ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal13m07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_480189.1| Oryza sativa (japonica cultivar-group), mRNA 307 3e-80
2dbj|AK104073.1| Oryza sativa (japonica cultivar-group) cDNA clon... 307 3e-80
3gb|AY452478.1| Oryza sativa (japonica cultivar-group) circadian ... 299 6e-78
4dbj|AK111893.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 2e-75
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 220 5e-54
6dbj|AK121547.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 5e-54
7dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic D... 220 5e-54
8dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
9dbj|AB210845.1| Lemna paucicostata LpLHY H1 mRNA for LHY homolog... 54 6e-04
10ref|NM_179237.1| Arabidopsis thaliana LHY (LATE ELONGATED HYPOCO... 48 0.038
11ref|NM_099988.3| Arabidopsis thaliana LHY (LATE ELONGATED HYPOCO... 48 0.038
12ref|NM_001035847.1| Arabidopsis thaliana LHY (LATE ELONGATED HYP... 48 0.038
13gb|AY519507.1| Arabidopsis thaliana MYB transcription factor (At... 48 0.038
14emb|BX817115.1|CNS0AELF Arabidopsis thaliana Full-length cDNA Co... 48 0.038
15emb|AJ006404.1|ATAJ6404 Arabidopsis thaliana mRNA for LATE ELONG... 48 0.038
16gb|BC108602.1| Xenopus laevis cDNA clone MGC:131139 IMAGE:720668... 42 2.3
17gb|BC032563.1| Homo sapiens cytoplasmic linker associated protei... 42 2.3
18gb|BC112940.1| Homo sapiens cytoplasmic linker associated protei... 42 2.3
19emb|AL451065.13| Human DNA sequence from clone RP11-274J16 on ch... 42 2.3
20gb|AF347693.1| Homo sapiens multiple asters 1 (MAST1) mRNA, comp... 42 2.3
21emb|CR933722.1| Homo sapiens mRNA; cDNA DKFZp686H2039 (from clon... 42 2.3
22emb|CR749627.1| Homo sapiens mRNA; cDNA DKFZp686D1968 (from clon... 42 2.3
23emb|AJ459419.1|TRU459419 Takifugu rubripes cacng5 gene, prkca ge... 42 2.3
24emb|BX901901.6| Zebrafish DNA sequence from clone CH211-223B8 in... 42 2.3
25ref|NM_015282.1| Homo sapiens cytoplasmic linker associated prot... 42 2.3
26dbj|AK123216.1| Homo sapiens cDNA FLJ41222 fis, clone BRAMY2029204 42 2.3
27emb|BX648933.1|HSM809084 Homo sapiens mRNA; cDNA DKFZp686A1844 (... 42 2.3
28dbj|AK074338.1| Homo sapiens cDNA FLJ23758 fis, clone HEP18066 42 2.3
29gb|AC140940.1| Gallus gallus BAC clone TAM32-30H10 from chromoso... 42 2.3
30gb|AC109180.20| Mus musculus chromosome 10, clone RP23-13J14, co... 42 2.3
31dbj|AB014522.1| Homo sapiens mRNA for KIAA0622 protein, partial cds 42 2.3
32gb|AF499719.1| Thellungiella halophila putative selenium-binding... 40 9.2
33gb|AC006044.2| Homo sapiens BAC clone RP11-539B24 from 7, comple... 40 9.2
34emb|AL449165.1| Human DNA sequence from clone RP11-533E16 on chr... 40 9.2
35emb|AL121916.14|HSJ189G13 Human DNA sequence from clone RP1-189G... 40 9.2
36gb|AC164638.4| Mus musculus BAC clone RP23-198N12 from chromosom... 40 9.2
37emb|AL132969.2|ATF8J2 Arabidopsis thaliana DNA chromosome 3, BAC... 40 9.2
38gb|AC119750.2| Homo sapiens chromosome 1 clone RP11-459K23, comp... 40 9.2
39gb|AC099793.2| Homo sapiens chromosome 1 clone RP11-565N2, compl... 40 9.2
40gb|AC157819.5| Mus musculus chromosome 3, clone RP24-273H20, com... 40 9.2
41emb|Y12736.2|LLCPJW565 Lactococcus lactis subsp. cremoris plasmi... 40 9.2
42gb|AC103937.16| Mus musculus chromosome 3, clone RP23-229C5, com... 40 9.2
43emb|BX001020.6| Mouse DNA sequence from clone RP23-167B1 on chro... 40 9.2

>ref|XM_480189.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2178

 Score =  307 bits (155), Expect = 3e-80
 Identities = 378/453 (83%)
 Strand = Plus / Minus

                                                                        
Query: 213  ttcgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctc 272
            |||||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||
Sbjct: 2166 ttcgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctc 2107

