ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal14a04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC164537.3| Mus musculus chromosome 7, clone RP23-68N11, comp... 46 0.10
2emb|AL023754.1|HS272L16 Human DNA sequence from clone RP1-272L16... 46 0.10
3emb|AL450336.7| Human DNA sequence from clone RP11-24C14 on chro... 44 0.40
4gb|AC160116.2| Mus musculus BAC clone RP23-456L15 from chromosom... 44 0.40
5gb|AC168217.2| Mus musculus BAC clone RP24-498P8 from chromosome... 42 1.6
6gb|AC168883.3| Mus musculus 10 BAC RP23-406F5 (Roswell Park Canc... 42 1.6
7gb|AC096082.6| Rattus norvegicus 13 BAC CH230-11O17 (Children's ... 42 1.6
8emb|AL451137.8| Human DNA sequence from clone RP11-18A15 on chro... 42 1.6
9emb|AL031772.6|HS225E12 Human DNA sequence from clone RP1-225E12... 42 1.6
10gb|AC158621.9| Mus musculus 10 BAC RP23-294J10 (Roswell Park Can... 42 1.6
11gb|AC137678.11| Mus musculus chromosome 9, clone RP24-484G16, co... 42 1.6
12tpe|BN000431.1| TPA: TPA_inf: Drosophila pseudoobscura mod(mdg4)... 42 1.6
13ref|NM_005241.1| Homo sapiens ecotropic viral integration site 1... 40 6.2
14ref|XM_516864.1| PREDICTED: Pan troglodytes similar to ecotropic... 40 6.2
15gb|AC153152.4| Mus musculus BAC clone RP23-78F1 from chromosome ... 40 6.2
16gb|AC122548.10| Mus musculus chromosome 19, clone RP23-273O15, c... 40 6.2
17ref|XM_610719.2| PREDICTED: Bos taurus similar to ecotropic vira... 40 6.2
18ref|XM_545272.2| PREDICTED: Canis familiaris similar to ecotropi... 40 6.2
19gb|AC117630.11| Mus musculus chromosome 9, clone RP23-181A16, co... 40 6.2
20gb|AC131521.5| Rattus norvegicus 2 BAC CH230-275M7 (Children's H... 40 6.2
21emb|X54989.1|MMEVI1A Homo sapiens Evi-1 mRNA 40 6.2
22emb|BX647613.1|HSM807759 Homo sapiens mRNA; cDNA DKFZp313A2019 (... 40 6.2
23emb|BX640908.1|HSM807045 Homo sapiens mRNA; cDNA DKFZp686J18113 ... 40 6.2
24emb|AL031582.1|DMC118B3 Drosophila melanogaster cosmid clone 118B3 40 6.2
25emb|AJ318464.1|MMU318464 Mus musculus Rpgr gene for retinitis pi... 40 6.2
26dbj|BS000648.1| Pan troglodytes chromosome Y clone:PTB-526G10, c... 40 6.2
27gb|AC010061.6| Drosophila melanogaster 3L BAC RP98-11F16 (Roswel... 40 6.2
28gb|AC091227.3| Drosophila melanogaster 3L BAC RP98-17F24 (Roswel... 40 6.2
29tpg|BK002151.1| TPA: TPA_inf: Drosophila melanogaster HDC10259 (... 40 6.2
30gb|AC078985.14| Homo sapiens 3q BAC RP11-82C9 (Roswell Park Canc... 40 6.2
31gb|AC004681.3| Arabidopsis thaliana chromosome 2 clone T26B15 ma... 40 6.2
32gb|AC104602.3| Drosophila melanogaster X BAC RP98-16G6 (Roswell ... 40 6.2
33gb|AC154456.2| Mus musculus BAC clone RP23-186O10 from chromosom... 40 6.2
34gb|S69002.1| AML1-EVI-1=AML1-EVI-1 fusion protein {rearranged tr... 40 6.2
35gb|AC154588.2| Mus musculus BAC clone RP23-363L9 from chromosome... 40 6.2
36gb|AC092247.1|AC092247 Drosophila melanogaster, chromosome 2L, r... 40 6.2
37dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
38dbj|AP006436.1| Sus scrofa CC chemokine receptor genes(CCR3, CCR... 40 6.2
39gb|AC009407.8| Homo sapiens BAC clone RP11-223I10 from 2, comple... 40 6.2
40ref|XM_226987.3| PREDICTED: Rattus norvegicus ecotropic viral in... 40 6.2
41dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
42gb|AC149606.6| Mus musculus BAC clone RP23-466P2 from 7, complet... 40 6.2
43gb|AE003646.3| Drosophila melanogaster chromosome 2L, section 55... 40 6.2
44gb|AE003531.3| Drosophila melanogaster chromosome 3L, section 54... 40 6.2
45gb|AC002327.1|AC002327 Mus musculus chromosome 7, clone 19K5, co... 40 6.2
46gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 o... 40 6.2
47emb|AL824707.7| Mouse DNA sequence from clone RP23-95O1 on chrom... 40 6.2
48gb|AC167980.2| Mus musculus BAC clone RP23-28M3 from chromosome ... 40 6.2
49emb|X94213.1|RNTHYBIN5 R.norvegicus DNA for thyroid hormone rece... 40 6.2
50emb|AL671042.10| Mouse DNA sequence from clone RP23-382O24 on ch... 40 6.2 
>gb|AC164537.3| Mus musculus chromosome 7, clone RP23-68N11, complete sequence
          Length = 153418

