ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal13i23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 212 1e-51
2gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome... 212 1e-51
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 212 1e-51
4dbj|AK066591.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 1e-51
5ref|XM_470256.1| Oryza sativa (japonica cultivar-group), predic... 208 1e-50
6gb|AY112221.1| Zea mays CL58622_1 mRNA sequence 198 1e-47
7gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
8gb|AF333066.1| Anguillid herpesvirus polymerase gene, partial cds 42 2.0
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
10emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 42 2.0
11gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
12ref|XM_468503.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.9
13ref|XM_463635.1| Oryza sativa (japonica cultivar-group), predic... 40 7.9
14ref|XM_463632.1| Oryza sativa (japonica cultivar-group), predic... 40 7.9
15gb|AY208917.2| Pseudomonas sp. ND6 plasmid pND6-1, complete sequ... 40 7.9
16gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 7.9
17ref|XM_581852.2| PREDICTED: Bos taurus similar to Epsin-3 (EPS-1... 40 7.9
18gb|AC124181.3| Mus musculus BAC clone RP23-204B12 from chromosom... 40 7.9
19gb|BC065225.1| Homo sapiens cDNA clone MGC:74678 IMAGE:5724414, ... 40 7.9
20emb|X61927.1|PCPPC1 P.cepacia plasmid PPC1 DNA 40 7.9
21gb|BC016784.1| Homo sapiens hypothetical protein BC017868, mRNA ... 40 7.9
22gb|BC112775.1| Bos taurus similar to Epsin-3 (EPS-15 interacting... 40 7.9
23emb|AL691477.9| Human DNA sequence from clone RP1-188K21 on chro... 40 7.9
24emb|AL645803.19| Mouse DNA sequence from clone RP23-119N24 on ch... 40 7.9
25emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome... 40 7.9
26emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 7.9
27dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
28gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.9
29gb|AC008860.7| Homo sapiens chromosome 5 clone CTD-2185A1, compl... 40 7.9
30gb|AC008577.7| Homo sapiens chromosome 5 clone CTC-558D17, compl... 40 7.9
31gb|AC011208.5|AC011208 Homo sapiens chromosome 18, clone RP11-13... 40 7.9
32dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
33dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
34dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
35dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
36dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
37dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
38dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
39gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.9
40gb|AC112204.2| Homo sapiens chromosome 5 clone RP11-79C6, comple... 40 7.9
41dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
42gb|AE004994.1| Halobacterium sp. NRC-1 section 25 of 170 of the ... 40 7.9
43ref|XM_561331.1| Anopheles gambiae str. PEST ENSANGP00000025558 ... 40 7.9
44dbj|AK099149.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
45dbj|AK099125.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
46dbj|AK071688.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
47dbj|AK069159.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
48dbj|AK060332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
49dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
50gb|AY859695.1| Mycobacterium conceptionae CIP 108544 RNA polymer... 40 7.9
51gb|AC006924.3|AC006924 Homo sapiens, clone hRPK.32_A_1, complete... 40 7.9
52gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 7.9
53gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
54emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.9
55emb|AL606654.3|OSJN00100 Oryza sativa genomic DNA, chromosome 4,... 40 7.9
56gb|AC132130.3| Mus musculus BAC clone RP23-324D11 from 18, compl... 40 7.9
57gb|AD000012.1|MSGY126 Mycobacterium tuberculosis sequence from c... 40 7.9 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  212 bits (107), Expect = 1e-51
 Identities = 173/195 (88%)
 Strand = Plus / Plus

                                                                           
Query: 188     agttacaagttgtcgtgctcgatgacctgcgcccccctccactcctcgccggggccgacg 247
               ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||
Sbjct: 3102212 agttacaggttgtcgtgctcgatgacctgcgccgccctccactcctcgccggggttgacg 3102271

                                                                           
Query: 248     acgacgggcacgaggatggacgccggcccggtgcagaggaagtagtcgttgccgaacttg 307
               || || ||||| || |||||||||| ||||||||| ||||||||||| ||||||||||| 
Sbjct: 3102272 accaccggcaccagcatggacgccgtcccggtgcacaggaagtagtccttgccgaacttc 3102331

