ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal13m10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106321.1| Zea mays PCO088178 mRNA sequence Length = 748 Score = 335 bits (169), Expect = 1e-88 Identities = 265/297 (89%) Strand = Plus / Minus Query: 133 tatcttcctagattgtcaacttgccttggctcccctcttgtgtctttcttgcaaactttg 192 ||||||||||| |||||||| ||||| |||||||| |||||||| |||||||| | ||| Sbjct: 444 tatcttcctagcttgtcaacctgcctcggctccccccttgtgtccttcttgcagatcttg 385 Query: 193 caggtcttgtccacccaaccttcctccacgtattcgccatcaacttcaacatatgacttg 252 ||||||||||| |||||||| ||||||||||||| || || |||||||||||||||||| Sbjct: 384 caggtcttgtcgacccaaccctcctccacgtattgcccgtcgacttcaacatatgacttg 325 Query: 253 aagaaatccttgtaggtgccaccaatcttcctccgaagcgctgcatactgttcccttgtc 312 |||||||||| |||||||||||||||||||| || ||| ||| | ||||| ||||| ||| Sbjct: 324 aagaaatcctggtaggtgccaccaatcttccgcctaagtgctccgtactgctccctcgtc 265 Query: 313 atcctcccttcatctttgatggaatccctggcctcgtacagcagctccgcgtccttctcc 372 ||||||||| || || || |||| ||||||||||||||||||||||| |||||||||||| Sbjct: 264 atcctccctccacctctggtggactccctggcctcgtacagcagctcggcgtccttctcc 205 Query: 373 gaccggacctgcgagaagtccagcgcctcggtgatgttcccaaacagggactgcttg 429 |||||||||||||||||||||||||||||||||||| | || || |||||||||||| Sbjct: 204 gaccggacctgcgagaagtccagcgcctcggtgatgcttccgaagagggactgcttg 148
>ref|NM_190383.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 513 Score = 329 bits (166), Expect = 6e-87 Identities = 265/298 (88%) Strand = Plus / Minus Query: 132 atatcttcctagattgtcaacttgccttggctcccctcttgtgtctttcttgcaaacttt 191 |||||||||||| ||||| || ||||| || |||||||| ||||| |||||||||||||| Sbjct: 447 atatcttcctagcttgtcgacctgcctgggttcccctctagtgtccttcttgcaaacttt 388 Query: 192 gcaggtcttgtccacccaaccttcctccacgtattcgccatcaacttcaacatatgactt 251 ||||||||| ||||||||||||||||| |||||||| || ||||| || ||||||||||| Sbjct: 387 gcaggtcttatccacccaaccttcctctacgtattccccgtcaacatccacatatgactt 328 Query: 252 gaagaaatccttgtaggtgccaccaatcttcctccgaagcgctgcatactgttcccttgt 311 |||||||||||||||||||||||| |||||||||||||| ||| ||||||| ||| |||| Sbjct: 327 gaagaaatccttgtaggtgccaccgatcttcctccgaagtgctccatactgctcctttgt 268 Query: 312 catcctcccttcatctttgatggaatccctggcctcgtacagcagctccgcgtccttctc 371 |||||| ||| |||| || ||| || ||||| || ||||| ||||||||||||||||| Sbjct: 267 catccttcctccatcctttgtggcctctctggcttcatacagaagctccgcgtccttctc 208 Query: 372 cgaccggacctgcgagaagtccagcgcctcggtgatgttcccaaacagggactgcttg 429 ||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||| Sbjct: 207 cgaccggacctgcgagaagtccagcgcctcggtgatgctcccgaacaatgactgcttg 150
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 127 bits (64), Expect = 5e-26 Identities = 160/192 (83%) Strand = Plus / Minus Query: 46 tttgatggtacaaaagaagttcatctgccgaagagtttggaaaagaagtttgttggtttc 105 |||||| |||||| |||||||||||| |||| | ||||| |||| ||| || ||||| Sbjct: 35169590 tttgattgtacaattgaagttcatctggcgaacaatttggcgaagatgttggtcggtttt 35169531 Query: 106 gagttctctgcgcacgccacatgcatatatcttcctagattgtcaacttgccttggctcc 165 | |||||| ||| || ||||| |||||||||||| ||||| || ||||| || ||| Sbjct: 35169530 gggttctccaagcatgcgacatgtgcatatcttcctagcttgtcgacctgcctgggttcc 35169471 Query: 166 cctcttgtgtctttcttgcaaactttgcaggtcttgtccacccaaccttcctccacgtat 225 ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 35169470 cctctagtgtccttcttgcaaactttgcaggtcttatccacccaaccttcctctacgtat 35169411 Query: 226 tcgccatcaact 237 || || |||||| Sbjct: 35169410 tccccgtcaact 35169399 Score = 123 bits (62), Expect = 7e-25 Identities = 83/90 (92%) Strand = Plus / Minus Query: 340 ctggcctcgtacagcagctccgcgtccttctccgaccggacctgcgagaagtccagcgcc 399 ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35169049 ctggcttcatacagaagctccgcgtccttctccgaccggacctgcgagaagtccagcgcc 35168990 Query: 400 tcggtgatgttcccaaacagggactgcttg 429 ||||||||| |||| |||| ||||||||| Sbjct: 35168989 tcggtgatgctcccgaacaatgactgcttg 35168960 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 241 acatatgacttgaagaaatccttgtaggtgccaccaatcttcctccgaagcgctgcatac 300 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| Sbjct: 35169282 acatatgacttgaagaaatccttgtaggtgccaccgatcttcctccgaagtgctccatac 35169223 Query: 301 t 301 | Sbjct: 35169222 t 35169222 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 caccttcttctccccctcctcctc 455 ||||||||||||| |||||||||| Sbjct: 12717030 caccttcttctcctcctcctcctc 12717053
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 127 bits (64), Expect = 5e-26 Identities = 160/192 (83%) Strand = Plus / Minus Query: 46 tttgatggtacaaaagaagttcatctgccgaagagtttggaaaagaagtttgttggtttc 105 |||||| |||||| |||||||||||| |||| | ||||| |||| ||| || ||||| Sbjct: 48674 tttgattgtacaattgaagttcatctggcgaacaatttggcgaagatgttggtcggtttt 48615 Query: 106 gagttctctgcgcacgccacatgcatatatcttcctagattgtcaacttgccttggctcc 165 | |||||| ||| || ||||| |||||||||||| ||||| || ||||| || ||| Sbjct: 48614 gggttctccaagcatgcgacatgtgcatatcttcctagcttgtcgacctgcctgggttcc 48555 Query: 166 cctcttgtgtctttcttgcaaactttgcaggtcttgtccacccaaccttcctccacgtat 225 ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 48554 cctctagtgtccttcttgcaaactttgcaggtcttatccacccaaccttcctctacgtat 48495 Query: 226 tcgccatcaact 237 || || |||||| Sbjct: 48494 tccccgtcaact 48483 Score = 123 bits (62), Expect = 7e-25 Identities = 83/90 (92%) Strand = Plus / Minus Query: 340 ctggcctcgtacagcagctccgcgtccttctccgaccggacctgcgagaagtccagcgcc 399 ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48133 ctggcttcatacagaagctccgcgtccttctccgaccggacctgcgagaagtccagcgcc 48074 Query: 400 tcggtgatgttcccaaacagggactgcttg 429 ||||||||| |||| |||| ||||||||| Sbjct: 48073 tcggtgatgctcccgaacaatgactgcttg 48044 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 241 acatatgacttgaagaaatccttgtaggtgccaccaatcttcctccgaagcgctgcatac 300 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| Sbjct: 48366 acatatgacttgaagaaatccttgtaggtgccaccgatcttcctccgaagtgctccatac 48307 Query: 301 t 301 | Sbjct: 48306 t 48306
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 436 ttcttctccccctcctcctcatct 459 |||||||||||||||||||||||| Sbjct: 1900642 ttcttctccccctcctcctcatct 1900619
>gb|AC122147.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0072F04, complete sequence Length = 137724 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 436 ttcttctccccctcctcctcatct 459 |||||||||||||||||||||||| Sbjct: 119095 ttcttctccccctcctcctcatct 119072
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 436 ttcttctccccctcctcctcatct 459 |||||||||||||||||||||||| Sbjct: 1900642 ttcttctccccctcctcctcatct 1900619
>gb|AC153944.3| Mus musculus 10 BAC RP24-292A13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 139203 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 432 caccttcttctccccctcctcctc 455 |||||||||||||||||||||||| Sbjct: 104005 caccttcttctccccctcctcctc 103982
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 436 ttcttctccccctcctcctcatct 459 |||||||||||||||||||||||| Sbjct: 1900593 ttcttctccccctcctcctcatct 1900570
