| Clone Name | rbaal14b23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY377991.1| Triticum aestivum chloroplast-localized Ptr ToxA-binding protein1 (TaThf1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1130 Score = 278 bits (140), Expect = 5e-72 Identities = 163/171 (95%) Strand = Plus / Minus Query: 1 aggttgagttaatgcttcaagggataagtgcttccatcgaattttgcaacagcctcgttc 60 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 875 aggttgagttaatgcttcaagggataagcgcttccatcgaattttgcaacagcctcattc 816 Query: 61 ggcttgggcgtctccaatctctctgctctcttcttcttttccctctcgacgtattcctta 120 ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 815 ggcttgggcgtctccaatctctcctctctcttcttcttttccctctcgatgtattccttg 756 Query: 121 agaagttccttggcttgaaccaatttcnacagtaagttgcggtaaacgtca 171 ||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 755 agaagttccttggcttgaaccaatttcgagagtaagttgcggtaaacgtca 705
>gb|AY736122.1| Triticum aestivum chloroplast inositol phosphatase-like protein mRNA, complete cds; nuclear gene for chloroplast product Length = 909 Score = 270 bits (136), Expect = 1e-69 Identities = 162/171 (94%) Strand = Plus / Minus Query: 1 aggttgagttaatgcttcaagggataagtgcttccatcgaattttgcaacagcctcgttc 60 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 909 aggttgagttaatgcttcaagggataagcgcttccatcgaattttgcaacagcctcattc 850 Query: 61 ggcttgggcgtctccaatctctctgctctcttcttcttttccctctcgacgtattcctta 120 ||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||| Sbjct: 849 ggcttgggcgtctccaatctctcctctctcttcttcttttccctcttgatgtattccttg 790 Query: 121 agaagttccttggcttgaaccaatttcnacagtaagttgcggtaaacgtca 171 ||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 789 agaagttccttggcttgaaccaatttcgagagtaagttgcggtaaacgtca 739
>ref|XM_478693.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1153 Score = 77.8 bits (39), Expect = 1e-11 Identities = 71/82 (86%) Strand = Plus / Minus Query: 86 ctctcttcttcttttccctctcgacgtattccttaagaagttccttggcttgaaccaatt 145 ||||||||||||||||||| || ||||||||||| ||||||||||| || || ||||||| Sbjct: 886 ctctcttcttcttttccctttccacgtattccttgagaagttccttagcctggaccaatt 827 Query: 146 tcnacagtaagttgcggtaaac 167 | | |||| ||| |||||||| Sbjct: 826 tggagagtatgttccggtaaac 805
>gb|AY224446.1| Oryza sativa (japonica cultivar-group) isolate 23045 inositol phosphatase-like protein mRNA, complete cds Length = 864 Score = 77.8 bits (39), Expect = 1e-11 Identities = 71/82 (86%) Strand = Plus / Minus Query: 86 ctctcttcttcttttccctctcgacgtattccttaagaagttccttggcttgaaccaatt 145 ||||||||||||||||||| || ||||||||||| ||||||||||| || || ||||||| Sbjct: 787 ctctcttcttcttttccctttccacgtattccttgagaagttccttagcctggaccaatt 728 Query: 146 tcnacagtaagttgcggtaaac 167 | | |||| ||| |||||||| Sbjct: 727 tggagagtatgttccggtaaac 706
>dbj|AK064914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M13, full insert sequence Length = 1152 Score = 77.8 bits (39), Expect = 1e-11 Identities = 71/82 (86%) Strand = Plus / Minus Query: 86 ctctcttcttcttttccctctcgacgtattccttaagaagttccttggcttgaaccaatt 145 ||||||||||||||||||| || ||||||||||| ||||||||||| || || ||||||| Sbjct: 885 ctctcttcttcttttccctttccacgtattccttgagaagttccttagcctggaccaatt 826 Query: 146 tcnacagtaagttgcggtaaac 167 | | |||| ||| |||||||| Sbjct: 825 tggagagtatgttccggtaaac 804
>dbj|AK059695.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B12, full insert sequence Length = 1512 Score = 77.8 bits (39), Expect = 1e-11 Identities = 71/82 (86%) Strand = Plus / Minus Query: 86 ctctcttcttcttttccctctcgacgtattccttaagaagttccttggcttgaaccaatt 145 ||||||||||||||||||| || ||||||||||| ||||||||||| || || ||||||| Sbjct: 1121 ctctcttcttcttttccctttccacgtattccttgagaagttccttagcctggaccaatt 1062 Query: 146 tcnacagtaagttgcggtaaac 167 | | |||| ||| |||||||| Sbjct: 1061 tggagagtatgttccggtaaac 1040
>ref|NM_127659.1| Arabidopsis thaliana THF1 AT2G20890 (THF1) mRNA, complete cds Length = 1246 Score = 56.0 bits (28), Expect = 4e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 90 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 137 ||||||||| ||||||||||| || |||||||| | |||||||||||| Sbjct: 916 cttcttcttctccctctcgacatactccttaagcaattccttggcttg 869
>gb|AY081596.1| Arabidopsis thaliana unknown protein (At2g20890) mRNA, complete cds Length = 953 Score = 56.0 bits (28), Expect = 4e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 90 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 137 ||||||||| ||||||||||| || |||||||| | |||||||||||| Sbjct: 801 cttcttcttctccctctcgacatactccttaagcaattccttggcttg 754
>gb|AY062799.1| Arabidopsis thaliana Unknown protein (At2g20890; F5H14.14) mRNA, complete cds Length = 1143 Score = 56.0 bits (28), Expect = 4e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 90 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 137 ||||||||| ||||||||||| || |||||||| | |||||||||||| Sbjct: 911 cttcttcttctccctctcgacatactccttaagcaattccttggcttg 864