                                                                           
Query: 308     tcgtacattcctcctgggctgcccaggtacatgtcctcgaaccccatcctcacaagcctg 367
                 ||||||  | || ||||||| |||||||||||||||| ||||||||||||| | ||||
Sbjct: 3102332 ctgtacatctcccccgggctgcacaggtacatgtcctcgtaccccatcctcaccaccctg 3102391

                              
Query: 368     aaccccagcccgcta 382
               |||||||||||||||
Sbjct: 3102392 aaccccagcccgcta 3102406



 Score =  184 bits (93), Expect = 2e-43
 Identities = 114/121 (94%)
 Strand = Plus / Plus

                                                                           
Query: 458     acctggtcgatggtggtgaacttggagggcgcggtgttgtagatgcgcttcttcctctcc 517
               ||||| || ||||||||||| ||||||||||| ||| |||||||||||||||||||||||
Sbjct: 3102896 acctgatcaatggtggtgaatttggagggcgccgtgctgtagatgcgcttcttcctctcc 3102955

                                                                           
Query: 518     tccggcggcgccgcgtacaccctgctcaccttcttcttgaggatggtgtagaggttctcc 577
               |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3102956 tccggcggggccgcgtacaccctgctcaccttcttcttgaggatggtgtagaggttgtcc 3103015

                
Query: 578     t 578
               |
Sbjct: 3103016 t 3103016



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 501      tgcgcttcttcctctcctcc 520
                ||||||||||||||||||||
Sbjct: 13764944 tgcgcttcttcctctcctcc 13764925
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>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05,
             complete sequence
          Length = 101799

 Score =  212 bits (107), Expect = 1e-51
 Identities = 173/195 (88%)
 Strand = Plus / Plus

                                                                         
Query: 188   agttacaagttgtcgtgctcgatgacctgcgcccccctccactcctcgccggggccgacg 247
             ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||
Sbjct: 25225 agttacaggttgtcgtgctcgatgacctgcgccgccctccactcctcgccggggttgacg 25284

                                                                         
Query: 248   acgacgggcacgaggatggacgccggcccggtgcagaggaagtagtcgttgccgaacttg 307
             || || ||||| || |||||||||| ||||||||| ||||||||||| ||||||||||| 
Sbjct: 25285 accaccggcaccagcatggacgccgtcccggtgcacaggaagtagtccttgccgaacttc 25344

                                                                         
Query: 308   tcgtacattcctcctgggctgcccaggtacatgtcctcgaaccccatcctcacaagcctg 367
               ||||||  | || ||||||| |||||||||||||||| ||||||||||||| | ||||
Sbjct: 25345 ctgtacatctcccccgggctgcacaggtacatgtcctcgtaccccatcctcaccaccctg 25404

                            
Query: 368   aaccccagcccgcta 382
             |||||||||||||||
Sbjct: 25405 aaccccagcccgcta 25419



 Score =  184 bits (93), Expect = 2e-43
 Identities = 114/121 (94%)
 Strand = Plus / Plus

                                                                         
Query: 458   acctggtcgatggtggtgaacttggagggcgcggtgttgtagatgcgcttcttcctctcc 517
             ||||| || ||||||||||| ||||||||||| ||| |||||||||||||||||||||||
Sbjct: 25909 acctgatcaatggtggtgaatttggagggcgccgtgctgtagatgcgcttcttcctctcc 25968

                                                                         
Query: 518   tccggcggcgccgcgtacaccctgctcaccttcttcttgaggatggtgtagaggttctcc 577
             |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 25969 tccggcggggccgcgtacaccctgctcaccttcttcttgaggatggtgtagaggttgtcc 26028

              
Query: 578   t 578
             |
Sbjct: 26029 t 26029
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  212 bits (107), Expect = 1e-51
 Identities = 173/195 (88%)
 Strand = Plus / Plus

                                                                           
Query: 188     agttacaagttgtcgtgctcgatgacctgcgcccccctccactcctcgccggggccgacg 247
               ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||
Sbjct: 3102323 agttacaggttgtcgtgctcgatgacctgcgccgccctccactcctcgccggggttgacg 3102382

