ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal13k23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete ... 1007 0.0
2gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete ... 1007 0.0
3gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete ... 1007 0.0
4emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clo... 880 0.0
5emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin 797 0.0
6emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clo... 702 0.0
7emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clo... 613 e-172
8emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clo... 599 e-168
9gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, comple... 547 e-152
10emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clo... 418 e-114
11gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, comple... 285 9e-74
12dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds 206 7e-50
13dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds 192 1e-45
14dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, compl... 113 7e-22
15emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene 80 1e-11
16emb|X70665.1|TAPURB1A T.aestivum mRNA for alpha1-thionin 80 1e-11
17emb|X96448.1|TAPURD1 T.aestivum Pur-D1 gene 80 1e-11
18gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precur... 80 1e-11
19dbj|D84390.1|WHTA1P Wheat gene for alpha-1 purothionin, exon1-3,... 80 1e-11
20dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, compl... 80 1e-11
21emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene 72 2e-09
22emb|Z13008.1|HVBHORD H.vulgare mRNA for beta-hordothionin 62 2e-06
23emb|X05901.1|HVTH1AR Barley mRNA for toxin alpha-hordothionin 58 4e-05
24gb|M23080.1|BLYHORA Hordeum vulgare alpha-hordothionin (Hth-1) g... 58 4e-05
25emb|X96446.1|TACSPUR1B T.aestivum Pur-B1 gene, cultivar Chinese ... 56 1e-04
26emb|X70666.1|TAPURD1A T.aestivum mRNA for alpha2-purothionin 56 1e-04
27gb|AC149153.3| Xenopus tropicalis clone ISB-221D20, complete seq... 42 2.2
28gb|AC121276.9| Mus musculus chromosome 1, clone RP24-249B16, com... 42 2.2
29gb|AC004927.2| Homo sapiens PAC clone RP5-910I17 from 7, complet... 42 2.2
30gb|AC147271.3| Pan troglodytes BAC clone RP43-121F15 from chromo... 42 2.2
31dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
32gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complet... 42 2.2
33dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
34gb|AC115728.11| Mus musculus chromosome 5, clone RP23-31J24, com... 40 8.7
35ref|NG_005425.2| Homo sapiens PHF5A pseudogene 6 (LOC450250) on ... 40 8.7
36gb|AC108951.4| Mus musculus BAC clone RP24-136D23 from 3, comple... 40 8.7
37gb|AC015712.10| Homo sapiens chromosome 15, clone RP11-66B24, co... 40 8.7
38emb|AL161899.21| Human DNA sequence from clone RP11-418I10 on ch... 40 8.7
39emb|AL139801.17| Human DNA sequence from clone RP11-247M1 on chr... 40 8.7
40emb|AL646095.27| Mouse DNA sequence from clone RP23-17P18 on chr... 40 8.7
41dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 40 8.7
42gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, compl... 40 8.7
43gb|AC153659.4| Mus musculus BAC clone RP23-283A3 from chromosome... 40 8.7
44gb|AC026188.6| Homo sapiens chromosome 3 clone RP11-319I18 map 3... 40 8.7
45gb|AC097482.2| Homo sapiens BAC clone RP11-131L11 from 4, comple... 40 8.7
46gb|AC154857.2| Mus musculus BAC clone RP23-16K21 from chromosome... 40 8.7
47gb|AY128102.1| Lycopersicon esculentum isolate vis1-lta small he... 40 8.7
48gb|AY128101.1| Lycopersicon esculentum isolate vis1-hta small he... 40 8.7
49gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6... 40 8.7
50gb|AC008498.3|AC008498 Homo sapiens chromosome 5 clone CTC-436P1... 40 8.7
51dbj|BS000023.1| Pan troglodytes chromosome 22 clone:PTB-018G23, ... 40 8.7
52gb|AC113036.8| Mus musculus chromosome 13, clone RP23-223B10, co... 40 8.7
53gb|AC150897.2| Mus musculus BAC clone RP23-289F7 from 7, complet... 40 8.7
54gb|AY487430.1| Uncultured organism clone 2A15 nitrilase (BD5338)... 40 8.7
55emb|AL591882.12| Mouse DNA sequence from clone RP23-53L16 on chr... 40 8.7
56gb|AC068314.6| Homo sapiens chromosome 3 clone RP11-194D21 map 3... 40 8.7 
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940
          Length = 663

 Score = 1007 bits (508), Expect = 0.0
 Identities = 520/524 (99%)
 Strand = Plus / Minus

                                                                       
Query: 116 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 175
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 470

                                                                       
Query: 176 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 235
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 410

                                                                       
Query: 236 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 350

                                                                       
Query: 296 catgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttc 355
           |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 349 catgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttggttc 290

                                                                       
Query: 356 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 230

                                                                       
Query: 416 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 475
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 229 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaacggcaggc 170

                                                                       
Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 535
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 169 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctacttggacctg 110

                                                                       
Query: 536 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 50

                                                       
Query: 596 tgccatggttggctggttggccttaatttctcaagtagaatgag 639
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49  tgccatggttggctggttggccttaatttctcaagtagaatgag 6