                                                                        
Query: 273  ctttgcttccaccgagcacctcttgtaaggtttgaagcctgtccggcgggatttcatatt 332
            ||| |||||||| |||||||||||||| |||||||| || |||| ||| |||||||  ||
Sbjct: 2106 cttcgcttccactgagcacctcttgtatggtttgaaaccggtcctgcgagatttcagctt 2047

                                                                        
Query: 333  caggtgtgacaattcaatgggaaaggaagctcttggcccaaccaatgtgtcaagttcatg 392
            ||||| |||||||||| | |||||||||||||||||| || ||  |||||| ||||| ||
Sbjct: 2046 caggtttgacaattcattaggaaaggaagctcttggctcatccgctgtgtcgagttcttg 1987

                                                                        
Query: 393  gtccataactgcagcactcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctc 452
             || ||||  || ||| ||||||||||||| ||||||||||| ||  |||||||||  ||
Sbjct: 1986 atcaataatagcggcattcttgttgaggtcaaccgtcaccgtggttacttcatcttcttc 1927

                                                                        
Query: 453  ccctctgggaaccaccttcaatccttctgcttgtggaggagaaaagctntggggaagctt 512
            | |  ||  || | ||||  |||||||| |||| |||||||||||||| ||||||||| |
Sbjct: 1926 ctccttgctaatctcctttgatccttctacttgcggaggagaaaagctttggggaagcct 1867

                                                                        
Query: 513  tcctctactgaacagtttatcgaaagccatacgaccctcctcggaaacttccttccatga 572
            | ||||||||||||||  ||| ||||||| ||||||||| || |||||||||||||||||
Sbjct: 1866 ttctctactgaacagtgcatcaaaagccagacgaccctcttcagaaacttccttccatga 1807

                                                                        
Query: 573  atcattcgtgcttgaaatgttcctaaacctgcgatggntcatgtcaccagctgaagaatt 632
            |||| | ||||||| | || ||||||| || || ||| |  ||||||| |||||||| ||
Sbjct: 1806 atcacttgtgcttgcactgctcctaaatctacggtggttattgtcaccggctgaagagtt 1747

                                             
Query: 633  actgcaacatgcttgctgtgtcttgtcgttagc 665
            ||||||| ||||||||| || ||||||||||||
Sbjct: 1746 actgcaagatgcttgctttgccttgtcgttagc 1714



to top

>dbj|AK104073.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-C12, full
           insert sequence
          Length = 1275

 Score =  307 bits (155), Expect = 3e-80
 Identities = 378/453 (83%)
 Strand = Plus / Minus

                                                                       
Query: 213 ttcgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctc 272
           |||||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||
Sbjct: 995 ttcgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctc 936

                                                                       
Query: 273 ctttgcttccaccgagcacctcttgtaaggtttgaagcctgtccggcgggatttcatatt 332
           ||| |||||||| |||||||||||||| |||||||| || |||| ||| |||||||  ||
Sbjct: 935 cttcgcttccactgagcacctcttgtatggtttgaaaccggtcctgcgagatttcagctt 876

                                                                       
Query: 333 caggtgtgacaattcaatgggaaaggaagctcttggcccaaccaatgtgtcaagttcatg 392
           ||||| |||||||||| | |||||||||||||||||| || ||  |||||| ||||| ||
Sbjct: 875 caggtttgacaattcattaggaaaggaagctcttggctcatccgctgtgtcgagttcttg 816

                                                                       
Query: 393 gtccataactgcagcactcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctc 452
            || ||||  || ||| ||||||||||||| ||||||||||| ||  |||||||||  ||
Sbjct: 815 atcaataatagcggcattcttgttgaggtcaaccgtcaccgtggttacttcatcttcttc 756

                                                                       
Query: 453 ccctctgggaaccaccttcaatccttctgcttgtggaggagaaaagctntggggaagctt 512
           | |  ||  || | ||||  |||||||| |||| |||||||||||||| ||||||||| |
Sbjct: 755 ctccttgctaatctcctttgatccttctacttgcggaggagaaaagctttggggaagcct 696

                                                                       
Query: 513 tcctctactgaacagtttatcgaaagccatacgaccctcctcggaaacttccttccatga 572
           | ||||||||||||||  ||| ||||||| ||||||||| || |||||||||||||||||
Sbjct: 695 ttctctactgaacagtgcatcaaaagccagacgaccctcttcagaaacttccttccatga 636

                                                                       
Query: 573 atcattcgtgcttgaaatgttcctaaacctgcgatggntcatgtcaccagctgaagaatt 632
           |||| | ||||||| | || ||||||| || || ||| |  ||||||| |||||||| ||
Sbjct: 635 atcacttgtgcttgcactgctcctaaatctacggtggttattgtcaccggctgaagagtt 576

                                            
Query: 633 actgcaacatgcttgctgtgtcttgtcgttagc 665
           ||||||| ||||||||| || ||||||||||||
Sbjct: 575 actgcaagatgcttgctttgccttgtcgttagc 543