>ref|XM_324096.1| Neurospora crassa OR74A predicted protein (NCU04740.1) partial mRNA Length = 1305 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 70 ctgccgaagagtttggaaaagaagtttgttg 100 |||||||||||| ||||| |||||||||||| Sbjct: 706 ctgccgaagagtatggaagagaagtttgttg 736
>ref|XM_955282.1| Neurospora crassa OR74A hypothetical protein (NCU04740.1) partial mRNA Length = 1305 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 70 ctgccgaagagtttggaaaagaagtttgttg 100 |||||||||||| ||||| |||||||||||| Sbjct: 706 ctgccgaagagtatggaagagaagtttgttg 736
>emb|AL512594.7| Human DNA sequence from clone RP11-549A6 on chromosome 9 Contains a pseudogene similar to part of a GTPase-activating protein, complete sequence Length = 166192 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 416 acagggactgcttgggcaccttcttctcccc 446 |||||||||||||| ||||||||||||||| Sbjct: 84334 acagggactgcttgctcaccttcttctcccc 84304
>emb|BX897676.1| Neurospora crassa DNA linkage group VI BAC clone B8I24 Length = 83591 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 70 ctgccgaagagtttggaaaagaagtttgttg 100 |||||||||||| ||||| |||||||||||| Sbjct: 73296 ctgccgaagagtatggaagagaagtttgttg 73326
>emb|CR513786.5| Zebrafish DNA sequence from clone CH211-92F19 in linkage group 14, complete sequence Length = 97391 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatctgctttc 465 |||||||||| |||||||||||||| ||||| Sbjct: 47547 cttcttctcctcctcctcctcatctcctttc 47517
>gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosome 12, complete sequence Length = 222209 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 468 ataagccctgactgacctagtag 490 ||||||||||||||||||||||| Sbjct: 53235 ataagccctgactgacctagtag 53257
>emb|AL596265.12| Mouse DNA sequence from clone RP23-134O19 on chromosome 12, complete sequence Length = 205332 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcctcatctgc 461 ||||||||||||||||||||| ||||| Sbjct: 76131 cttcttctccccctcctcctcttctgc 76157
>gb|AC127582.4| Mus musculus BAC clone RP24-89J3 from 12, complete sequence Length = 217949 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 468 ataagccctgactgacctagtag 490 ||||||||||||||||||||||| Sbjct: 54523 ataagccctgactgacctagtag 54501
>gb|AC090426.1| Homo sapiens chromosome 17 clone 205m17 map 17q21.1, complete sequence Length = 138999 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctc 455 |||||||||||||||||||||| Sbjct: 65097 ccttcttctccccctcctcctc 65076
>gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, complete sequence Length = 205378 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctc 455 |||||||||||||||||||||| Sbjct: 185456 ccttcttctccccctcctcctc 185435
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 aaatgaggagctctgggtaggg 558 |||||||||||||||||||||| Sbjct: 3767626 aaatgaggagctctgggtaggg 3767647
>gb|AC154385.2| Mus musculus BAC clone RP23-23O22 from chromosome 17, complete sequence Length = 221564 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatctgcttt 464 ||||||||||||||||||||| ||| |||| Sbjct: 40721 cttcttctccccctcctcctcctcttcttt 40692
>gb|AC165245.2| Mus musculus BAC clone RP24-376N22 from chromosome 9, complete sequence Length = 217074 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctc 455 |||||||||||||||||||||| Sbjct: 134177 ccttcttctccccctcctcctc 134156
>gb|AC134243.3| Mus musculus BAC clone RP24-90E15 from chromosome 17, complete sequence Length = 193151 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatctgcttt 464 ||||||||||||||||||||| ||| |||| Sbjct: 154855 cttcttctccccctcctcctcctcttcttt 154826
>gb|AC117229.3| Mus musculus BAC clone RP23-380M1 from chromosome 2, complete sequence Length = 187221 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 84 ggaaaagaagtttgttggtttc 105 |||||||||||||||||||||| Sbjct: 101998 ggaaaagaagtttgttggtttc 102019
>gb|AC111044.9| Mus musculus chromosome 10, clone RP23-299H4, complete sequence Length = 165614 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 434 ccttcttctccccctcctcctc 455 |||||||||||||||||||||| Sbjct: 135652 ccttcttctccccctcctcctc 135673
>gb|AC080112.15| Homo sapiens chromosome 17, clone CTD-2267D19, complete sequence Length = 175014 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctc 455 |||||||||||||||||||||| Sbjct: 49022 ccttcttctccccctcctcctc 49001
>gb|AC018629.12| Homo sapiens chromosome 17, clone RP11-58O9, complete sequence Length = 166234 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 434 ccttcttctccccctcctcctc 455 |||||||||||||||||||||| Sbjct: 29724 ccttcttctccccctcctcctc 29745
>gb|AC164004.3| Mus musculus chromosome 5, clone RP23-58C20, complete sequence Length = 198872 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 434 ccttcttctccccctcctcctc 455 |||||||||||||||||||||| Sbjct: 60360 ccttcttctccccctcctcctc 60381
>emb|AL713994.15| Mouse DNA sequence from clone RP23-378H5 on chromosome 11 Contains the 5' end of the Arf-1 gene for ADP-ribosylation factor 1, the Wnt3a gene for wingless-related MMTV integration site 3A, the Wnt9a gene for wingless-type MMTV integration site 9A, two novel genes, the 5' end of a novel gene and five CpG islands, complete sequence Length = 225396 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctc 455 |||||||||||||||||||||| Sbjct: 165079 ccttcttctccccctcctcctc 165058
>gb|AC011558.6| Homo sapiens chromosome 19 clone LLNLR-291F12, complete sequence Length = 43128 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctc 455 |||||||||||||||||||||| Sbjct: 25632 ccttcttctccccctcctcctc 25611
>gb|AC079223.11| Mus musculus chromosome 1, clone RP22-318M10, complete sequence Length = 137729 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctc 455 |||||||||||||||||||||| Sbjct: 15640 ccttcttctccccctcctcctc 15619
>gb|AC155654.16| Mus musculus 6 BAC RP24-192P21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 147486 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 434 ccttcttctccccctcctcctcatct 459 ||||||||||| |||||||||||||| Sbjct: 67300 ccttcttctcctcctcctcctcatct 67325
>gb|AC151294.3| Mus musculus BAC clone RP23-137I7 from chromosome 17, complete sequence Length = 206868 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 438 cttctccccctcctcctcatct 459 |||||||||||||||||||||| Sbjct: 92149 cttctccccctcctcctcatct 92128
>gb|AC127372.3| Mus musculus BAC clone RP23-37F11 from chromosome 8, complete sequence Length = 175472 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 434 ccttcttctccccctcctcctc 455 |||||||||||||||||||||| Sbjct: 151541 ccttcttctccccctcctcctc 151562
>emb|AL928798.20| Mouse DNA sequence from clone RP23-7A19 on chromosome 2, complete sequence Length = 192734 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 ggaaaagaagtttgttggtttc 105 |||||||||||||||||||||| Sbjct: 23543 ggaaaagaagtttgttggtttc 23522