 Score =  125 bits (63), Expect = 2e-25
 Identities = 77/82 (93%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttttatattaagnccagggtataaatagattcatcgtggcgactcttattggaacgagg 60
           ||||||||||||| | ||||||||||||||||||||||||   |||||||||||||||||
Sbjct: 640 cttttatattaagccaagggtataaatagattcatcgtgggttctcttattggaacgagg 581

                                 
Query: 61  gaaaaaacagaaatacataact 82
           ||||||||||||||||||||||
Sbjct: 580 gaaaaaacagaaatacataact 559



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 94  acagaaaatgacaaaacgaccttgg 118
           |||||||||||||||||||||||||
Sbjct: 511 acagaaaatgacaaaacgaccttgg 487



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 80  acttcaccatcattacagaaa 100
           |||||||||||||||||||||
Sbjct: 435 acttcaccatcattacagaaa 415
to top
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348
          Length = 608

 Score = 1007 bits (508), Expect = 0.0
 Identities = 520/524 (99%)
 Strand = Plus / Minus

                                                                       
Query: 116 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 175
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 470

                                                                       
Query: 176 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 235
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 410

                                                                       
Query: 236 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 350

                                                                       
Query: 296 catgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttc 355
           |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 349 catgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttggttc 290

                                                                       
Query: 356 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 230

                                                                       
Query: 416 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 475
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 229 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaacggcaggc 170

                                                                       
Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 535
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 169 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctacttggacctg 110

                                                                       
Query: 536 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 50

                                                       
Query: 596 tgccatggttggctggttggccttaatttctcaagtagaatgag 639
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49  tgccatggttggctggttggccttaatttctcaagtagaatgag 6



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 39/39 (100%)
 Strand = Plus / Minus

                                                  
Query: 44  ctcttattggaacgagggaaaaaacagaaatacataact 82
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataact 559



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 94  acagaaaatgacaaaacgaccttgg 118
           |||||||||||||||||||||||||
Sbjct: 511 acagaaaatgacaaaacgaccttgg 487



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 80  acttcaccatcattacagaaa 100
           |||||||||||||||||||||
Sbjct: 435 acttcaccatcattacagaaa 415
to top
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872
          Length = 540

 Score = 1007 bits (508), Expect = 0.0
 Identities = 520/524 (99%)
 Strand = Plus / Minus

                                                                       
Query: 116 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 175
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 470

                                                                       
Query: 176 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 235
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 410

                                                                       
Query: 236 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 350

                                                                       
Query: 296 catgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttc 355
           |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 349 catgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttggttc 290

                                                                       
Query: 356 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 230

                                                                       
Query: 416 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 475
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 229 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaacggcaggc 170

                                                                       
Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 535
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 169 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctacttggacctg 110

                                                                       
Query: 536 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 50

                                                       
Query: 596 tgccatggttggctggttggccttaatttctcaagtagaatgag 639
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49  tgccatggttggctggttggccttaatttctcaagtagaatgag 6



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 94  acagaaaatgacaaaacgaccttgg 118
           |||||||||||||||||||||||||
Sbjct: 511 acagaaaatgacaaaacgaccttgg 487



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 80  acttcaccatcattacagaaa 100
           |||||||||||||||||||||
Sbjct: 435 acttcaccatcattacagaaa 415
to top
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3)
          Length = 544

 Score =  880 bits (444), Expect = 0.0
 Identities = 453/456 (99%)
 Strand = Plus / Minus

                                                                       
Query: 116 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 175
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 397

                                                                       
Query: 176 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 235
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 396 aagaaggcatgattaggcttcaagagactgaatgacttcaccatcattacagaaacgggc 337

                                                                       
Query: 236 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 277

                                                                       
Query: 296 catgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttc 355
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 catgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttc 217

                                                                       
Query: 356 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 157

                                                                       
Query: 416 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 475
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 156 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaacggcaggc 97

                                                                       
Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 535
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 37

                                               
Query: 536 ctccagaactaaacccaatatgagaacacaaataac 571
           ||||||||||||||||||||||||||||||||||||
Sbjct: 36  ctccagaactaaacccaatatgagaacacaaataac 1



 Score =  117 bits (59), Expect = 5e-23
 Identities = 59/59 (100%)
 Strand = Plus / Minus

                                                                      
Query: 24  aaatagattcatcgtggcgactcttattggaacgagggaaaaaacagaaatacataact 82
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aaatagattcatcgtggcgactcttattggaacgagggaaaaaacagaaatacataact 486



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 94  acagaaaatgacaaaacgaccttgg 118
           |||||||||||||||||||||||||
Sbjct: 438 acagaaaatgacaaaacgaccttgg 414



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 80  acttcaccatcattacagaaa 100
           |||||||||||||||||||||
Sbjct: 362 acttcaccatcattacagaaa 342
to top
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin
          Length = 414

 Score =  797 bits (402), Expect = 0.0
 Identities = 411/414 (99%)
 Strand = Plus / Minus

                                                                       
Query: 188 ttaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgttgct 247
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 355

                                                                       
Query: 248 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 307
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 295

                                                                       
Query: 308 aacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 367
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 235

                                                                       
Query: 368 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 427
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 175

                                                                       
Query: 428 acaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcagtt 487
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 174 acaagcagttgcgcagactggtcgggaaccaccggcgaaatggcaggcgttgtagcagtt 115