                                                                           
Query: 248     acgacgggcacgaggatggacgccggcccggtgcagaggaagtagtcgttgccgaacttg 307
               || || ||||| || |||||||||| ||||||||| ||||||||||| ||||||||||| 
Sbjct: 3102383 accaccggcaccagcatggacgccgtcccggtgcacaggaagtagtccttgccgaacttc 3102442

                                                                           
Query: 308     tcgtacattcctcctgggctgcccaggtacatgtcctcgaaccccatcctcacaagcctg 367
                 ||||||  | || ||||||| |||||||||||||||| ||||||||||||| | ||||
Sbjct: 3102443 ctgtacatctcccccgggctgcacaggtacatgtcctcgtaccccatcctcaccaccctg 3102502

                              
Query: 368     aaccccagcccgcta 382
               |||||||||||||||
Sbjct: 3102503 aaccccagcccgcta 3102517



 Score =  184 bits (93), Expect = 2e-43
 Identities = 114/121 (94%)
 Strand = Plus / Plus

                                                                           
Query: 458     acctggtcgatggtggtgaacttggagggcgcggtgttgtagatgcgcttcttcctctcc 517
               ||||| || ||||||||||| ||||||||||| ||| |||||||||||||||||||||||
Sbjct: 3103007 acctgatcaatggtggtgaatttggagggcgccgtgctgtagatgcgcttcttcctctcc 3103066

                                                                           
Query: 518     tccggcggcgccgcgtacaccctgctcaccttcttcttgaggatggtgtagaggttctcc 577
               |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3103067 tccggcggggccgcgtacaccctgctcaccttcttcttgaggatggtgtagaggttgtcc 3103126

                
Query: 578     t 578
               |
Sbjct: 3103127 t 3103127



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 501      tgcgcttcttcctctcctcc 520
                ||||||||||||||||||||
Sbjct: 13759919 tgcgcttcttcctctcctcc 13759900
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>dbj|AK066591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073D03, full
            insert sequence
          Length = 1341

 Score =  212 bits (107), Expect = 1e-51
 Identities = 173/195 (88%)
 Strand = Plus / Minus

                                                                        
Query: 188  agttacaagttgtcgtgctcgatgacctgcgcccccctccactcctcgccggggccgacg 247
            ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||
Sbjct: 1127 agttacaggttgtcgtgctcgatgacctgcgccgccctccactcctcgccggggttgacg 1068

                                                                        
Query: 248  acgacgggcacgaggatggacgccggcccggtgcagaggaagtagtcgttgccgaacttg 307
            || || ||||| || |||||||||| ||||||||| ||||||||||| ||||||||||| 
Sbjct: 1067 accaccggcaccagcatggacgccgtcccggtgcacaggaagtagtccttgccgaacttc 1008

                                                                        
Query: 308  tcgtacattcctcctgggctgcccaggtacatgtcctcgaaccccatcctcacaagcctg 367
              ||||||  | || ||||||| |||||||||||||||| ||||||||||||| | ||||
Sbjct: 1007 ctgtacatctcccccgggctgcacaggtacatgtcctcgtaccccatcctcaccaccctg 948

                           
Query: 368  aaccccagcccgcta 382
            |||||||||||||||
Sbjct: 947  aaccccagcccgcta 933



 Score =  182 bits (92), Expect = 8e-43
 Identities = 107/112 (95%)
 Strand = Plus / Minus

                                                                       
Query: 467 atggtggtgaacttggagggcgcggtgttgtagatgcgcttcttcctctcctccggcggc 526
           ||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| 
Sbjct: 923 atggtggtgaatttggagggcgccgtgctgtagatgcgcttcttcctctcctccggcggg 864

                                                               
Query: 527 gccgcgtacaccctgctcaccttcttcttgaggatggtgtagaggttctcct 578
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 863 gccgcgtacaccctgctcaccttcttcttgaggatggtgtagaggttgtcct 812
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>ref|XM_470256.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1200

 Score =  208 bits (105), Expect = 1e-50
 Identities = 171/193 (88%)
 Strand = Plus / Minus

