>Y1993_PSEAE (Q9I2B6) UPF0226 protein PA1993|
          Length = 402

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -1

Query: 142 GAVVVK-LNYWSAPFC*VAFSVLGFALSLPQL---LVHGRVRPF 23
           G ++V+ L  WS     V    LGFAL+ P+L   LVHG   PF
Sbjct: 174 GVLLVQWLGLWSMGASIVLLGALGFALAWPKLPAPLVHGERLPF 217

>DPOG2_HUMAN (Q9UHN1) DNA polymerase gamma subunit 2, mitochondrial precursor|
           (EC 2.7.7.7) (Mitochondrial DNA polymerase accessory
           subunit) (PolG-beta) (MtPolB) (DNA polymerase gamma
           accessory 55 kDa subunit) (p55)
          Length = 485

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
 Frame = -3

Query: 206 GQXPDAPCR---KEEA*EVLIRGKWSSSCKTELLERSILLGCIFGF---GVCLEFATAAR 45
           G+ P+AP      E   E+  R  + S  K +L   S+L GC  GF   GV L    AA 
Sbjct: 54  GEHPEAPGSGEGSEALLEICQRRHFLSGSKQQLSRDSLLSGCHPGFGPLGVELRKNLAAE 113

Query: 44  PWTCPSVPYQQI 9
            WT   V  +Q+
Sbjct: 114 WWTSVVVFREQV 125

>NING_BPH19 (O48427) Protein ninG|
          Length = 201

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +2

Query: 71  KPQNRKCNLT-EWSAPIIQFYNYCSTSHGSK 160
           KP  RKC +  EW  P      +CS  HG+K
Sbjct: 3   KPARRKCKICKEWFHPAFSNQWWCSPEHGTK 33

>SPP1_YEAST (Q03012) COMPASS component SPP1 (Complex proteins associated with|
           SET1 protein SPP1) (Set1C component SPP1) (Suppressor of
           PRP protein 1)
          Length = 353

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 38  SMDEQLWQTQGKPQNRKCNLTEWSAPIIQFYNYCSTSHG 154
           S+ + LW+       RKC +++   P +Q   YCS  HG
Sbjct: 87  SLPKTLWK-------RKCRISDCYKPCLQDSKYCSEEHG 118

>SPP1_SCHPO (O74508) Set1 complex component spp1 (Set1C component spp1)|
           (COMPASS component spp1) (Complex proteins associated
           with set1 protein spp1)
          Length = 424

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = +2

Query: 83  RKCNLTEWSAPIIQFYNYCSTSHG 154
           RKC L E S P     NYCS  HG
Sbjct: 177 RKCRLRECSNPTRPNSNYCSDKHG 200

>Y481_TREPA (O83494) Hypothetical protein TP0481|
          Length = 477

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +3

Query: 207 PKCPSRGEGHAGNRSTSHGYRCTRH 281
           PK PSR   H G R T H + C R+
Sbjct: 7   PKTPSRRIRHTGRRRTLHRFFCKRY 31

>Y1684_METTH (O27719) Hypothetical protein MTH1684|
          Length = 431

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -3

Query: 131 CKTELLERSILLGCIFGFGVCLEFATAARPWTCPSVPYQ 15
           C T  ++  + L   FG GVC         W+CPS  Y+
Sbjct: 357 CPTHAIDNGLDLDRCFGCGVC--------AWSCPSGAYE 387

>YBL2_SFV1 (P29170) BEL-2 protein|
          Length = 403

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 53  LWQTQGKPQNRKCNLTEWSAP 115
           LWQ  G P  RKC +T++  P
Sbjct: 92  LWQCLGDPSGRKCMVTQFLLP 112


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,871,443
Number of Sequences: 219361
Number of extensions: 984290
Number of successful extensions: 2451
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2451
length of database: 80,573,946
effective HSP length: 95
effective length of database: 59,734,651
effective search space used: 1433631624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)