                                                                       
Query: 488 tctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaa 547
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 tctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaa 55

                                                                 
Query: 548 acccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccat 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54  acccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccat 1
to top
>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3)
          Length = 491

 Score =  702 bits (354), Expect = 0.0
 Identities = 366/370 (98%)
 Strand = Plus / Minus

                                                                       
Query: 116 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 175
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 370 tggtatcaagattgttgaacagaaaatgaaaaaacgaccttggccatagaaatcatgccc 311

                                                                       
Query: 176 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 235
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 251

                                                                       
Query: 236 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 191

                                                                       
Query: 296 catgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttc 355
           || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 caggttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttc 131

                                                                       
Query: 356 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 415
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 130 accggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttat 71

                                                                       
Query: 416 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 11

                     
Query: 476 gttgtagcag 485
           ||||||||||
Sbjct: 10  gttgtagcag 1



 Score =  133 bits (67), Expect = 8e-28
 Identities = 78/82 (95%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttttatattaagnccagggtataaatagattcatcgtggcgactcttattggaacgagg 60
           ||||||||||||| | |||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 481 cttttatattaagccaagggcataaatagattcatcgtggtgactcttattggaacgagg 422

                                 
Query: 61  gaaaaaacagaaatacataact 82
           ||||||||||||||||||||||
Sbjct: 421 gaaaaaacagaaatacataact 400



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 94  acagaaaatgacaaaacgaccttgg 118
           ||||||||||| |||||||||||||
Sbjct: 352 acagaaaatgaaaaaacgaccttgg 328



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 80  acttcaccatcattacagaaa 100
           |||||||||||||||||||||
Sbjct: 276 acttcaccatcattacagaaa 256
to top
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4)
          Length = 658

 Score =  613 bits (309), Expect = e-172
 Identities = 459/509 (90%)
 Strand = Plus / Minus

                                                                       
Query: 116 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 175
           ||||||||||||| || || | |||||||||| ||||||||||||||||||||||||| |
Sbjct: 511 tggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcac 452

                                                                       
Query: 176 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 235
           ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 451 aagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacaaaaacgggc 392

                                                                       
Query: 236 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 295
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 391 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtc 332

                                                                       
Query: 296 catgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttc 355
           |||||||||||| || ||| ||||||||||||| |||||||||| |||  ||| ||||||
Sbjct: 331 catgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttc 272

                                                                       
Query: 356 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 415
           ||||||||||||||||||||| || ||||||||||| ||||| ||| |||| || |||||
Sbjct: 271 accggattcagggagaagattaagtttaggatagtcactagggcattttggaccacttat 212

                                                                       
Query: 416 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 475
           ||||||||||| |||||||  |||||||||||| ||||||||||| ||||||||||| | 
Sbjct: 211 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 152

                                                                       
Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 535
           |||||||||||||||  |   ||||| |||||||||||| || || || || ||||||||
Sbjct: 151 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 92

                                                                       
Query: 536 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 595
           ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| ||| 
Sbjct: 91  ctccagaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgctggg 32

                                        
Query: 596 tgccatggttggctggttggccttaattt 624
           ||||||||||||||  ||||| |||||||
Sbjct: 31  tgccatggttggcttcttggctttaattt 3



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/80 (91%), Gaps = 1/80 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttttatattaagnccagggtataaatagattcatcgtggcgactcttattggaacgagg 60
           ||||||||||||| | |||||| ||||||||||||||||||||| ||||||||||| |||
Sbjct: 622 cttttatattaagccaagggtacaaatagattcatcgtggcgacccttattggaacaagg 563

                               
Query: 61  gaaaaaacagaaatacataa 80
           | |||||||||||| |||||
Sbjct: 562 g-aaaaacagaaatgcataa 544
to top
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4)
          Length = 637

 Score =  599 bits (302), Expect = e-168
 Identities = 446/494 (90%)
 Strand = Plus / Minus

                                                                       
Query: 116 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 175
           ||||||||||||| || || | |||||||||| |||||| |||||||||||||||||| |
Sbjct: 504 tggtatcaagattattcaagacaaaatgacaatacgaccatggccatagaaatcatgcac 445

                                                                       
Query: 176 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 235
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 444 aagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggc 385

                                                                       
Query: 236 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 295
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 384 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtc 325

                                                                       
Query: 296 catgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttc 355
           |||||||||||| || ||| ||||||||||||| ||||||||||  ||  ||| ||||||
Sbjct: 324 catgttgtcacagacagaattcctgcatccaatggtgcagtactgcgtgacatctggttc 265

                                                                       
Query: 356 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 415
           |||||||||||||||||||||||| ||||||||||| ||||| ||| |||| || |||||
Sbjct: 264 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 205

                                                                       
Query: 416 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 475
           ||||||||||| |||||||  |||||||||||| ||||||||||| |||||| |||| | 
Sbjct: 204 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaatggcaagt 145

                                                                       
Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 535
           |||||||||||||||  |   ||||| |||||||||||| || || || || ||||||||
Sbjct: 144 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 85

                                                                       
Query: 536 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 595
           ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| ||| 
Sbjct: 84  ctccagaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgctggg 25

                         
Query: 596 tgccatggttggct 609
           ||||||||||||||
Sbjct: 24  tgccatggttggct 11