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 84/100 (84%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                        
Query: 40   gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 99
            |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 1149 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 1091

                                                    
Query: 100  tgcaaggactggcaagtcctatagtagcttagatgtaaat 139
            || |||| |||  ||||||||| ||||||  |||||||||
Sbjct: 1090 tggaaggtctg--aagtcctatggtagctcggatgtaaat 1053



to top

>gb|AY452478.1| Oryza sativa (japonica cultivar-group) circadian oscillator component
            (COC1) mRNA, complete cds
          Length = 2608

 Score =  299 bits (151), Expect = 6e-78
 Identities = 377/453 (83%)
 Strand = Plus / Minus

                                                                        
Query: 213  ttcgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctc 272
            |||||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||
Sbjct: 2412 ttcgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctc 2353

                                                                        
Query: 273  ctttgcttccaccgagcacctcttgtaaggtttgaagcctgtccggcgggatttcatatt 332
            ||| |||||||| |||||||||||||| |||||||| || |||| ||| |||||||  ||
Sbjct: 2352 cttcgcttccactgagcacctcttgtatggtttgaaaccggtcctgcgagatttcagctt 2293

                                                                        
Query: 333  caggtgtgacaattcaatgggaaaggaagctcttggcccaaccaatgtgtcaagttcatg 392
            ||||| |||||||||| | |||||||||||||||||| || ||  |||||| ||||| ||
Sbjct: 2292 caggtttgacaattcattaggaaaggaagctcttggctcatccgctgtgtcgagttcttg 2233

                                                                        
Query: 393  gtccataactgcagcactcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctc 452
             || ||||  || ||| ||||||||||||| ||||||||||| ||  |||||||||  ||
Sbjct: 2232 atcaataatagcggcattcttgttgaggtcaaccgtcaccgtggttacttcatcttcttc 2173

                                                                        
Query: 453  ccctctgggaaccaccttcaatccttctgcttgtggaggagaaaagctntggggaagctt 512
            | |  ||  || | ||||  |||||||| |||| |||||||||||||| ||||||||| |
Sbjct: 2172 ctccttgctaatctcctttgatccttctacttgcggaggagaaaagctttggggaagcct 2113

                                                                        
Query: 513  tcctctactgaacagtttatcgaaagccatacgaccctcctcggaaacttccttccatga 572
            | ||||||||||||||  ||| ||||||| ||||||||  || |||||||||||||||||
Sbjct: 2112 ttctctactgaacagtgcatcaaaagccagacgaccctattcagaaacttccttccatga 2053

                                                                        
Query: 573  atcattcgtgcttgaaatgttcctaaacctgcgatggntcatgtcaccagctgaagaatt 632
            |||| | ||||||| | || ||||||| || || ||| |  ||||||| |||||||| ||
Sbjct: 2052 atcacttgtgcttgcactgctcctaaatctacggtggttattgtcaccggctgaagagtt 1993

                                             
Query: 633  actgcaacatgcttgctgtgtcttgtcgttagc 665
            ||||||| ||||||||| || ||||||||||||
Sbjct: 1992 actgcaagatgcttgctttgccttgtcgttagc 1960



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 85/100 (85%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                        
Query: 40   gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 99
            |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 2566 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 2508

                                                    
Query: 100  tgcaaggactggcaagtcctatagtagcttagatgtaaat 139
            || |||| |||  ||||||||| |||||| ||||||||||
Sbjct: 2507 tggaaggtctg--aagtcctatggtagctcagatgtaaat 2470



to top

>dbj|AK111893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071N16, full
            insert sequence
          Length = 3237

 Score =  291 bits (147), Expect = 2e-75
 Identities = 376/453 (83%)
 Strand = Plus / Minus

                                                                        
Query: 213  ttcgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctc 272
            |||||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||
Sbjct: 2957 ttcgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctc 2898

                                                                        
Query: 273  ctttgcttccaccgagcacctcttgtaaggtttgaagcctgtccggcgggatttcatatt 332
            ||| |||||||| |||||||||||||| |||||||| || |||| ||| |||||||  ||
Sbjct: 2897 cttcgcttccactgagcacctcttgtatggtttgaaaccggtcctgcgagatttcagctt 2838

                                                                        
Query: 333  caggtgtgacaattcaatgggaaaggaagctcttggcccaaccaatgtgtcaagttcatg 392
            ||||| |||||||||| | |||||||||||||||||| || ||  |||||| ||||| ||
Sbjct: 2837 caggtttgacaattcattaggaaaggaagctcttggctcatccgctgtgtcgagttcttg 2778

                                                                        
Query: 393  gtccataactgcagcactcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctc 452
             || ||||  || ||| ||||||||||||| ||||||||||| ||  |||||||||  ||
Sbjct: 2777 atcaataatagcggcattcttgttgaggtcaaccgtcaccgtggttacttcatcttcttc 2718