>gb|AC153915.5| Mus musculus 10 BAC RP23-329D23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207169 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctcatct 459 ||||||||||| |||||||||||||| Sbjct: 206278 ccttcttctcctcctcctcctcatct 206253
>gb|AC140277.3| Mus musculus BAC clone RP23-336O18 from 5, complete sequence Length = 198919 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 434 ccttcttctccccctcctcctc 455 |||||||||||||||||||||| Sbjct: 190043 ccttcttctccccctcctcctc 190064
>gb|AC147085.3| Mus musculus BAC clone RP23-356J12 from 8, complete sequence Length = 209306 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctc 455 |||||||||||||||||||||| Sbjct: 149451 ccttcttctccccctcctcctc 149430
>emb|CT009732.8| Mouse DNA sequence from clone RP23-72O20 on chromosome 9, complete sequence Length = 239257 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctc 455 |||||||||||||||||||||| Sbjct: 54205 ccttcttctccccctcctcctc 54184
>gb|AC158559.7| Mus musculus chromosome 1, clone RP24-300L5, complete sequence Length = 169324 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctc 455 |||||||||||||||||||||| Sbjct: 36730 ccttcttctccccctcctcctc 36709
>gb|AC102343.8| Mus musculus chromosome 3, clone RP23-254H18, complete sequence Length = 220876 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 163016 cttcttctccccctcctcctc 163036
>gb|AC121832.3| Mus musculus chromosome 10 clone RP24-67D23, complete sequence Length = 172348 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 3731 cttcttctccccctcctcctc 3711
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctcatc 458 |||| |||||||||||||||||||| Sbjct: 795870 ccttgttctccccctcctcctcatc 795846
>gb|AC163676.4| Mus musculus BAC clone RP24-81A22 from chromosome 3, complete sequence Length = 223760 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 130100 cttcttctccccctcctcctc 130120
>gb|AC131593.16| Mus musculus chromosome 3, clone RP24-566M9, complete sequence Length = 143352 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 24742 cttcttctccccctcctcctc 24762
>gb|AC139211.13| Mus musculus chromosome 6, clone RP23-302O24, complete sequence Length = 154129 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 ccctcctcctcatctgctttc 465 ||||||||||||||||||||| Sbjct: 59242 ccctcctcctcatctgctttc 59222
>gb|AC101559.20| Mus musculus chromosome 5, clone RP23-194K16, complete sequence Length = 252554 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 194063 cttcttctccccctcctcctc 194083
>gb|AC155946.7| Mus musculus 6 BAC RP24-483K3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 178502 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 162548 cttcttctccccctcctcctc 162568
>gb|AC165238.5| Mus musculus chromosome 3, clone RP23-466A3, complete sequence Length = 180939 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 143092 cttcttctccccctcctcctc 143072
>gb|BC039276.1| Mus musculus pleckstrin homology domain containing, family F (with FYVE domain) member 2, mRNA (cDNA clone MGC:36376 IMAGE:4987735), complete cds Length = 2892 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 cccttcatctttgatggaatc 338 ||||||||||||||||||||| Sbjct: 474 cccttcatctttgatggaatc 454
>gb|AC138548.8| Mus musculus chromosome 3, clone RP24-210N9, complete sequence Length = 155964 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 54422 cttcttctccccctcctcctc 54402
>ref|XM_382069.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein (FG01893.1) partial mRNA Length = 2478 Score = 42.1 bits (21), Expect = 2.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 434 ccttcttctcc-ccctcctcctcatctgc 461 ||||||||||| ||||||||||||||||| Sbjct: 635 ccttcttctccaccctcctcctcatctgc 607
>gb|AC127248.3| Mus musculus BAC clone RP24-442E2 from chromosome 5, complete sequence Length = 176488 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 115285 cttcttctccccctcctcctc 115265
>ref|XM_567746.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNK02720) partial mRNA Length = 4178 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctcatc 458 |||| |||||||||||||||||||| Sbjct: 1557 ccttgttctccccctcctcctcatc 1533
>gb|AC124400.4| Mus musculus BAC clone RP24-357O21 from chromosome 14, complete sequence Length = 191219 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 cccttcatctttgatggaatc 338 ||||||||||||||||||||| Sbjct: 90782 cccttcatctttgatggaatc 90762
>gb|AC122879.3| Mus musculus BAC clone RP23-76C10 from 1, complete sequence Length = 250884 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 234660 cttcttctccccctcctcctc 234680
>gb|AC164704.4| Mus musculus BAC clone RP23-238D20 from chromosome 6, complete sequence Length = 189119 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 gggtaggggaaagagcgagag 571 ||||||||||||||||||||| Sbjct: 131719 gggtaggggaaagagcgagag 131699
>gb|AC159816.2| Mus musculus BAC clone RP23-321A19 from chromosome 9, complete sequence Length = 191274 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 106070 cttcttctccccctcctcctc 106050
>emb|AL590302.6| Human DNA sequence from clone RP11-252P19 on chromosome 6 Contains 2 novel genes and 3 CpG islands, complete sequence Length = 105898 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctcatc 458 ||||||||||| ||||||||||||| Sbjct: 6996 ccttcttctcctcctcctcctcatc 6972
>emb|AL445650.9| Human DNA sequence from clone RP11-152K20 on chromosome 1 Contains the 5' end of the USH2A gene for Usher syndrome 2A (autosomal recessive, mild) and the 3' end of the ESRRG gene for estrogen-related receptor gamma, complete sequence Length = 153705 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 80432 cttcttctccccctcctcctc 80412
>gb|BC040216.1| Mus musculus dynein heavy chain-related, mRNA (cDNA clone IMAGE:5363263), with apparent retained intron Length = 5542 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 5341 cttcttctccccctcctcctc 5321
>emb|AL805940.7| Mouse DNA sequence from clone RP24-286B19 on chromosome 4, complete sequence Length = 128829 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 89215 cttcttctccccctcctcctc 89195
>gb|BC016134.1| Mus musculus pleckstrin homology domain containing, family F (with FYVE domain) member 2, mRNA (cDNA clone MGC:28979 IMAGE:4503757), complete cds Length = 2897 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 cccttcatctttgatggaatc 338 ||||||||||||||||||||| Sbjct: 464 cccttcatctttgatggaatc 444
>gb|AC073358.14| Homo sapiens 3 BAC RP11-501M7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164078 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 ccttcttctccccctcctcct 454 ||||||||||||||||||||| Sbjct: 82710 ccttcttctccccctcctcct 82730
>dbj|AK154634.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630101M03 product:pleckstrin homology domain containing, family F (with FYVE domain) member 2, full insert sequence Length = 1964 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 cccttcatctttgatggaatc 338 ||||||||||||||||||||| Sbjct: 514 cccttcatctttgatggaatc 494