 Score =  101 bits (51), Expect = 3e-18
 Identities = 62/66 (93%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttttatattaagnccagggtataaatagattcatcgtggcgactcttattggaacgagg 60
           ||||||||||||| | |||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 615 cttttatattaagccaagggtacaaatagattcatcgtggcgactcttattggaacaagg 556

                 
Query: 61  gaaaaa 66
           ||||||
Sbjct: 555 gaaaaa 550
to top
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds
          Length = 2259

 Score =  547 bits (276), Expect = e-152
 Identities = 282/284 (99%)
 Strand = Plus / Minus

                                                                        
Query: 356  accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 415
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1797 accggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttat 1738

                                                                        
Query: 416  gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1737 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 1678

                                                                        
Query: 476  gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 535
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1677 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 1618

                                                                        
Query: 536  ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 595
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1617 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 1558

                                                        
Query: 596  tgccatggttggctggttggccttaatttctcaagtagaatgag 639
            ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1557 tgccatggttggctggttggccttaatttctcatgtagaatgag 1514



 Score =  337 bits (170), Expect = 3e-89
 Identities = 173/174 (99%)
 Strand = Plus / Minus

                                                                        
Query: 116  tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 175
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2227 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 2168

                                                                        
Query: 176  aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 235
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2167 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 2108

                                                                  
Query: 236  acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaac 289
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2107 acatgcgttgctgcagagtcccatgtcaaatttcatctcttggccacgggaaac 2054



 Score =  131 bits (66), Expect = 3e-27
 Identities = 69/70 (98%)
 Strand = Plus / Minus

                                                                        
Query: 289  cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcat 348
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1963 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcacat 1904

                      
Query: 349  ttggttcacc 358
            ||||||||||
Sbjct: 1903 ttggttcacc 1894



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 94   acagaaaatgacaaaacgaccttgg 118
            |||||||||||||||||||||||||
Sbjct: 2209 acagaaaatgacaaaacgaccttgg 2185



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 80   acttcaccatcattacagaaa 100
            |||||||||||||||||||||
Sbjct: 2133 acttcaccatcattacagaaa 2113
to top
>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2)
          Length = 453

 Score =  418 bits (211), Expect = e-114
 Identities = 301/331 (90%)
 Strand = Plus / Minus

                                                                       
Query: 116 tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 175
           ||||||||||||| || || | |||||||||| ||||||||||||||||||||||||| |
Sbjct: 331 tggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcac 272

                                                                       
Query: 176 aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 235
           ||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 271 aagaaggcatgattaggattcaacagactgaatgactgcaccatcattacaaaaacgggc 212

                                                                       
Query: 236 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtc 295
           |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 211 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccatggaaaacattgtc 152

                                                                       
Query: 296 catgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttc 355
           |||||||||||| || ||| ||||||||||||| |||||||||| |||  |||  |||||
Sbjct: 151 catgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatcgggttc 92

                                                                       
Query: 356 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 415
           ||||||||||||||||||||| || ||||||||||| ||||| ||| |||| || |||||
Sbjct: 91  accggattcagggagaagattaagtttaggatagtcactagggcattttggaccacttat 32

                                          
Query: 416 gattttacaaccacaagcagttgcgcagact 446
           ||||||||||| |||||||  ||||||||||
Sbjct: 31  gattttacaacgacaagcacctgcgcagact 1



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 71/78 (91%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   tttatattaagnccagggtataaatagattcatcgtggcgactcttattggaacgaggga 62
           ||||||||||| | |||||| ||||||||||||||||||||| ||||||||||| |||| 
Sbjct: 440 tttatattaagccaagggtacaaatagattcatcgtggcgacccttattggaacaaggg- 382

                             
Query: 63  aaaaacagaaatacataa 80
           |||||||||||| |||||
Sbjct: 381 aaaaacagaaatgcataa 364
to top
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds
          Length = 2406

 Score =  285 bits (144), Expect = 9e-74
 Identities = 249/284 (87%)
 Strand = Plus / Minus

                                                                        
Query: 356  accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 415
            |||||||||||||||||||||||| ||||||||||| ||||| ||| |||| || |||||
Sbjct: 1776 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 1717

                                                                        
Query: 416  gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 475
            ||||||||||| |||||||  |||||||||||| ||||||||||| ||||||||||| | 
Sbjct: 1716 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 1657

                                                                        
Query: 476  gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 535
            |||||||||||||||  |   ||||| |||||||||||| || || || || ||||||||
Sbjct: 1656 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 1597

                                                                        
Query: 536  ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 595
            ||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||||| ||| 
Sbjct: 1596 ctccagaactaaaaccagtatgagaacacaaatgaccacactcttaatactcttgctggg 1537

                                                        
Query: 596  tgccatggttggctggttggccttaatttctcaagtagaatgag 639
            ||||||||||||||  ||||| |||||||||| || ||||||||
Sbjct: 1536 tgccatggttggcttcttggctttaatttctccagaagaatgag 1493



 Score =  281 bits (142), Expect = 1e-72
 Identities = 166/174 (95%)
 Strand = Plus / Minus

                                                                        
Query: 116  tggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgccc 175
            ||||||||||||| || || | |||||||||| ||||||||||||||||||||||||| |
Sbjct: 2204 tggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcac 2145