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 262   caaacctctttccaacttcctcc 284
             |||||||||||||||||||||||
Sbjct: 19836 caaacctctttccaacttcctcc 19814
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>emb|AL023754.1|HS272L16 Human DNA sequence from clone RP1-272L16 on chromosome 1q32.1-32.3
             Contains a novel gene, the CAMK1G gene for
             calcium/calmodulin-dependent protein kinase IG  and the 3'
             end of the LAMB3 gene for laminin beta 3, complete
             sequence
          Length = 157875

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 313   caggaacaggaccaaaagcaaaa 335
             |||||||||||||||||||||||
Sbjct: 80639 caggaacaggaccaaaagcaaaa 80661
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>emb|AL450336.7| Human DNA sequence from clone RP11-24C14 on chromosome 6, complete
             sequence
          Length = 125507

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 438   aacagaccaaaccaaaccacaa 459
             ||||||||||||||||||||||
Sbjct: 56226 aacagaccaaaccaaaccacaa 56247
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>gb|AC160116.2| Mus musculus BAC clone RP23-456L15 from chromosome 9, complete sequence
          Length = 182041

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 431   tgaatagaacagaccaaaccaaacca 456
             ||||||||||||| ||||||||||||
Sbjct: 87383 tgaatagaacagaacaaaccaaacca 87408
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>gb|AC168217.2| Mus musculus BAC clone RP24-498P8 from chromosome 9, complete sequence
          Length = 171426

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 324    ccaaaagcaaaaaacaacaga 344
              |||||||||||||||||||||
Sbjct: 117257 ccaaaagcaaaaaacaacaga 117277
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>gb|AC168883.3| Mus musculus 10 BAC RP23-406F5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 171839

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 46     acgcaaacaacacaagcacat 66
              |||||||||||||||||||||
Sbjct: 116444 acgcaaacaacacaagcacat 116464
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>gb|AC096082.6| Rattus norvegicus 13 BAC CH230-11O17 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 209228

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 432    gaatagaacagaccaaaccaaacca 456
              |||||||||| ||||||||||||||
Sbjct: 195480 gaatagaacaaaccaaaccaaacca 195456
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>emb|AL451137.8| Human DNA sequence from clone RP11-18A15 on chromosome 9 Contains a CpG
              island, complete sequence
          Length = 162837

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 433    aatagaacagaccaaaccaaa 453
              |||||||||||||||||||||
Sbjct: 109645 aatagaacagaccaaaccaaa 109625
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>emb|AL031772.6|HS225E12 Human DNA sequence from clone RP1-225E12 on chromosome 6q24 Contains the
              gene for hHDC for homolog of Drosophila headcase (LOC51696)
              and part of a novel gene, complete sequence
          Length = 126464