>emb|AL512584.13| Mouse DNA sequence from clone RP23-232D1 on chromosome 2, complete sequence Length = 141386 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 5517 cttcttctccccctcctcctc 5537
>gb|AC125310.5| Mus musculus BAC clone RP24-548E5 from chromosome 1, complete sequence Length = 223534 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 217912 cttcttctccccctcctcctc 217892
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 gcgagaagtccagcgcctcgg 403 ||||||||||||||||||||| Sbjct: 1358714 gcgagaagtccagcgcctcgg 1358734
>dbj|AK033666.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130213H04 product:CDNA FLJ13187 FIS, CLONE NT2RP3004242, WEAKLY SIMILAR TO PUTATIVE RHO/RAC GUANINE NUCLEOTIDE EXCHANGE FACTOR (HYPOTHETICAL 27.8 KDA PROTEIN) homolog [Homo sapiens], full insert sequence Length = 2228 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 cccttcatctttgatggaatc 338 ||||||||||||||||||||| Sbjct: 517 cccttcatctttgatggaatc 497
>gb|AC158651.12| Mus musculus BAC RP24-68I7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 190089 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 63470 cttcttctccccctcctcctc 63490
>gb|AC132660.7| Homo sapiens 3 BAC RP11-482K2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 64263 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 51611 cttcttctccccctcctcctc 51631
>gb|AC138229.16| Mus musculus chromosome 1, clone RP23-399N18, complete sequence Length = 211732 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 130042 cttcttctccccctcctcctc 130062
>gb|AF089023.1|AF089023 Euphagus carolinus cytochrome b (cytb) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 888 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 cttgtccacccaaccttcctccacg 222 |||||||||| |||||||||||||| Sbjct: 463 cttgtccacctaaccttcctccacg 487
>gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, complete sequence Length = 240821 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 130504 cttcttctccccctcctcctc 130484
>emb|CT486006.6| Mouse DNA sequence from clone RP23-433C10 on chromosome 9, complete sequence Length = 208668 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 109319 cttcttctccccctcctcctc 109339
>emb|AL732497.15| Mouse DNA sequence from clone RP23-130H14 on chromosome 4, complete sequence Length = 208663 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 318 cccttcatctttgatggaatc 338 ||||||||||||||||||||| Sbjct: 86004 cccttcatctttgatggaatc 86024
>emb|AL844852.11| Mouse DNA sequence from clone RP23-260N23 on chromosome 2, complete sequence Length = 257676 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 246271 cttcttctccccctcctcctc 246251
>gb|AC144774.3| Mus musculus BAC clone RP24-128I18 from 6, complete sequence Length = 143838 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 551 gggtaggggaaagagcgagag 571 ||||||||||||||||||||| Sbjct: 131985 gggtaggggaaagagcgagag 132005
>gb|AC122486.4| Mus musculus BAC clone RP24-380B9 from 12, complete sequence Length = 128253 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 ccttcttctccccctcctcct 454 ||||||||||||||||||||| Sbjct: 96359 ccttcttctccccctcctcct 96379
>ref|NM_175175.3| Mus musculus pleckstrin homology domain containing, family F (with FYVE domain) member 2 (Plekhf2), mRNA Length = 2897 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 cccttcatctttgatggaatc 338 ||||||||||||||||||||| Sbjct: 464 cccttcatctttgatggaatc 444
>gb|AC164643.4| Mus musculus BAC clone RP23-254F23 from chromosome 7, complete sequence Length = 232098 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 117199 cttcttctccccctcctcctc 117219
>gb|AC165153.2| Mus musculus BAC clone RP23-359L1 from chromosome 17, complete sequence Length = 219548 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 40083 cttcttctccccctcctcctc 40063
>emb|AL627105.13| Mouse DNA sequence from clone RP23-383D12 on chromosome 4, complete sequence Length = 190882 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctc 455 ||||||||||||||||||||| Sbjct: 54699 cttcttctccccctcctcctc 54679
>emb|AL928738.8| Mouse DNA sequence from clone RP23-76M15 on chromosome 4, complete sequence Length = 188568 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 306 ccttgtcatcctcccttcatctttg 330 ||||||||||||| ||||||||||| Sbjct: 63456 ccttgtcatcctctcttcatctttg 63432
>gb|AC153581.18| Mus musculus 6 BAC RP23-111F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208262 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 cttctccccctcctcctcat 457 |||||||||||||||||||| Sbjct: 59369 cttctccccctcctcctcat 59388
>ref|NM_115487.3| Arabidopsis thaliana unknown protein AT3G56290 mRNA, complete cds Length = 753 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 199 ttgtccacccaaccttcctccacgtattcgccatcaacttcaac 242 ||||||||||| || |||||||| |||| ||||| |||||||| Sbjct: 416 ttgtccacccatccctcctccacatattgcccatccacttcaac 373
>gb|AC153156.1| Ornithorhynchus anatinus chromosome UNK clone OABb-289A1, complete sequence Length = 109794 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcctcatc 458 |||||||||||||||||| ||||| Sbjct: 33630 cttcttctccccctcctcttcatc 33653
>ref|XM_512314.1| PREDICTED: Pan troglodytes similar to general transcription factor IIF, polypeptide 1, 74kDa; general transcription factor IIF, polypeptide 1 (74kD subunit) (LOC455639), mRNA Length = 2391 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 428 tgggcaccttcttctccccctcctcctc 455 ||||| ||||||||||| |||||||||| Sbjct: 1744 tgggcgccttcttctcctcctcctcctc 1717
>ref|XM_471715.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcc 453 |||||||||||||||||||| Sbjct: 226 ccttcttctccccctcctcc 207
>gb|AY665795.1| Cynomys ludovicianus clone A115 microsatellite sequence Length = 690 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 tcccaaacagggactgcttg 429 |||||||||||||||||||| Sbjct: 605 tcccaaacagggactgcttg 624
>gb|AF030453.1| Homo sapiens chromosome 7 clone PAC 76h2 map 7q22, complete sequence Length = 125108 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 cacccaaccttcctccacgt 223 |||||||||||||||||||| Sbjct: 17040 cacccaaccttcctccacgt 17021
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 aaaagaagtttgttggtttc 105 |||||||||||||||||||| Sbjct: 1065995 aaaagaagtttgttggtttc 1065976
>gb|BT020716.1| Bos taurus general transcription factor IIF, polypeptide 1, 74kDa (GTF2F1), mRNA, complete cds Length = 1788 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 428 tgggcaccttcttctccccctcctcctc 455 ||||| ||||||||||| |||||||||| Sbjct: 1193 tgggcgccttcttctcctcctcctcctc 1166
>gb|AC003676.1| Homo sapiens chromosome 2, P1 clone 777H5 (LBNL H27), complete sequence Length = 86894 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ttcttctccccctcctcctc 455 |||||||||||||||||||| Sbjct: 71686 ttcttctccccctcctcctc 71667