                                                                        
Query: 176  aagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggc 235
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2144 aagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggc 2085

                                                                  
Query: 236  acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaac 289
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2084 acatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 2031



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 61/66 (92%)
 Strand = Plus / Minus

                                                                        
Query: 1    cttttatattaagnccagggtataaatagattcatcgtggcgactcttattggaacgagg 60
            ||||||||||||| | |||||| ||||||||||||||||||||||||| ||||||| |||
Sbjct: 2315 cttttatattaagccaagggtacaaatagattcatcgtggcgactcttgttggaacaagg 2256

                  
Query: 61   gaaaaa 66
            ||||||
Sbjct: 2255 gaaaaa 2250



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                        
Query: 289  cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcat 348
            ||||||||||||||||||| || ||| || |||||||||| |||||||||| |||  |||
Sbjct: 1937 cattgtccatgttgtcacagacagaattcgtgcatccaatggtgcagtactgagtgacat 1878

                      
Query: 349  ttggttcacc 358
             |||||||||
Sbjct: 1877 ctggttcacc 1868
to top
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds
          Length = 641

 Score =  206 bits (104), Expect = 7e-50
 Identities = 367/454 (80%), Gaps = 3/454 (0%)
 Strand = Plus / Minus

                                                                       
Query: 151 gaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagactgaatga 210
           ||||| ||||| ||||||||||| |||||  ||||||||| ||||  | |||  ||||||
Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagcttggaaagatggaatga 437

                                                                       
Query: 211 cttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttca 270
           |  |||| |  |||||||||||  ||||| | ||| ||||||||  |||||||| |||||
Sbjct: 436 cggcacccttgttacagaaacgaacacattctttgttgcagagtagcatgtcgattttca 377

                                                                       
Query: 271 tctcttggccacgggaaacattgtccatgttgtcacaaacggaagtcctgcatccaattg 330
           ||||||||||| |   ||||||||||||||||||||||||||||||| ||||||| || |
Sbjct: 376 tctcttggccatgaataacattgtccatgttgtcacaaacggaagtcatgcatcctatgg 317

                                                                       
Query: 331 tgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttaggatagt 390
           |||||||||||||  |||  ||||||||||||||| | ||||||| ||| |||| |||| 
Sbjct: 316 tgcagtactcagtgacatccggttcaccggattcaagtagaagatgcagtttagaatagc 257

                                                                       
Query: 391 ccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcagactggtc 450
           |   ||||||||||   |||  || ||||||||| ||||||  || |||||||  ||| |
Sbjct: 256 catcaggacatgtt---ccgtctacgattttacatccacaaagagatgcgcagcgtggcc 200

                                                                       
Query: 451 gggaaccaccggcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagc 510
           |||||  |||||  ||||||||| |||| |||||||||||  | |  ||| ||  |||||
Sbjct: 199 gggaagtaccggttaaacggcagacgttatagcagtttcttgcagatgtgctcgggcagc 140

                                                                       
Query: 511 aactcttgccttctacttggacctgctccagaactaaacccaatatgagaacacaaataa 570
           ||||||| || ||||| ||||||||| ||||||||||||| | || ||| |||||||  |
Sbjct: 139 aactctttccctctacctggacctgccccagaactaaacctagtacgaggacacaaagca 80

                                             
Query: 571 ccacgctcttaatactcttgttggttgccatggt 604
           |||| | ||||| ||  ||| |||||||||||||
Sbjct: 79  ccacacacttaagacctttggtggttgccatggt 46
to top
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds
          Length = 678

 Score =  192 bits (97), Expect = 1e-45
 Identities = 259/313 (82%)
 Strand = Plus / Minus

                                                                       
Query: 297 atgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttca 356
           ||||||||||||||||||||| |||||||||| |||||||||||||  |||| || ||||
Sbjct: 386 atgttgtcacaaacggaagtcatgcatccaatagtgcagtactcagctgcatctgcttca 327

                                                                       
Query: 357 ccggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttatg 416
           ||| |||||| |||||||| | | |||||  | || || ||||| ||||   ||  || |
Sbjct: 326 ccgtattcagagagaagatgctgtttaggccaatcacttggacaagttgtaacgtctaag 267

                                                                       
Query: 417 attttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcg 476
           | |||||||||||| | |  |||||||||||| || | | |||| || ||||||||| | 
Sbjct: 266 agtttacaaccacatggacctgcgcagactgggcgcggagcaccagctaaacggcagaca 207

                                                                       
Query: 477 ttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgc 536
           |||||||||||| |  |||||||| ||||||||||||||||||| ||||| |||||||||
Sbjct: 206 ttgtagcagtttattgccgtcgtgctcttgcagcaactcttgccctctacctggacctgc 147

                                                                       
Query: 537 tccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggtt 596
           ||||||||||||||||  ||||| | |||||||||  | ||||| |||| |||| | || 
Sbjct: 146 tccagaactaaacccagcatgaggaaacaaataacagcactcttgatacccttgcttgtg 87

                        
Query: 597 gccatggttggct 609
           |||||||||||||
Sbjct: 86  gccatggttggct 74



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 118/144 (81%)
 Strand = Plus / Minus