>emb|BX818803.1|CNS0A8TL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 324 Score = 56.0 bits (28), Expect = 4e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 90 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 137 ||||||||| ||||||||||| || |||||||| | |||||||||||| Sbjct: 88 cttcttcttctccctctcgacatactccttaagcaattccttggcttg 41
>emb|BX820185.1|CNS0A8J4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS88ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1158 Score = 56.0 bits (28), Expect = 4e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 90 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 137 ||||||||| ||||||||||| || |||||||| | |||||||||||| Sbjct: 905 cttcttcttctccctctcgacatactccttaagcaattccttggcttg 858
>emb|BX820020.1|CNS0A8FF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS62ZD04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1131 Score = 56.0 bits (28), Expect = 4e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 90 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 137 ||||||||| ||||||||||| || |||||||| | |||||||||||| Sbjct: 877 cttcttcttctccctctcgacatactccttaagcaattccttggcttg 830
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.009 Identities = 50/59 (84%) Strand = Plus / Plus Query: 109 acgtattccttaagaagttccttggcttgaaccaatttcnacagtaagttgcggtaaac 167 ||||||||||| ||||||||||| || || |||||||| | |||| ||| |||||||| Sbjct: 22266167 acgtattccttgagaagttccttagcctggaccaatttggagagtatgttccggtaaac 22266225 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 ctctcttcttcttttccct 104 ||||||||||||||||||| Sbjct: 22265851 ctctcttcttcttttccct 22265869
>gb|AY087394.1| Arabidopsis thaliana clone 34875 mRNA, complete sequence Length = 1246 Score = 48.1 bits (24), Expect = 0.009 Identities = 42/48 (87%) Strand = Plus / Minus Query: 90 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 137 ||||||||| ||||||||||| || |||||||| | ||| |||||||| Sbjct: 916 cttcttcttctccctctcgacatactccttaagcaattcattggcttg 869
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 48.1 bits (24), Expect = 0.009 Identities = 50/59 (84%) Strand = Plus / Plus Query: 109 acgtattccttaagaagttccttggcttgaaccaatttcnacagtaagttgcggtaaac 167 ||||||||||| ||||||||||| || || |||||||| | |||| ||| |||||||| Sbjct: 71413 acgtattccttgagaagttccttagcctggaccaatttggagagtatgttccggtaaac 71471 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 ctctcttcttcttttccct 104 ||||||||||||||||||| Sbjct: 71097 ctctcttcttcttttccct 71115
>gb|AY899908.1| Arabidopsis thaliana chloroplast thylakoid formation 1 (THF1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1245 Score = 48.1 bits (24), Expect = 0.009 Identities = 42/48 (87%) Strand = Plus / Minus Query: 90 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 137 ||||||||| ||||||||||| || |||||||| | ||| |||||||| Sbjct: 915 cttcttcttctccctctcgacatactccttaagcaattcattggcttg 868
>gb|AC121803.3| Mus musculus BAC clone RP23-441A23 from chromosome 6, complete sequence Length = 211809 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Plus Query: 86 ctctcttcttcttttccctctc 107 |||||||||||||||||||||| Sbjct: 68122 ctctcttcttcttttccctctc 68143
>dbj|AP004491.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17G08, TM0023, complete sequence Length = 91039 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 ctctctgctctcttcttctttt 100 |||||||||||||||||||||| Sbjct: 32616 ctctctgctctcttcttctttt 32595
>gb|AC105487.6| Rattus norvegicus 1 BAC CH230-229J7 (Children's Hospital Oakland Research Institute) complete sequence Length = 221396 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 tctcttcttcttttccctctc 107 ||||||||||||||||||||| Sbjct: 88719 tctcttcttcttttccctctc 88699
>emb|BX908742.7| Zebrafish DNA sequence from clone DKEY-246G23 in linkage group 18, complete sequence Length = 232903 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 tattccttaagaagttccttg 132 ||||||||||||||||||||| Sbjct: 12936 tattccttaagaagttccttg 12916
>dbj|AK078026.1| Mus musculus 11 days embryo head cDNA, RIKEN full-length enriched library, clone:6230415J03 product:unclassifiable, full insert sequence Length = 1787 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 tctcttcttcttttccctctc 107 ||||||||||||||||||||| Sbjct: 1109 tctcttcttcttttccctctc 1089
>gb|AC113955.20| Mus musculus chromosome 7, clone RP23-402K24, complete sequence Length = 196206 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 tctcttcttcttttccctctc 107 ||||||||||||||||||||| Sbjct: 118373 tctcttcttcttttccctctc 118353
>emb|AL683856.10| Mouse DNA sequence from clone RP23-46J2 on chromosome X, complete sequence Length = 224461 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 tctcttcttcttttccctctc 107 ||||||||||||||||||||| Sbjct: 158791 tctcttcttcttttccctctc 158771
>gb|AC117787.8| Mus musculus chromosome 1, clone RP24-546N2, complete sequence Length = 203962 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 tctctgctctcttcttcttttccc 103 ||||||||||||||| |||||||| Sbjct: 129668 tctctgctctcttctccttttccc 129691
