| Clone Name | rbaal13m20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | HAP1_HAEIN (P44596) Adhesion and penetration protein precursor (... | 34 | 0.42 | 2 | STE3_YEAST (P06783) Pheromone a factor receptor | 30 | 4.6 |
|---|
>HAP1_HAEIN (P44596) Adhesion and penetration protein precursor (EC 3.4.21.-)| Length = 1409 Score = 33.9 bits (76), Expect = 0.42 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%) Frame = +2 Query: 143 GVQPSCLSTDC-RGEKAAMELCLTIVLRSTR*TNYFP*KWAQ-KINNRNRATVKVINALA 316 GV P+ +T C R + + C T+ L T+ N P IN N ATV + Sbjct: 705 GVVPNXQNTICTRSDWTGLTTCKTVNLTDTKVINSIPITQINGSINLTNNATVNIHGLAK 764 Query: 317 TRTHVTAPDHSSSSMKQNSEE 379 +VT DHS ++ N+ + Sbjct: 765 LNGNVTLIDHSQFTLSNNATQ 785
>STE3_YEAST (P06783) Pheromone a factor receptor| Length = 470 Score = 30.4 bits (67), Expect = 4.6 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = +1 Query: 82 RIFNYCLSRFSSALNLLTAAWRTTVLF 162 ++F Y ++R++ NLL+ W TTVL+ Sbjct: 135 QVFRYGIARYNGCQNLLSPTWITTVLY 161 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,923,822 Number of Sequences: 219361 Number of extensions: 1702883 Number of successful extensions: 4037 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3907 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4035 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)