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 325    caaaagcaaaaaacaacagaa 345
              |||||||||||||||||||||
Sbjct: 124635 caaaagcaaaaaacaacagaa 124615
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>gb|AC158621.9| Mus musculus 10 BAC RP23-294J10 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 172764

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 46    acgcaaacaacacaagcacat 66
             |||||||||||||||||||||
Sbjct: 39646 acgcaaacaacacaagcacat 39666
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>gb|AC137678.11| Mus musculus chromosome 9, clone RP24-484G16, complete sequence
          Length = 172337

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 324    ccaaaagcaaaaaacaacaga 344
              |||||||||||||||||||||
Sbjct: 170430 ccaaaagcaaaaaacaacaga 170410
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>tpe|BN000431.1| TPA: TPA_inf: Drosophila pseudoobscura mod(mdg4) gene for modifier of
            mdg4, exons 1-5
          Length = 27000

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 86   tgaaatgaaactaaccaaaag 106
            |||||||||||||||||||||
Sbjct: 8867 tgaaatgaaactaaccaaaag 8847
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>ref|NM_005241.1| Homo sapiens ecotropic viral integration site 1 (EVI1), mRNA
          Length = 3570

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 49  caaacaacacaagcacatcc 68
           ||||||||||||||||||||
Sbjct: 792 caaacaacacaagcacatcc 811
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>ref|XM_516864.1| PREDICTED: Pan troglodytes similar to ecotropic viral integration
            site 1; oncogene EVI1 (LOC460837), mRNA
          Length = 2679

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   caaacaacacaagcacatcc 68
            ||||||||||||||||||||
Sbjct: 1047 caaacaacacaagcacatcc 1066
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>gb|AC153152.4| Mus musculus BAC clone RP23-78F1 from chromosome 12, complete sequence
          Length = 184523

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   aggcctagcaaacctctttc 273
             ||||||||||||||||||||
Sbjct: 99644 aggcctagcaaacctctttc 99663
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>gb|AC122548.10| Mus musculus chromosome 19, clone RP23-273O15, complete sequence
          Length = 189169

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 443   accaaaccaaaccacaacct 462
             ||||||||||||||||||||
Sbjct: 22994 accaaaccaaaccacaacct 22975
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>ref|XM_610719.2| PREDICTED: Bos taurus similar to ecotropic viral integration site 1
            (LOC532209), mRNA
          Length = 5036

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   caaacaacacaagcacatcc 68
            ||||||||||||||||||||
Sbjct: 1026 caaacaacacaagcacatcc 1045
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>ref|XM_545272.2| PREDICTED: Canis familiaris similar to ecotropic viral integration
            site 1 (LOC488148), mRNA
          Length = 5375

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   caaacaacacaagcacatcc 68
            ||||||||||||||||||||
Sbjct: 1293 caaacaacacaagcacatcc 1312
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>gb|AC117630.11| Mus musculus chromosome 9, clone RP23-181A16, complete sequence
          Length = 245165

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 299    ctgactaagtcatgcaggaa 318
              ||||||||||||||||||||
Sbjct: 236858 ctgactaagtcatgcaggaa 236877
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>gb|AC131521.5| Rattus norvegicus 2 BAC CH230-275M7 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 191106

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 209  aacatagcaaaatcctttcatatg 232
            |||||||||||| |||||||||||
Sbjct: 6651 aacatagcaaaagcctttcatatg 6674
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>emb|X54989.1|MMEVI1A Homo sapiens Evi-1 mRNA
          Length = 3570

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 49  caaacaacacaagcacatcc 68
           ||||||||||||||||||||
Sbjct: 792 caaacaacacaagcacatcc 811
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>emb|BX647613.1|HSM807759 Homo sapiens mRNA; cDNA DKFZp313A2019 (from clone DKFZp313A2019)
          Length = 5480

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   caaacaacacaagcacatcc 68
            ||||||||||||||||||||
Sbjct: 1458 caaacaacacaagcacatcc 1477
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>emb|BX640908.1|HSM807045 Homo sapiens mRNA; cDNA DKFZp686J18113 (from clone DKFZp686J18113)
          Length = 5795