>ref|XM_529718.1| PREDICTED: Pan troglodytes LOC453671 (LOC453671), mRNA Length = 1007 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cttaagaagttccttggctt 136 |||||||||||||||||||| Sbjct: 135 cttaagaagttccttggctt 154
>gb|AC113968.12| Mus musculus chromosome 8, clone RP23-120M17, complete sequence Length = 220191 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 tctcttcttcttttccctct 106 |||||||||||||||||||| Sbjct: 16214 tctcttcttcttttccctct 16195
>gb|AC116812.10| Mus musculus chromosome 15, clone RP24-357G13, complete sequence Length = 183993 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tctctctgctctcttcttct 97 |||||||||||||||||||| Sbjct: 22366 tctctctgctctcttcttct 22385
>gb|AC099572.12| Mus musculus chromosome 15, clone RP23-16A17, complete sequence Length = 200229 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tctctctgctctcttcttct 97 |||||||||||||||||||| Sbjct: 5312 tctctctgctctcttcttct 5293
>gb|AC116871.6| Mus musculus chromosome 19, clone RP24-417P12, complete sequence Length = 161959 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tctctctgctctcttcttct 97 |||||||||||||||||||| Sbjct: 49162 tctctctgctctcttcttct 49181
>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on chromosome 19 Length = 413528 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 atctctctgctctcttcttctttt 100 ||||||||||| |||||||||||| Sbjct: 20020 atctctctgctgtcttcttctttt 20043
>gb|AC089992.2| Bos taurus clone RP42-210F11, complete sequence Length = 147922 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tctctctgctctcttcttct 97 |||||||||||||||||||| Sbjct: 69562 tctctctgctctcttcttct 69581
>gb|AC164532.4| Mus musculus chromosome 7, clone RP24-64B10, complete sequence Length = 206573 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tctctctgctctcttcttct 97 |||||||||||||||||||| Sbjct: 75337 tctctctgctctcttcttct 75356
>gb|DP000008.1| Bos taurus target 1 genomic scaffold Length = 2072671 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tctctctgctctcttcttct 97 |||||||||||||||||||| Sbjct: 1297735 tctctctgctctcttcttct 1297754
>ref|XM_947168.1| Theileria annulata strain Ankara exonuclease (TA13280) partial mRNA Length = 3363 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 ttttccctctcgacgtattcctta 120 |||||||||||||| ||||||||| Sbjct: 956 ttttccctctcgacatattcctta 933
>emb|CR854896.11| Zebrafish DNA sequence from clone DKEY-239B8 in linkage group 13, complete sequence Length = 165556 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tctctctgctctcttcttct 97 |||||||||||||||||||| Sbjct: 100624 tctctctgctctcttcttct 100605 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tctctctgctctcttcttct 97 |||||||||||||||||||| Sbjct: 71564 tctctctgctctcttcttct 71545
>emb|AL772182.3| Human DNA sequence from clone RP11-36K22 on chromosome X, complete sequence Length = 161047 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ctccaatctctctgctctct 91 |||||||||||||||||||| Sbjct: 36550 ctccaatctctctgctctct 36531
>gb|AC128353.6| Rattus norvegicus 13 BAC CH230-148A5 (Children's Hospital Oakland Research Institute) complete sequence Length = 207556 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 tgctctcttcttcttttccctctc 107 |||||||||||||| ||||||||| Sbjct: 122070 tgctctcttcttctcttccctctc 122047
>emb|BX901922.9| Zebrafish DNA sequence from clone DKEY-33C12 in linkage group 13, complete sequence Length = 242350 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tctctctgctctcttcttct 97 |||||||||||||||||||| Sbjct: 187137 tctctctgctctcttcttct 187156 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tctctctgctctcttcttct 97 |||||||||||||||||||| Sbjct: 157745 tctctctgctctcttcttct 157764
>emb|BX000359.7| Mouse DNA sequence from clone RP23-343C18 on chromosome 11 Contains the gene for a novel helix-loop-helix DNA-binding domain containing protein, a novel gene, the Gosr1 gene for golgi SNAP receptor complex member 1 and a CpG island, complete sequence Length = 118586 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ctctcttcttcttttccctc 105 |||||||||||||||||||| Sbjct: 34246 ctctcttcttcttttccctc 34265
>emb|AL845307.29| Zebrafish DNA sequence from clone DKEY-56N17 in linkage group 13, complete sequence Length = 135795 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tctctctgctctcttcttct 97 |||||||||||||||||||| Sbjct: 120423 tctctctgctctcttcttct 120442
>emb|CR848040.6| Zebrafish DNA sequence from clone DKEY-19P15 in linkage group 13, complete sequence Length = 146215 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tctctctgctctcttcttct 97 |||||||||||||||||||| Sbjct: 40145 tctctctgctctcttcttct 40164
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 ccttggcttgaaccaatttc 147 |||||||||||||||||||| Sbjct: 2294119 ccttggcttgaaccaatttc 2294138
>gb|AF479287.1| Mus musculus PHF5B (Phf5b) pseudogene, complete sequence Length = 5285 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tctctctgctctcttcttct 97 |||||||||||||||||||| Sbjct: 3719 tctctctgctctcttcttct 3738
