>dbj|AK072045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108A03, full
            insert sequence
          Length = 1757

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 107/131 (81%)
 Strand = Plus / Minus

                                                                        
Query: 354  tcctgataccatcaaaccaatctttctgaaaaggaagccaggcccattacagcaagtaaa 413
            ||||||| ||||||||||||| | || |||| |||||||||| ||| || ||||| ||  
Sbjct: 1238 tcctgattccatcaaaccaatttgtccgaaatggaagccagggccactagagcaaatagg 1179

                                                                        
Query: 414  caaagcaacgacaatgcatccacgatgccaaatgaagactccgcaaggaagtagatcttg 473
            ||||| || || ||  ||||||| |||||||| ||||| || | ||| ||||||||||||
Sbjct: 1178 caaagtaatgaaaagacatccacaatgccaaaagaagattctgtaagaaagtagatcttg 1119

                       
Query: 474  tgcttgctagg 484
            || ||| ||||
Sbjct: 1118 tggttgttagg 1108

>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0035J16, complete sequence
          Length = 170233

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 103/126 (81%)
 Strand = Plus / Minus

                                                                         
Query: 359   ataccatcaaaccaatctttctgaaaaggaagccaggcccattacagcaagtaaacaaag 418
             |||||||||||||||| | || |||| |||||||||| ||| || ||||| ||  |||||
Sbjct: 46810 ataccatcaaaccaatttgtccgaaatggaagccagggccactagagcaaataggcaaag 46751

                                                                         
Query: 419   caacgacaatgcatccacgatgccaaatgaagactccgcaaggaagtagatcttgtgctt 478
              || || ||  ||||||| |||||||| ||||| || | ||| |||||||||||||| ||
Sbjct: 46750 taatgaaaagacatccacaatgccaaaagaagattctgtaagaaagtagatcttgtggtt 46691

                   
Query: 479   gctagg 484
             | ||||
Sbjct: 46690 gttagg 46685

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 103/126 (81%)
 Strand = Plus / Minus

                                                                            
Query: 359      ataccatcaaaccaatctttctgaaaaggaagccaggcccattacagcaagtaaacaaag 418
                |||||||||||||||| | || |||| |||||||||| ||| || ||||| ||  |||||
Sbjct: 19343461 ataccatcaaaccaatttgtccgaaatggaagccagggccactagagcaaataggcaaag 19343402

                                                                            
Query: 419      caacgacaatgcatccacgatgccaaatgaagactccgcaaggaagtagatcttgtgctt 478
                 || || ||  ||||||| |||||||| ||||| || | ||| |||||||||||||| ||
Sbjct: 19343401 taatgaaaagacatccacaatgccaaaagaagattctgtaagaaagtagatcttgtggtt 19343342

                      
Query: 479      gctagg 484
                | ||||
Sbjct: 19343341 gttagg 19343336

>gb|AC182700.2| Populus trichocarpa clone Pop1-73H20, complete sequence
          Length = 90044

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 365  tcaaaccaatctttctgaaaag 386
            ||||||||||||||||||||||
Sbjct: 6647 tcaaaccaatctttctgaaaag 6626

>ref|XM_759547.1| Theileria parva strain Muguga hypothetical protein (TP02_0071)
           partial mRNA
          Length = 882

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 354 tcctgataccatcaaaccaat 374
           |||||||||||||||||||||
Sbjct: 873 tcctgataccatcaaaccaat 853

>gb|AC078981.19| Homo sapiens 3 BAC RP11-666A9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160577

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    aaatggttagtggtcatttga 116
             |||||||||||||||||||||
Sbjct: 95899 aaatggttagtggtcatttga 95879

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 278    ccccaaaattgattgtggaaatcac 302
              |||| ||||||||||||||||||||
Sbjct: 697746 ccccgaaattgattgtggaaatcac 697722

>gb|AC108026.5| Homo sapiens BAC clone RP11-41E15 from 4, complete sequence
          Length = 123902

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 155   attttggatgttattcttttg 175
             |||||||||||||||||||||
Sbjct: 90491 attttggatgttattcttttg 90471

>gb|AC108030.4| Homo sapiens BAC clone RP11-100C9 from 4, complete sequence
          Length = 147091

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 299    tcacagttttgaataacatgc 319
              |||||||||||||||||||||
Sbjct: 143878 tcacagttttgaataacatgc 143898

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 278    ccccaaaattgattgtggaaatcac 302
              |||| ||||||||||||||||||||
Sbjct: 697746 ccccgaaattgattgtggaaatcac 697722

>emb|BX000511.2|CNS08CE1 Oryza sativa chromosome 12, . BAC OJ1136_E08 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 118211

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 278   ccccaaaattgattgtggaaatcac 302
             |||| ||||||||||||||||||||
Sbjct: 81388 ccccgaaattgattgtggaaatcac 81412

>emb|AL928689.7| Mouse DNA sequence from clone RP23-35P3 on chromosome 2, complete
            sequence
          Length = 182529