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   caaacaacacaagcacatcc 68
            ||||||||||||||||||||
Sbjct: 1726 caaacaacacaagcacatcc 1745
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>emb|AL031582.1|DMC118B3 Drosophila melanogaster cosmid clone 118B3
          Length = 24263

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 436  agaacagaccaaaccaaacc 455
            ||||||||||||||||||||
Sbjct: 3296 agaacagaccaaaccaaacc 3315
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>emb|AJ318464.1|MMU318464 Mus musculus Rpgr gene for retinitis pigmentosa GTPase regulator, exons
             1-19
          Length = 109632

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   accaaaagcaaaaaacaaca 342
             ||||||||||||||||||||
Sbjct: 36078 accaaaagcaaaaaacaaca 36059
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>dbj|BS000648.1| Pan troglodytes chromosome Y clone:PTB-526G10, complete sequences
          Length = 135606

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 436   agaacagaccaaaccaaaccacaa 459
             |||||| |||||||||||||||||
Sbjct: 46670 agaacaaaccaaaccaaaccacaa 46647
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>gb|AC010061.6| Drosophila melanogaster 3L BAC RP98-11F16 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 165318

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 325  caaaagcaaaaaacaacaga 344
            ||||||||||||||||||||
Sbjct: 3708 caaaagcaaaaaacaacaga 3727
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>gb|AC091227.3| Drosophila melanogaster 3L BAC RP98-17F24 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 163514

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 325    caaaagcaaaaaacaacaga 344
              ||||||||||||||||||||
Sbjct: 105804 caaaagcaaaaaacaacaga 105823
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>tpg|BK002151.1| TPA: TPA_inf: Drosophila melanogaster HDC10259 (HDC10259) gene,
           complete cds
          Length = 1680

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 325 caaaagcaaaaaacaacaga 344
           ||||||||||||||||||||
Sbjct: 755 caaaagcaaaaaacaacaga 774
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>gb|AC078985.14| Homo sapiens 3q BAC RP11-82C9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 180982

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    caaacaacacaagcacatcc 68
             ||||||||||||||||||||
Sbjct: 94796 caaacaacacaagcacatcc 94777
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>gb|AC004681.3| Arabidopsis thaliana chromosome 2 clone T26B15 map TEn5, complete
             sequence
          Length = 78732

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    gaaatgaaactaaccaaaag 106
             ||||||||||||||||||||
Sbjct: 64886 gaaatgaaactaaccaaaag 64867
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>gb|AC104602.3| Drosophila melanogaster X BAC RP98-16G6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 161668

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   agaacagaccaaaccaaacc 455
             ||||||||||||||||||||
Sbjct: 86755 agaacagaccaaaccaaacc 86774
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>gb|AC154456.2| Mus musculus BAC clone RP23-186O10 from chromosome 16, complete
             sequence
          Length = 193598

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    ttctttcaggtacttcccaa 29
             ||||||||||||||||||||
Sbjct: 28962 ttctttcaggtacttcccaa 28981
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>gb|S69002.1| AML1-EVI-1=AML1-EVI-1 fusion protein {rearranged translocation}
            [human, leukemic cell line SKH1, mRNA Mutant, 5938 nt]
          Length = 5938

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   caaacaacacaagcacatcc 68
            ||||||||||||||||||||
Sbjct: 3186 caaacaacacaagcacatcc 3205
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>gb|AC154588.2| Mus musculus BAC clone RP23-363L9 from chromosome 16, complete sequence
          Length = 200787

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    ttctttcaggtacttcccaa 29
             ||||||||||||||||||||
Sbjct: 92624 ttctttcaggtacttcccaa 92605
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>gb|AC092247.1|AC092247 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone
             BACR36B06, complete sequence
          Length = 183436

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 436   agaacagaccaaaccaaacc 455
             ||||||||||||||||||||
Sbjct: 31267 agaacagaccaaaccaaacc 31248
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 90       atgaaactaaccaaaaggtg 109
                ||||||||||||||||||||
Sbjct: 15660927 atgaaactaaccaaaaggtg 15660908
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>dbj|AP006436.1| Sus scrofa CC chemokine receptor genes(CCR3, CCR1, CCXCR1, FYCO1),
             complete and partial cds, clone: 0659A02
          Length = 167298