>gb|AC074312.64| Mus musculus strain C57BL/6J clone rp23-311c19 map 7, complete sequence Length = 220077 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tctctctgctctcttcttct 97 |||||||||||||||||||| Sbjct: 37435 tctctctgctctcttcttct 37416
>gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H14 map mi148, complete sequence Length = 129667 Score = 40.1 bits (20), Expect = 2.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 102 cctctcgacgtattccttaagaagttccttggcttg 137 ||||||||| || |||||||| | |||||||||||| Sbjct: 42757 cctctcgacatactccttaagcaattccttggcttg 42792
>gb|AC016251.9| Homo sapiens chromosome 15, clone RP11-759A24, complete sequence Length = 182943 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cttaagaagttccttggctt 136 |||||||||||||||||||| Sbjct: 119228 cttaagaagttccttggctt 119247
>gb|AC012409.9| Homo sapiens chromosome 15, clone RP11-327J17, complete sequence Length = 183014 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cttaagaagttccttggctt 136 |||||||||||||||||||| Sbjct: 48887 cttaagaagttccttggctt 48906
>gb|AC099538.2| Homo sapiens chromosome 3 clone RP11-90I9, complete sequence Length = 170033 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 gttgagttaatgcttcaagg 22 |||||||||||||||||||| Sbjct: 6476 gttgagttaatgcttcaagg 6495
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 tctctctgctctcttcttcttttc 101 ||||||| |||||||||||||||| Sbjct: 16997189 tctctctcctctcttcttcttttc 16997166 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 tctctctgctctcttcttcttttc 101 ||||||| |||||||||||||||| Sbjct: 16976888 tctctctcctctcttcttcttttc 16976865 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 agggataagtgcttccatc 38 ||||||||||||||||||| Sbjct: 11465404 agggataagtgcttccatc 11465386
>emb|BX818901.1|CNS0A8Y0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB24ZE08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1114 Score = 40.1 bits (20), Expect = 2.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 102 cctctcgacgtattccttaagaagttccttggcttg 137 ||||||||| || |||||||| | |||||||||||| Sbjct: 886 cctctcgacatactccttaagcaattccttggcttg 851
>gb|AC008537.5|AC008537 Homo sapiens chromosome 19 clone CTC-490E21, complete sequence Length = 169089 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 atctctctgctctcttcttctttt 100 ||||||||||| |||||||||||| Sbjct: 41020 atctctctgctgtcttcttctttt 41043
>gb|AC099053.2| Homo sapiens chromosome 3 clone RP11-464H2, complete sequence Length = 200069 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 gttgagttaatgcttcaagg 22 |||||||||||||||||||| Sbjct: 172320 gttgagttaatgcttcaagg 172339
>gb|AC023795.18| Homo sapiens 12 BAC RP11-242B24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161838 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctctgctctcttcttctttt 100 |||||||||||||||||||| Sbjct: 101981 ctctgctctcttcttctttt 102000
>dbj|AK173094.1| Mus musculus premature mRNA for mKIAA1067 protein Length = 6719 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ctctctgctctcttcttctt 98 |||||||||||||||||||| Sbjct: 1932 ctctctgctctcttcttctt 1951
>gb|AC153611.12| Mus musculus 6 BAC RP23-110P14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174538 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tctctctgctctcttcttct 97 |||||||||||||||||||| Sbjct: 67099 tctctctgctctcttcttct 67118
>emb|AL929156.10| Mouse DNA sequence from clone RP23-475H18 on chromosome 2, complete sequence Length = 206918 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ctcttcttcttttccctctc 107 |||||||||||||||||||| Sbjct: 117334 ctcttcttcttttccctctc 117353
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 tctctctgctctcttcttcttttc 101 ||||||| |||||||||||||||| Sbjct: 16950422 tctctctcctctcttcttcttttc 16950399 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 tctctctgctctcttcttcttttc 101 ||||||| |||||||||||||||| Sbjct: 16930121 tctctctcctctcttcttcttttc 16930098 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 agggataagtgcttccatc 38 ||||||||||||||||||| Sbjct: 11465075 agggataagtgcttccatc 11465057
>emb|AL732639.5|CNS08C9E Oryza sativa chromosome 12, . BAC OSJNBa0038H18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150238 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 tctctctgctctcttcttcttttc 101 ||||||| |||||||||||||||| Sbjct: 119232 tctctctcctctcttcttcttttc 119209 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 tctctctgctctcttcttcttttc 101 ||||||| |||||||||||||||| Sbjct: 98931 tctctctcctctcttcttcttttc 98908
>gb|L47539.1|HEACRP Haemophilus somnus cyclic AMP receptor protein (crp) gene, complete cds Length = 752 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 acagcctcgttcggcttggg 68 |||||||||||||||||||| Sbjct: 359 acagcctcgttcggcttggg 378
>emb|AL645861.12| Mouse DNA sequence from clone RP23-184G6 on chromosome 11, complete sequence Length = 212385 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctctctgctctcttcttctt 98 |||||||||||||||||||| Sbjct: 47200 ctctctgctctcttcttctt 47181