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 282  aaaattgattgtggaaatcac 302
            |||||||||||||||||||||
Sbjct: 6621 aaaattgattgtggaaatcac 6641

>ref|NM_117664.2| Arabidopsis thaliana unknown protein AT4G15730 mRNA, complete cds
          Length = 4372

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 gaatcatgctgtacaaagaa 202
           ||||||||||||||||||||
Sbjct: 664 gaatcatgctgtacaaagaa 683

>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 15      taataaacagggctaataaa 34
               ||||||||||||||||||||
Sbjct: 1673243 taataaacagggctaataaa 1673262

>gb|BT017993.1| Zea mays clone EL01N0526C07.c mRNA sequence
          Length = 1109

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 286 ttgattgtggaaatcacagt 305
           ||||||||||||||||||||
Sbjct: 505 ttgattgtggaaatcacagt 486

>gb|BC074209.1| Xenopus laevis MGC83366 protein, mRNA (cDNA clone MGC:83366
            IMAGE:6866558), complete cds
          Length = 3373

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 268  tcccatgatgccccaaaatt 287
            ||||||||||||||||||||
Sbjct: 2376 tcccatgatgccccaaaatt 2357

>ref|XM_415719.1| PREDICTED: Gallus gallus LOC417471 (LOC417471), mRNA
          Length = 2010

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 363 catcaaaccaatctttctga 382
           ||||||||||||||||||||
Sbjct: 510 catcaaaccaatctttctga 491

>gb|AC005913.2| Homo sapiens Xp22-175-176 BAC GSHB-484O17 (Genome Systems Human BAC
              Library) complete sequence
          Length = 147124

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    ggattttggatgttattctt 172
              ||||||||||||||||||||
Sbjct: 135411 ggattttggatgttattctt 135430

>emb|Z97339.2|ATFCA4 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 4
          Length = 205065

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    gaatcatgctgtacaaagaa 202
              ||||||||||||||||||||
Sbjct: 125077 gaatcatgctgtacaaagaa 125058

>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 155     attttggatgttattctttt 174
               ||||||||||||||||||||
Sbjct: 3213513 attttggatgttattctttt 3213494

>emb|AL161542.2|ATCHRIV42 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 42
          Length = 195068

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   gaatcatgctgtacaaagaa 202
             ||||||||||||||||||||
Sbjct: 82131 gaatcatgctgtacaaagaa 82112

>gb|BT006487.1| Arabidopsis thaliana At4g15730 gene, complete cds
          Length = 3180

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 gaatcatgctgtacaaagaa 202
           ||||||||||||||||||||
Sbjct: 246 gaatcatgctgtacaaagaa 265

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 278    ccccaaaattgattgtggaaatca 301
              |||| |||||||||||||||||||
Sbjct: 653830 ccccgaaattgattgtggaaatca 653807

>gb|AC010878.4| Homo sapiens BAC clone RP11-230E20 from 2, complete sequence
          Length = 154115

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   ctgctcccatgatgccccaa 283
             ||||||||||||||||||||
Sbjct: 30444 ctgctcccatgatgccccaa 30463

>emb|AL928693.9| Mouse DNA sequence from clone RP23-407K8 on chromosome 2, complete
             sequence
          Length = 206478

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   ctgtacaaagaaattacaaa 210
             ||||||||||||||||||||
Sbjct: 57103 ctgtacaaagaaattacaaa 57122

>dbj|AK117862.1| Arabidopsis thaliana At4g15730 mRNA for unknown protein, complete
           cds, clone: RAFL19-03-A02
          Length = 3952

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 gaatcatgctgtacaaagaa 202
           ||||||||||||||||||||
Sbjct: 664 gaatcatgctgtacaaagaa 683

>gb|AY109023.1| Zea mays PCO067561 mRNA sequence
          Length = 789

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 286 ttgattgtggaaatcacagt 305
           ||||||||||||||||||||
Sbjct: 765 ttgattgtggaaatcacagt 746

>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome
          Length = 1830138

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 15      taataaacagggctaataaa 34
               ||||||||||||||||||||
Sbjct: 1424810 taataaacagggctaataaa 1424791

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 278    ccccaaaattgattgtggaaatca 301
              |||| |||||||||||||||||||
Sbjct: 653830 ccccgaaattgattgtggaaatca 653807

>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 181322

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 278   ccccaaaattgattgtggaaatca 301
             |||| |||||||||||||||||||
Sbjct: 89142 ccccgaaattgattgtggaaatca 89165

>emb|CT025635.2| Pan troglodytes chromosome X clone RP43-046H06 map Xq28, complete
             sequence
          Length = 167178

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   ggattttggatgttattctt 172
             ||||||||||||||||||||
Sbjct: 22802 ggattttggatgttattctt 22783


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,754,341
Number of Sequences: 3902068
Number of extensions: 4754341
Number of successful extensions: 94882
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94672
Number of HSP's gapped (non-prelim): 210
length of query: 501
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 479
effective length of database: 17,147,199,772
effective search space: 8213508690788
effective search space used: 8213508690788
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)