>gb|AC113585.4| Trypanosoma brucei chromosome 5 clone RPCI93-27M3, complete sequence Length = 127380 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 aaaagaagtttgttggtttc 105 |||||||||||||||||||| Sbjct: 107996 aaaagaagtttgttggtttc 107977
>gb|AC094749.8| Rattus norvegicus 1 BAC CH230-5H10 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 77448 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcct 454 |||||||||||||||||||| Sbjct: 37773 cttcttctccccctcctcct 37792 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcct 454 |||||||||||||||||||| Sbjct: 37752 cttcttctccccctcctcct 37771
>gb|AC121292.9| Mus musculus chromosome 1, clone RP23-172B15, complete sequence Length = 193192 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccttcttctccccctcctcctcat 457 ||||||||||| |||||||||||| Sbjct: 122452 ccttcttctcctcctcctcctcat 122475
>ref|XM_594493.2| PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 1E subunit (CACNA1E), partial mRNA Length = 6542 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatc 458 |||||||||| ||||||||||||| Sbjct: 2836 cttcttctccacctcctcctcatc 2813
>ref|XM_601826.2| PREDICTED: Bos taurus similar to type IV alpha 6 collagen isoform A precursor (LOC523526), mRNA Length = 4990 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 ttgatggaatccctggcctc 347 |||||||||||||||||||| Sbjct: 4046 ttgatggaatccctggcctc 4065
>ref|XM_363197.1| Magnaporthe grisea 70-15 hypothetical protein (MG08781.4) partial cds Length = 567 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 cctggcctcgtacagcagct 358 |||||||||||||||||||| Sbjct: 204 cctggcctcgtacagcagct 223
>ref|XM_323481.1| Neurospora crassa OR74A hypothetical protein ( (AL513463) heat shock protein 80 [Neurospora crassa OR74A] ) (NCU04142.1) partial mRNA Length = 2118 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatc 458 |||||||||| ||||||||||||| Sbjct: 744 cttcttctcctcctcctcctcatc 721
>ref|XM_953179.1| Neurospora crassa OR74A hypothetical protein (NCU07578.1) partial mRNA Length = 1344 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 441 ctccccctcctcctcatctgcttt 464 ||||||||||||||| |||||||| Sbjct: 474 ctccccctcctcctcttctgcttt 497
>ref|XM_956205.1| Neurospora crassa OR74A hypothetical protein ( (AL513463) heat shock protein 80 [Neurospora crassa OR74A] ) (NCU04142.1) partial mRNA Length = 2118 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatc 458 |||||||||| ||||||||||||| Sbjct: 744 cttcttctcctcctcctcctcatc 721
>ref|XM_327863.1| Neurospora crassa OR74A hypothetical protein (NCU07578.1) partial mRNA Length = 1344 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 441 ctccccctcctcctcatctgcttt 464 ||||||||||||||| |||||||| Sbjct: 474 ctccccctcctcctcttctgcttt 497
>ref|NM_000721.2| Homo sapiens calcium channel, voltage-dependent, alpha 1E subunit (CACNA1E), mRNA Length = 9734 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatc 458 |||||||||| ||||||||||||| Sbjct: 3507 cttcttctccacctcctcctcatc 3484
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ttcttctccccctcctcctc 455 |||||||||||||||||||| Sbjct: 50306 ttcttctccccctcctcctc 50325
>gb|AC122282.5| Mus musculus BAC clone RP23-240B12 from chromosome 5, complete sequence Length = 227388 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcct 454 |||||||||||||||||||| Sbjct: 204817 cttcttctccccctcctcct 204798
>gb|AC158932.5| Mus musculus chromosome 3, clone RP24-338G13, complete sequence Length = 159429 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 432 caccttcttctccccctcctcctc 455 ||||||||||||| |||||||||| Sbjct: 79112 caccttcttctcctcctcctcctc 79089
>gb|AC162894.4| Mus musculus chromosome 3, clone RP23-326A24, complete sequence Length = 187598 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 432 caccttcttctccccctcctcctc 455 ||||||||||||| |||||||||| Sbjct: 120727 caccttcttctcctcctcctcctc 120704
>gb|AC121279.7| Mus musculus chromosome 3, clone RP23-4F17, complete sequence Length = 207763 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aacttcaacatatgacttga 253 |||||||||||||||||||| Sbjct: 7563 aacttcaacatatgacttga 7582
>gb|AC164091.3| Mus musculus BAC clone RP23-97M20 from chromosome 3, complete sequence Length = 218807 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 aaaagaagtttgttggtttc 105 |||||||||||||||||||| Sbjct: 101170 aaaagaagtttgttggtttc 101151
>gb|AC164701.4| Mus musculus BAC clone RP24-108J12 from chromosome 17, complete sequence Length = 184296 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatc 458 ||||| |||||||||||||||||| Sbjct: 62588 cttctcctccccctcctcctcatc 62565
>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078f20, complete sequence Length = 151042 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ttcttctccccctcctcctc 455 |||||||||||||||||||| Sbjct: 150142 ttcttctccccctcctcctc 150161
>gb|AC116593.4| Mus musculus BAC clone RP24-91C7 from chromosome 8, complete sequence Length = 174603 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ttcttctccccctcctcctc 455 |||||||||||||||||||| Sbjct: 30660 ttcttctccccctcctcctc 30679
>gb|AC005088.3| Homo sapiens BAC clone CTA-313A17 from 7, complete sequence Length = 158663 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 cacccaaccttcctccacgt 223 |||||||||||||||||||| Sbjct: 51969 cacccaaccttcctccacgt 51950
>gb|AC093734.3| Homo sapiens BAC clone RP11-16P10 from 7, complete sequence Length = 114085 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 ccttcttctccccctcctcc 453 |||||||||||||||||||| Sbjct: 12981 ccttcttctccccctcctcc 13000
>gb|AC114676.7| Mus musculus chromosome 5, clone RP24-211H1, complete sequence Length = 153903 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcct 454 |||||||||||||||||||| Sbjct: 109506 cttcttctccccctcctcct 109525
>gb|DQ483781.1| Gymnogyps californianus clone 204F microsatellite sequence Length = 583 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctcat 457 |||||| ||||||||||||||||| Sbjct: 257 ccttctcctccccctcctcctcat 234
>ref|XM_533935.2| PREDICTED: Canis familiaris similar to Transcription initiation factor IIF alpha subunit (TFIIF-alpha) (Transcription initiation factor RAP74) (General transcription factor IIF polypeptide 1 74 kDa subunit protein) (LOC476731), mRNA Length = 1896 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 428 tgggcaccttcttctccccctcctcctc 455 ||||| ||||||||||| |||||||||| Sbjct: 1294 tgggcgccttcttctcctcctcctcctc 1267
>ref|XM_820621.1| Trypanosoma brucei TREU927 clone RPCI93-27M3 50S ribosomal protein L2 (Tb927.5.3360) partial mRNA Length = 1236 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aaaagaagtttgttggtttc 105 |||||||||||||||||||| Sbjct: 596 aaaagaagtttgttggtttc 615
>gb|AC125528.4| Mus musculus BAC clone RP23-365I9 from chromosome 15, complete sequence Length = 197376 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 436 ttcttctccccctcctcctcatct 459 |||| ||||||||||||||||||| Sbjct: 90505 ttctcctccccctcctcctcatct 90482