>dbj|AP001091.5| Homo sapiens genomic DNA, chromosome 18p clone:RP11-713N19, complete sequences Length = 207785 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ctcttcttcttttccctctc 107 |||||||||||||||||||| Sbjct: 13020 ctcttcttcttttccctctc 13039
>ref|NM_124395.3| Arabidopsis thaliana oxidoreductase AT5G50160 mRNA, complete cds Length = 2370 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 ctctcttcttcttttccct 104 ||||||||||||||||||| Sbjct: 562 ctctcttcttcttttccct 580
>ref|NM_115393.1| Arabidopsis thaliana unknown protein AT3G55350 mRNA, complete cds Length = 1391 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 tctctgctctcttcttctt 98 ||||||||||||||||||| Sbjct: 88 tctctgctctcttcttctt 70
>ref|NM_100803.3| Arabidopsis thaliana unknown protein AT1G09330 mRNA, complete cds Length = 990 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 78 tctctctgctctcttcttc 96 ||||||||||||||||||| Sbjct: 293 tctctctgctctcttcttc 311
>gb|AC132886.18| Mus musculus chromosome 13, clone RP24-267I21, complete sequence Length = 184315 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tcttcttcttttccctctc 107 ||||||||||||||||||| Sbjct: 12142 tcttcttcttttccctctc 12124
>ref|NM_189336.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1278 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctcttcttcttttccctct 106 ||||||||||||||||||| Sbjct: 320 ctcttcttcttttccctct 302
>gb|AC158909.6| Mus musculus chromosome 1, clone RP23-118K4, complete sequence Length = 218810 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 78 tctctctgctctcttcttc 96 ||||||||||||||||||| Sbjct: 28521 tctctctgctctcttcttc 28539
>ref|XM_453820.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D17182g predicted mRNA Length = 2775 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 82 tctgctctcttcttctttt 100 ||||||||||||||||||| Sbjct: 1823 tctgctctcttcttctttt 1805
>gb|AF126403.6| Homo sapiens chromosome 8 clone GS1-5O10 map q24.13, complete sequence Length = 159572 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 82 tctgctctcttcttctttt 100 ||||||||||||||||||| Sbjct: 7081 tctgctctcttcttctttt 7063
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 ctctgctctcttcttcttt 99 ||||||||||||||||||| Sbjct: 34474964 ctctgctctcttcttcttt 34474946
>gb|AC124583.4| Mus musculus BAC clone RP23-123P18 from chromosome 17, complete sequence Length = 221980 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 82 tctgctctcttcttctttt 100 ||||||||||||||||||| Sbjct: 22817 tctgctctcttcttctttt 22799
>gb|AC093086.4| Homo sapiens BAC clone RP11-746B14 from 7, complete sequence Length = 64601 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tcttcttcttttccctctc 107 ||||||||||||||||||| Sbjct: 46718 tcttcttcttttccctctc 46700
>emb|AJ410870.2|SSC410870 Sus scrofa COX7A1 gene, CAPNS1 gene, CKAP1 gene, POLR2I gene and CLIPR-59 gene (partial) Length = 147663 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 115 tccttaagaagttccttgg 133 ||||||||||||||||||| Sbjct: 103082 tccttaagaagttccttgg 103064
>ref|XM_743379.1| Aspergillus fumigatus Af293 C6 transcription factor (Afu3g01510) partial mRNA Length = 2223 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 tctcttcttcttttccctc 105 ||||||||||||||||||| Sbjct: 85 tctcttcttcttttccctc 103
>gb|AC131769.3| Mus musculus BAC clone RP24-290G2 from chromosome 3, complete sequence Length = 148675 Score = 38.2 bits (19), Expect = 8.3 Identities = 28/31 (90%) Strand = Plus / Plus Query: 77 atctctctgctctcttcttcttttccctctc 107 |||||||| |||||||||||| ||| ||||| Sbjct: 60171 atctctctcctctcttcttctcttctctctc 60201
>gb|AC125128.3| Mus musculus BAC clone RP24-289N17 from chromosome 14, complete sequence Length = 180645 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 gcgtctccaatctctctgc 86 ||||||||||||||||||| Sbjct: 115487 gcgtctccaatctctctgc 115469
>emb|AJ248287.2|CNSPAX05 Pyrococcus abyssi complete genome; segment 5/6 Length = 305600 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 ctctcttcttcttttccct 104 ||||||||||||||||||| Sbjct: 33879 ctctcttcttcttttccct 33897
>emb|AL589762.16| Human DNA sequence from clone RP11-396D18 on chromosome 1 Contains the 5' end of the PPP1R12B gene for protein phosphatase 1 regulatory (inhibitor) subunit 12B and a somatic cytochrome c (CYCS) pseudogene, complete sequence Length = 74089 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 84 tgctctcttcttcttttcc 102 ||||||||||||||||||| Sbjct: 19877 tgctctcttcttcttttcc 19895
>gb|BT009674.1| Arabidopsis thaliana At3g55350 mRNA, complete cds Length = 1221 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 tctctgctctcttcttctt 98 ||||||||||||||||||| Sbjct: 43 tctctgctctcttcttctt 25
>gb|AY074287.1| Arabidopsis thaliana putative FRO1 and FRO2 protein (At5g50160) mRNA, complete cds Length = 2386 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 ctctcttcttcttttccct 104 ||||||||||||||||||| Sbjct: 562 ctctcttcttcttttccct 580
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 82 tctgctctcttcttctttt 100 ||||||||||||||||||| Sbjct: 1458442 tctgctctcttcttctttt 1458424