                                                                        
Query: 453  ccctctgggaaccaccttcaatccttctgcttgtggaggagaaaagctntggggaagctt 512
            | |  ||   | | ||||  |||||||| |||| |||||||||||||| ||||||||| |
Sbjct: 2717 ctccttgctgatctcctttgatccttctacttgcggaggagaaaagctttggggaagcct 2658

                                                                        
Query: 513  tcctctactgaacagtttatcgaaagccatacgaccctcctcggaaacttccttccatga 572
            | ||||||||||||||  ||| ||||||| ||||||| | || |||||||||||||||||
Sbjct: 2657 ttctctactgaacagtgcatcaaaagccagacgacccccttcagaaacttccttccatga 2598

                                                                        
Query: 573  atcattcgtgcttgaaatgttcctaaacctgcgatggntcatgtcaccagctgaagaatt 632
            |||| | ||||||| | || ||||||| || || ||| |  ||||||| |||||||| ||
Sbjct: 2597 atcacttgtgcttgcactgctcctaaatctacggtggttattgtcaccggctgaagagtt 2538

                                             
Query: 633  actgcaacatgcttgctgtgtcttgtcgttagc 665
            ||||||| ||||||||| || ||||||||||||
Sbjct: 2537 actgcaagatgcttgctttgccttgtcgttagc 2505



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 84/100 (84%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                        
Query: 40   gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 99
            |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 3111 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 3053

                                                    
Query: 100  tgcaaggactggcaagtcctatagtagcttagatgtaaat 139
            || |||| |||  ||||||||| ||||||  |||||||||
Sbjct: 3052 tggaaggtctg--aagtcctatggtagctcggatgtaaat 3015



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  220 bits (111), Expect = 5e-54
 Identities = 281/338 (83%)
 Strand = Plus / Minus

                                                                           
Query: 213     ttcgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctc 272
               |||||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||
Sbjct: 3366760 ttcgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctc 3366701

                                                                           
Query: 273     ctttgcttccaccgagcacctcttgtaaggtttgaagcctgtccggcgggatttcatatt 332
               ||| |||||||| |||||||||||||| |||||||| || |||| ||| |||||||  ||
Sbjct: 3366700 cttcgcttccactgagcacctcttgtatggtttgaaaccggtcctgcgagatttcagctt 3366641

                                                                           
Query: 333     caggtgtgacaattcaatgggaaaggaagctcttggcccaaccaatgtgtcaagttcatg 392
               ||||| |||||||||| | |||||||||||||||||| || ||  |||||| ||||| ||
Sbjct: 3366640 caggtttgacaattcattaggaaaggaagctcttggctcatccgctgtgtcgagttcttg 3366581

                                                                           
Query: 393     gtccataactgcagcactcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctc 452
                || ||||  || ||| ||||||||||||| ||||||||||| ||  |||||||||  ||
Sbjct: 3366580 atcaataatagcggcattcttgttgaggtcaaccgtcaccgtggttacttcatcttcttc 3366521

                                                                           
Query: 453     ccctctgggaaccaccttcaatccttctgcttgtggaggagaaaagctntggggaagctt 512
               | |  ||  || | ||||  |||||||| |||| |||||||||||||| ||||||||| |
Sbjct: 3366520 ctccttgctaatctcctttgatccttctacttgcggaggagaaaagctttggggaagcct 3366461

                                                     
Query: 513     tcctctactgaacagtttatcgaaagccatacgaccct 550
               | ||||||||||||||  ||| ||||||| ||||||||
Sbjct: 3366460 ttctctactgaacagtgcatcaaaagccagacgaccct 3366423



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                           
Query: 556     gaaacttccttccatgaatcattcgtgcttgaaatgttcctaaacctgcgatggntcatg 615
               ||||||||||||||||||||| | ||||||| | || ||||||| || || ||| |  ||
Sbjct: 3366327 gaaacttccttccatgaatcacttgtgcttgcactgctcctaaatctacggtggttattg 3366268

                                                                 
Query: 616     tcaccagctgaagaattactgcaacatgcttgctgtgtcttgtcgttagc 665
               ||||| |||||||| ||||||||| ||||||||| || ||||||||||||
Sbjct: 3366267 tcaccggctgaagagttactgcaagatgcttgctttgccttgtcgttagc 3366218



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 84/100 (84%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                           
Query: 40      gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 99
               |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 3366914 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 3366856

                                                       
Query: 100     tgcaaggactggcaagtcctatagtagcttagatgtaaat 139
               || |||| |||  ||||||||| ||||||  |||||||||
Sbjct: 3366855 tggaaggtctg--aagtcctatggtagctcggatgtaaat 3366818



to top

>dbj|AK121547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032F11, full
           insert sequence
          Length = 650

