjct: 1182 g 1182
>emb|BX827763.1|CNS0A2A3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZA05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1679 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 447 ccttgttctcatacattacatcaaccaacgtgacaaaccgatacgctgcagttctgttat 506 ||||||||||||||||||||||||||| || ||||| || || |||||||| || |||| Sbjct: 1263 ccttgttctcatacattacatcaaccagtgtcacaaagcggtaagctgcagtcctattat 1204 Query: 507 g 507 | Sbjct: 1203 g 1203
>ref|NM_016099.2| Homo sapiens golgi autoantigen, golgin subfamily a, 7 (GOLGA7), transcript variant 1, mRNA Length = 1919 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 atatttataacaaaactataat 142 |||||||||||||||||||||| Sbjct: 1362 atatttataacaaaactataat 1341
>ref|NM_001002296.1| Homo sapiens golgi autoantigen, golgin subfamily a, 7 (GOLGA7), transcript variant 2, mRNA Length = 2042 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 atatttataacaaaactataat 142 |||||||||||||||||||||| Sbjct: 1485 atatttataacaaaactataat 1464
>gb|BC001227.2| Homo sapiens golgi autoantigen, golgin subfamily a, 7, mRNA (cDNA clone MGC:4876 IMAGE:3456384), complete cds Length = 1904 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 atatttataacaaaactataat 142 |||||||||||||||||||||| Sbjct: 1347 atatttataacaaaactataat 1326
>ref|XM_844157.1| PREDICTED: Canis familiaris similar to golgi autoantigen, golgin subfamily a, 7 (LOC607476), mRNA Length = 1494 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 atatttataacaaaactataat 142 |||||||||||||||||||||| Sbjct: 1375 atatttataacaaaactataat 1354
>emb|CR617602.1| full-length cDNA clone CS0DA001YL17 of Neuroblastoma of Homo sapiens (human) Length = 1850 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 atatttataacaaaactataat 142 |||||||||||||||||||||| Sbjct: 1332 atatttataacaaaactataat 1311
>emb|CR616191.1| full-length cDNA clone CS0DA002YE22 of Neuroblastoma of Homo sapiens (human) Length = 1911 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 atatttataacaaaactataat 142 |||||||||||||||||||||| Sbjct: 1389 atatttataacaaaactataat 1368
>emb|CR609818.1| full-length cDNA clone CS0DI064YA01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1863 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 atatttataacaaaactataat 142 |||||||||||||||||||||| Sbjct: 1358 atatttataacaaaactataat 1337
>emb|CR606993.1| full-length cDNA clone CS0DI001YL07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1822 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 atatttataacaaaactataat 142 |||||||||||||||||||||| Sbjct: 1310 atatttataacaaaactataat 1289
>emb|CR596558.1| full-length cDNA clone CS0DI026YE24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1821 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 atatttataacaaaactataat 142 |||||||||||||||||||||| Sbjct: 1310 atatttataacaaaactataat 1289
>gb|AC009630.14| Homo sapiens chromosome 8, clone RP11-360L9, complete sequence Length = 219622 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Plus Query: 121 atatttataacaaaactataat 142 |||||||||||||||||||||| Sbjct: 138187 atatttataacaaaactataat 138208
>gb|AF125102.1|AF125102 Homo sapiens HSPC041 protein mRNA, complete cds Length = 1898 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 atatttataacaaaactataat 142 |||||||||||||||||||||| Sbjct: 1326 atatttataacaaaactataat 1305
>dbj|AB104615.1| Homo sapiens gcp16 mRNA for Golgi complex-associated protein of 16kDa, complete cds Length = 1949 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 atatttataacaaaactataat 142 |||||||||||||||||||||| Sbjct: 1342 atatttataacaaaactataat 1321
>dbj|AK026613.1| Homo sapiens cDNA: FLJ22960 fis, clone KAT10193, highly similar to AF125102 Homo sapiens HSPC041 protein mRNA Length = 1954 Score = 44.1 bits (22), Expect = 0.66 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 atatttataacaaaactataat 142 |||||||||||||||||||||| Sbjct: 1347 atatttataacaaaactataat 1326
>emb|AL136080.6| Human DNA sequence from clone RP11-448E12 on chromosome Xq22.1-23 Contains part of the COL4A6 gene for collagen type IV alpha 6, complete sequence Length = 116106 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 690 gttcctcatctccaatcaaag 710 ||||||||||||||||||||| Sbjct: 49082 gttcctcatctccaatcaaag 49102
>emb|AL109760.3|HSJ513G18 Human DNA sequence from clone RP3-513G18 on chromosome 4, complete sequence Length = 112560 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 gtgcaggggctgttgccattt 227 ||||||||||||||||||||| Sbjct: 89404 gtgcaggggctgttgccattt 89424
>emb|BX248505.8| Zebrafish DNA sequence from clone CH211-87L2 in linkage group 14, complete sequence Length = 189425 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 atatttataacaaaactataa 141 ||||||||||||||||||||| Sbjct: 116869 atatttataacaaaactataa 116889
>dbj|AK098221.1| Homo sapiens cDNA FLJ40902 fis, clone UTERU2004061 Length = 2227 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 690 gttcctcatctccaatcaaag 710 ||||||||||||||||||||| Sbjct: 1247 gttcctcatctccaatcaaag 1267
>emb|BX255919.15| Zebrafish DNA sequence from clone DKEY-259P11 in linkage group 8, complete sequence Length = 168607 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 atatttataacaaaactataa 141 ||||||||||||||||||||| Sbjct: 80610 atatttataacaaaactataa 80630 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,032,620 Number of Sequences: 3902068 Number of extensions: 6032620 Number of successful extensions: 117355 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 29 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117255 Number of HSP's gapped (non-prelim): 98 length of query: 749 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 726 effective length of database: 17,143,297,704 effective search space: 12446034133104 effective search space used: 12446034133104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)