>gb|AC122488.3| Mus musculus BAC clone RP24-383B2 from chromosome 17, complete sequence Length = 206003 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 caccttcttctccccctcctcctc 455 ||||||||||||| |||||||||| Sbjct: 3139 caccttcttctcctcctcctcctc 3162
>gb|AC125404.4| Mus musculus BAC clone RP23-10A1 from 12, complete sequence Length = 209092 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ttcttctccccctcctcctc 455 |||||||||||||||||||| Sbjct: 5747 ttcttctccccctcctcctc 5728
>gb|AC073886.4| Homo sapiens BAC clone RP11-101N13 from 7, complete sequence Length = 112568 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 caccttcttctccccctcctcctc 455 ||||||||||||| |||||||||| Sbjct: 38652 caccttcttctcctcctcctcctc 38675
>gb|AC011899.5| Homo sapiens BAC clone RP11-452C13 from 7, complete sequence Length = 214229 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 cttctccccctcctcctcat 457 |||||||||||||||||||| Sbjct: 169338 cttctccccctcctcctcat 169357
>gb|AC005998.3| Homo sapiens PAC clone RP4-622E21 from 7, complete sequence Length = 96556 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tcccctcttgtgtctttctt 182 |||||||||||||||||||| Sbjct: 25599 tcccctcttgtgtctttctt 25618
>gb|AC113524.9| Mus musculus chromosome 6, clone RP23-120I17, complete sequence Length = 216807 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 cttctccccctcctcctcat 457 |||||||||||||||||||| Sbjct: 126254 cttctccccctcctcctcat 126235
>gb|AC165343.3| Mus musculus BAC clone RP23-476C24 from chromosome 17, complete sequence Length = 190724 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 caccttcttctccccctcctcctc 455 ||||||||||||| |||||||||| Sbjct: 99387 caccttcttctcctcctcctcctc 99410
>gb|AC133425.3| Rattus norvegicus 7 BAC CH230-333I12 (Children's Hospital Oakland Research Institute) complete sequence Length = 64809 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcct 454 |||||||||||||||||||| Sbjct: 25626 cttcttctccccctcctcct 25645
>ref|XM_794857.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC577282 (LOC577282), mRNA Length = 465 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctcatctgctttc 465 ||||||||||||| |||||||| || |||||| Sbjct: 166 ccttcttctccccttcctcctcctccgctttc 135
>emb|AL590998.7| Human DNA sequence from clone RP4-677A15 on chromosome 1 Contains parrt of the CACNA1E gene for calcium channel voltage-dependent alpha 1E subunit, complete sequence Length = 102196 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatc 458 |||||||||| ||||||||||||| Sbjct: 75100 cttcttctccacctcctcctcatc 75077
>emb|AL359928.11| Human DNA sequence from clone RP11-80D19 on chromosome 1, complete sequence Length = 63855 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 tatatcttcctagattgtcaactt 154 |||||||||||| ||||||||||| Sbjct: 11370 tatatcttcctaaattgtcaactt 11393
>gb|AC119420.12| Mus musculus strain 129S6/SvEvTac clone rp22-121i21 map 11, complete sequence Length = 168186 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatc 458 |||||||||| ||||||||||||| Sbjct: 156661 cttcttctcctcctcctcctcatc 156638
>emb|AL078590.28|HSA557H15 Human DNA sequence from clone RP11-557H15 on chromosome 6q23.1-23.3 Contains three novel genes, the 3' part of a novel gene and a member A1 of family with sequence similarity 8 (FAM8A1) pseudogene, complete sequence Length = 195021 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ttcttctccccctcctcctc 455 |||||||||||||||||||| Sbjct: 103640 ttcttctccccctcctcctc 103621
>emb|AL031650.22|HS1018D12 Human DNA sequence from clone RP5-1018D12 on chromosome 20q11.1-11.22 Contains part of a CDK5 regulatory subunit associated protein 3 (CDK5RAP3) pseudogene, the RPL31P3 gene for ribosomal protein L31 pseudogene 3, a novel pseudogene, the DEFB118 gene for defensin beta 118 and the 3' end of the the DEFB119 gene for defensin beta 119, complete sequence Length = 98490 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcct 454 |||||||||||||||||||| Sbjct: 44887 cttcttctccccctcctcct 44868
>gb|AC068909.31| Mus musculus BAC Clone 407f20 RPCI-23, complete sequence Length = 196383 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 ccttcttctccccctcctcc 453 |||||||||||||||||||| Sbjct: 185266 ccttcttctccccctcctcc 185285
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 aacaacatcgggtttgatggtaca 57 |||||||||||| ||||||||||| Sbjct: 2540373 aacaacatcgggattgatggtaca 2540396
>emb|AL513463.1|NC9G6 Neurospora crassa DNA linkage group V Cosmid contig 9G6 Length = 125561 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcctcatc 458 |||||||||| ||||||||||||| Sbjct: 62383 cttcttctcctcctcctcctcatc 62406
>emb|AL606482.14| Mouse DNA sequence from clone RP23-360H16 on chromosome 11 Contains the genes for olfactory receptors MOR135-7, -8, -10 and -28, three olfactory receptor MOR135 pseudogenes, and the gene for olfactory receptor MOR157-1, complete sequence Length = 199115 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcctcatc 458 |||||||||| ||||||||||||| Sbjct: 146310 cttcttctcctcctcctcctcatc 146333
>gb|AC094105.3| Homo sapiens chromosome 5 clone RP11-468D11, complete sequence Length = 186314 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 436 ttcttctccccctcctcctcatct 459 ||||||||| |||||||||||||| Sbjct: 35226 ttcttctcctcctcctcctcatct 35203
>gb|BC045562.1| Homo sapiens cDNA clone IMAGE:4815142 Length = 3092 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 cacccaaccttcctccacgt 223 |||||||||||||||||||| Sbjct: 1874 cacccaaccttcctccacgt 1855
>gb|BC040199.1| Homo sapiens cDNA clone IMAGE:4816860 Length = 3212 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 cacccaaccttcctccacgt 223 |||||||||||||||||||| Sbjct: 1991 cacccaaccttcctccacgt 1972
>gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox cluster, cholinesterase, and COLP5alpha genes, complete sequence Length = 796348 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccttcttctccccctcctcctcat 457 ||||||||||| |||||||||||| Sbjct: 429262 ccttcttctcctcctcctcctcat 429285
>gb|AC112673.7| Homo sapiens chromosome 8, clone RP11-212F11, complete sequence Length = 167547 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 tttcttgcaaactttgcagg 196 |||||||||||||||||||| Sbjct: 18565 tttcttgcaaactttgcagg 18546
>emb|AL592283.5| Mouse DNA sequence from clone RP23-386C23 on chromosome 4, complete sequence Length = 197763 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 575 tcatggccatggctttgcct 594 |||||||||||||||||||| Sbjct: 131225 tcatggccatggctttgcct 131244
>gb|AY081675.1| Arabidopsis thaliana putative protein (At3g56290) mRNA, complete cds Length = 655 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 199 ttgtccacccaaccttcctccacgtattcgccatcaacttcaac 242 ||||||||||| || |||||||| |||| ||||| |||||||| Sbjct: 389 ttgtccacccatccctcctccacatattgcccatccacttcaac 346