 Score =  220 bits (111), Expect = 5e-54
 Identities = 281/338 (83%)
 Strand = Plus / Minus

                                                                       
Query: 213 ttcgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctc 272
           |||||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||
Sbjct: 359 ttcgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctc 300

                                                                       
Query: 273 ctttgcttccaccgagcacctcttgtaaggtttgaagcctgtccggcgggatttcatatt 332
           ||| |||||||| |||||||||||||| |||||||| || |||| ||| |||||||  ||
Sbjct: 299 cttcgcttccactgagcacctcttgtatggtttgaaaccggtcctgcgagatttcagctt 240

                                                                       
Query: 333 caggtgtgacaattcaatgggaaaggaagctcttggcccaaccaatgtgtcaagttcatg 392
           ||||| |||||||||| | |||||||||||||||||| || ||  |||||| ||||| ||
Sbjct: 239 caggtttgacaattcattaggaaaggaagctcttggctcatccgctgtgtcgagttcttg 180

                                                                       
Query: 393 gtccataactgcagcactcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctc 452
            || ||||  || ||| ||||||||||||| ||||||||||| ||  |||||||||  ||
Sbjct: 179 atcaataatagcggcattcttgttgaggtcaaccgtcaccgtggttacttcatcttcttc 120

                                                                       
Query: 453 ccctctgggaaccaccttcaatccttctgcttgtggaggagaaaagctntggggaagctt 512
           | |  ||  || | ||||  |||||||| |||| |||||||||||||| ||||||||| |
Sbjct: 119 ctccttgctaatctcctttgatccttctacttgcggaggagaaaagctttggggaagcct 60

                                                 
Query: 513 tcctctactgaacagtttatcgaaagccatacgaccct 550
           | ||||||||||||||  ||| ||||||| ||||||||
Sbjct: 59  ttctctactgaacagtgcatcaaaagccagacgaccct 22



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 84/100 (84%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                       
Query: 40  gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 99
           |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 513 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 455

                                                   
Query: 100 tgcaaggactggcaagtcctatagtagcttagatgtaaat 139
           || |||| |||  ||||||||| ||||||  |||||||||
Sbjct: 454 tggaaggtctg--aagtcctatggtagctcggatgtaaat 417



to top

>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0438H08
          Length = 148626

 Score =  220 bits (111), Expect = 5e-54
 Identities = 281/338 (83%)
 Strand = Plus / Minus

                                                                          
Query: 213    ttcgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctc 272
              |||||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||
Sbjct: 144327 ttcgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctc 144268

                                                                          
Query: 273    ctttgcttccaccgagcacctcttgtaaggtttgaagcctgtccggcgggatttcatatt 332
              ||| |||||||| |||||||||||||| |||||||| || |||| ||| |||||||  ||
Sbjct: 144267 cttcgcttccactgagcacctcttgtatggtttgaaaccggtcctgcgagatttcagctt 144208

                                                                          
Query: 333    caggtgtgacaattcaatgggaaaggaagctcttggcccaaccaatgtgtcaagttcatg 392
              ||||| |||||||||| | |||||||||||||||||| || ||  |||||| ||||| ||
Sbjct: 144207 caggtttgacaattcattaggaaaggaagctcttggctcatccgctgtgtcgagttcttg 144148

                                                                          
Query: 393    gtccataactgcagcactcttgttgaggtcgaccgtcaccgtagtagcttcatcttgctc 452
               || ||||  || ||| ||||||||||||| ||||||||||| ||  |||||||||  ||
Sbjct: 144147 atcaataatagcggcattcttgttgaggtcaaccgtcaccgtggttacttcatcttcttc 144088

                                                                          
Query: 453    ccctctgggaaccaccttcaatccttctgcttgtggaggagaaaagctntggggaagctt 512
              | |  ||  || | ||||  |||||||| |||| |||||||||||||| ||||||||| |
Sbjct: 144087 ctccttgctaatctcctttgatccttctacttgcggaggagaaaagctttggggaagcct 144028

                                                    
Query: 513    tcctctactgaacagtttatcgaaagccatacgaccct 550
              | ||||||||||||||  ||| ||||||| ||||||||
Sbjct: 144027 ttctctactgaacagtgcatcaaaagccagacgaccct 143990



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                          
Query: 556    gaaacttccttccatgaatcattcgtgcttgaaatgttcctaaacctgcgatggntcatg 615
              ||||||||||||||||||||| | ||||||| | || ||||||| || || ||| |  ||
Sbjct: 143894 gaaacttccttccatgaatcacttgtgcttgcactgctcctaaatctacggtggttattg 143835

                                                                
Query: 616    tcaccagctgaagaattactgcaacatgcttgctgtgtcttgtcgttagc 665
              ||||| |||||||| ||||||||| ||||||||| || ||||||||||||
Sbjct: 143834 tcaccggctgaagagttactgcaagatgcttgctttgccttgtcgttagc 143785