                                                                        
Query: 190  ttacaagttgtcgtgctcgatgacctgcgcccccctccactcctcgccggggccgacgac 249
            ||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||||||
Sbjct: 1200 ttacaggttgtcgtgctcgatgacctgcgccgccctccactcctcgccggggttgacgac 1141

                                                                        
Query: 250  gacgggcacgaggatggacgccggcccggtgcagaggaagtagtcgttgccgaacttgtc 309
             || ||||| || |||||||||| ||||||||| ||||||||||| |||||||||||   
Sbjct: 1140 caccggcaccagcatggacgccgtcccggtgcacaggaagtagtccttgccgaacttcct 1081

                                                                        
Query: 310  gtacattcctcctgggctgcccaggtacatgtcctcgaaccccatcctcacaagcctgaa 369
            ||||||  | || ||||||| |||||||||||||||| ||||||||||||| | ||||||
Sbjct: 1080 gtacatctcccccgggctgcacaggtacatgtcctcgtaccccatcctcaccaccctgaa 1021

                         
Query: 370  ccccagcccgcta 382
            |||||||||||||
Sbjct: 1020 ccccagcccgcta 1008



 Score =  182 bits (92), Expect = 8e-43
 Identities = 107/112 (95%)
 Strand = Plus / Minus

                                                                       
Query: 467 atggtggtgaacttggagggcgcggtgttgtagatgcgcttcttcctctcctccggcggc 526
           ||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| 
Sbjct: 998 atggtggtgaatttggagggcgccgtgctgtagatgcgcttcttcctctcctccggcggg 939

                                                               
Query: 527 gccgcgtacaccctgctcaccttcttcttgaggatggtgtagaggttctcct 578
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 938 gccgcgtacaccctgctcaccttcttcttgaggatggtgtagaggttgtcct 887
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>gb|AY112221.1| Zea mays CL58622_1 mRNA sequence
          Length = 883

 Score =  198 bits (100), Expect = 1e-47
 Identities = 172/196 (87%)
 Strand = Plus / Plus

                                                                       
Query: 192 acaagttgtcgtgctcgatgacctgcgcccccctccactcctcgccggggccgacgacga 251
           |||||||||| ||||| |||||||||||| || |||||||||||||||||  |||||| |
Sbjct: 137 acaagttgtcatgctctatgacctgcgccgccttccactcctcgccggggttgacgacaa 196

                                                                       
Query: 252 cgggcacgaggatggacgccggcccggtgcagaggaagtagtcgttgccgaacttgtcgt 311
           ||||||| |  |||||||||  ||| ||||| || |||||||| |||||||||||| |||
Sbjct: 197 cgggcaccaacatggacgccatccccgtgcacagaaagtagtccttgccgaacttggcgt 256

                                                                       
Query: 312 acattcctcctgggctgcccaggtacatgtcctcgaaccccatcctcacaagcctgaacc 371
           |||| ||||| |||||||  ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 257 acatgcctcccgggctgcagaggtacatgtcctcgaaccccatcctcaccagcctgaacc 316

                           
Query: 372 ccagcccgctagactg 387
           | ||||||||| ||||
Sbjct: 317 cgagcccgctatactg 332



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 476 aacttggagggcgcggtgttgtagatgcgcttcttcctctcctccggcggcgc 528
           |||||||| ||||||||| |||||| |||||||||||||||||||  ||||||
Sbjct: 346 aacttggacggcgcggtgctgtagacgcgcttcttcctctcctccnncggcgc 398
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>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
            OSJNBa0074L11, complete sequence
          Length = 180703

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 106  atgggtggttacaagattcat 126
            |||||||||||||||||||||
Sbjct: 6582 atgggtggttacaagattcat 6602
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>gb|AF333066.1| Anguillid herpesvirus polymerase gene, partial cds
          Length = 463