>gb|AC162938.5| Mus musculus BAC clone RP23-104D6 from chromosome 9, complete sequence Length = 204657 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tcttcttcttttccctctc 107 ||||||||||||||||||| Sbjct: 86945 tcttcttcttttccctctc 86927
>emb|AL132954.1|ATT26I12 Arabidopsis thaliana DNA chromosome 3, BAC clone T26I12 Length = 88997 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 tctctgctctcttcttctt 98 ||||||||||||||||||| Sbjct: 86939 tctctgctctcttcttctt 86921
>emb|AJ320188.1|MDO320188 Malus domestica mRNA for MADS box protein (MADS12A gene) Length = 1096 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tcttcttcttttccctctc 107 ||||||||||||||||||| Sbjct: 206 tcttcttcttttccctctc 188
>emb|AJ320187.1|MDO320187 Malus domestica mRNA for MADS box protein (MADS12 gene) Length = 1176 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tcttcttcttttccctctc 107 ||||||||||||||||||| Sbjct: 206 tcttcttcttttccctctc 188
>emb|AJ248285.1|CNSPAX03 Pyrococcus abyssi complete genome; segment 3/6 Length = 307120 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 89 tcttcttcttttccctctc 107 ||||||||||||||||||| Sbjct: 185491 tcttcttcttttccctctc 185509
>gb|AC105224.8| Homo sapiens chromosome 18, clone RP11-689E3, complete sequence Length = 199051 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 tctctgctctcttcttctt 98 ||||||||||||||||||| Sbjct: 121003 tctctgctctcttcttctt 120985
>emb|CR392340.11| Zebrafish DNA sequence from clone DKEY-23G12 in linkage group 20, complete sequence Length = 247887 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 113 attccttaagaagttcctt 131 ||||||||||||||||||| Sbjct: 38433 attccttaagaagttcctt 38415
>emb|BX537344.8| Zebrafish DNA sequence from clone RP71-34B6 in linkage group 2, complete sequence Length = 174019 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 69 cgtctccaatctctctgctctct 91 ||||| ||||||||||||||||| Sbjct: 144152 cgtcttcaatctctctgctctct 144174
>gb|AC093521.3| Homo sapiens chromosome 5 clone RP11-152P24, complete sequence Length = 143970 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tcttcttcttttccctctc 107 ||||||||||||||||||| Sbjct: 73081 tcttcttcttttccctctc 73063
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tcttcttcttttccctctc 107 ||||||||||||||||||| Sbjct: 1306471 tcttcttcttttccctctc 1306453
>gb|AC009987.17| Homo sapiens chromosome 10 clone RP11-391M7, complete sequence Length = 196808 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 gctctcttcttcttttccc 103 ||||||||||||||||||| Sbjct: 150627 gctctcttcttcttttccc 150609
>gb|AC097366.6| Genomic sequence for Mus musculus, clone RP23-81M23, from chromosome 17, complete sequence Length = 183518 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tcttcttcttttccctctc 107 ||||||||||||||||||| Sbjct: 144349 tcttcttcttttccctctc 144331
>gb|AC096687.5| Oryza sativa chromosome 3 BAC OSJNBa0010E04 genomic sequence, complete sequence Length = 117505 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 81 ctctgctctcttcttcttt 99 ||||||||||||||||||| Sbjct: 51203 ctctgctctcttcttcttt 51221
>gb|AC012504.7| Homo sapiens BAC clone RP11-469O11 from 4, complete sequence Length = 205886 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 77 atctctctgctctcttctt 95 ||||||||||||||||||| Sbjct: 77470 atctctctgctctcttctt 77452
>gb|AC087667.4| Homo sapiens chromosome 8, clone RP11-65D17, complete sequence Length = 172613 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 tctgctctcttcttctttt 100 ||||||||||||||||||| Sbjct: 83507 tctgctctcttcttctttt 83525
>gb|AC012568.7| Homo sapiens chromosome 15, clone RP11-342M21, complete sequence Length = 166785 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 71 tctccaatctctctgctct 89 ||||||||||||||||||| Sbjct: 112449 tctccaatctctctgctct 112467
>gb|AC084272.41| Mus musculus strain C57BL/6J clone rp23-11g21 map 3, complete sequence Length = 206230 Score = 38.2 bits (19), Expect = 8.3 Identities = 28/31 (90%) Strand = Plus / Plus Query: 77 atctctctgctctcttcttcttttccctctc 107 |||||||| |||||||||||| ||| ||||| Sbjct: 75181 atctctctcctctcttcttctcttctctctc 75211
>gb|AC153361.5| Mus musculus BAC clone RP23-291L20 from chromosome 10, complete sequence Length = 212761 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 81 ctctgctctcttcttcttt 99 ||||||||||||||||||| Sbjct: 97787 ctctgctctcttcttcttt 97805
>emb|BX539325.9| Zebrafish DNA sequence from clone CH211-253B18 in linkage group 3, complete sequence Length = 183783 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 80 tctctgctctcttcttctt 98 ||||||||||||||||||| Sbjct: 40977 tctctgctctcttcttctt 40995
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 ctctgctctcttcttcttt 99 ||||||||||||||||||| Sbjct: 34565036 ctctgctctcttcttcttt 34565018
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctcttcttcttttccctct 106 ||||||||||||||||||| Sbjct: 42234923 ctcttcttcttttccctct 42234905