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 84/100 (84%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                          
Query: 40     gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 99
              |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 144481 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 144423

                                                      
Query: 100    tgcaaggactggcaagtcctatagtagcttagatgtaaat 139
              || |||| |||  ||||||||| ||||||  |||||||||
Sbjct: 144422 tggaaggtctg--aagtcctatggtagctcggatgtaaat 144385



to top

>dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
           PAC clone:P0498E12
          Length = 153523

 Score =  145 bits (73), Expect = 2e-31
 Identities = 136/157 (86%)
 Strand = Plus / Minus

                                                                       
Query: 213 ttcgctgtcaaggcgaatccttttggtaccaacctcgtcagcagccggcaccctattctc 272
           |||||| ||||| |||||||| |||||||||||||| ||   |||||| ||||| |||||
Sbjct: 179 ttcgctctcaagacgaatcctcttggtaccaacctcatcgctagccggtaccctgttctc 120

                                                                       
Query: 273 ctttgcttccaccgagcacctcttgtaaggtttgaagcctgtccggcgggatttcatatt 332
           ||| |||||||| |||||||||||||| |||||||| || |||| ||| |||||||  ||
Sbjct: 119 cttcgcttccactgagcacctcttgtatggtttgaaaccggtcctgcgagatttcagctt 60

                                                
Query: 333 caggtgtgacaattcaatgggaaaggaagctcttggc 369
           ||||| |||||||||| | ||||||||||||||||||
Sbjct: 59  caggtttgacaattcattaggaaaggaagctcttggc 23



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 84/100 (84%), Gaps = 3/100 (3%)
 Strand = Plus / Minus

                                                                       
Query: 40  gctgctcggcaagcattaacatacaacacataacaaattgagttctgtgaaacactgcat 99
           |||||| |||||||||||| |||||||||| || |||||||||| |||||   | |||||
Sbjct: 333 gctgcttggcaagcattaagatacaacacacaataaattgagtt-tgtgaggtaatgcat 275

                                                   
Query: 100 tgcaaggactggcaagtcctatagtagcttagatgtaaat 139
           || |||| |||  ||||||||| ||||||  |||||||||
Sbjct: 274 tggaaggtctg--aagtcctatggtagctcggatgtaaat 237



to top

>dbj|AB210845.1| Lemna paucicostata LpLHY H1 mRNA for LHY homologue1, complete cds
          Length = 2338

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 280  tccaccgagcacctcttgtaaggtttgaagcctgt 314
            ||||||||||||||||||||||| ||||| |||||
Sbjct: 2116 tccaccgagcacctcttgtaaggcttgaatcctgt 2082



to top

>ref|NM_179237.1| Arabidopsis thaliana LHY (LATE ELONGATED HYPOCOTYL); DNA binding /
            transcription factor AT1G01060 (LHY) transcript variant
            AT1G01060.2 mRNA, complete cds
          Length = 2814

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 541  atacgaccctcctcggaaacttccttccatgaatca 576
            ||||||||||| ||||| ||||||||||| ||||||
Sbjct: 2160 atacgaccctcttcggagacttccttccacgaatca 2125



to top

>ref|NM_099988.3| Arabidopsis thaliana LHY (LATE ELONGATED HYPOCOTYL); DNA binding /
            transcription factor AT1G01060 (LHY) transcript variant
            AT1G01060.1 mRNA, complete cds
          Length = 2704

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 541  atacgaccctcctcggaaacttccttccatgaatca 576
            ||||||||||| ||||| ||||||||||| ||||||
Sbjct: 2050 atacgaccctcttcggagacttccttccacgaatca 2015



to top

>ref|NM_001035847.1| Arabidopsis thaliana LHY (LATE ELONGATED HYPOCOTYL); DNA binding
            AT1G01060 (LHY) transcript variant AT1G01060.3 mRNA,
            complete cds
          Length = 2517

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 541  atacgaccctcctcggaaacttccttccatgaatca 576
            ||||||||||| ||||| ||||||||||| ||||||
Sbjct: 1967 atacgaccctcttcggagacttccttccacgaatca 1932



to top

>gb|AY519507.1| Arabidopsis thaliana MYB transcription factor (At1g01060) mRNA,
            complete cds
          Length = 1938

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 541  atacgaccctcctcggaaacttccttccatgaatca 576
            ||||||||||| ||||| ||||||||||| ||||||
Sbjct: 1610 atacgaccctcttcggagacttccttccacgaatca 1575



to top

>emb|BX817115.1|CNS0AELF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH86ZB04 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2427

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 541  atacgaccctcctcggaaacttccttccatgaatca 576
            ||||||||||| ||||| ||||||||||| ||||||
Sbjct: 2037 atacgaccctcttcggagacttccttccacgaatca 2002



to top

>emb|AJ006404.1|ATAJ6404 Arabidopsis thaliana mRNA for LATE ELONGATED HYPOCOTYL MYB
            transcription factor
          Length = 2526