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 556 gaggatggtgtagaggttctc 576
           |||||||||||||||||||||
Sbjct: 172 gaggatggtgtagaggttctc 152
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 106      atgggtggttacaagattcat 126
                |||||||||||||||||||||
Sbjct: 21654529 atgggtggttacaagattcat 21654549
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 233     tcgccggggccgacgacgacg 253
               |||||||||||||||||||||
Sbjct: 1435716 tcgccggggccgacgacgacg 1435696
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 106      atgggtggttacaagattcat 126
                |||||||||||||||||||||
Sbjct: 21964728 atgggtggttacaagattcat 21964748
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>ref|XM_468503.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2037

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 cgccggggccgacgacgacg 253
           ||||||||||||||||||||
Sbjct: 213 cgccggggccgacgacgacg 232
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>ref|XM_463635.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1119

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 505  cttcttcctctcctccggcg 524
            ||||||||||||||||||||
Sbjct: 1047 cttcttcctctcctccggcg 1028
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>ref|XM_463632.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1110

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 505  cttcttcctctcctccggcggcgc 528
            |||||||||| |||||||||||||
Sbjct: 1029 cttcttcctcccctccggcggcgc 1006
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>gb|AY208917.2| Pseudomonas sp. ND6 plasmid pND6-1, complete sequence
          Length = 101858

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 426   tgacgacgatcattcatcca 445
             ||||||||||||||||||||
Sbjct: 45091 tgacgacgatcattcatcca 45110
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 240     ggccgacgacgacgggcacg 259
               ||||||||||||||||||||
Sbjct: 4220932 ggccgacgacgacgggcacg 4220951
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>ref|XM_581852.2| PREDICTED: Bos taurus similar to Epsin-3 (EPS-15 interacting
           protein 3) (LOC538660), mRNA
          Length = 1908

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 558 ggatggtgtagaggttctcc 577
           ||||||||||||||||||||
Sbjct: 310 ggatggtgtagaggttctcc 291
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>gb|AC124181.3| Mus musculus BAC clone RP23-204B12 from chromosome 18, complete sequence
          Length = 220244

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     atctactccatgtgtacata 96
              ||||||||||||||||||||
Sbjct: 182633 atctactccatgtgtacata 182652
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>gb|BC065225.1| Homo sapiens cDNA clone MGC:74678 IMAGE:5724414, complete cds
          Length = 860

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 26  ttcttgagcaattcatctgt 45
           ||||||||||||||||||||
Sbjct: 440 ttcttgagcaattcatctgt 459
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>emb|X61927.1|PCPPC1 P.cepacia plasmid PPC1 DNA
          Length = 1641

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 201 cgtgctcgatgacctgcgcc 220
           ||||||||||||||||||||
Sbjct: 291 cgtgctcgatgacctgcgcc 272
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>gb|BC016784.1| Homo sapiens hypothetical protein BC017868, mRNA (cDNA clone
           IMAGE:4072765), partial cds
          Length = 2091

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 26  ttcttgagcaattcatctgt 45
           ||||||||||||||||||||
Sbjct: 666 ttcttgagcaattcatctgt 685
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>gb|BC112775.1| Bos taurus similar to Epsin-3 (EPS-15 interacting protein 3), mRNA
           (cDNA clone MGC:137304 IMAGE:8179488), complete cds
          Length = 2598

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 558 ggatggtgtagaggttctcc 577
           ||||||||||||||||||||
Sbjct: 690 ggatggtgtagaggttctcc 671
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>emb|AL691477.9| Human DNA sequence from clone RP1-188K21 on chromosome X Contains 5'
             end of the LOC169090 gene, the 5' end of the LOC159091
             gene and a CpG island, complete sequence
          Length = 49349

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    ttcttgagcaattcatctgt 45
             ||||||||||||||||||||
Sbjct: 44362 ttcttgagcaattcatctgt 44381
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>emb|AL645803.19| Mouse DNA sequence from clone RP23-119N24 on chromosome 11 Contains the
             5' end of the Ddc gene for dopa decarboxylase, a novel
             gene and the 3' end of the Grb10 gene for growth factor
             receptor bound protein 10, complete sequence
          Length = 128744

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   tttgagaatgtacatgattt 154
             ||||||||||||||||||||
Sbjct: 30952 tttgagaatgtacatgattt 30971
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>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13
          Length = 244800