                                                                       
Query: 140 aatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaac 199
           |||| |||||||||| ||||||||||||| | || | |||  ||||||||||||  | ||
Sbjct: 558 aatggcaaaacgaccatggccatagaaataaggcacgagagtgcatgattaggccccgac 499

                                                                       
Query: 200 agactgaatgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccat 259
           |||  || ||||  |||| |  |||||||||||| ||||||||||| |||||| |  |||
Sbjct: 498 agatggattgacggcacccttgttacagaaacggacacatgcgttgttgcagacttgcat 439

                                   
Query: 260 gtcgaatttcatctcttggccacg 283
           |||||  |||||||||||||||||
Sbjct: 438 gtcgatgttcatctcttggccacg 415
to top
>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds
          Length = 616

 Score =  113 bits (57), Expect = 7e-22
 Identities = 114/133 (85%)
 Strand = Plus / Minus

                                                                       
Query: 475 cgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacct 534
           ||||||||||||||||  |||| |||| ||||||||||||||| || ||||||||||| |
Sbjct: 149 cgttgtagcagtttcttgccgtggtgtccttgcagcaactctttccctctacttggacat 90

                                                                       
Query: 535 gctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttgg 594
           ||||||||||||  |||||||  ||||||||||| ||||| ||||||| || |||| |  
Sbjct: 89  gctccagaactatccccaatacaagaacacaaatgaccacactcttaagacccttgatac 30

                        
Query: 595 ttgccatggttgg 607
           || ||||||||||
Sbjct: 29  ttcccatggttgg 17
to top
>emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene
          Length = 892

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                       
Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 535
           ||||||||||||||| ||    ||| |||||||||||||||||||||||||||| |||||
Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 73

                                   
Query: 536 ctccagaactaaacccaatatgag 559
            |||||||| || |||| ||||||
Sbjct: 72  ttccagaaccaaccccagtatgag 49
to top
>emb|X70665.1|TAPURB1A T.aestivum mRNA for alpha1-thionin
          Length = 641

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                       
Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 535
           ||||||||||||||| |||   ||| || ||||||||||||||||||||||||| |||||
Sbjct: 189 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 130

                                   
Query: 536 ctccagaactaaacccaatatgag 559
            |||||||| || |||| ||||||
Sbjct: 129 ttccagaaccaaccccagtatgag 106
to top
>emb|X96448.1|TAPURD1 T.aestivum Pur-D1 gene
          Length = 901

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                       
Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 535
           ||||||||||||||| |||   ||| || ||||||||||||||||||||||||| |||||
Sbjct: 132 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 73

                                   
Query: 536 ctccagaactaaacccaatatgag 559
            |||||||| || |||| ||||||
Sbjct: 72  ttccagaaccaaccccagtatgag 49
to top
>gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precursor, mRNA, complete cds
          Length = 673

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                       
Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 535
           ||||||||||||||| ||    ||| |||||||||||||||||||||||||||| |||||
Sbjct: 140 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 81

                                   
Query: 536 ctccagaactaaacccaatatgag 559
            |||||||| || |||| ||||||
Sbjct: 80  ttccagaaccaaccccagtatgag 57
to top
>dbj|D84390.1|WHTA1P Wheat gene for alpha-1 purothionin, exon1-3, complete cds
          Length = 915

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                       
Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 535
           ||||||||||||||| |||   ||| || ||||||||||||||||||||||||| |||||
Sbjct: 177 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 118

                                   
Query: 536 ctccagaactaaacccaatatgag 559
            |||||||| || |||| ||||||
Sbjct: 117 ttccagaaccaaccccagtatgag 94
to top
>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds
          Length = 677

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                       
Query: 503 cttgcagcaactcttgccttctacttggacctgctccagaactaaacccaatatgagaac 562
           ||||||||||||||| || |||||||||||||||||||||||||  |||||||  || ||
Sbjct: 122 cttgcagcaactctttccctctacttggacctgctccagaactatccccaatacaaggac 63

                               
Query: 563 acaaataaccacgctcttaa 582
           |||||| || || |||||||
Sbjct: 62  acaaatgactacactcttaa 43
to top
>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene
          Length = 897

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Minus

                                                                       
Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 535
           ||||||||||||||| ||    ||| |||||||||||||||| ||||||||||| |||||
Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactctttccttctacttgcacctg 73

                                   
Query: 536 ctccagaactaaacccaatatgag 559
            |||||||| || |||| ||||||
Sbjct: 72  ttccagaaccaaccccagtatgag 49
to top
>emb|Z13008.1|HVBHORD H.vulgare mRNA for beta-hordothionin
          Length = 535

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 505 tgcagcaactcttgccttctacttggacctgctccagaactaaacccaatatgag 559
           ||||||||||||||||||||||||| || || |||||||| || |||| ||||||
Sbjct: 127 tgcagcaactcttgccttctacttgcacatgttccagaaccaaccccagtatgag 73
to top
>emb|X05901.1|HVTH1AR Barley mRNA for toxin alpha-hordothionin
          Length = 569

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                       
Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 535
           ||||||||||||||| ||    ||| || ||||||||||||||||||||||||| |||||
Sbjct: 107 gttgtagcagtttcttcctagggtgctcctgcagcaactcttgccttctacttgcacctg 48