>gb|AC009093.10| Homo sapiens chromosome 16 clone RP11-426C22, complete sequence Length = 207997 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 gcttgggcaccttcttctcc 444 |||||||||||||||||||| Sbjct: 63544 gcttgggcaccttcttctcc 63525
>gb|AY062503.1| Arabidopsis thaliana putative protein (At3g56290; F18O21_250) mRNA, complete cds Length = 744 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 199 ttgtccacccaaccttcctccacgtattcgccatcaacttcaac 242 ||||||||||| || |||||||| |||| ||||| |||||||| Sbjct: 416 ttgtccacccatccctcctccacatattgcccatccacttcaac 373
>gb|AC157498.2| Pan troglodytes BAC clone CH251-412M6 from chromosome unknown, complete sequence Length = 159994 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatc 458 |||||||||||| ||||||||||| Sbjct: 154347 cttcttctccccttcctcctcatc 154324
>gb|AC154751.2| Mus musculus BAC clone RP24-399L21 from chromosome 14, complete sequence Length = 176992 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ccttcttctccccctcctcctcat 457 ||||||||||||| |||||||||| Sbjct: 14059 ccttcttctccccatcctcctcat 14082
>gb|AY958432.1| Homo sapiens methionine sulfoxide reductase gene, complete cds, alternatively spliced Length = 379048 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 tttcttgcaaactttgcagg 196 |||||||||||||||||||| Sbjct: 364908 tttcttgcaaactttgcagg 364927
>gb|AC092233.1|AC092233 Drosophila melanogaster, chromosome 2L, region 30F-31B, BAC clone BACR29P12, complete sequence Length = 161446 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 caccttcttctccccctcctcctc 455 |||||||| ||||||||||||||| Sbjct: 73729 caccttctcctccccctcctcctc 73752
>gb|AC010409.6|AC010409 Homo sapiens chromosome 5 clone CTD-2158P22, complete sequence Length = 117334 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 434 ccttcttctccccctcctcctcatctgctttc 465 |||||| ||||||||||||||| ||| ||||| Sbjct: 79995 ccttctcctccccctcctcctcctcttctttc 80026
>gb|AF212996.1|AF212996 Neurospora crassa heat shock protein 80 gene, complete cds Length = 3556 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatc 458 |||||||||| ||||||||||||| Sbjct: 1946 cttcttctcctcctcctcctcatc 1923
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcc 453 |||||||||||||||||||| Sbjct: 13660771 ccttcttctccccctcctcc 13660752
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ttcttctccccctcctcctc 455 |||||||||||||||||||| Sbjct: 16409707 ttcttctccccctcctcctc 16409726
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cctcctcctcatctgctttc 465 |||||||||||||||||||| Sbjct: 23838299 cctcctcctcatctgctttc 23838280
>dbj|AB197319.1| Uncultured bacterium C23O gene for catechol 2,3-dioxygenase, partial cds, clone: R2-375-103b Length = 375 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 gaagtccagcgcctcggtga 406 |||||||||||||||||||| Sbjct: 94 gaagtccagcgcctcggtga 75
>gb|AC104599.4| Homo sapiens BAC clone RP11-652K9 from 2, complete sequence Length = 80146 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ttcttctccccctcctcctc 455 |||||||||||||||||||| Sbjct: 46451 ttcttctccccctcctcctc 46470
>gb|AC079895.7| Homo sapiens BAC clone RP11-749M12 from 2, complete sequence Length = 149309 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ttcttctccccctcctcctc 455 |||||||||||||||||||| Sbjct: 35585 ttcttctccccctcctcctc 35604
>gb|AC113618.5| Homo sapiens BAC clone RP11-1367O10 from 2, complete sequence Length = 199917 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ttcttctccccctcctcctc 455 |||||||||||||||||||| Sbjct: 99361 ttcttctccccctcctcctc 99380
>gb|AC154838.2| Mus musculus BAC clone RP23-64F2 from chromosome 14, complete sequence Length = 224431 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 caccttcttctccccctcctcctc 455 |||||||| ||||||||||||||| Sbjct: 34858 caccttctcctccccctcctcctc 34881
>gb|AC154245.2| Mus musculus BAC clone RP24-326A24 from chromosome 14, complete sequence Length = 185892 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctcat 457 ||||||||||||| |||||||||| Sbjct: 37510 ccttcttctccccatcctcctcat 37487
>gb|AC155820.2| Mus musculus BAC clone RP23-360J10 from chromosome 10, complete sequence Length = 221801 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 cccctcctcctcatctgctt 463 |||||||||||||||||||| Sbjct: 123629 cccctcctcctcatctgctt 123648
>gb|AC133282.7| Mus musculus chromosome 15, clone RP24-408B1, complete sequence Length = 183129 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ttcttctccccctcctcctc 455 |||||||||||||||||||| Sbjct: 83824 ttcttctccccctcctcctc 83805
>ref|NM_001015527.1| Bos taurus general transcription factor IIF, polypeptide 1, 74kDa (GTF2F1), mRNA Length = 1788 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 428 tgggcaccttcttctccccctcctcctc 455 ||||| ||||||||||| |||||||||| Sbjct: 1193 tgggcgccttcttctcctcctcctcctc 1166
>gb|AC134312.3| Homo sapiens chromosome 16 clone RP11-863P13, complete sequence Length = 205610 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 gcttgggcaccttcttctcc 444 |||||||||||||||||||| Sbjct: 94600 gcttgggcaccttcttctcc 94581
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 gtccagcgcctcggtgatgt 409 |||||||||||||||||||| Sbjct: 6749816 gtccagcgcctcggtgatgt 6749797
>gb|AC127455.4| Homo sapiens chromosome 16 clone CTD-3057O21, complete sequence Length = 184641 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 gcttgggcaccttcttctcc 444 |||||||||||||||||||| Sbjct: 2088 gcttgggcaccttcttctcc 2107
>gb|AC092758.3| Papio anubis clone RP41-22J16, complete sequence Length = 171690 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcc 453 |||||||||||||||||||| Sbjct: 33159 ccttcttctccccctcctcc 33140
>gb|AC010629.8| Homo sapiens chromosome 5 clone CTD-2213L16, complete sequence Length = 82882 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatc 458 |||||||||| ||||||||||||| Sbjct: 60027 cttcttctcctcctcctcctcatc 60004
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 caccttcttctccccctcctcctc 455 ||||||||||||| |||||||||| Sbjct: 84059 caccttcttctcctcctcctcctc 84082
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030C08 Length = 163423 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cctcctcctcatctgctttc 465 |||||||||||||||||||| Sbjct: 59965 cctcctcctcatctgctttc 59946
>emb|BX323545.11| Mouse DNA sequence from clone RP23-358N13 on chromosome 4, complete sequence Length = 47574 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cctcctcctcatctgctttc 465 |||||||||||||||||||| Sbjct: 11164 cctcctcctcatctgctttc 11145
>dbj|AK120056.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O15, full insert sequence Length = 1895 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 caccttcttctccccctcctcctc 455 ||||||||||||| |||||||||| Sbjct: 55 caccttcttctcctcctcctcctc 78
>gb|AF223391.1|AF239258S3 Homo sapiens calcium channel alpha1E subunit (CACNA1E) gene, exons 7-49, and partial cds, alternatively spliced Length = 316704 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatc 458 |||||||||| ||||||||||||| Sbjct: 132589 cttcttctccacctcctcctcatc 132566