>emb|BX818022.1|CNS0AAQD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL57ZA01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 973 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 78 tctctctgctctcttcttc 96 ||||||||||||||||||| Sbjct: 293 tctctctgctctcttcttc 311
>emb|BX823038.1|CNS0A63R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB82ZG10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1390 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 tctctgctctcttcttctt 98 ||||||||||||||||||| Sbjct: 97 tctctgctctcttcttctt 79
>emb|BX822383.1|CNS0A62D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB32ZH05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1369 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 tctctgctctcttcttctt 98 ||||||||||||||||||| Sbjct: 104 tctctgctctcttcttctt 86
>gb|AC017007.9| Homo sapiens BAC clone RP11-119H12 from 4, complete sequence Length = 182805 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 tcttcttcttttccctctc 107 ||||||||||||||||||| Sbjct: 37233 tcttcttcttttccctctc 37215
>gb|AC146077.4| Pan troglodytes BAC clone RP43-45A15 from chromosome 7, complete sequence Length = 188174 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 aatctctctgctctcttct 94 ||||||||||||||||||| Sbjct: 106075 aatctctctgctctcttct 106057
>gb|AF324890.1|AF324889S2 Homo sapiens myosin phosphatase target subunit 2 (MYPT2) gene, exons 2 and 3 Length = 51730 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 84 tgctctcttcttcttttcc 102 ||||||||||||||||||| Sbjct: 5440 tgctctcttcttcttttcc 5458
>gb|AC019184.3| Homo sapiens BAC clone RP11-298E6 from 2, complete sequence Length = 194372 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 82 tctgctctcttcttcttttccct 104 ||||||||||| ||||||||||| Sbjct: 110927 tctgctctctttttcttttccct 110949
>gb|AC084681.1|CBRG47N22 Caenorhabditis briggsae cosmid G47N22, complete sequence Length = 44926 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 tctctctgctctcttcttctttt 100 |||| |||||||||||||||||| Sbjct: 40457 tctcgctgctctcttcttctttt 40479
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0401G10 Length = 160704 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctcttcttcttttccctct 106 ||||||||||||||||||| Sbjct: 6880 ctcttcttcttttccctct 6862
>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1294_F06 Length = 121088 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctcttcttcttttccctct 106 ||||||||||||||||||| Sbjct: 108121 ctcttcttcttttccctct 108103
>gb|BT004772.1| Arabidopsis thaliana At1g09330 gene, complete cds Length = 561 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 78 tctctctgctctcttcttc 96 ||||||||||||||||||| Sbjct: 105 tctctctgctctcttcttc 123
>gb|AC013734.4|AC013734 Homo sapiens BAC clone RP11-557B9 from Y, complete sequence Length = 180019 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 tgctctcttcttcttttcc 102 ||||||||||||||||||| Sbjct: 42241 tgctctcttcttcttttcc 42223
>gb|AY087712.1| Arabidopsis thaliana clone 37855 mRNA, complete sequence Length = 1393 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 tctctgctctcttcttctt 98 ||||||||||||||||||| Sbjct: 88 tctctgctctcttcttctt 70
>gb|AY085379.1| Arabidopsis thaliana clone 14886 mRNA, complete sequence Length = 935 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 78 tctctctgctctcttcttc 96 ||||||||||||||||||| Sbjct: 263 tctctctgctctcttcttc 281
>gb|BT003007.1| Arabidopsis thaliana clone U19136 putative FRO1 and FRO2 protein (At5g50160) mRNA, complete cds Length = 2218 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 ctctcttcttcttttccct 104 ||||||||||||||||||| Sbjct: 501 ctctcttcttcttttccct 519
>gb|AC127287.4| Mus musculus BAC clone RP23-345G7 from chromosome 7, complete sequence Length = 209901 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 ctctcttcttcttttccct 104 ||||||||||||||||||| Sbjct: 50579 ctctcttcttcttttccct 50597
>dbj|AK117365.1| Arabidopsis thaliana At3g55350 mRNA for unknown protein, complete cds, clone: RAFL16-93-J07 Length = 1537 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 tctctgctctcttcttctt 98 ||||||||||||||||||| Sbjct: 191 tctctgctctcttcttctt 173
>dbj|AB024031.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K6A12 Length = 64136 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 ctctcttcttcttttccct 104 ||||||||||||||||||| Sbjct: 11302 ctctcttcttcttttccct 11320
>dbj|AK121241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023097P14, full insert sequence Length = 2050 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctcttcttcttttccctct 106 ||||||||||||||||||| Sbjct: 688 ctcttcttcttttccctct 670
>dbj|AK106256.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-E11, full insert sequence Length = 1709 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctcttcttcttttccctct 106 ||||||||||||||||||| Sbjct: 720 ctcttcttcttttccctct 702
>dbj|AK066987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093H11, full insert sequence Length = 2202 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 88 ctcttcttcttttccctct 106 ||||||||||||||||||| Sbjct: 709 ctcttcttcttttccctct 691