                    
Query: 536 ctccagaac 544
            || |||||
Sbjct: 47  ttcgagaac 39
to top
>gb|M23080.1|BLYHORA Hordeum vulgare alpha-hordothionin (Hth-1) gene, complete cds
          Length = 1805

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                       
Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 535
           ||||||||||||||| ||    ||| || ||||||||||||||||||||||||| |||||
Sbjct: 485 gttgtagcagtttcttcctagggtgctcctgcagcaactcttgccttctacttgcacctg 426

                    
Query: 536 ctccagaac 544
            || |||||
Sbjct: 425 ttcgagaac 417
to top
>emb|X96446.1|TACSPUR1B T.aestivum Pur-B1 gene, cultivar Chinese Spring
          Length = 888

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 70/84 (83%)
 Strand = Plus / Minus

                                                                       
Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 535
           ||||||||||||||| |||   ||| || ||||||| |||||||||||||| || | |||
Sbjct: 132 gttgtagcagtttcttcccagggtgctcctgcagcagctcttgccttctacctgcagctg 73

                                   
Query: 536 ctccagaactaaacccaatatgag 559
            |||||||| || |||| ||||||
Sbjct: 72  ttccagaaccaaccccagtatgag 49
to top
>emb|X70666.1|TAPURD1A T.aestivum mRNA for alpha2-purothionin
          Length = 567

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 70/84 (83%)
 Strand = Plus / Minus

                                                                       
Query: 476 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 535
           ||||||||||||||| |||   ||| || ||||||| |||||||||||||| || | |||
Sbjct: 91  gttgtagcagtttcttcccagggtgctcctgcagcagctcttgccttctacctgcagctg 32

                                   
Query: 536 ctccagaactaaacccaatatgag 559
            |||||||| || |||| ||||||
Sbjct: 31  ttccagaaccaaccccagtatgag 8
to top
>gb|AC149153.3| Xenopus tropicalis clone ISB-221D20, complete sequence
          Length = 58609

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 62   aaaaaacagaaatacataact 82
            |||||||||||||||||||||
Sbjct: 8230 aaaaaacagaaatacataact 8210
to top
>gb|AC121276.9| Mus musculus chromosome 1, clone RP24-249B16, complete sequence
          Length = 212083

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 609   tggttggccttaatttctcaa 629
             |||||||||||||||||||||
Sbjct: 89657 tggttggccttaatttctcaa 89637
to top
>gb|AC004927.2| Homo sapiens PAC clone RP5-910I17 from 7, complete sequence
          Length = 80105

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 86    ccatcattacagaaaatgaca 106
             |||||||||||||||||||||
Sbjct: 54815 ccatcattacagaaaatgaca 54835
to top
>gb|AC147271.3| Pan troglodytes BAC clone RP43-121F15 from chromosome 7, complete
            sequence
          Length = 180569

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 86   ccatcattacagaaaatgaca 106
            |||||||||||||||||||||
Sbjct: 5632 ccatcattacagaaaatgaca 5612
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 122     caagattgttgaacagaaaat 142
               |||||||||||||||||||||
Sbjct: 6740764 caagattgttgaacagaaaat 6740784
to top
>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence
          Length = 209156

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 291   ttgtccatgttgtcacaaacggaag 315
             ||||||||||||||||||| |||||
Sbjct: 87238 ttgtccatgttgtcacaaatggaag 87262
to top
>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1131G07
          Length = 133992

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 122   caagattgttgaacagaaaat 142
             |||||||||||||||||||||
Sbjct: 61817 caagattgttgaacagaaaat 61837
to top
>gb|AC115728.11| Mus musculus chromosome 5, clone RP23-31J24, complete sequence
          Length = 211351

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     atcattacagaaaatgacaa 107
              ||||||||||||||||||||
Sbjct: 160801 atcattacagaaaatgacaa 160820
to top
>ref|NG_005425.2| Homo sapiens PHF5A pseudogene 6 (LOC450250) on chromosome 15
          Length = 1523

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 497 cgtgttcttgcagcaactct 516
           ||||||||||||||||||||
Sbjct: 947 cgtgttcttgcagcaactct 966
to top
>gb|AC108951.4| Mus musculus BAC clone RP24-136D23 from 3, complete sequence
          Length = 148219

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 2      ttttatattaagnccagggtata 24
              |||||||||||| ||||||||||
Sbjct: 109864 ttttatattaagaccagggtata 109842
to top
>gb|AC015712.10| Homo sapiens chromosome 15, clone RP11-66B24, complete sequence
          Length = 173428

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 497   cgtgttcttgcagcaactct 516
             ||||||||||||||||||||
Sbjct: 54209 cgtgttcttgcagcaactct 54190
to top
>emb|AL161899.21| Human DNA sequence from clone RP11-418I10 on chromosome 13, complete
              sequence
          Length = 159981

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 579    ttaatactcttgttggttgc 598
              ||||||||||||||||||||
Sbjct: 131995 ttaatactcttgttggttgc 131976
to top
>emb|AL139801.17| Human DNA sequence from clone RP11-247M1 on chromosome 13 Contains a
             novel FLJ21562 containing gene, a novel gene, a novel
             pseudogene and a CpG island, complete sequence
          Length = 145481