>gb|AC002479.1|AC002479 Human BAC clone GS1-9G13 from 5p15.2, complete sequence Length = 88682 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatc 458 |||||||||| ||||||||||||| Sbjct: 24430 cttcttctcctcctcctcctcatc 24407
>dbj|AK108051.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-H02, full insert sequence Length = 1184 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcc 453 |||||||||||||||||||| Sbjct: 445 ccttcttctccccctcctcc 426
>dbj|AK105168.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-F02, full insert sequence Length = 801 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 caccttcttctccccctcctcctc 455 ||||||||||||| |||||||||| Sbjct: 54 caccttcttctcctcctcctcctc 77
>gb|AC154040.7| Mus musculus 10 BAC RP23-348E15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210862 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ttcttctccccctcctcctc 455 |||||||||||||||||||| Sbjct: 151620 ttcttctccccctcctcctc 151601
>gb|AF151527.1|AF151527 Hyphantria cunea serpin gene, complete cds Length = 18665 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 atatatcttcctagattgtcaact 153 ||||||||| |||||||||||||| Sbjct: 7250 atatatcttgctagattgtcaact 7227
>gb|AE003627.4| Drosophila melanogaster chromosome 2L, section 36 of 83 of the complete sequence Length = 264225 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 432 caccttcttctccccctcctcctc 455 |||||||| ||||||||||||||| Sbjct: 174639 caccttctcctccccctcctcctc 174616
>gb|AC005666.1|AC005666 Homo sapiens chromosome 17, clone hRPK.112_H_10, complete sequence Length = 158905 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcc 453 |||||||||||||||||||| Sbjct: 76729 ccttcttctccccctcctcc 76710
>gb|AC005734.1|AC005734 Drosophila melanogaster DNA sequence (P1s DS00058 (D296), DS02068 (D297), and DS07249 (D318)), complete sequence Length = 155335 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 432 caccttcttctccccctcctcctc 455 |||||||| ||||||||||||||| Sbjct: 112932 caccttctcctccccctcctcctc 112909
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ttcttctccccctcctcctc 455 |||||||||||||||||||| Sbjct: 16500711 ttcttctccccctcctcctc 16500730
>emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079M09, complete sequence Length = 187359 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcc 453 |||||||||||||||||||| Sbjct: 55379 ccttcttctccccctcctcc 55360
>emb|AL844566.8| Mouse DNA sequence from clone RP23-173H17 on chromosome 2, complete sequence Length = 229583 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctcat 457 ||||||||||| |||||||||||| Sbjct: 77285 ccttcttctcctcctcctcctcat 77262
>gb|AC125520.3| Mus musculus BAC clone RP24-281J17 from 8, complete sequence Length = 178227 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 atctttgatggaatccctgg 343 |||||||||||||||||||| Sbjct: 119255 atctttgatggaatccctgg 119236
>gb|AC127255.4| Mus musculus BAC clone RP24-291I7 from 5, complete sequence Length = 153492 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 cttcttctccccctcctcct 454 |||||||||||||||||||| Sbjct: 44390 cttcttctccccctcctcct 44409
>gb|AC068908.21| Mus musculus BAC Clone 389o18 RPCI-23, complete sequence Length = 198576 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 ccttcttctccccctcctcc 453 |||||||||||||||||||| Sbjct: 117886 ccttcttctccccctcctcc 117905
>gb|AC136837.1| Homo sapiens chromosome 16 clone RP11-483N11, complete sequence Length = 65756 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 gcttgggcaccttcttctcc 444 |||||||||||||||||||| Sbjct: 6698 gcttgggcaccttcttctcc 6679
>dbj|AB209499.1| Homo sapiens mRNA for calcium channel, voltage-dependent, alpha 1E subunit variant protein Length = 11702 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatc 458 |||||||||| ||||||||||||| Sbjct: 2139 cttcttctccacctcctcctcatc 2116
>gb|AC167020.3| Mus musculus BAC clone RP23-201I6 from chromosome 1, complete sequence Length = 209249 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcctcat 457 ||||||||||| |||||||||||| Sbjct: 207833 ccttcttctcctcctcctcctcat 207810
>emb|AL732615.15| Mouse DNA sequence from clone RP23-190O8 on chromosome 4, complete sequence Length = 189819 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcct 454 |||||||||||||||||||| Sbjct: 108579 cttcttctccccctcctcct 108560
>emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chromosome 2, complete sequence Length = 148202 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 atcctcccttcatctttgat 332 |||||||||||||||||||| Sbjct: 28895 atcctcccttcatctttgat 28876
>emb|AL953913.5| Mouse DNA sequence from clone RP23-390H16 on chromosome 11, complete sequence Length = 60880 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 ccttcttctccccctcctcc 453 |||||||||||||||||||| Sbjct: 43124 ccttcttctccccctcctcc 43105
>gb|L27745.1|HUMVOCC Homo sapiens voltage-operated calcium channel, alpha-1 subunit mRNA, complete cds Length = 7110 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatc 458 |||||||||| ||||||||||||| Sbjct: 3339 cttcttctccacctcctcctcatc 3316
>emb|AL672100.7| Mouse DNA sequence from clone RP23-125A1 on chromosome 2, complete sequence Length = 196421 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 cttctccccctcctcctcat 457 |||||||||||||||||||| Sbjct: 5803 cttctccccctcctcctcat 5784
>emb|AL837521.6| Mouse DNA sequence from clone RP23-28I8 on chromosome 4, complete sequence Length = 230493 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 ctccccctcctcctcatctgcttt 464 ||||||||||||||| |||||||| Sbjct: 54843 ctccccctcctcctcctctgcttt 54820
>gb|L29385.1|HUMHVDCA Homo sapiens (clone pcDNA-alpha1E-3) voltage-dependent calcium channel alpha-1E-3 subunit mRNA, complete cds Length = 7089 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatc 458 |||||||||| ||||||||||||| Sbjct: 3507 cttcttctccacctcctcctcatc 3484
>gb|L29384.1|HUMHVDC Homo sapiens (clone pcDNA-alpha1E-1) voltage-dependent calcium channel alpha-1E-1 subunit mRNA, complete cds Length = 7032 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 cttcttctccccctcctcctcatc 458 |||||||||| ||||||||||||| Sbjct: 3450 cttcttctccacctcctcctcatc 3427 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,504,518 Number of Sequences: 3902068 Number of extensions: 5504518 Number of successful extensions: 129516 Number of sequences better than 10.0: 201 Number of HSP's better than 10.0 without gapping: 201 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 128526 Number of HSP's gapped (non-prelim): 989 length of query: 601 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 578 effective length of database: 17,143,297,704 effective search space: 9908826072912 effective search space used: 9908826072912 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