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 38.2 bits (19), Expect = 8.3 Identities = 25/27 (92%) Strand = Plus / Plus Query: 71 tctccaatctctctgctctcttcttct 97 |||||| |||||||||||||| ||||| Sbjct: 1629272 tctccattctctctgctctctccttct 1629298
>emb|BX247907.8| Zebrafish DNA sequence from clone CH211-232D19 in linkage group 8, complete sequence Length = 169530 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 ctctcttcttcttttccct 104 ||||||||||||||||||| Sbjct: 50715 ctctcttcttcttttccct 50697
>emb|BX510342.7| Zebrafish DNA sequence from clone DKEY-15I15 in linkage group 2, complete sequence Length = 186711 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 69 cgtctccaatctctctgctctct 91 ||||| ||||||||||||||||| Sbjct: 145429 cgtcttcaatctctctgctctct 145451
>gb|AC155272.3| Mus musculus BAC clone RP23-79N13 from chromosome 13, complete sequence Length = 213306 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 tctctgctctcttcttctt 98 ||||||||||||||||||| Sbjct: 9621 tctctgctctcttcttctt 9603
>gb|AC006416.2|T31J12 Arabidopsis thaliana chromosome 1 BAC T31J12 sequence, complete sequence Length = 16549 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 78 tctctctgctctcttcttc 96 ||||||||||||||||||| Sbjct: 12357 tctctctgctctcttcttc 12339
>emb|CT030195.12| Mouse DNA sequence from clone RP23-191J8 on chromosome 13, complete sequence Length = 219800 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 tctctgctctcttcttctt 98 ||||||||||||||||||| Sbjct: 174704 tctctgctctcttcttctt 174686
>emb|AL732467.8| Mouse DNA sequence from clone RP23-147L14 on chromosome 2, complete sequence Length = 229048 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 gctctcttcttcttttccc 103 ||||||||||||||||||| Sbjct: 148813 gctctcttcttcttttccc 148795
>dbj|AP002847.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1742H10 Length = 155723 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 87 tctcttcttcttttccctc 105 ||||||||||||||||||| Sbjct: 94195 tctcttcttcttttccctc 94177
>emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa0054O08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167806 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 agggataagtgcttccatc 38 ||||||||||||||||||| Sbjct: 71560 agggataagtgcttccatc 71578
>emb|AL157375.6| Human DNA sequence from clone RP1-133P16 on chromosome 6 Contains the ARF1 (ADP-ribosylation factor 1) gene, ESTs, STSs and GSSs, complete sequence Length = 65763 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 aatctctctgctctcttct 94 ||||||||||||||||||| Sbjct: 44998 aatctctctgctctcttct 45016
>emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, BAC clone T22E16 Length = 103240 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 tctctgctctcttcttctt 98 ||||||||||||||||||| Sbjct: 1034 tctctgctctcttcttctt 1016
>gb|AC138307.2| Mus musculus BAC clone RP24-159M5 from 12, complete sequence Length = 165732 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 atctctctgctctcttctt 95 ||||||||||||||||||| Sbjct: 101387 atctctctgctctcttctt 101405
>gb|AC113317.8| Mus musculus chromosome 5, clone RP23-442G8, complete sequence Length = 193961 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 89 tcttcttcttttccctctc 107 ||||||||||||||||||| Sbjct: 47016 tcttcttcttttccctctc 47034
>gb|AC138459.3| Mus musculus BAC clone RP23-335K20 from 10, complete sequence Length = 222461 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 ctctgctctcttcttcttt 99 ||||||||||||||||||| Sbjct: 37436 ctctgctctcttcttcttt 37418
>gb|AC154247.2| Mus musculus BAC clone RP24-176G22 from chromosome 17, complete sequence Length = 162175 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 82 tctgctctcttcttctttt 100 ||||||||||||||||||| Sbjct: 85971 tctgctctcttcttctttt 85953
>emb|AL844903.11| Mouse DNA sequence from clone RP23-197C2 on chromosome 2, complete sequence Length = 123851 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 89 tcttcttcttttccctctc 107 ||||||||||||||||||| Sbjct: 104836 tcttcttcttttccctctc 104854
>emb|AL645563.12| Mouse DNA sequence from clone RP23-132L14 on chromosome 4, complete sequence Length = 214456 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 114 ttccttaagaagttccttg 132 ||||||||||||||||||| Sbjct: 152849 ttccttaagaagttccttg 152867 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,600,058 Number of Sequences: 3902068 Number of extensions: 1600058 Number of successful extensions: 142370 Number of sequences better than 10.0: 140 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 141403 Number of HSP's gapped (non-prelim): 967 length of query: 171 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 149 effective length of database: 17,147,199,772 effective search space: 2554932766028 effective search space used: 2554932766028 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)