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   ggccgacgacgacgggcacg 259
             ||||||||||||||||||||
Sbjct: 61887 ggccgacgacgacgggcacg 61906
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>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             14/14
          Length = 278492

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   ggccgacgacgacgggcacg 259
             ||||||||||||||||||||
Sbjct: 97914 ggccgacgacgacgggcacg 97933
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>dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:OJ1485_B09
          Length = 66599

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 505  cttcttcctctcctccggcg 524
            ||||||||||||||||||||
Sbjct: 5433 cttcttcctctcctccggcg 5414
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>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0048D11, from chromosome 3, complete sequence
          Length = 158911

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 501   tgcgcttcttcctctcctcc 520
             ||||||||||||||||||||
Sbjct: 41472 tgcgcttcttcctctcctcc 41453
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>gb|AC008860.7| Homo sapiens chromosome 5 clone CTD-2185A1, complete sequence
          Length = 105885

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 540   tgctcaccttcttcttgaggatggtgta 567
             |||||| ||| |||||||||||||||||
Sbjct: 77846 tgctcaactttttcttgaggatggtgta 77873
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>gb|AC008577.7| Homo sapiens chromosome 5 clone CTC-558D17, complete sequence
          Length = 77686

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   cctcgaaccccatcctcaca 361
             ||||||||||||||||||||
Sbjct: 40351 cctcgaaccccatcctcaca 40370
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>gb|AC011208.5|AC011208 Homo sapiens chromosome 18, clone RP11-131K21, complete sequence
          Length = 181602

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   aagcctgaaccccagcccgc 380
             ||||||||||||||||||||
Sbjct: 89204 aagcctgaaccccagcccgc 89185
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 276     cggtgcagaggaagtagtcg 295
               ||||||||||||||||||||
Sbjct: 4200788 cggtgcagaggaagtagtcg 4200807
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 505      cttcttcctctcctccggcg 524
                ||||||||||||||||||||
Sbjct: 22977256 cttcttcctctcctccggcg 22977237
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 510      tcctctcctccggcggcgcc 529
                ||||||||||||||||||||
Sbjct: 26217560 tcctctcctccggcggcgcc 26217579
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 234      cgccggggccgacgacgacg 253
                ||||||||||||||||||||
Sbjct: 35572573 cgccggggccgacgacgacg 35572592
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 505      cttcttcctctcctccggcg 524
                ||||||||||||||||||||
Sbjct: 40206481 cttcttcctctcctccggcg 40206462



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 505      cttcttcctctcctccggcggcgc 528
                |||||||||| |||||||||||||
Sbjct: 40196869 cttcttcctcccctccggcggcgc 40196846
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>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0678F11
          Length = 154292

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 505    cttcttcctctcctccggcg 524
              ||||||||||||||||||||
Sbjct: 149565 cttcttcctctcctccggcg 149546



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 505    cttcttcctctcctccggcggcgc 528
              |||||||||| |||||||||||||
Sbjct: 139953 cttcttcctcccctccggcggcgc 139930
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>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1793G04
          Length = 156714

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 505   cttcttcctctcctccggcg 524
             ||||||||||||||||||||
Sbjct: 72259 cttcttcctctcctccggcg 72240



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 505   cttcttcctctcctccggcggcgc 528
             |||||||||| |||||||||||||
Sbjct: 62647 cttcttcctcccctccggcggcgc 62624
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 519    ccggcggcgccgcgtacacc 538
              ||||||||||||||||||||
Sbjct: 316851 ccggcggcgccgcgtacacc 316870
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>gb|AC112204.2| Homo sapiens chromosome 5 clone RP11-79C6, complete sequence
          Length = 165304

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 540    tgctcaccttcttcttgaggatggtgta 567
              |||||| ||| |||||||||||||||||
Sbjct: 112776 tgctcaactttttcttgaggatggtgta 112749
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>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0452F04
          Length = 171421

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   cgccggggccgacgacgacg 253
             ||||||||||||||||||||
Sbjct: 88965 cgccggggccgacgacgacg 88984
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>gb|AE004994.1| Halobacterium sp. NRC-1 section 25 of 170 of the complete genome
          Length = 15274