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 541  atacgaccctcctcggaaacttccttccatgaatca 576
            ||||||||||| ||||| ||||||||||| ||||||
Sbjct: 1947 atacgaccctcttcggagacttccttccacgaatca 1912



to top

>gb|BC108602.1| Xenopus laevis cDNA clone MGC:131139 IMAGE:7206683, complete cds
          Length = 2690

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 474  tccttctgcttgtggaggaga 494
            |||||||||||||||||||||
Sbjct: 1937 tccttctgcttgtggaggaga 1957



to top

>gb|BC032563.1| Homo sapiens cytoplasmic linker associated protein 1, mRNA (cDNA
           clone IMAGE:5579440), complete cds
          Length = 3746

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 434 tagtagcttcatcttgctccc 454
           |||||||||||||||||||||
Sbjct: 561 tagtagcttcatcttgctccc 541



to top

>gb|BC112940.1| Homo sapiens cytoplasmic linker associated protein 1, mRNA (cDNA
            clone MGC:131895 IMAGE:5501463), complete cds
          Length = 4974

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 434  tagtagcttcatcttgctccc 454
            |||||||||||||||||||||
Sbjct: 4675 tagtagcttcatcttgctccc 4655



to top

>emb|AL451065.13| Human DNA sequence from clone RP11-274J16 on chromosome 9 Contains the
             3' end of the FGD3 gene for FGD1 family, member 3
             (FLJ00004), a novel gene, a novel gene (MGC26847), a novel
             gene (MGC11115), the NINJ1 gene for ninjurin 1 and three
             CpG islands, complete sequence
          Length = 163689

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 340   gacaattcaatgggaaaggaa 360
             |||||||||||||||||||||
Sbjct: 87403 gacaattcaatgggaaaggaa 87383



to top

>gb|AF347693.1| Homo sapiens multiple asters 1 (MAST1) mRNA, complete cds
          Length = 7888

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 434  tagtagcttcatcttgctccc 454
            |||||||||||||||||||||
Sbjct: 4707 tagtagcttcatcttgctccc 4687



to top

>emb|CR933722.1| Homo sapiens mRNA; cDNA DKFZp686H2039 (from clone DKFZp686H2039)
          Length = 4021

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 434  tagtagcttcatcttgctccc 454
            |||||||||||||||||||||
Sbjct: 3752 tagtagcttcatcttgctccc 3732



to top

>emb|CR749627.1| Homo sapiens mRNA; cDNA DKFZp686D1968 (from clone DKFZp686D1968)
          Length = 4787

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 434  tagtagcttcatcttgctccc 454
            |||||||||||||||||||||
Sbjct: 1612 tagtagcttcatcttgctccc 1592



to top

>emb|AJ459419.1|TRU459419 Takifugu rubripes cacng5 gene, prkca gene and putative LINE-like
             retrotransposon, cosmids C012B17 and C123B01
          Length = 64219

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 112   caagtcctatagtagcttagatgta 136
             ||||||||| |||||||||||||||
Sbjct: 15454 caagtcctacagtagcttagatgta 15478



to top

>emb|BX901901.6| Zebrafish DNA sequence from clone CH211-223B8 in linkage group 1,
              complete sequence
          Length = 172983

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 54     attaacatacaacacataacaaatt 78
              ||||||||| |||||||||||||||
Sbjct: 162761 attaacatataacacataacaaatt 162785



to top

>ref|NM_015282.1| Homo sapiens cytoplasmic linker associated protein 1 (CLASP1), mRNA
          Length = 8089

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 434  tagtagcttcatcttgctccc 454
            |||||||||||||||||||||
Sbjct: 4932 tagtagcttcatcttgctccc 4912



to top

>dbj|AK123216.1| Homo sapiens cDNA FLJ41222 fis, clone BRAMY2029204
          Length = 2326

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 434  tagtagcttcatcttgctccc 454
            |||||||||||||||||||||
Sbjct: 2042 tagtagcttcatcttgctccc 2022



to top

>emb|BX648933.1|HSM809084 Homo sapiens mRNA; cDNA DKFZp686A1844 (from clone DKFZp686A1844)
          Length = 5770

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 434  tagtagcttcatcttgctccc 454
            |||||||||||||||||||||
Sbjct: 2581 tagtagcttcatcttgctccc 2561



to top

>dbj|AK074338.1| Homo sapiens cDNA FLJ23758 fis, clone HEP18066
          Length = 5906

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 434  tagtagcttcatcttgctccc 454
            |||||||||||||||||||||
Sbjct: 2990 tagtagcttcatcttgctccc 2970



to top

>gb|AC140940.1| Gallus gallus BAC clone TAM32-30H10 from chromosome ul, complete
             sequence
          Length = 105327