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 607   gctggttggccttaatttct 626
             ||||||||||||||||||||
Sbjct: 89214 gctggttggccttaatttct 89195
to top
>emb|AL646095.27| Mouse DNA sequence from clone RP23-17P18 on chromosome 11 Contains the
             3' end of the Asb3 gene for ankyrin repeat and SOCS
             box-containing protein 3 and two zinc finger protein
             pseudogenes, complete sequence
          Length = 173655

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    cattacagaaaatgacaaaa 109
             ||||||||||||||||||||
Sbjct: 18597 cattacagaaaatgacaaaa 18616
to top
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 594     gttgccatggttggctggtt 613
               ||||||||||||||||||||
Sbjct: 1035668 gttgccatggttggctggtt 1035649
to top
>gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, complete sequence
          Length = 175838

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 547    aacccaatatgagaacacaa 566
              ||||||||||||||||||||
Sbjct: 112938 aacccaatatgagaacacaa 112957
to top
>gb|AC153659.4| Mus musculus BAC clone RP23-283A3 from chromosome 3, complete sequence
          Length = 220855

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 2      ttttatattaagnccagggtata 24
              |||||||||||| ||||||||||
Sbjct: 203123 ttttatattaagaccagggtata 203101
to top
>gb|AC026188.6| Homo sapiens chromosome 3 clone RP11-319I18 map 3p, complete sequence
          Length = 177721

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    aagattgttgaacagaaaat 142
              ||||||||||||||||||||
Sbjct: 113658 aagattgttgaacagaaaat 113677
to top
>gb|AC097482.2| Homo sapiens BAC clone RP11-131L11 from 4, complete sequence
          Length = 160763

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 619   taatttctcaagtagaatga 638
             ||||||||||||||||||||
Sbjct: 11306 taatttctcaagtagaatga 11325
to top
>gb|AC154857.2| Mus musculus BAC clone RP23-16K21 from chromosome 13, complete sequence
          Length = 214859

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    atcattacagaaaatgacaa 107
             ||||||||||||||||||||
Sbjct: 35358 atcattacagaaaatgacaa 35339
to top
>gb|AY128102.1| Lycopersicon esculentum isolate vis1-lta small heat shock protein
            (vis1) gene, complete cds
          Length = 2257

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 43   actcttattggaacgagggaaaaa 66
            |||||||||||||||| |||||||
Sbjct: 1736 actcttattggaacgaaggaaaaa 1713
to top
>gb|AY128101.1| Lycopersicon esculentum isolate vis1-hta small heat shock protein
            (vis1) gene, complete cds
          Length = 2224

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 43   actcttattggaacgagggaaaaa 66
            |||||||||||||||| |||||||
Sbjct: 1703 actcttattggaacgaaggaaaaa 1680
to top
>gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6, complete sequence
          Length = 172551

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 547   aacccaatatgagaacacaa 566
             ||||||||||||||||||||
Sbjct: 31644 aacccaatatgagaacacaa 31663
to top
>gb|AC008498.3|AC008498 Homo sapiens chromosome 5 clone CTC-436P18, complete sequence
          Length = 217898

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     aaaaaacagaaatacataac 81
              ||||||||||||||||||||
Sbjct: 161134 aaaaaacagaaatacataac 161153
to top
>dbj|BS000023.1| Pan troglodytes chromosome 22 clone:PTB-018G23, map 22, complete
             sequences
          Length = 135513

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   ttgtccatgttgtcacaaac 310
             ||||||||||||||||||||
Sbjct: 53181 ttgtccatgttgtcacaaac 53200
to top
>gb|AC113036.8| Mus musculus chromosome 13, clone RP23-223B10, complete sequence
          Length = 190133

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     atcattacagaaaatgacaa 107
              ||||||||||||||||||||
Sbjct: 168976 atcattacagaaaatgacaa 168957
to top
>gb|AC150897.2| Mus musculus BAC clone RP23-289F7 from 7, complete sequence
          Length = 227073

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     aaaaaacagaaatacataac 81
              ||||||||||||||||||||
Sbjct: 101064 aaaaaacagaaatacataac 101083
to top
>gb|AY487430.1| Uncultured organism clone 2A15 nitrilase (BD5338) gene, complete
           cds
          Length = 1047

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 153 ccttggccatagaaatcatgccca 176
           |||||||||| |||||||||||||
Sbjct: 862 ccttggccattgaaatcatgccca 839
to top
>emb|AL591882.12| Mouse DNA sequence from clone RP23-53L16 on chromosome 2, complete
             sequence
          Length = 251814

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 621   atttctcaagtagaatgagc 640
             ||||||||||||||||||||
Sbjct: 20803 atttctcaagtagaatgagc 20822
to top
>gb|AC068314.6| Homo sapiens chromosome 3 clone RP11-194D21 map 3p, complete sequence
          Length = 179814

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 123  aagattgttgaacagaaaat 142
            ||||||||||||||||||||
Sbjct: 3697 aagattgttgaacagaaaat 3716


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,717,001
Number of Sequences: 3902068
Number of extensions: 5717001
Number of successful extensions: 108379
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108193
Number of HSP's gapped (non-prelim): 175
length of query: 640
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 617
effective length of database: 17,143,297,704
effective search space: 10577414683368
effective search space used: 10577414683368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top