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 229  ctcctcgccggggccgacga 248
            ||||||||||||||||||||
Sbjct: 7360 ctcctcgccggggccgacga 7341
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>ref|XM_561331.1| Anopheles gambiae str. PEST ENSANGP00000025558
           (ENSANGG00000023121), partial mRNA
          Length = 1167

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 195 agttgtcgtgctcgatgacc 214
           ||||||||||||||||||||
Sbjct: 661 agttgtcgtgctcgatgacc 642
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>dbj|AK099149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063C05, full
           insert sequence
          Length = 934

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 505 cttcttcctctcctccggcg 524
           ||||||||||||||||||||
Sbjct: 76  cttcttcctctcctccggcg 95
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>dbj|AK099125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044P12, full
           insert sequence
          Length = 927

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 505 cttcttcctctcctccggcg 524
           ||||||||||||||||||||
Sbjct: 73  cttcttcctctcctccggcg 92
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>dbj|AK071688.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113H16, full
            insert sequence
          Length = 1334

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 505  cttcttcctctcctccggcg 524
            ||||||||||||||||||||
Sbjct: 1075 cttcttcctctcctccggcg 1056
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>dbj|AK069159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007N07, full
           insert sequence
          Length = 2037

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 234 cgccggggccgacgacgacg 253
           ||||||||||||||||||||
Sbjct: 213 cgccggggccgacgacgacg 232
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>dbj|AK060332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-B07, full
           insert sequence
          Length = 952

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 505 cttcttcctctcctccggcg 524
           ||||||||||||||||||||
Sbjct: 76  cttcttcctctcctccggcg 95
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>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0519E12
          Length = 152448

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 510    tcctctcctccggcggcgcc 529
              ||||||||||||||||||||
Sbjct: 109418 tcctctcctccggcggcgcc 109437
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>gb|AY859695.1| Mycobacterium conceptionae CIP 108544 RNA polymerase subunit B (rpoB)
            gene, complete cds
          Length = 3934

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 523  cggcgccgcgtacaccctgc 542
            ||||||||||||||||||||
Sbjct: 3425 cggcgccgcgtacaccctgc 3444
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>gb|AC006924.3|AC006924 Homo sapiens, clone hRPK.32_A_1, complete sequence
          Length = 165633

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     tccatgtgtacatacagatc 102
              ||||||||||||||||||||
Sbjct: 109651 tccatgtgtacatacagatc 109670
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 501     tgcgcttcttcctctcctccggcg 524
               ||||||||||||| ||||||||||
Sbjct: 1483557 tgcgcttcttcctgtcctccggcg 1483534
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 505      cttcttcctctcctccggcg 524
                ||||||||||||||||||||
Sbjct: 22905447 cttcttcctctcctccggcg 22905428
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>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155568

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 505   cttcttcctctcctccggcg 524
             ||||||||||||||||||||
Sbjct: 86533 cttcttcctctcctccggcg 86514
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>emb|AL606654.3|OSJN00100 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0028M18,
             complete sequence
          Length = 132854

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   cggtgcagaggaagtagtcg 295
             ||||||||||||||||||||
Sbjct: 43852 cggtgcagaggaagtagtcg 43871
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>gb|AC132130.3| Mus musculus BAC clone RP23-324D11 from 18, complete sequence
          Length = 183998

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     atctactccatgtgtacata 96
              ||||||||||||||||||||
Sbjct: 157339 atctactccatgtgtacata 157320
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>gb|AD000012.1|MSGY126 Mycobacterium tuberculosis sequence from clone y126
          Length = 37164

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   ggccgacgacgacgggcacg 259
             ||||||||||||||||||||
Sbjct: 15268 ggccgacgacgacgggcacg 15287


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,649,415
Number of Sequences: 3902068
Number of extensions: 4649415
Number of successful extensions: 105230
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104149
Number of HSP's gapped (non-prelim): 1076
length of query: 578
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 555
effective length of database: 17,143,297,704
effective search space: 9514530225720
effective search space used: 9514530225720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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