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 477   ttctgcttgtggaggagaaaa 497
             |||||||||||||||||||||
Sbjct: 41811 ttctgcttgtggaggagaaaa 41831



to top

>gb|AC109180.20| Mus musculus chromosome 10, clone RP23-13J14, complete sequence
          Length = 212628

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 346    tcaatgggaaaggaagctctt 366
              |||||||||||||||||||||
Sbjct: 175269 tcaatgggaaaggaagctctt 175289



to top

>dbj|AB014522.1| Homo sapiens mRNA for KIAA0622 protein, partial cds
          Length = 6951

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 434  tagtagcttcatcttgctccc 454
            |||||||||||||||||||||
Sbjct: 3795 tagtagcttcatcttgctccc 3775



to top

>gb|AF499719.1| Thellungiella halophila putative selenium-binding protein mRNA,
           complete cds
          Length = 1509

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 233 ttttggtaccaacctcgtca 252
           ||||||||||||||||||||
Sbjct: 509 ttttggtaccaacctcgtca 528



to top

>gb|AC006044.2| Homo sapiens BAC clone RP11-539B24 from 7, complete sequence
          Length = 141509

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 617   caccagctgaagaattactgcaacatgc 644
             |||||||||||||| ||| |||||||||
Sbjct: 49609 caccagctgaagaagtacagcaacatgc 49582



to top

>emb|AL449165.1| Human DNA sequence from clone RP11-533E16 on chromosome 6, complete
            sequence
          Length = 57313

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 558  aacttccttccatgaatcat 577
            ||||||||||||||||||||
Sbjct: 5018 aacttccttccatgaatcat 4999



to top

>emb|AL121916.14|HSJ189G13 Human DNA sequence from clone RP1-189G13 on chromosome 20 Contains the
             RPL7AL2 gene for ribosomal protein L7a like 2 (pseudogene)
             and part of a ribosomal protein S4 pseudogene, complete
             sequence
          Length = 100167

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    ttgcaaggactggcaagtcc 118
             ||||||||||||||||||||
Sbjct: 24880 ttgcaaggactggcaagtcc 24899



to top

>gb|AC164638.4| Mus musculus BAC clone RP23-198N12 from chromosome 7, complete sequence
          Length = 242297

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    catacaacacataacaaatt 78
             ||||||||||||||||||||
Sbjct: 69968 catacaacacataacaaatt 69949



to top

>emb|AL132969.2|ATF8J2 Arabidopsis thaliana DNA chromosome 3, BAC clone F8J2
          Length = 99814

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    cattaacatacaacacataa 72
             ||||||||||||||||||||
Sbjct: 99133 cattaacatacaacacataa 99152



to top

>gb|AC119750.2| Homo sapiens chromosome 1 clone RP11-459K23, complete sequence
          Length = 171596

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 337   tgtgacaattcaatgggaaa 356
             ||||||||||||||||||||
Sbjct: 76120 tgtgacaattcaatgggaaa 76101



to top

>gb|AC099793.2| Homo sapiens chromosome 1 clone RP11-565N2, complete sequence
          Length = 169841

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 337    tgtgacaattcaatgggaaa 356
              ||||||||||||||||||||
Sbjct: 129101 tgtgacaattcaatgggaaa 129082



to top

>gb|AC157819.5| Mus musculus chromosome 3, clone RP24-273H20, complete sequence
          Length = 151601

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   taccgcaatttcttgaaaat 158
             ||||||||||||||||||||
Sbjct: 13926 taccgcaatttcttgaaaat 13907



to top

>emb|Y12736.2|LLCPJW565 Lactococcus lactis subsp. cremoris plasmid pJW565 DNA, LlaBIIM,
            LlaBIIR genes and orfX
          Length = 12828

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  aatttcttgaaaatacacta 164
            ||||||||||||||||||||
Sbjct: 8201 aatttcttgaaaatacacta 8182



to top

>gb|AC103937.16| Mus musculus chromosome 3, clone RP23-229C5, complete sequence
          Length = 179805

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   taccgcaatttcttgaaaat 158
             ||||||||||||||||||||
Sbjct: 87184 taccgcaatttcttgaaaat 87165



to top

>emb|BX001020.6| Mouse DNA sequence from clone RP23-167B1 on chromosome 4, complete
             sequence
          Length = 74555

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 346   tcaatgggaaaggaagctcttggc 369
             ||||||||||| ||||||||||||
Sbjct: 32964 tcaatgggaaaagaagctcttggc 32941


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,247,760
Number of Sequences: 3902068
Number of extensions: 5247760
Number of successful extensions: 91700
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91582
Number of HSP's gapped (non-prelim): 118
length of query: 673
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 650
effective length of database: 17,143,297,704
effective search space: 11143143507600
effective search space used: 11143143507600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top