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   actaagtcatgcaggaacag 321
             ||||||||||||||||||||
Sbjct: 16476 actaagtcatgcaggaacag 16495
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>gb|AC009407.8| Homo sapiens BAC clone RP11-223I10 from 2, complete sequence
          Length = 202568

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 317    aacaggaccaaaagcaaaaaacaa 340
              ||||||| ||||||||||||||||
Sbjct: 159387 aacaggatcaaaagcaaaaaacaa 159364
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>ref|XM_226987.3| PREDICTED: Rattus norvegicus ecotropic viral integration site 1
            (predicted) (Evi1_predicted), mRNA
          Length = 5748

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   caaacaacacaagcacatcc 68
            ||||||||||||||||||||
Sbjct: 1676 caaacaacacaagcacatcc 1695
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>dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0416G11
          Length = 138858

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    atgaaactaaccaaaaggtg 109
             ||||||||||||||||||||
Sbjct: 98824 atgaaactaaccaaaaggtg 98805
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>gb|AC149606.6| Mus musculus BAC clone RP23-466P2 from 7, complete sequence
          Length = 214153

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 17    aggtacttcccaagnaagttata 39
             |||||||||||||| ||||||||
Sbjct: 85671 aggtacttcccaagaaagttata 85693
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>gb|AE003646.3| Drosophila melanogaster chromosome 2L, section 55 of 83 of the complete
              sequence
          Length = 265413

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 436    agaacagaccaaaccaaacc 455
              ||||||||||||||||||||
Sbjct: 229254 agaacagaccaaaccaaacc 229235
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>gb|AE003531.3| Drosophila melanogaster chromosome 3L, section 54 of 83 of the complete
              sequence
          Length = 271869

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 325    caaaagcaaaaaacaacaga 344
              ||||||||||||||||||||
Sbjct: 112159 caaaagcaaaaaacaacaga 112178
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>gb|AC002327.1|AC002327 Mus musculus chromosome 7, clone 19K5, complete sequence
          Length = 159515

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 17    aggtacttcccaagnaagttata 39
             |||||||||||||| ||||||||
Sbjct: 13277 aggtacttcccaagaaagttata 13299
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>gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 of 74 of the complete
             sequence
          Length = 315092

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   agaacagaccaaaccaaacc 455
             ||||||||||||||||||||
Sbjct: 70122 agaacagaccaaaccaaacc 70141
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>emb|AL824707.7| Mouse DNA sequence from clone RP23-95O1 on chromosome 4, complete
             sequence
          Length = 225002

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   ttccaacttcctccatctct 290
             ||||||||||||||||||||
Sbjct: 79993 ttccaacttcctccatctct 80012
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>gb|AC167980.2| Mus musculus BAC clone RP23-28M3 from chromosome 9, complete sequence
          Length = 221376

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   ctgactaagtcatgcaggaa 318
             ||||||||||||||||||||
Sbjct: 94821 ctgactaagtcatgcaggaa 94802
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>emb|X94213.1|RNTHYBIN5 R.norvegicus DNA for thyroid hormone receptor binding site (258bp)
          Length = 258

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 87  gaaatgaaactaaccaaaag 106
           ||||||||||||||||||||
Sbjct: 127 gaaatgaaactaaccaaaag 108
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>emb|AL671042.10| Mouse DNA sequence from clone RP23-382O24 on chromosome X, complete
             sequence
          Length = 186151

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 323   accaaaagcaaaaaacaaca 342
             ||||||||||||||||||||
Sbjct: 51273 accaaaagcaaaaaacaaca 51292


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,973,980
Number of Sequences: 3902068
Number of extensions: 4973980
Number of successful extensions: 142839
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 142635
Number of HSP's gapped (non-prelim): 204
length of query: 462
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 440
effective length of database: 17,147,199,772
effective search space: 7544767899680
effective search space used: 7544767899680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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